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Overview

ID MAG04573
Name YHH3_bin.36
Sample SMP0123
Taxonomy
Kingdom Bacteria
Phylum Desulfobacterota
Class WTBG01
Order WTBG01
Family WTBG01
Genus CALJBY01
Species
Assembly information
Completeness (%) 92.7
Contamination (%) 1.32
GC content (%) 54.0
N50 (bp) 14,447
Genome size (bp) 3,045,391

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2591

Gene name Description KEGG GOs EC E-value Score Sequence
YHH3_k127_10121347_0 PBP superfamily domain K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000324 423.0
YHH3_k127_10121347_1 Binding-protein-dependent transport system inner membrane component K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007452 282.0
YHH3_k127_10156461_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 1.322e-275 860.0
YHH3_k127_10156461_1 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 6.003e-228 731.0
YHH3_k127_10156461_10 Putative TM nitroreductase - - - 0.0000000000000000000000000000000000000000000000001693 180.0
YHH3_k127_10156461_11 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000008234 179.0
YHH3_k127_10156461_12 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000005601 160.0
YHH3_k127_10156461_13 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000001503 132.0
YHH3_k127_10156461_14 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000004019 117.0
YHH3_k127_10156461_15 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000001863 92.0
YHH3_k127_10156461_16 structural constituent of ribosome K02916 - - 0.000000000000000001901 86.0
YHH3_k127_10156461_17 Ribbon-helix-helix domain - - - 0.00000009685 55.0
YHH3_k127_10156461_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 2.11e-198 631.0
YHH3_k127_10156461_3 Type II/IV secretion system protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 486.0
YHH3_k127_10156461_4 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 471.0
YHH3_k127_10156461_5 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007007 447.0
YHH3_k127_10156461_6 PFAM glycosyl transferase group 1 K15521 - 2.4.1.250 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 379.0
YHH3_k127_10156461_7 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.0000000000000000000000000000000000000000000000000000000004576 207.0
YHH3_k127_10156461_8 ORF6N domain - - - 0.0000000000000000000000000000000000000000000000000000000008775 205.0
YHH3_k127_10156461_9 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000892 209.0
YHH3_k127_10184761_0 Protein of unknown function (DUF3417) K00688 - 2.4.1.1 2.238e-284 897.0
YHH3_k127_10184761_1 Belongs to the IlvD Edd family K01687 - 4.2.1.9 5.035e-259 808.0
YHH3_k127_10184761_10 Glycosyl transferase, family 2 K01002,K20534 - 2.7.8.20 0.0000000000000000000000000000000000000000000000000000000000000000000000007031 265.0
YHH3_k127_10184761_11 beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001792 253.0
YHH3_k127_10184761_12 NAD-dependent epimerase dehydratase K01710,K08678 - 4.1.1.35,4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000001747 217.0
YHH3_k127_10184761_13 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.00000000000000000000000000000000000000000000000000000008772 203.0
YHH3_k127_10184761_14 - K20326 - - 0.000000000000000000000000000000000000000000000000000003554 205.0
YHH3_k127_10184761_15 Protein of unknown function (DUF3047) - - - 0.00000000000000000000000000000001121 138.0
YHH3_k127_10184761_16 - - - - 0.000000000000000004408 87.0
YHH3_k127_10184761_17 Cytochrome c554 and c-prime - - - 0.000000000000001221 91.0
YHH3_k127_10184761_18 5'-nucleotidase - - - 0.000000000006788 79.0
YHH3_k127_10184761_2 DNA polymerase K02347 - - 6.163e-204 649.0
YHH3_k127_10184761_3 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 541.0
YHH3_k127_10184761_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005499 475.0
YHH3_k127_10184761_5 Rhodanese Homology Domain K01011,K21028 - 2.8.1.1,2.8.1.11,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003788 466.0
YHH3_k127_10184761_6 PFAM Radical SAM domain protein K01012 - 2.8.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 366.0
YHH3_k127_10184761_7 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 308.0
YHH3_k127_10184761_8 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004307 284.0
YHH3_k127_10184761_9 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004496 265.0
YHH3_k127_10206017_0 pyridine nucleotide-disulphide oxidoreductase dimerisation - - - 2.163e-203 647.0
YHH3_k127_10206017_1 CoA binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 564.0
YHH3_k127_10206017_10 Bacterial regulatory proteins, tetR family - - - 0.000000000000003702 83.0
YHH3_k127_10206017_11 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.000000001209 63.0
YHH3_k127_10206017_2 Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004806 529.0
YHH3_k127_10206017_3 FAD linked oxidase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 475.0
YHH3_k127_10206017_4 FAD linked oxidase domain protein K00104 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 397.0
YHH3_k127_10206017_5 Electron transfer flavoprotein FAD-binding domain K03522,K22432 - 1.3.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 291.0
YHH3_k127_10206017_6 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009266,GO:0009408,GO:0009435,GO:0009628,GO:0009987,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000004461 276.0
YHH3_k127_10206017_7 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000009879 229.0
YHH3_k127_10206017_8 electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000002455 211.0
YHH3_k127_10206017_9 Transposase and inactivated derivatives - - - 0.000000000000002651 84.0
YHH3_k127_102276_0 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 400.0
YHH3_k127_102276_1 PFAM CMP dCMP deaminase zinc-binding K01493 - 3.5.4.12 0.000000000000000000000000000000000000000000000000000000000000001352 223.0
YHH3_k127_102276_2 ATP cone domain K07738 - - 0.000000000000000000000000000000000000000000000000000000000001231 213.0
YHH3_k127_102276_3 Riboflavin synthase K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000001339 213.0
YHH3_k127_10236846_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 2.235e-217 684.0
YHH3_k127_10236846_1 PFAM Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000002645 210.0
YHH3_k127_10269381_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 4.105e-252 801.0
YHH3_k127_10269381_1 3D domain protein K21471 - - 0.0000000000000000004925 93.0
YHH3_k127_10273788_0 PFAM PfkB domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 402.0
YHH3_k127_10273788_1 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000000000000001043 194.0
YHH3_k127_10273788_2 Helix-turn-helix domain - - - 0.0000000000000000004216 98.0
YHH3_k127_10291019_0 Cytochrome c3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 557.0
YHH3_k127_10291019_1 TIGRFAM cytochrome c-type biogenesis protein CcsB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 317.0
YHH3_k127_10291019_10 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000002983 211.0
YHH3_k127_10291019_11 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000003737 206.0
YHH3_k127_10291019_12 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000468 201.0
YHH3_k127_10291019_13 anaerobic respiration - - - 0.000000000000000000000000000000000000000000000000000009554 210.0
YHH3_k127_10291019_14 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000000000000002538 210.0
YHH3_k127_10291019_15 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000003991 185.0
YHH3_k127_10291019_16 anaerobic respiration - - - 0.000000000000000000000000000000000000001347 167.0
YHH3_k127_10291019_17 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.000000000000000000000000000000000001344 158.0
YHH3_k127_10291019_18 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000894 120.0
YHH3_k127_10291019_19 amine dehydrogenase activity K21449 - - 0.00000000000000000000009216 104.0
YHH3_k127_10291019_2 Cytochrome c3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005631 312.0
YHH3_k127_10291019_20 Prokaryotic cytochrome b561 - - - 0.000000000000001096 87.0
YHH3_k127_10291019_21 Mut7-C ubiquitin - - - 0.00000000002354 65.0
YHH3_k127_10291019_23 denitrification pathway - - - 0.000000002553 70.0
YHH3_k127_10291019_24 TIGRFAM cytochrome C family protein - - - 0.000004727 59.0
YHH3_k127_10291019_3 formate dehydrogenase K00127 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 301.0
YHH3_k127_10291019_4 PFAM ResB family protein K07399 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003947 302.0
YHH3_k127_10291019_5 Involved in molybdopterin and thiamine biosynthesis, family 2 K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001023 281.0
YHH3_k127_10291019_6 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005875 283.0
YHH3_k127_10291019_7 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004999 280.0
YHH3_k127_10291019_8 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000004332 240.0
YHH3_k127_10291019_9 Phosphoglycerate mutase family K22305 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000001613 213.0
YHH3_k127_10321461_0 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005239 472.0
YHH3_k127_10321461_1 Secreted protein, containing von Willebrand factor (VWF) type - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 349.0
YHH3_k127_10321461_10 - - - - 0.00000505 58.0
YHH3_k127_10321461_2 von Willebrand factor (VWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 322.0
YHH3_k127_10321461_3 COG0811 Biopolymer transport proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 296.0
YHH3_k127_10321461_4 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000001366 252.0
YHH3_k127_10321461_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008225 256.0
YHH3_k127_10321461_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000002112 205.0
YHH3_k127_10321461_7 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000002216 128.0
YHH3_k127_10321461_8 - - - - 0.0000000000000000000000000001249 132.0
YHH3_k127_10321461_9 - - - - 0.0000000007375 65.0
YHH3_k127_10328679_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 1.139e-247 775.0
YHH3_k127_10328679_1 SecA preprotein cross-linking domain K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 3.195e-199 636.0
YHH3_k127_10328679_10 Belongs to the CDS family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.0000000000000000000000000000000000000000000001363 183.0
YHH3_k127_10328679_11 Glycoprotease family K01409,K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.00000000000000000000000000000000000000000004877 169.0
YHH3_k127_10328679_12 TIGRFAM acetolactate synthase, small subunit K01653 - 2.2.1.6 0.000000000000000000000000001016 113.0
YHH3_k127_10328679_13 Ferredoxin - GO:0003674,GO:0003824,GO:0005488,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114 - 0.0000000000000000000009118 95.0
YHH3_k127_10328679_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 419.0
YHH3_k127_10328679_3 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006779 350.0
YHH3_k127_10328679_4 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 330.0
YHH3_k127_10328679_5 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005871 322.0
YHH3_k127_10328679_6 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 313.0
YHH3_k127_10328679_7 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003453 282.0
YHH3_k127_10328679_8 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000043 259.0
YHH3_k127_10328679_9 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000003442 236.0
YHH3_k127_1034348_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 1.155e-309 981.0
YHH3_k127_1034348_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 529.0
YHH3_k127_1034348_2 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.0000000000000000000000000000000000187 137.0
YHH3_k127_1034348_3 CopG antitoxin of type II toxin-antitoxin system - - - 0.00000000000000000000000000000002017 128.0
YHH3_k127_1034348_4 nucleotidyltransferase activity - - - 0.0000000000000000000000000000009574 124.0
YHH3_k127_1034348_5 enoyl-[acyl-carrier-protein] reductase (NADH) activity - - - 0.00000000003892 69.0
YHH3_k127_1034348_6 HYR domain - - - 0.0001806 55.0
YHH3_k127_10364335_0 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 537.0
YHH3_k127_10364335_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 447.0
YHH3_k127_10364335_10 - - - - 0.000000000000000000000000000000000000009745 155.0
YHH3_k127_10364335_11 amino acid activation for nonribosomal peptide biosynthetic process K06045 - 4.2.1.129,5.4.99.17 0.0000000000000000000001841 109.0
YHH3_k127_10364335_12 bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000001272 79.0
YHH3_k127_10364335_13 Glucose / Sorbosone dehydrogenase - - - 0.00000002111 66.0
YHH3_k127_10364335_2 Dehydrogenase E1 component K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 387.0
YHH3_k127_10364335_3 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 380.0
YHH3_k127_10364335_4 ABC transporter K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001362 269.0
YHH3_k127_10364335_5 PFAM Peptidase M23 K21471 - - 0.0000000000000000000000000000000000000000000000000000004413 209.0
YHH3_k127_10364335_6 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000004808 196.0
YHH3_k127_10364335_7 Telomere recombination K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000001585 190.0
YHH3_k127_10364335_8 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.000000000000000000000000000000000000000000000002725 185.0
YHH3_k127_10364335_9 Divergent polysaccharide deacetylase K09798 - - 0.0000000000000000000000000000000000000000000002341 183.0
YHH3_k127_10396718_0 phosphate-selective porin O and P K07221 - - 0.000000000000000000000000000000000000000000000000000002833 209.0
YHH3_k127_10437237_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001055 271.0
YHH3_k127_10437237_1 Sulfatase - - - 0.00000000000000000000000000000000000000000000000002006 197.0
YHH3_k127_10437237_3 ATP hydrolysis coupled proton transport - - - 0.00000000000000008248 94.0
YHH3_k127_10510740_0 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009698 473.0
YHH3_k127_10510740_1 transferase activity, transferring glycosyl groups K00754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 310.0
YHH3_k127_10645289_0 GAD domain K01876 - 6.1.1.12 0.0 1010.0
YHH3_k127_10645289_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 7.592e-218 687.0
YHH3_k127_10645289_10 4 iron, 4 sulfur cluster binding K00338 - 1.6.5.3 0.00000000003265 66.0
YHH3_k127_10645289_11 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000131 68.0
YHH3_k127_10645289_12 4Fe-4S dicluster domain - - - 0.00000001412 60.0
YHH3_k127_10645289_13 - - - - 0.000001136 53.0
YHH3_k127_10645289_14 Radical SAM domain protein K04034 - 1.21.98.3 0.000006674 50.0
YHH3_k127_10645289_15 Ferredoxin-dependent bilin reductase K08101 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009507,GO:0009536,GO:0009987,GO:0010019,GO:0016491,GO:0016627,GO:0016636,GO:0023052,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0050619,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007 1.3.7.4 0.0008695 50.0
YHH3_k127_10645289_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01534 - 3.6.3.3,3.6.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 513.0
YHH3_k127_10645289_3 Amidase K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 390.0
YHH3_k127_10645289_4 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000007364 180.0
YHH3_k127_10645289_5 dTDP-4-dehydrorhamnose reductase K00067 - 1.1.1.133 0.00000000000000000000000000000000007355 145.0
YHH3_k127_10645289_6 TIGRFAM chlorophyllide reductase subunit Z K11335 - 1.3.7.14,1.3.7.15 0.000000000000000000000000000003056 138.0
YHH3_k127_10645289_7 PFAM oxidoreductase nitrogenase component 1 K02586 - 1.18.6.1 0.0000000000000000000004453 109.0
YHH3_k127_10645289_8 Cytochrome C biogenesis protein transmembrane region - - - 0.0000000000000000002036 99.0
YHH3_k127_10645289_9 Uncharacterised ArCR, COG2043 - - - 0.00000000000004163 81.0
YHH3_k127_10676567_0 NADH ubiquinone oxidoreductase, NADH-binding K00124,K00335,K18331 - 1.12.1.3,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005192 510.0
YHH3_k127_10676567_1 PFAM Histone deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007358 420.0
YHH3_k127_10676567_10 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.00000000000000000000000000000000000000000524 163.0
YHH3_k127_10676567_11 Acyl-transferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000005904 147.0
YHH3_k127_10676567_12 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000001399 143.0
YHH3_k127_10676567_13 COG1595 DNA-directed RNA polymerase specialized sigma K03088 - - 0.000000000000000000000000000000000217 139.0
YHH3_k127_10676567_14 4Fe-4S dicluster domain K00171 - 1.2.7.1 0.000000000000000000000000001257 115.0
YHH3_k127_10676567_15 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000006306 119.0
YHH3_k127_10676567_16 PFAM Uncharacterised protein family (UPF0153) - - - 0.000000000000000000000001276 107.0
YHH3_k127_10676567_17 Radical SAM - - - 0.00000000000000000004359 101.0
YHH3_k127_10676567_18 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117 - - 0.000000000000054 76.0
YHH3_k127_10676567_19 4Fe-4S binding domain - - - 0.000009048 57.0
YHH3_k127_10676567_2 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005478 331.0
YHH3_k127_10676567_20 Heavy-metal resistance - - - 0.00002129 53.0
YHH3_k127_10676567_21 HEAT repeats - - - 0.0003445 50.0
YHH3_k127_10676567_3 short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 321.0
YHH3_k127_10676567_4 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000447 319.0
YHH3_k127_10676567_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 312.0
YHH3_k127_10676567_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002463 260.0
YHH3_k127_10676567_7 aldo keto reductase K07079 - - 0.000000000000000000000000000000000000000000000000000000000000000000939 242.0
YHH3_k127_10676567_8 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000000000000000000000000000000000000000000000000000006535 211.0
YHH3_k127_10676567_9 TIGRFAM Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000001352 183.0
YHH3_k127_10708785_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 568.0
YHH3_k127_10708785_1 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 560.0
YHH3_k127_10708785_10 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008601 282.0
YHH3_k127_10708785_11 permease YjgP YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001813 277.0
YHH3_k127_10708785_12 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000001182 244.0
YHH3_k127_10708785_13 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000007548 220.0
YHH3_k127_10708785_14 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000001442 209.0
YHH3_k127_10708785_15 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000008208 201.0
YHH3_k127_10708785_16 PFAM Class I peptide chain release factor - - - 0.0000000000000000000000000000000000000000003099 162.0
YHH3_k127_10708785_17 methyltransferase - - - 0.000000000000000000000000000000000000000002135 162.0
YHH3_k127_10708785_18 oxidation-reduction process - - - 0.0000000000000000000000000000000000003739 149.0
YHH3_k127_10708785_19 cellular response to dsDNA K11211 - 2.7.1.166 0.00000000000000000000000000003206 128.0
YHH3_k127_10708785_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 523.0
YHH3_k127_10708785_20 Phosphoglycolate phosphatase K01091 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0031404,GO:0033554,GO:0034641,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.1.3.18 0.000000000000000002144 94.0
YHH3_k127_10708785_21 Belongs to the UPF0434 family K09791 - - 0.0000000000000000205 84.0
YHH3_k127_10708785_22 Lipopolysaccharide kinase (Kdo/WaaP) family - - - 0.000000000000001818 90.0
YHH3_k127_10708785_23 Ferritin Dps family protein K03594 - 1.16.3.1 0.00000000461 63.0
YHH3_k127_10708785_24 Lipopolysaccharide kinase (Kdo/WaaP) family - - - 0.00000001082 68.0
YHH3_k127_10708785_25 transferase activity, transferring glycosyl groups K00754 - - 0.000003938 55.0
YHH3_k127_10708785_3 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 476.0
YHH3_k127_10708785_4 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 422.0
YHH3_k127_10708785_5 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 419.0
YHH3_k127_10708785_6 Polysaccharide biosynthesis protein K01784,K08679 - 5.1.3.2,5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 382.0
YHH3_k127_10708785_7 Glycosyltransferase family 9 (heptosyltransferase) K02841 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 299.0
YHH3_k127_10708785_8 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 287.0
YHH3_k127_10708785_9 COG0859 ADP-heptose LPS heptosyltransferase K02841,K02849 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001236 290.0
YHH3_k127_10739633_0 Domain of unknown function (DUF4445) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 458.0
YHH3_k127_10739633_1 FAD linked oxidase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004983 294.0
YHH3_k127_10739633_2 FAD binding domain - - - 0.00000000000000000000000000000000000000000001129 179.0
YHH3_k127_10739633_3 FAD binding domain K00104 - 1.1.3.15 0.00000000000000000000000000000000000000001557 173.0
YHH3_k127_10739633_4 PFAM Tetrahydromethanopterin S-methyltransferase MtrH subunit K00584 - 2.1.1.86 0.000000000000000000000000000000000000000309 151.0
YHH3_k127_10739633_5 4Fe-4S dicluster domain K08264 - 1.8.98.1 0.00000000000000000000000000006864 130.0
YHH3_k127_10739633_6 Amidohydrolase K07045 - - 0.0000000000000000004078 99.0
YHH3_k127_10739633_7 FAD binding domain K00104,K05797 - 1.1.3.15,1.17.99.1 0.00000000000000001761 96.0
YHH3_k127_10739633_8 PFAM FAD linked oxidase domain protein K00102,K03777 - 1.1.2.4,1.1.5.12 0.00000000000000004972 94.0
YHH3_k127_10739633_9 Coproporphyrinogen III oxidase K00228 - 1.3.3.3 0.0000000002614 70.0
YHH3_k127_10743668_0 GTP-binding protein TypA K06207 - - 3.527e-230 727.0
YHH3_k127_10743668_1 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00000000000000000000003008 113.0
YHH3_k127_10743668_2 CoA carboxylase activity K01615,K01965,K02160 - 4.1.1.70,6.4.1.3 0.00000000000000000004218 91.0
YHH3_k127_10743668_3 Na+-transporting oxaloacetate decarboxylase beta subunit K01572 - 4.1.1.3 0.0000000000000000001326 89.0
YHH3_k127_10743668_4 Thrombospondin type 3 repeat - - - 0.000000000006912 78.0
YHH3_k127_10743668_5 Belongs to the sulfur carrier protein TusA family - - - 0.0000000002867 70.0
YHH3_k127_10743668_6 Calcium ion binding. It is involved in the biological process described with cell adhesion K04659 GO:0000902,GO:0001501,GO:0001503,GO:0001932,GO:0001934,GO:0001936,GO:0001938,GO:0001968,GO:0002020,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0003416,GO:0003417,GO:0003674,GO:0005102,GO:0005178,GO:0005198,GO:0005201,GO:0005488,GO:0005496,GO:0005499,GO:0005509,GO:0005515,GO:0005518,GO:0005539,GO:0005575,GO:0005576,GO:0005604,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005912,GO:0005924,GO:0005927,GO:0006928,GO:0006950,GO:0007155,GO:0007160,GO:0007275,GO:0007399,GO:0007517,GO:0007610,GO:0008150,GO:0008201,GO:0008284,GO:0008289,GO:0009653,GO:0009790,GO:0009887,GO:0009888,GO:0009893,GO:0009987,GO:0010562,GO:0010604,GO:0010941,GO:0012505,GO:0014812,GO:0016043,GO:0016203,GO:0016477,GO:0016525,GO:0016528,GO:0016529,GO:0019220,GO:0019222,GO:0019842,GO:0019899,GO:0021700,GO:0022008,GO:0022603,GO:0022607,GO:0022610,GO:0030030,GO:0030054,GO:0030055,GO:0030154,GO:0030182,GO:0030198,GO:0030334,GO:0030335,GO:0030855,GO:0031012,GO:0031175,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031589,GO:0031594,GO:0032101,GO:0032103,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032879,GO:0032989,GO:0032990,GO:0032991,GO:0033554,GO:0033555,GO:0033627,GO:0034103,GO:0034976,GO:0035265,GO:0035989,GO:0036094,GO:0040007,GO:0040011,GO:0040012,GO:0040017,GO:0042127,GO:0042325,GO:0042327,GO:0042981,GO:0043062,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043236,GO:0043237,GO:0043394,GO:0043395,GO:0043931,GO:0043933,GO:0044085,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045202,GO:0045765,GO:0045937,GO:0046872,GO:0048265,GO:0048266,GO:0048468,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048589,GO:0048646,GO:0048666,GO:0048699,GO:0048705,GO:0048731,GO:0048736,GO:0048799,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050678,GO:0050679,GO:0050730,GO:0050731,GO:0050789,GO:0050793,GO:0050794,GO:0050839,GO:0050840,GO:0050896,GO:0050920,GO:0050921,GO:0051093,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051216,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051270,GO:0051272,GO:0051451,GO:0051674,GO:0051716,GO:0060173,GO:0060231,GO:0060255,GO:0060343,GO:0060346,GO:0060348,GO:0060349,GO:0060350,GO:0060351,GO:0060429,GO:0060538,GO:0060548,GO:0061053,GO:0061061,GO:0061383,GO:0061430,GO:0061448,GO:0062023,GO:0065003,GO:0065007,GO:0070161,GO:0070977,GO:0071603,GO:0071622,GO:0071624,GO:0071695,GO:0071840,GO:0080090,GO:0090022,GO:0090023,GO:0090136,GO:0097159,GO:0097367,GO:0098609,GO:0098868,GO:0120036,GO:0120039,GO:1901342,GO:1901343,GO:1901681,GO:1902622,GO:1902624,GO:2000026,GO:2000145,GO:2000147,GO:2000181 - 0.00000001306 65.0
YHH3_k127_10743668_7 membrane - - - 0.000002652 59.0
YHH3_k127_10743668_8 xylanase chitin deacetylase K22278 - 3.5.1.104 0.00000269 55.0
YHH3_k127_10743668_9 regulation of single-species biofilm formation - - - 0.0003182 51.0
YHH3_k127_10762368_0 PFAM lipopolysaccharide biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001532 289.0
YHH3_k127_10762368_1 AAA domain K02450 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009525 256.0
YHH3_k127_10762368_2 PFAM Polysaccharide export protein - - - 0.000000000000000000000000000000000000000000004476 173.0
YHH3_k127_10762368_3 PFAM Polysaccharide export protein - - - 0.0000000000000000000000000000000000000000008473 165.0
YHH3_k127_10799037_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 563.0
YHH3_k127_10799037_1 Thiamine-phosphate synthase K00941,K14153,K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009042 411.0
YHH3_k127_10799037_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004205 325.0
YHH3_k127_10799037_3 NUDIX domain - - - 0.0000000000000000000141 94.0
YHH3_k127_10799283_0 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 464.0
YHH3_k127_10799283_1 DeoC/LacD family aldolase K08321 - 2.3.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 331.0
YHH3_k127_10799283_2 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000002026 243.0
YHH3_k127_10799283_3 PFAM dihydropteroate synthase DHPS K15023 - 2.1.1.258 0.00000000000000000000000000000000000000000000000000000000000000002777 232.0
YHH3_k127_10799283_4 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000001075 169.0
YHH3_k127_10799283_5 Regulatory protein, FmdB family - - - 0.0000000000000000000000000000009574 124.0
YHH3_k127_10799283_6 - - - - 0.00000000000000000000000000019 120.0
YHH3_k127_10799283_7 Protein of unknown function (DUF3467) - - - 0.00000000000000000004572 92.0
YHH3_k127_10799283_8 pyridoxamine 5-phosphate - - - 0.000000001693 66.0
YHH3_k127_10799283_9 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 - 2.3.1.61 0.00004165 46.0
YHH3_k127_10897156_0 Pyridine nucleotide-disulphide oxidoreductase K00335 - 1.6.5.3 0.0 1030.0
YHH3_k127_10897156_1 4Fe-4S dicluster domain - - - 2.429e-226 719.0
YHH3_k127_10897156_2 PFAM molybdopterin oxidoreductase K00123,K05299 - 1.17.1.10,1.17.1.9 6.657e-216 682.0
YHH3_k127_10897156_3 electron transfer flavoprotein, alpha subunit K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 546.0
YHH3_k127_10897156_4 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 406.0
YHH3_k127_10897156_5 PFAM Electron transfer flavoprotein alpha beta-subunit K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006713 353.0
YHH3_k127_10897156_6 DNA polymerase Ligase (LigD) - - - 0.00000000000000000000000000000000000000000000000001691 183.0
YHH3_k127_10897156_7 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334,K18330 - 1.12.1.3,1.6.5.3 0.0000000000000000000000000000000000000000000000001255 183.0
YHH3_k127_10906565_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K10535 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015975,GO:0015980,GO:0016491,GO:0016661,GO:0016663,GO:0019329,GO:0019331,GO:0034641,GO:0042597,GO:0044237,GO:0044281,GO:0044464,GO:0045333,GO:0047991,GO:0055114 1.7.2.6 1.387e-197 623.0
YHH3_k127_10906565_1 cysteine synthase K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 446.0
YHH3_k127_10906565_10 - - - - 0.00001815 49.0
YHH3_k127_10906565_11 - - - - 0.00002735 50.0
YHH3_k127_10906565_2 Homocysteine biosynthesis enzyme, sulfur-incorporation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008677 277.0
YHH3_k127_10906565_3 Conserved protein K01163 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000935 286.0
YHH3_k127_10906565_4 PFAM Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000001038 224.0
YHH3_k127_10906565_6 Protein of unknown function (DUF1566) - - - 0.000000000000000000000000000000000000000000000000002924 199.0
YHH3_k127_10906565_7 Transcriptional regulator K13643 - - 0.00000000000000000000000000000000000000000004372 165.0
YHH3_k127_10906565_8 Cupin domain protein - - - 0.000000000000000000000000000000000000003097 149.0
YHH3_k127_10906565_9 Proto-chlorophyllide reductase 57 kD subunit - - - 0.0000000000000000000000000002046 118.0
YHH3_k127_10907569_0 Fe-S oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 624.0
YHH3_k127_10907569_1 PFAM Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 380.0
YHH3_k127_10907569_10 RNA recognition motif - - - 0.0000000000000000000000000003196 117.0
YHH3_k127_10907569_11 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.000000000000000000000000001083 114.0
YHH3_k127_10907569_12 heat shock protein binding - GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0006790,GO:0008150,GO:0008152,GO:0009058,GO:0009403,GO:0009404,GO:0009987,GO:0016002,GO:0016043,GO:0016491,GO:0016667,GO:0017144,GO:0019748,GO:0020037,GO:0022607,GO:0042802,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044272,GO:0044550,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0051259,GO:0051260,GO:0055114,GO:0065003,GO:0070206,GO:0070207,GO:0070813,GO:0070814,GO:0071840,GO:0097159,GO:1901363,GO:1903136 - 0.000000000000000000000000005301 122.0
YHH3_k127_10907569_13 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 0.0000000000000000000000001399 121.0
YHH3_k127_10907569_14 Menaquinol oxidoreductase complex Cbc4, cytochrome c subunit - - - 0.0000000000000000000001404 104.0
YHH3_k127_10907569_15 mRNA binding - - - 0.000000000000000136 81.0
YHH3_k127_10907569_16 nucleotidyltransferase activity K07076 - - 0.000000000000003178 79.0
YHH3_k127_10907569_2 electron transfer flavoprotein, alpha subunit K03522,K22432 - 1.3.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 336.0
YHH3_k127_10907569_3 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008854 333.0
YHH3_k127_10907569_4 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 317.0
YHH3_k127_10907569_5 Electron transfer flavoprotein domain K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 313.0
YHH3_k127_10907569_6 4Fe-4S dicluster domain K00184 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 301.0
YHH3_k127_10907569_7 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001301 287.0
YHH3_k127_10907569_8 PFAM regulatory protein TetR K13770 - - 0.00000000000000000000000000000000000000000000000000000000000000000001151 238.0
YHH3_k127_10907569_9 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000003864 229.0
YHH3_k127_10975186_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 3.008e-265 826.0
YHH3_k127_10975186_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 478.0
YHH3_k127_11040469_0 metal-dependent phosphohydrolase HD region K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 414.0
YHH3_k127_11040469_1 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 321.0
YHH3_k127_11040469_2 PFAM Aminotransferase class I and II K11358 - 2.6.1.1 0.0000000000000000000000000000001348 125.0
YHH3_k127_11050537_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006432 538.0
YHH3_k127_11050537_1 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000067 387.0
YHH3_k127_11050537_2 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 345.0
YHH3_k127_11050537_3 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 289.0
YHH3_k127_11050537_4 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000005019 247.0
YHH3_k127_11050537_5 Acylphosphatase K01512 - 3.6.1.7 0.0000000000000000000000000001099 118.0
YHH3_k127_11050537_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000007786 105.0
YHH3_k127_11050537_7 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.0000000000000001869 81.0
YHH3_k127_11050537_8 - - - - 0.0000000000005686 83.0
YHH3_k127_11150014_0 Bacterial regulatory protein, Fis family K02481,K07713,K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000296 456.0
YHH3_k127_11150014_1 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 319.0
YHH3_k127_11150014_2 response regulator receiver - - - 0.000000000000000000000000000000000000000000000000008989 198.0
YHH3_k127_11150014_3 response regulator K07712 - - 0.0000000000000000000000000000000000000000000008689 187.0
YHH3_k127_1117460_0 Peptidase M16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 527.0
YHH3_k127_1117460_1 MMPL family K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 460.0
YHH3_k127_1117460_10 Photosynthesis system II assembly factor YCF48 - - - 0.0000000000000000000000000000000000000000001506 173.0
YHH3_k127_1117460_11 FAD binding domain - - - 0.0000000000000000000000000000000002158 148.0
YHH3_k127_1117460_12 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III - - - 0.000000000000000000000000000001159 136.0
YHH3_k127_1117460_13 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000000000000000000005041 111.0
YHH3_k127_1117460_14 Bacterial regulatory proteins, tetR family - - - 0.00000000000000006349 90.0
YHH3_k127_1117460_15 - - - - 0.00000000000001162 87.0
YHH3_k127_1117460_16 Protein of unknown function (DUF1329) - - - 0.00000000002569 76.0
YHH3_k127_1117460_17 Flavodoxin domain K00230 - 1.3.5.3 0.0000000002589 72.0
YHH3_k127_1117460_18 Belongs to the HY2 family K05369 - 1.3.7.2 0.0002493 52.0
YHH3_k127_1117460_2 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 427.0
YHH3_k127_1117460_3 PFAM Peptidase M16 inactive domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003888 420.0
YHH3_k127_1117460_4 PFAM Band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000441 344.0
YHH3_k127_1117460_5 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 347.0
YHH3_k127_1117460_6 PFAM CobQ CobB MinD ParA nucleotide binding domain K07321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004331 280.0
YHH3_k127_1117460_7 PFAM Tetrahydromethanopterin S-methyltransferase MtrH subunit K00584 - 2.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000003773 255.0
YHH3_k127_1117460_8 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001276 256.0
YHH3_k127_1117460_9 Methionine synthase B12-binding module cap domain protein K00548,K14084 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000001331 211.0
YHH3_k127_11185173_0 NADH ubiquinone oxidoreductase, NADH-binding K00124,K00335,K18331 - 1.12.1.3,1.6.5.3 5.972e-258 808.0
YHH3_k127_11185173_1 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000000000000000000000000000000000000000000000000000000001333 218.0
YHH3_k127_11192090_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004222 612.0
YHH3_k127_11192090_1 TIGRFAM cysteine K12339 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005727 401.0
YHH3_k127_11192090_10 IMG reference gene - - - 0.0000000000000001152 85.0
YHH3_k127_11192090_11 4Fe-4S binding domain K02574 - - 0.000000002224 70.0
YHH3_k127_11192090_12 4Fe-4S binding domain - - - 0.0000004434 63.0
YHH3_k127_11192090_13 Transcriptional regulator, MarR family - - - 0.000002665 55.0
YHH3_k127_11192090_14 Protein of unknown function (DUF1573) - - - 0.0001275 48.0
YHH3_k127_11192090_15 transcriptional regulator - - - 0.0004016 49.0
YHH3_k127_11192090_2 Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur K03146 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000696 389.0
YHH3_k127_11192090_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 353.0
YHH3_k127_11192090_4 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000001068 178.0
YHH3_k127_11192090_5 transcriptional regulator K13643 - - 0.0000000000000000000000000000000000000000005335 161.0
YHH3_k127_11192090_6 - - - - 0.000000000000000000000000000000000000002715 156.0
YHH3_k127_11192090_7 Psort location CytoplasmicMembrane, score 10.00 - - - 0.0000000000000000000000002532 115.0
YHH3_k127_11192090_8 Flavodoxin - - - 0.000000000000000004171 94.0
YHH3_k127_11192090_9 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.000000000000000006223 89.0
YHH3_k127_11276968_0 PFAM Aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009635 591.0
YHH3_k127_11276968_1 amino acid-binding ACT domain protein K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 485.0
YHH3_k127_11276968_2 Proposed homoserine kinase K15635 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000804 475.0
YHH3_k127_11276968_3 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 298.0
YHH3_k127_11276968_4 histidine kinase, HAMP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005641 261.0
YHH3_k127_11276968_5 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000009384 148.0
YHH3_k127_11292899_0 PFAM magnesium chelatase ChlI subunit K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 498.0
YHH3_k127_11292899_1 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009777 456.0
YHH3_k127_11292899_2 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 GO:0002682,GO:0002683,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016043,GO:0016829,GO:0016849,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0022607,GO:0031347,GO:0031348,GO:0034214,GO:0035821,GO:0040007,GO:0042802,GO:0043170,GO:0043207,GO:0043545,GO:0043933,GO:0044003,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044403,GO:0044413,GO:0044414,GO:0044419,GO:0045088,GO:0045824,GO:0046483,GO:0048519,GO:0048583,GO:0048585,GO:0050776,GO:0050777,GO:0050789,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051259,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0051832,GO:0051833,GO:0052031,GO:0052037,GO:0052167,GO:0052170,GO:0052173,GO:0052200,GO:0052255,GO:0052261,GO:0052306,GO:0052309,GO:0052552,GO:0052553,GO:0052561,GO:0052562,GO:0052564,GO:0052572,GO:0061799,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0075136,GO:0080134,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.17 0.00000000000000000000000000000000000000000000000000001792 192.0
YHH3_k127_11292899_3 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000000000000000000000000000000000000001002 164.0
YHH3_k127_11345372_0 PFAM RNA-directed DNA polymerase (Reverse transcriptase) K00986 - 2.7.7.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005526 559.0
YHH3_k127_11345372_1 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 432.0
YHH3_k127_11345372_10 Hexapeptide repeat of succinyl-transferase - - - 0.000000000000000000000000000000000000001556 154.0
YHH3_k127_11345372_11 metal-dependent hydrolase of the TIM-barrel fold K07045 - - 0.0000000000000000000000000000000000002011 151.0
YHH3_k127_11345372_12 GDSL-like Lipase/Acylhydrolase - - - 0.0000002406 59.0
YHH3_k127_11345372_2 Chorismate mutase type II K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 390.0
YHH3_k127_11345372_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006716 389.0
YHH3_k127_11345372_4 ABC-type uncharacterized transport system K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 361.0
YHH3_k127_11345372_5 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09697 - 3.6.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005336 344.0
YHH3_k127_11345372_6 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003906 282.0
YHH3_k127_11345372_7 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000006783 232.0
YHH3_k127_11345372_8 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000003403 230.0
YHH3_k127_11345372_9 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000001959 208.0
YHH3_k127_11352871_0 Dehydrogenase K00162,K21417 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005539 383.0
YHH3_k127_11352871_1 E1 component K21416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 329.0
YHH3_k127_11392634_0 Belongs to the citrate synthase family K01647 GO:0003674,GO:0003824,GO:0004108,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016740,GO:0016746,GO:0016999,GO:0017144,GO:0019752,GO:0036440,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046912,GO:0055114,GO:0071704,GO:0072350 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 614.0
YHH3_k127_11392634_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003926 450.0
YHH3_k127_11392634_10 FAD binding domain - - - 0.00000000000000000000000000000000000000002173 168.0
YHH3_k127_11392634_11 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.0000000000000000000000000000000000000001723 161.0
YHH3_k127_11392634_12 helicase superfamily c-terminal domain K06877 - - 0.0000000000000000000000000000004559 124.0
YHH3_k127_11392634_13 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000001791 124.0
YHH3_k127_11392634_14 Smr domain - - - 0.0000000000000000000000000003426 118.0
YHH3_k127_11392634_15 Peptidase M14, carboxypeptidase A K05996 - 3.4.17.18 0.000000000000000000002658 110.0
YHH3_k127_11392634_16 Aminopeptidase I zinc metalloprotease (M18) K01267 - 3.4.11.21 0.00000000000000000002759 95.0
YHH3_k127_11392634_17 LysM domain - - - 0.00000000000000004584 94.0
YHH3_k127_11392634_18 peptidyl-tyrosine sulfation - - - 0.000000000000002082 85.0
YHH3_k127_11392634_19 Domain present in PSD-95, Dlg, and ZO-1/2. K02452 - - 0.000000000000004137 86.0
YHH3_k127_11392634_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 372.0
YHH3_k127_11392634_20 TIGRFAM competence protein ComEA helix-hairpin-helix repeat K02237 - - 0.00000000000008114 81.0
YHH3_k127_11392634_3 regulation of RNA biosynthetic process - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004389 334.0
YHH3_k127_11392634_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001025 284.0
YHH3_k127_11392634_5 aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001011 263.0
YHH3_k127_11392634_6 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000003364 220.0
YHH3_k127_11392634_7 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.000000000000000000000000000000000000000000000000000000000005871 212.0
YHH3_k127_11392634_8 RNase_H superfamily K07502 - - 0.0000000000000000000000000000000000000000000000000001836 201.0
YHH3_k127_11392634_9 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000000001616 175.0
YHH3_k127_11442546_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 2.443e-199 634.0
YHH3_k127_11442546_1 DNA photolyase K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 607.0
YHH3_k127_11442546_10 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000005139 160.0
YHH3_k127_11442546_11 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000001776 137.0
YHH3_k127_11442546_12 lycopene cyclase - - - 0.00000000000000000000299 96.0
YHH3_k127_11442546_13 lycopene cyclase - - - 0.0000000000000000003791 90.0
YHH3_k127_11442546_14 TRL-like protein family - - - 0.00009942 49.0
YHH3_k127_11442546_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 GO:0003674,GO:0003824,GO:0008113,GO:0008150,GO:0008152,GO:0009405,GO:0016491,GO:0016667,GO:0016671,GO:0044419,GO:0051704,GO:0055114 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 478.0
YHH3_k127_11442546_3 Protein of unknown function (DUF1722) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 424.0
YHH3_k127_11442546_4 cysteine-tRNA ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 424.0
YHH3_k127_11442546_5 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 340.0
YHH3_k127_11442546_6 Phytoene dehydrogenase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005934 334.0
YHH3_k127_11442546_7 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006769 273.0
YHH3_k127_11442546_8 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003889 272.0
YHH3_k127_11442546_9 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001358 251.0
YHH3_k127_11445699_0 7TM-HD extracellular K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 582.0
YHH3_k127_11445699_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001458 261.0
YHH3_k127_11445699_2 Diguanylate cyclase K21084 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000001683 248.0
YHH3_k127_11445699_3 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000003533 162.0
YHH3_k127_11445699_4 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000006731 102.0
YHH3_k127_11445699_5 Histidine kinase K07636 - 2.7.13.3 0.00000000003083 78.0
YHH3_k127_11445699_6 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00003924 57.0
YHH3_k127_11526601_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003029 524.0
YHH3_k127_11526601_1 chorismate binding enzyme K01657,K01665,K03342,K13950 - 2.6.1.85,4.1.3.27,4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008884 491.0
YHH3_k127_11526601_2 PFAM NAD-dependent epimerase dehydratase K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008675 357.0
YHH3_k127_11526601_3 Male sterility protein K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000000000000006956 264.0
YHH3_k127_11526601_4 Amino-transferase class IV - - - 0.0000000000000000000000000000000000000000000000000000000000000000003593 239.0
YHH3_k127_11526601_5 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000001493 207.0
YHH3_k127_11639938_0 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.00000000000000000000000000000000000000000000000000002298 196.0
YHH3_k127_11639938_1 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.000000000000000000000000000004425 121.0
YHH3_k127_11697455_0 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012,K16180 - 2.8.1.6,5.4.99.58 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 344.0
YHH3_k127_11697455_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003312 323.0
YHH3_k127_11697455_2 Homocysteine biosynthesis enzyme, sulfur-incorporation - - - 0.00000000000000000000000000000000000000000000000000000000000544 211.0
YHH3_k127_11697455_3 MOSC domain containing protein - - - 0.000000000000000000000000000000000000000000000000000001722 194.0
YHH3_k127_11697455_4 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000004179 156.0
YHH3_k127_11697455_5 Belongs to the Fur family K09825,K22297 - - 0.000000000000000000000000000000007491 133.0
YHH3_k127_11697455_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000004275 121.0
YHH3_k127_11697455_7 Transcriptional regulator, Crp Fnr family( K21562 - - 0.0000000000000000000000000003631 123.0
YHH3_k127_11697455_8 TIGRFAM anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.000000005066 61.0
YHH3_k127_11697455_9 TIGRFAM carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.0000179 53.0
YHH3_k127_11699612_0 Memo-like protein K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 323.0
YHH3_k127_11699612_1 Esterase PHB depolymerase K03932 - - 0.000000000000000000000000000000000000000000001221 181.0
YHH3_k127_11699612_2 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000006248 156.0
YHH3_k127_11699612_3 FAD binding domain K00313 - - 0.0001992 53.0
YHH3_k127_1171000_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 4.265e-228 721.0
YHH3_k127_1171000_1 tRNA 3'-trailer cleavage K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 327.0
YHH3_k127_1171000_2 4fe-4S ferredoxin, iron-sulfur binding domain protein K19516 - - 0.0000000000000000000000001402 110.0
YHH3_k127_11827880_0 NADH ubiquinone oxidoreductase, NADH-binding K00124,K00335,K18331 - 1.12.1.3,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006667 501.0
YHH3_k127_11827880_1 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009036 377.0
YHH3_k127_11827880_10 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000002326 146.0
YHH3_k127_11827880_11 ferredoxin oxidoreductase beta subunit K00170 - 1.2.7.1 0.00000000000000000000000000000002173 136.0
YHH3_k127_11827880_12 FAD linked oxidase domain protein K00104 - 1.1.3.15 0.00000000000000000000001331 116.0
YHH3_k127_11827880_13 FAD binding domain K00104 - 1.1.3.15 0.0000000000000000000007213 111.0
YHH3_k127_11827880_14 Thioredoxin-like [2Fe-2S] ferredoxin K00127 - - 0.00000000000000000001206 101.0
YHH3_k127_11827880_15 4Fe-4S dicluster domain K00171 - 1.2.7.1 0.0000000000000000006893 89.0
YHH3_k127_11827880_16 cAMP biosynthetic process - - - 0.0000000000004163 80.0
YHH3_k127_11827880_17 Nitrite and sulphite reductase 4Fe-4S - - - 0.000000000001482 68.0
YHH3_k127_11827880_18 PFAM sigma-54 factor interaction domain-containing protein K02584,K12266 - - 0.0000001811 53.0
YHH3_k127_11827880_19 Ferredoxin-dependent bilin reductase K08101 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009507,GO:0009536,GO:0009987,GO:0010019,GO:0016491,GO:0016627,GO:0016636,GO:0023052,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0050619,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007 1.3.7.4 0.0000002811 61.0
YHH3_k127_11827880_2 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004361 363.0
YHH3_k127_11827880_20 Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin K05370 - 1.3.7.3 0.0000003773 60.0
YHH3_k127_11827880_21 4Fe-4S binding domain K00176 - 1.2.7.3 0.000008385 50.0
YHH3_k127_11827880_3 Transposase K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 325.0
YHH3_k127_11827880_4 FAD linked oxidase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000147 272.0
YHH3_k127_11827880_5 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000000000000000000000000000000000001619 218.0
YHH3_k127_11827880_6 FAD binding domain - - - 0.00000000000000000000000000000000000000004898 168.0
YHH3_k127_11827880_7 - - - - 0.0000000000000000000000000000000000001619 156.0
YHH3_k127_11827880_8 Photosynthesis system II assembly factor YCF48 - - - 0.0000000000000000000000000000000000002701 155.0
YHH3_k127_11827880_9 MMPL family K07003 - - 0.00000000000000000000000000000000002709 142.0
YHH3_k127_1189883_0 Beta-Casp domain K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 494.0
YHH3_k127_1189883_1 PFAM aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000001314 196.0
YHH3_k127_1189883_2 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000001782 145.0
YHH3_k127_1189883_4 Transketolase K00615 GO:0000287,GO:0003674,GO:0003824,GO:0004802,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005777,GO:0005783,GO:0005789,GO:0005829,GO:0005975,GO:0005996,GO:0005997,GO:0005999,GO:0006081,GO:0006098,GO:0006139,GO:0006355,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009058,GO:0009117,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0012505,GO:0016020,GO:0016051,GO:0016604,GO:0016607,GO:0016740,GO:0016744,GO:0019219,GO:0019222,GO:0019321,GO:0019322,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0019842,GO:0030246,GO:0030976,GO:0031323,GO:0031326,GO:0031935,GO:0031974,GO:0031981,GO:0031984,GO:0033043,GO:0033044,GO:0034641,GO:0036094,GO:0040008,GO:0042175,GO:0042579,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046166,GO:0046184,GO:0046364,GO:0046390,GO:0046483,GO:0046496,GO:0046872,GO:0046983,GO:0048029,GO:0048037,GO:0050662,GO:0050789,GO:0050794,GO:0051128,GO:0051156,GO:0051171,GO:0051186,GO:0051252,GO:0055086,GO:0060255,GO:0060968,GO:0065007,GO:0070013,GO:0071704,GO:0072524,GO:0080090,GO:0090407,GO:0097159,GO:0098827,GO:1901135,GO:1901137,GO:1901360,GO:1901363,GO:1901564,GO:1901576,GO:1901681,GO:1902275,GO:1903506,GO:2000112,GO:2001141 2.2.1.1 0.000000343 53.0
YHH3_k127_12079741_0 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000002046 246.0
YHH3_k127_12079741_1 Peptidase family M50 - - - 0.000000000000000144 81.0
YHH3_k127_12084002_0 Carbamoyltransferase C-terminus K00612 - - 4.619e-209 655.0
YHH3_k127_12084002_1 - - - - 0.0000000000000001113 85.0
YHH3_k127_12084002_2 - - - - 0.0000000000005533 69.0
YHH3_k127_12087926_0 PFAM Cysteine-rich domain K08264 - 1.8.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 516.0
YHH3_k127_12087926_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 522.0
YHH3_k127_12087926_2 NMT1-like family K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 289.0
YHH3_k127_12087926_3 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001107 264.0
YHH3_k127_12087926_4 Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrE may be responsible for anchoring the complex to the membrane K08265 GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009058,GO:0009061,GO:0009987,GO:0015947,GO:0015948,GO:0015975,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016667,GO:0031224,GO:0043446,GO:0043447,GO:0044237,GO:0044249,GO:0044425,GO:0045333,GO:0051912,GO:0055114,GO:0071704,GO:1901576 1.8.98.1 0.0000000000004659 78.0
YHH3_k127_12087926_5 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K01883,K02533,K08281,K15396 - 2.1.1.200,3.5.1.19,6.1.1.16 0.000000003202 60.0
YHH3_k127_12146917_0 Domain of unknown function (DUF3552) K18682 - - 5.771e-200 638.0
YHH3_k127_12146917_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005876 547.0
YHH3_k127_12146917_2 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000001394 62.0
YHH3_k127_12223827_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 5.36e-196 617.0
YHH3_k127_12223827_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 586.0
YHH3_k127_12223827_2 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000003893 223.0
YHH3_k127_12226842_0 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000001613 222.0
YHH3_k127_12226842_1 - - - - 0.00001029 56.0
YHH3_k127_12233170_0 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000811 516.0
YHH3_k127_12233170_1 4Fe-4S single cluster domain K01843 - 5.4.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008653 488.0
YHH3_k127_12233170_10 Bacterial DNA-binding protein K03530 - - 0.00000000000000000000000003116 110.0
YHH3_k127_12233170_12 excinuclease ABC activity K02342 - 2.7.7.7 0.0000000003495 62.0
YHH3_k127_12233170_13 Nucleotidyltransferase domain - - - 0.0006963 48.0
YHH3_k127_12233170_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007428 391.0
YHH3_k127_12233170_3 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 351.0
YHH3_k127_12233170_4 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.000000000000000000000000000000000000000000000000000000000005066 220.0
YHH3_k127_12233170_5 - - - - 0.00000000000000000000000000000000000000000000000003368 184.0
YHH3_k127_12233170_6 Chlorophyllase K08099 - 3.1.1.14 0.000000000000000000000000000000000000000006185 166.0
YHH3_k127_12233170_7 SMART HEPN domain protein - - - 0.00000000000000000000000000000000000000001156 156.0
YHH3_k127_12233170_8 Plasmid stabilization system - - - 0.0000000000000000000000000000000000009593 140.0
YHH3_k127_12233170_9 acetyltransferase K18815 - 2.3.1.82 0.00000000000000000000000000000000191 135.0
YHH3_k127_12255172_0 Protein of unknown function (DUF819) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 464.0
YHH3_k127_12255172_1 mandelate racemase muconate lactonizing K19802 - 5.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 437.0
YHH3_k127_12255172_2 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004731,GO:0006082,GO:0006139,GO:0006144,GO:0006168,GO:0006520,GO:0006555,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009112,GO:0009113,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0017061,GO:0017144,GO:0018130,GO:0019438,GO:0019509,GO:0019752,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0055086,GO:0071265,GO:0071267,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005146 382.0
YHH3_k127_12255172_3 Papain family cysteine protease - - - 0.00000000000000000000000000000000000000000006505 177.0
YHH3_k127_12255172_4 peroxiredoxin activity - - - 0.0000000000000000000000000000005528 140.0
YHH3_k127_12260125_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 3.463e-245 771.0
YHH3_k127_12260125_1 DNA topoisomerase II activity K03167 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003559 599.0
YHH3_k127_12260125_2 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03166 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007194 437.0
YHH3_k127_12260125_3 methyltransferase - - - 0.000000000000000000000000000000000000000000000000001781 191.0
YHH3_k127_12260125_4 - - - - 0.000000000000000000000000000000000000000000000000003464 190.0
YHH3_k127_12260125_5 FAD dependent oxidoreductase K09879 - - 0.00000000000000000000299 96.0
YHH3_k127_12276341_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 7.541e-254 816.0
YHH3_k127_12276341_1 Exporters of the RND superfamily K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003157 451.0
YHH3_k127_12276341_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000006472 192.0
YHH3_k127_12276341_3 Protein of unknown function (DUF1329) - - - 0.00000000000000000000007499 112.0
YHH3_k127_12276341_4 Transcriptional regulator - GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00000009356 60.0
YHH3_k127_12276341_5 Protein of unknown function (DUF1302) - - - 0.0001609 54.0
YHH3_k127_12312922_0 Phytoene dehydrogenase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009937 419.0
YHH3_k127_12312922_1 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001339 261.0
YHH3_k127_12312922_2 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000000000000000000129 203.0
YHH3_k127_12312922_3 Alpha beta hydrolase K00433 - 1.11.1.10 0.0000000000000000000000016 113.0
YHH3_k127_12312922_4 - - - - 0.00000000000000000000002122 108.0
YHH3_k127_12312922_5 Pyridoxamine 5'-phosphate oxidase - - - 0.000000001629 67.0
YHH3_k127_12394632_0 PhoH-like protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 406.0
YHH3_k127_12394632_1 Phosphoribosyl-ATP pyrophosphohydrolase K02499,K04765 - 3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000003341 222.0
YHH3_k127_12394632_2 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000006957 170.0
YHH3_k127_12394632_3 7TM-HD extracellular K07037 - - 0.0000000000000000000000001945 116.0
YHH3_k127_12462225_0 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004974 292.0
YHH3_k127_12462225_1 Major facilitator Superfamily K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008472 296.0
YHH3_k127_12462225_2 endonuclease III K07457 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004342 254.0
YHH3_k127_12462225_3 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000002155 140.0
YHH3_k127_12462225_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000008983 78.0
YHH3_k127_12509308_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.0 1451.0
YHH3_k127_12509308_1 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 5.89e-284 894.0
YHH3_k127_12509308_10 Protein of unknown function DUF89 K09116 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002809 265.0
YHH3_k127_12509308_11 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000044 242.0
YHH3_k127_12509308_12 Flavodoxin domain K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000001006 228.0
YHH3_k127_12509308_13 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000001421 249.0
YHH3_k127_12509308_14 Protein of unknown function (DUF1847) - - - 0.00000000000000000000000000000000000000000000000000000000000003237 221.0
YHH3_k127_12509308_15 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00124 - - 0.00000000000000000000000000000000000000000000000000000000002074 214.0
YHH3_k127_12509308_16 molybdopterin cofactor binding K00123,K08348 - 1.17.1.9,1.17.5.3 0.00000000000000000000000000000000000000000000000000002683 193.0
YHH3_k127_12509308_17 PFAM Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000002418 181.0
YHH3_k127_12509308_18 Dinitrogenase iron-molybdenum cofactor - - - 0.000000000000000000000000000000000000006992 153.0
YHH3_k127_12509308_19 FmdE, Molybdenum formylmethanofuran dehydrogenase operon - - - 0.00000000000000000000000000000000000001958 152.0
YHH3_k127_12509308_2 PFAM Metallo-beta-lactamase superfamily - - - 2.599e-210 659.0
YHH3_k127_12509308_20 Necessary for formate dehydrogenase activity K02380 - - 0.0000000000000000000000000000002671 134.0
YHH3_k127_12509308_21 Belongs to the HY2 family K05369 - 1.3.7.2 0.0000000000000000000000000000113 127.0
YHH3_k127_12509308_22 nitrogen fixation - - - 0.00000000000000011 82.0
YHH3_k127_12509308_23 4Fe-4S binding domain - - - 0.0000000000000003796 79.0
YHH3_k127_12509308_24 PFAM Glycoside hydrolase 15-related - - - 0.00000000000001522 76.0
YHH3_k127_12509308_25 - - - - 0.000000000001031 79.0
YHH3_k127_12509308_26 Dinitrogenase iron-molybdenum cofactor - - - 0.00000000001113 70.0
YHH3_k127_12509308_27 Uncharacterised ArCR, COG2043 - - - 0.00000000009959 71.0
YHH3_k127_12509308_28 Family of unknown function (DUF5320) - - - 0.0000000002739 66.0
YHH3_k127_12509308_29 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000006036 55.0
YHH3_k127_12509308_3 Belongs to the glycosyl hydrolase 1 family K05350 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 587.0
YHH3_k127_12509308_4 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 521.0
YHH3_k127_12509308_5 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 509.0
YHH3_k127_12509308_6 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004486 459.0
YHH3_k127_12509308_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000374 380.0
YHH3_k127_12509308_8 PFAM ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 314.0
YHH3_k127_12509308_9 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002071 280.0
YHH3_k127_12516124_0 Protein-disulfide isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 363.0
YHH3_k127_12516124_1 Belongs to the Nudix hydrolase family - - - 0.00000000000000000000006199 104.0
YHH3_k127_12516124_2 4Fe-4S binding domain protein - - - 0.0000004463 52.0
YHH3_k127_12539295_0 Mediates zinc uptake. May also transport other divalent cations K07238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007233 507.0
YHH3_k127_12539295_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 378.0
YHH3_k127_12539295_10 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000003845 154.0
YHH3_k127_12539295_11 Helix-turn-helix domain K07726 - - 0.0000000000000000000000000004069 116.0
YHH3_k127_12539295_12 Phosphopantetheine attachment site - - - 0.0000000000000000000000006636 108.0
YHH3_k127_12539295_13 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000001119 109.0
YHH3_k127_12539295_14 3-hydroxymyristoyl 3-hydroxydecanoyl-(acyl carrier protein) K02372 - 4.2.1.59 0.00000000000000000000001833 105.0
YHH3_k127_12539295_15 Cadherin repeats. - - - 0.000000001835 70.0
YHH3_k127_12539295_16 protein conserved in bacteria - - - 0.000000002023 70.0
YHH3_k127_12539295_17 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0000339 57.0
YHH3_k127_12539295_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458,K14660 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005614 343.0
YHH3_k127_12539295_3 reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000002592 269.0
YHH3_k127_12539295_4 Putative, 10TM heavy-metal exporter K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002375 268.0
YHH3_k127_12539295_5 Efflux ABC transporter permease protein K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002587 273.0
YHH3_k127_12539295_6 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001483 263.0
YHH3_k127_12539295_7 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458,K14660 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000122 231.0
YHH3_k127_12539295_8 Aminotransferase class-III K00819 - 2.6.1.13 0.0000000000000000000000000000000000000000000000000000001048 210.0
YHH3_k127_12539295_9 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000000000000000003405 154.0
YHH3_k127_12548277_0 TIGRFAM penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 8.256e-210 670.0
YHH3_k127_12548277_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009595 571.0
YHH3_k127_12548277_2 Amino-transferase class IV K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004056 427.0
YHH3_k127_12548277_3 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009925 396.0
YHH3_k127_12548277_4 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001 266.0
YHH3_k127_12548277_5 PFAM 5-formyltetrahydrofolate cyclo-ligase K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000006281 167.0
YHH3_k127_12548277_6 Nitrite and sulphite reductase 4Fe-4S domain - - - 0.00000000000000000000002039 111.0
YHH3_k127_12617773_0 Radical SAM superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 493.0
YHH3_k127_12617773_1 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 332.0
YHH3_k127_12617773_2 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 293.0
YHH3_k127_12617773_3 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000002647 166.0
YHH3_k127_12617773_4 Lipid A biosynthesis K02517 - 2.3.1.241 0.0000000000000000000000000000000485 138.0
YHH3_k127_12617773_5 Glycosyl transferase, family 9 K02841,K02843,K02847,K02849,K21003 - - 0.000000000000000000000000000001505 133.0
YHH3_k127_12617773_6 inositol 2-dehydrogenase activity - - - 0.0000001017 63.0
YHH3_k127_12640630_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 9.195e-205 654.0
YHH3_k127_12640630_1 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00180 - 1.2.7.8 0.0000000000000000000000000000000000008248 145.0
YHH3_k127_12669634_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1170.0
YHH3_k127_12669634_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 3.547e-321 1005.0
YHH3_k127_12669634_10 molybdenum cofactor guanylyltransferase activity K03752,K13818 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.77 0.0000000000000000000000000000000000000000000000001446 192.0
YHH3_k127_12669634_11 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008104,GO:0008150,GO:0009966,GO:0010646,GO:0010738,GO:0023051,GO:0033036,GO:0034237,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051018,GO:0051179,GO:0065007,GO:1902531 3.1.4.58 0.0000000000000000000000000000000000004647 148.0
YHH3_k127_12669634_12 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000001415 146.0
YHH3_k127_12669634_13 Cyclophilin-like K09143 - - 0.00000000000000000000000000000000004971 138.0
YHH3_k127_12669634_14 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000004941 125.0
YHH3_k127_12669634_15 Thioredoxin-like - - - 0.000000000000000000000004167 108.0
YHH3_k127_12669634_17 Modulates RecA activity K03565 - - 0.00000000002168 71.0
YHH3_k127_12669634_18 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000003128 55.0
YHH3_k127_12669634_19 Helix-turn-helix XRE-family like proteins - - - 0.0004873 46.0
YHH3_k127_12669634_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009292,GO:0009294,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030420,GO:0031668,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0046483,GO:0050896,GO:0051704,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 486.0
YHH3_k127_12669634_3 Phage integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005614 340.0
YHH3_k127_12669634_4 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 334.0
YHH3_k127_12669634_5 Competence-damaged protein K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 321.0
YHH3_k127_12669634_6 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006725 300.0
YHH3_k127_12669634_7 proteolysis - - - 0.00000000000000000000000000000000000000000000000000000000000000000006333 237.0
YHH3_k127_12669634_8 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000001024 238.0
YHH3_k127_12669634_9 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000006038 226.0
YHH3_k127_128226_0 Threonine synthase N terminus K01733 - 4.2.3.1 1.258e-201 638.0
YHH3_k127_128226_1 AAA domain (dynein-related subfamily) K03404,K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 545.0
YHH3_k127_128226_2 ferrous iron transmembrane transporter activity K04759 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 418.0
YHH3_k127_128226_3 Adenylylsulphate kinase K00860 - 2.7.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004935 283.0
YHH3_k127_128226_4 PFAM iron dependent repressor K03709 - - 0.000000000000000000000000000000000000000000000000003478 190.0
YHH3_k127_128226_5 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000292 156.0
YHH3_k127_128226_6 - - - - 0.000000000000000000000000000003522 123.0
YHH3_k127_12823544_0 PFAM carboxyl transferase K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 1.099e-262 816.0
YHH3_k127_12823544_1 PFAM glycosyl transferase family 9 - - - 0.0000000000000000000000000000000000000000000001207 173.0
YHH3_k127_12823544_2 PFAM Transposase IS116 IS110 IS902 family - - - 0.00000000000000003081 82.0
YHH3_k127_12823544_3 Domain of unknown function (DUF4340) - - - 0.0002837 50.0
YHH3_k127_12834568_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 364.0
YHH3_k127_12834568_1 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 361.0
YHH3_k127_12834568_2 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009031 307.0
YHH3_k127_12834568_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002234 273.0
YHH3_k127_12834568_4 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000006409 161.0
YHH3_k127_12835498_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.531e-205 648.0
YHH3_k127_12835498_1 phosphoglycerate mutase activity K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 327.0
YHH3_k127_12872672_0 Hypothetical glycosyl hydrolase family 13 K11931 - - 0.0000000000000000000000000000000000000001948 156.0
YHH3_k127_12872672_1 Exports the biofilm adhesin polysaccharide poly-beta- 1,6-N-acetyl-D-glucosamine (PGA) across the outer membrane. The PGA transported seems to be partially N-deacetylated since N- deacetylation of PGA by PgaB is needed for PGA export through the PgaA porin K11935 - - 0.0000000000004485 81.0
YHH3_k127_1309983_0 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005067 580.0
YHH3_k127_1309983_1 PFAM response regulator receiver K07657,K07663 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009698 323.0
YHH3_k127_1309983_2 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000004876 187.0
YHH3_k127_1309983_3 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000004806 182.0
YHH3_k127_1309983_4 Protein of unknown function (DUF3450) - - - 0.0000000000000000000000000000000011 141.0
YHH3_k127_1309983_5 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000000000000000000000003538 121.0
YHH3_k127_1309983_6 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000483 119.0
YHH3_k127_1309983_7 energy transducer activity K03832 - - 0.0000000000000002525 88.0
YHH3_k127_1311468_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic K00058 - 1.1.1.399,1.1.1.95 2.005e-202 642.0
YHH3_k127_1311468_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 561.0
YHH3_k127_1311468_10 Pyruvate ferredoxin/flavodoxin oxidoreductase - - - 0.0000000000000000000000000000000000000000000152 173.0
YHH3_k127_1311468_11 PFAM Peptidase family U32 - - - 0.000000000000000000000000000000000000000002519 168.0
YHH3_k127_1311468_12 peptidase U32 - - - 0.0000000000000000000000000000000000000000859 162.0
YHH3_k127_1311468_13 4Fe-4S binding domain K00176 - 1.2.7.3 0.000000000000000000004305 94.0
YHH3_k127_1311468_14 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000002499 89.0
YHH3_k127_1311468_15 - - - - 0.0000002439 53.0
YHH3_k127_1311468_16 Alpha-tubulin suppressor and related RCC1 domain-containing - - - 0.00004859 54.0
YHH3_k127_1311468_2 Pyruvate:ferredoxin oxidoreductase core domain II K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 521.0
YHH3_k127_1311468_3 Evidence 2b Function of strongly homologous gene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003223 465.0
YHH3_k127_1311468_4 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 368.0
YHH3_k127_1311468_5 anion transporter K08193 GO:0003674,GO:0005215,GO:0005315,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006720,GO:0006721,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0008643,GO:0009507,GO:0009526,GO:0009528,GO:0009536,GO:0009706,GO:0009941,GO:0009987,GO:0010028,GO:0015075,GO:0015144,GO:0015145,GO:0015229,GO:0015291,GO:0015318,GO:0015711,GO:0015749,GO:0015849,GO:0015882,GO:0016020,GO:0016021,GO:0016108,GO:0016116,GO:0016122,GO:0019866,GO:0022804,GO:0022857,GO:0031090,GO:0031224,GO:0031967,GO:0031969,GO:0031975,GO:0034219,GO:0034220,GO:0035461,GO:0042170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046942,GO:0046943,GO:0051119,GO:0051179,GO:0051180,GO:0051181,GO:0051182,GO:0051184,GO:0051185,GO:0051234,GO:0055085,GO:0071702,GO:0071704,GO:0090482,GO:0098656,GO:1903825,GO:1905039 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 339.0
YHH3_k127_1311468_6 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005483 309.0
YHH3_k127_1311468_7 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000007396 258.0
YHH3_k127_1311468_8 ACT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000005334 230.0
YHH3_k127_1311468_9 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.00000000000000000000000000000000000000000000007796 172.0
YHH3_k127_1404055_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 499.0
YHH3_k127_1404055_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 412.0
YHH3_k127_1404055_10 Ribosomal L27 protein K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000004115 121.0
YHH3_k127_1404055_2 3-dehydroquinate synthase (EC 4.6.1.3) K11646 - 1.4.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 412.0
YHH3_k127_1404055_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 396.0
YHH3_k127_1404055_4 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008009 379.0
YHH3_k127_1404055_5 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009389 366.0
YHH3_k127_1404055_6 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 359.0
YHH3_k127_1404055_7 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005814 313.0
YHH3_k127_1404055_8 PFAM Carbamoyltransferase K00612 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000175 288.0
YHH3_k127_1404055_9 Thymidylate synthase K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000004348 267.0
YHH3_k127_1426681_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11747 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004154 360.0
YHH3_k127_1426681_1 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000002896 231.0
YHH3_k127_1426681_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K10819 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000004312 220.0
YHH3_k127_1426681_3 Response regulator receiver K07668 - - 0.000000000000000000000000000000000000000000000000000000002901 208.0
YHH3_k127_1426681_4 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000004217 166.0
YHH3_k127_1426681_5 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02768 - 2.7.1.202 0.00000000000000000000000000003566 136.0
YHH3_k127_1442419_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 513.0
YHH3_k127_1442419_1 Bacterial regulatory protein, Fis family K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009615 511.0
YHH3_k127_1442419_2 aspartate ornithine carbamoyltransferase, carbamoyl-P binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000259 114.0
YHH3_k127_1442864_0 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 306.0
YHH3_k127_1442864_1 Membrane-associated phospholipid phosphatase K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000000000001583 190.0
YHH3_k127_1442864_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.00000000000002414 75.0
YHH3_k127_1455502_0 Domains REC, sigma54 interaction, HTH8 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 399.0
YHH3_k127_1455502_1 Belongs to the peptidase S8 family K13276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 331.0
YHH3_k127_1455502_2 Belongs to the peptidase S8 family K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 315.0
YHH3_k127_1455502_3 TonB-dependent Receptor Plug Domain - - - 0.00000000000000000000000000000000000000000000000000000001549 221.0
YHH3_k127_1455502_5 PFAM Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain K07005 - - 0.00007521 51.0
YHH3_k127_1470465_0 Belongs to the RtcB family K14415 - 6.5.1.3 5.913e-211 665.0
YHH3_k127_1470465_1 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 608.0
YHH3_k127_1470465_10 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000006942 191.0
YHH3_k127_1470465_11 PFAM short-chain dehydrogenase reductase SDR K00068,K03366,K08261 - 1.1.1.140,1.1.1.304,1.1.1.76,1.1.99.21 0.0000000000000000000000000000000000000000000203 172.0
YHH3_k127_1470465_12 peptidase U32 - - - 0.00000000000000000000000000000000000001371 155.0
YHH3_k127_1470465_13 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000000000186 145.0
YHH3_k127_1470465_14 Archease protein family (MTH1598/TM1083) - - - 0.00000000000000000000000003261 115.0
YHH3_k127_1470465_16 nucleosidase K01239,K01243 - 3.2.2.1,3.2.2.9 0.00000000000334 75.0
YHH3_k127_1470465_17 Protein of unknown function (DUF861) K06995 - - 0.0006156 49.0
YHH3_k127_1470465_2 PFAM ribonuclease II K01147,K12573 - 3.1.13.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006235 417.0
YHH3_k127_1470465_3 PFAM NAD-dependent epimerase dehydratase K01784,K02473 - 5.1.3.2,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000065 368.0
YHH3_k127_1470465_4 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 349.0
YHH3_k127_1470465_5 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004182 340.0
YHH3_k127_1470465_6 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007563 312.0
YHH3_k127_1470465_7 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000007143 244.0
YHH3_k127_1470465_8 UbiA prenyltransferase family K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000001629 205.0
YHH3_k127_1470465_9 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000000005143 188.0
YHH3_k127_147634_0 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 467.0
YHH3_k127_147634_1 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000002306 263.0
YHH3_k127_147634_2 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000000000000001033 164.0
YHH3_k127_147634_3 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0000000007394 63.0
YHH3_k127_147634_4 energy transducer activity K03832 - - 0.0006314 45.0
YHH3_k127_1517492_0 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 407.0
YHH3_k127_1517492_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 415.0
YHH3_k127_1517492_2 oxidoreductase, alpha subunit K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 365.0
YHH3_k127_1517492_3 ferredoxin oxidoreductase beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 326.0
YHH3_k127_1517492_4 SMART phosphoesterase PHP domain protein K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 297.0
YHH3_k127_1517492_5 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.0000000000000000000000000000000000000000000000002169 183.0
YHH3_k127_1599029_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 3.798e-264 831.0
YHH3_k127_1599029_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 8.89e-253 793.0
YHH3_k127_1599029_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 441.0
YHH3_k127_1599029_3 domain, Protein - - - 0.000001688 61.0
YHH3_k127_1660492_0 TIGRFAM UTP--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 295.0
YHH3_k127_1660492_1 self proteolysis - - - 0.000000000000000000000000000004506 132.0
YHH3_k127_1660492_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000005777 59.0
YHH3_k127_1674345_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 7.339e-221 700.0
YHH3_k127_1674345_1 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 387.0
YHH3_k127_1674345_2 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007646 274.0
YHH3_k127_1674345_3 Cytidylate kinase K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000002939 233.0
YHH3_k127_1674345_4 Thiamine-binding protein - - - 0.00000000000000000000000003239 111.0
YHH3_k127_1674345_5 Glycogen recognition site of AMP-activated protein kinase - - - 0.0000000000000000000004512 98.0
YHH3_k127_1674345_6 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000001219 93.0
YHH3_k127_1681175_0 SMART Chromosomal replication initiator DnaA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 389.0
YHH3_k127_1681175_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 395.0
YHH3_k127_1681175_2 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 356.0
YHH3_k127_1681175_3 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000004749 236.0
YHH3_k127_1681175_4 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000001833 211.0
YHH3_k127_1681175_5 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000002182 173.0
YHH3_k127_1681175_6 - - - - 0.000000000000000000000000000000000000000000007115 181.0
YHH3_k127_1681175_7 endonuclease containing a URI domain K07461 - - 0.000000000000000000000000000000000008638 138.0
YHH3_k127_1681175_8 - - - - 0.0000000000000000000000000000001789 142.0
YHH3_k127_1681175_9 - K14340 - - 0.000000000000000000000004053 117.0
YHH3_k127_1726119_0 TIGRFAM hydro-lyases, Fe-S type, tartrate fumarate subfamily, alpha region K01677 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006453 382.0
YHH3_k127_1726119_1 PFAM VacJ family lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000006366 229.0
YHH3_k127_1726119_2 Uncharacterised ArCR, COG2043 - - - 0.000000000000000000009706 101.0
YHH3_k127_1726119_3 DSBA-like thioredoxin domain - - - 0.000002317 53.0
YHH3_k127_1879018_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 524.0
YHH3_k127_1879018_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 442.0
YHH3_k127_1879018_2 nitric oxide reductase activity - - - 0.0000000000000000000000000000000000000000000004522 171.0
YHH3_k127_1879018_3 FAD binding domain - - - 0.000000000000000000000000000002445 136.0
YHH3_k127_1879018_4 - - - - 0.0000000000000000000000000005881 118.0
YHH3_k127_1879018_5 Protein of unknown function (DUF2283) - - - 0.00000001187 58.0
YHH3_k127_1879018_6 endonuclease containing a URI domain K07461 - - 0.00000006275 57.0
YHH3_k127_1879018_7 von Willebrand factor type A domain K07114 - - 0.0001279 52.0
YHH3_k127_1888539_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K05299 - 1.17.1.10,1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 605.0
YHH3_k127_1888539_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 299.0
YHH3_k127_1888539_2 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003734 281.0
YHH3_k127_1888539_3 heterodisulfide reductase, subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000002252 251.0
YHH3_k127_1888539_4 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.00000000000000000000000000000000000000000009652 163.0
YHH3_k127_1888539_5 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000000000004528 158.0
YHH3_k127_1888539_6 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000519 138.0
YHH3_k127_1888539_7 Nitrate reductase gamma subunit K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000002404 70.0
YHH3_k127_1960712_0 phosphorelay sensor kinase activity - - - 0.000000000000000000000000000000000000000000000000001996 193.0
YHH3_k127_1960712_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000003163 137.0
YHH3_k127_1960712_2 CAAX protease self-immunity K07052 - - 0.00004159 53.0
YHH3_k127_2010927_0 FAD binding domain - - - 0.000000000000000000000000001567 127.0
YHH3_k127_2010927_1 cell cycle K05589 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0030428,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044464,GO:0051301,GO:0071944 - 0.0000168 52.0
YHH3_k127_2036295_0 Thioredoxin - - - 0.0000000000000000000000000000000000002929 159.0
YHH3_k127_2036295_2 Thrombospondin type 3 repeat - - - 0.00006018 56.0
YHH3_k127_2116243_0 SMART Chromosomal replication initiator DnaA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007745 381.0
YHH3_k127_2116243_1 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000002874 202.0
YHH3_k127_2116243_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000005515 170.0
YHH3_k127_2116243_3 NUDIX domain - - - 0.00000000000000000000000000000000000003478 150.0
YHH3_k127_2116243_4 COGs COG0318 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01911 - 6.2.1.26 0.0000000000000000000000000000000003697 134.0
YHH3_k127_2116243_5 Domain of unknown function (DUF362) - - - 0.000000000000000000001774 105.0
YHH3_k127_2116243_6 Major Facilitator - - - 0.00001215 53.0
YHH3_k127_2116243_7 Phytochromobilin K08101 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009507,GO:0009536,GO:0009987,GO:0010019,GO:0016491,GO:0016627,GO:0016636,GO:0023052,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0050619,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007 1.3.7.4 0.00003168 53.0
YHH3_k127_2116243_8 Putative zinc-finger - - - 0.0001753 53.0
YHH3_k127_2281171_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 1.426e-205 658.0
YHH3_k127_2281171_1 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006128 555.0
YHH3_k127_2281171_2 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 368.0
YHH3_k127_2281171_3 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000139 242.0
YHH3_k127_2281171_4 3D domain - - - 0.00000000000000002437 82.0
YHH3_k127_2306366_0 Exporters of the RND superfamily K07003 - - 2.054e-299 937.0
YHH3_k127_2306366_1 Belongs to the thiolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006785 535.0
YHH3_k127_2306366_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 396.0
YHH3_k127_2306366_3 Photosynthesis system II assembly factor YCF48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006118 351.0
YHH3_k127_2306368_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000989 419.0
YHH3_k127_2306368_1 lactate metabolic process K00113,K21834 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000002708 260.0
YHH3_k127_2306368_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000006222 121.0
YHH3_k127_2306368_3 PFAM NADPH-dependent FMN reductase - - - 0.000000000000001738 86.0
YHH3_k127_2306368_4 Flavodoxin - - - 0.0000000019 67.0
YHH3_k127_2306368_5 Belongs to the UPF0251 family - - - 0.000000002856 58.0
YHH3_k127_23146_0 CBS domain containing protein K00974 - 2.7.7.72 1.325e-239 764.0
YHH3_k127_23146_1 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004243 278.0
YHH3_k127_2341439_0 succinate dehydrogenase or fumarate reductase, flavoprotein K00239,K00244 - 1.3.5.1,1.3.5.4 1.207e-213 677.0
YHH3_k127_2341439_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 464.0
YHH3_k127_2341439_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 393.0
YHH3_k127_2341439_3 Cytochrome b(N-terminal)/b6/petB K00410,K00412,K02635,K02637 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000885 351.0
YHH3_k127_2341439_4 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000005129 259.0
YHH3_k127_2341439_5 Rieske [2Fe-2S] domain K00411,K02636,K03886 - 1.10.2.2,1.10.9.1 0.0000000000000000000000000000004435 127.0
YHH3_k127_2341439_7 Fumarase C-terminus K01676 - 4.2.1.2 0.0000002327 52.0
YHH3_k127_2345291_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 432.0
YHH3_k127_2345291_1 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 - 1.1.1.25,4.2.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000648 277.0
YHH3_k127_2345291_2 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000009674 214.0
YHH3_k127_2345291_3 - - - - 0.000000000000000000000000000000000000000000000000000000000001185 219.0
YHH3_k127_2345291_4 Protein of unknown function (DUF1232) - - - 0.0000000000000000000000000000000000000000001964 163.0
YHH3_k127_2345291_5 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000005198 147.0
YHH3_k127_2345291_6 - - - - 0.0000000002217 64.0
YHH3_k127_2345291_7 Belongs to the acetyltransferase family. ArgA subfamily - - - 0.000000002629 63.0
YHH3_k127_2345291_8 chlorophyll binding - - - 0.00001346 56.0
YHH3_k127_2358786_0 Domain of unknown function (DUF1998) K06877 - - 1.23e-281 882.0
YHH3_k127_2358786_1 PFAM Amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008467 541.0
YHH3_k127_2358786_2 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000462 208.0
YHH3_k127_241240_0 PFAM NADH-ubiquinone oxidoreductase, chain 49kDa K00333,K12142,K15830 GO:0003674,GO:0005488,GO:0016151,GO:0043167,GO:0043169,GO:0046872,GO:0046914 1.6.5.3 3.645e-254 794.0
YHH3_k127_241240_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00336 - 1.6.5.3 3.312e-234 742.0
YHH3_k127_241240_10 Belongs to the sulfur carrier protein TusA family K04085 - - 0.00000000000000000000000000000000000002007 151.0
YHH3_k127_241240_11 spore germination K00442,K08315 - 3.4.23.51 0.000000000000000000000000000000006173 133.0
YHH3_k127_241240_2 PFAM NADH Ubiquinone plastoquinone (complex I) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003704 558.0
YHH3_k127_241240_3 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 466.0
YHH3_k127_241240_4 PFAM oxidoreductase FAD NAD(P)-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008778 369.0
YHH3_k127_241240_5 PFAM respiratory-chain NADH dehydrogenase, subunit 1 K14087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 364.0
YHH3_k127_241240_6 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 344.0
YHH3_k127_241240_7 Belongs to the complex I 20 kDa subunit family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 306.0
YHH3_k127_241240_8 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K12143,K15831 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005948 266.0
YHH3_k127_241240_9 Dihydrodipicolinate synthetase family - - - 0.00000000000000000000000000000000000000000000000002406 191.0
YHH3_k127_2414637_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005256 462.0
YHH3_k127_2414637_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002572 303.0
YHH3_k127_2414637_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000003259 237.0
YHH3_k127_2414637_4 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000008467 110.0
YHH3_k127_2414637_5 - - - - 0.0000009179 55.0
YHH3_k127_242387_0 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000003734 257.0
YHH3_k127_242387_1 Poly A polymerase head domain K00970,K00974,K07276,K19545 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000002067 265.0
YHH3_k127_2452684_0 protein kinase activity K06915 - - 9.33e-291 913.0
YHH3_k127_2452684_1 DNA polymerase A domain K02335 - 2.7.7.7 9.314e-280 886.0
YHH3_k127_2452684_2 transposase K07492 - - 0.000000000000000000000000000000005864 133.0
YHH3_k127_2456981_0 Aldehyde dehydrogenase family K00130 - 1.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 499.0
YHH3_k127_2456981_1 Permease family K06901 GO:0003674,GO:0005215,GO:0005345,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006863,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015205,GO:0015207,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0015851,GO:0015853,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:0098655,GO:0098660,GO:0098662,GO:1902600,GO:1904823 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004536 452.0
YHH3_k127_2456981_10 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001573 281.0
YHH3_k127_2456981_11 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 GO:0000166,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0003999,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0012505,GO:0016192,GO:0016208,GO:0016740,GO:0016757,GO:0016763,GO:0017076,GO:0018130,GO:0019438,GO:0030141,GO:0030554,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0034641,GO:0034654,GO:0034774,GO:0036094,GO:0036230,GO:0042119,GO:0043094,GO:0043101,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046483,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0060205,GO:0070013,GO:0071704,GO:0072521,GO:0072522,GO:0097159,GO:0097367,GO:0097708,GO:0099503,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000156 222.0
YHH3_k127_2456981_12 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000009539 211.0
YHH3_k127_2456981_13 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000001331 188.0
YHH3_k127_2456981_14 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.0000000000000000000000000000000003661 132.0
YHH3_k127_2456981_15 Sh3 type 3 domain protein - - - 0.000000000000000000000000000000004321 138.0
YHH3_k127_2456981_16 Uridine phosphorylase K00757 - 2.4.2.3 0.0000000000000000000000000000003146 134.0
YHH3_k127_2456981_17 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000002718 120.0
YHH3_k127_2456981_18 L-fuculose phosphate aldolase K01628 K01628 - 4.1.2.17 0.0000000000000000000000002931 118.0
YHH3_k127_2456981_19 - - - - 0.000000000000000000139 90.0
YHH3_k127_2456981_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 444.0
YHH3_k127_2456981_20 PFAM regulatory protein MarR K15973 - - 0.00000000000000000121 91.0
YHH3_k127_2456981_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009492 390.0
YHH3_k127_2456981_4 DNA photolyase activity K03716 - 4.1.99.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 357.0
YHH3_k127_2456981_5 Exporters of the RND superfamily K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 374.0
YHH3_k127_2456981_6 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003229 348.0
YHH3_k127_2456981_7 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 344.0
YHH3_k127_2456981_8 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 367.0
YHH3_k127_2456981_9 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003688 311.0
YHH3_k127_250130_0 Thermophilic metalloprotease (M29) K19689 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009623 545.0
YHH3_k127_250130_1 Rhomboid family K19225 - 3.4.21.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001269 278.0
YHH3_k127_250130_2 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.00000000000000000009652 93.0
YHH3_k127_2552407_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 441.0
YHH3_k127_2552407_1 type IV pilus secretin PilQ K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002455 292.0
YHH3_k127_2552407_10 OmpA family K02557 - - 0.000000000000000000000001775 119.0
YHH3_k127_2552407_11 PFAM Transposase IS66 family K07484 - - 0.00000002055 60.0
YHH3_k127_2552407_2 FAD linked oxidase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003555 274.0
YHH3_k127_2552407_3 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000002905 222.0
YHH3_k127_2552407_4 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000003278 205.0
YHH3_k127_2552407_5 Semialdehyde dehydrogenase, NAD binding domain K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000004243 207.0
YHH3_k127_2552407_6 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000368 188.0
YHH3_k127_2552407_7 Ribosomal protein S9/S16 K02996 - - 0.000000000000000000000000000000000000000001138 162.0
YHH3_k127_2552407_8 FAD linked oxidase domain protein K00104 - 1.1.3.15 0.00000000000000000000000000004642 134.0
YHH3_k127_2552407_9 PFAM PfkB domain protein K00856 - 2.7.1.20 0.0000000000000000000000002911 106.0
YHH3_k127_2562746_0 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 531.0
YHH3_k127_2568937_0 Nickel-dependent hydrogenase K00436,K14126 - 1.12.1.2,1.8.98.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 502.0
YHH3_k127_2568937_1 Oxidoreductase NAD-binding domain K15765 - 1.18.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 344.0
YHH3_k127_2568937_10 Helix-turn-helix domain - - - 0.000000001394 62.0
YHH3_k127_2568937_11 hydrogenase maturation protease K03605 - - 0.0000000797 61.0
YHH3_k127_2568937_12 - - - - 0.0002285 50.0
YHH3_k127_2568937_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 354.0
YHH3_k127_2568937_3 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006676 303.0
YHH3_k127_2568937_4 Oxidoreductase NAD-binding domain K15765 - 1.18.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000001091 269.0
YHH3_k127_2568937_5 Peptidyl-prolyl cis-trans isomerase K01802,K03767,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000003808 227.0
YHH3_k127_2568937_6 PhoQ Sensor - - - 0.000000000000000000000000000000000000000002151 177.0
YHH3_k127_2568937_7 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000001353 154.0
YHH3_k127_2568937_8 FAD binding domain - - - 0.00000000000000000000007416 110.0
YHH3_k127_2568937_9 Metallo-beta-lactamase superfamily - - - 0.0000000000000000001441 98.0
YHH3_k127_2751797_0 smart pdz dhr glgf K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 438.0
YHH3_k127_2751797_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009823 400.0
YHH3_k127_2751797_2 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006455 332.0
YHH3_k127_2751797_3 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000002908 228.0
YHH3_k127_2751797_4 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000002017 177.0
YHH3_k127_2751797_5 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000003125 95.0
YHH3_k127_2751797_6 cell wall organization K01448 - 3.5.1.28 0.0000000000000006838 90.0
YHH3_k127_2751797_7 electron transfer flavoprotein K03522,K22432 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016627,GO:0016628,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363 1.3.1.108 0.00000000229 68.0
YHH3_k127_2782791_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 4.154e-223 728.0
YHH3_k127_2782791_1 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 592.0
YHH3_k127_2782791_10 Fibrobacter succinogenes major domain (Fib_succ_major) - - - 0.00000000000000000000000000000000000003154 152.0
YHH3_k127_2782791_11 - - - - 0.0000000000000000000000000000000000001685 150.0
YHH3_k127_2782791_12 Hep Hag repeat protein - - - 0.0000000000000000000000000000000000007223 156.0
YHH3_k127_2782791_13 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000002049 132.0
YHH3_k127_2782791_14 - - - - 0.0000000000000000000009623 99.0
YHH3_k127_2782791_15 L-2-amino-thiazoline-4-carboxylic acid hydrolase - - - 0.000000000000001307 88.0
YHH3_k127_2782791_16 Pyridoxamine 5'-phosphate oxidase K00275 - 1.4.3.5 0.000000000000003199 82.0
YHH3_k127_2782791_17 Bacterial regulatory proteins, tetR family - - - 0.000000000001816 76.0
YHH3_k127_2782791_18 - - - - 0.000000000002758 75.0
YHH3_k127_2782791_19 cellulose binding K01179,K21449 - 3.2.1.4 0.000000007699 69.0
YHH3_k127_2782791_2 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005883 336.0
YHH3_k127_2782791_20 Thrombospondin type 3 repeat - - - 0.00001032 59.0
YHH3_k127_2782791_22 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.00002705 49.0
YHH3_k127_2782791_23 Subtilase family K13274 - - 0.00005038 53.0
YHH3_k127_2782791_24 Putative esterase - - - 0.00009224 54.0
YHH3_k127_2782791_25 Protein of unknown function (DUF1566) - - - 0.00009487 54.0
YHH3_k127_2782791_26 Cytochrome c7 and related cytochrome c - - - 0.0003627 47.0
YHH3_k127_2782791_27 - - - - 0.0008835 45.0
YHH3_k127_2782791_3 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001018 268.0
YHH3_k127_2782791_4 cyclic diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000002325 227.0
YHH3_k127_2782791_5 lyase activity - - - 0.000000000000000000000000000000000000000000004085 186.0
YHH3_k127_2782791_6 Enoyl-CoA hydratase - - - 0.00000000000000000000000000000000000000000003211 169.0
YHH3_k127_2782791_7 extracellular matrix structural constituent - - - 0.0000000000000000000000000000000000000000007308 172.0
YHH3_k127_2782791_8 DNA topoisomerase (ATP-hydrolyzing) inhibitor activity K13652 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000001083 162.0
YHH3_k127_2782791_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K03585 - - 0.000000000000000000000000000000000000000004337 170.0
YHH3_k127_2832297_0 PFAM AMP-dependent synthetase and ligase K01897,K22319 - 6.1.3.1,6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005556 367.0
YHH3_k127_2832297_1 NIF3 (NGG1p interacting factor 3) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 296.0
YHH3_k127_2832297_2 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000000002152 129.0
YHH3_k127_2832297_3 3-beta hydroxysteroid dehydrogenase K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000002407 120.0
YHH3_k127_2832297_4 2-oxoacid dehydrogenases acyltransferase (catalytic domain) - - - 0.00000000000000000001597 100.0
YHH3_k127_2832297_5 Ribbon-helix-helix domain - - - 0.0000004986 53.0
YHH3_k127_3025923_0 MFS/sugar transport protein - - - 0.0000000000000000000000000000000000000000000001335 186.0
YHH3_k127_3025923_1 - - - - 0.0000000000000000003705 96.0
YHH3_k127_3025923_2 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0003824,GO:0004109,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0016634,GO:0018130,GO:0019438,GO:0030145,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046906,GO:0046914,GO:0046983,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.3.3.3 0.000000000008361 75.0
YHH3_k127_3025923_3 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.0000008935 59.0
YHH3_k127_3025923_4 Phytochromobilin ferredoxin oxidoreductase K08101 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009507,GO:0009536,GO:0009987,GO:0010019,GO:0016491,GO:0016627,GO:0016636,GO:0023052,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0050619,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007 1.3.7.4 0.0001613 52.0
YHH3_k127_3028576_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 6.618e-261 820.0
YHH3_k127_3028576_1 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 331.0
YHH3_k127_3028576_2 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003521 296.0
YHH3_k127_3028576_3 Argininosuccinate lyase C-terminal K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000000000000000000000000000000000000000000000000006295 184.0
YHH3_k127_3028576_4 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000008268 170.0
YHH3_k127_3028576_5 - - - - 0.0000000000000000000000000003215 130.0
YHH3_k127_3028576_6 Sporulation and spore germination - - - 0.0000000000000000000000125 108.0
YHH3_k127_3028576_7 NifU-like domain - - - 0.0000000000000000000000721 99.0
YHH3_k127_3028576_8 Glycosyl transferase family 41 - - - 0.000000000000000007521 95.0
YHH3_k127_3028576_9 - - - - 0.000000004753 60.0
YHH3_k127_3055941_0 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 573.0
YHH3_k127_3055941_1 Desulfoferrodoxin ferrous iron-binding K05919 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006091,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009055,GO:0009636,GO:0009987,GO:0010035,GO:0016491,GO:0016721,GO:0019430,GO:0022900,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.2 0.000000000000000000000000000000000000000000002743 167.0
YHH3_k127_3078052_0 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006487 387.0
YHH3_k127_3078052_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 368.0
YHH3_k127_3078052_2 TIGRFAM carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.000002895 52.0
YHH3_k127_312747_0 Putative nucleotidyltransferase substrate binding domain K07182 - - 0.0 1148.0
YHH3_k127_312747_1 PFAM Formate--tetrahydrofolate ligase K01938 - 6.3.4.3 0.0 1056.0
YHH3_k127_312747_10 metallophosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 299.0
YHH3_k127_312747_11 Putative nucleotidyltransferase substrate binding domain K07182 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 308.0
YHH3_k127_312747_12 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003653 263.0
YHH3_k127_312747_13 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000004905 256.0
YHH3_k127_312747_14 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000006492 262.0
YHH3_k127_312747_15 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000002488 211.0
YHH3_k127_312747_16 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.00000000000000000000000000000000000000000003578 170.0
YHH3_k127_312747_17 Zn-dependent protease K06974 - - 0.000000000000000000000000000000000006402 142.0
YHH3_k127_312747_18 Protein of unknown function, DUF485 - - - 0.000000000000000000000000002319 113.0
YHH3_k127_312747_19 PFAM glycine cleavage H-protein - - - 0.00000000000000000000000001962 119.0
YHH3_k127_312747_2 Sodium:solute symporter family K14393 - - 1.612e-303 940.0
YHH3_k127_312747_20 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.00000000002391 73.0
YHH3_k127_312747_3 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.276e-297 925.0
YHH3_k127_312747_4 Conserved carboxylase domain K01960 - 6.4.1.1 7.66e-222 703.0
YHH3_k127_312747_5 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 1.718e-207 664.0
YHH3_k127_312747_6 PFAM major facilitator superfamily MFS_1 K08177 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 554.0
YHH3_k127_312747_7 phosphorelay signal transduction system K02481,K07713,K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005242 511.0
YHH3_k127_312747_8 PFAM histone deacetylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004435 381.0
YHH3_k127_312747_9 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 313.0
YHH3_k127_3176115_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01006 - 2.7.9.1 0.0 1312.0
YHH3_k127_3176115_1 Catalyzes the attachment of glycine to tRNA(Gly) K01880 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009345,GO:0009987,GO:0010467,GO:0016070,GO:0016594,GO:0016597,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042165,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046983,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.14 1.079e-195 618.0
YHH3_k127_3176115_10 Diguanylate cyclase K21084 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000004138 250.0
YHH3_k127_3176115_11 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000002026 204.0
YHH3_k127_3176115_12 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000009265 181.0
YHH3_k127_3176115_13 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.0000000000000000000000000000000000000000000005562 183.0
YHH3_k127_3176115_14 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000007155 126.0
YHH3_k127_3176115_15 - - - - 0.000000000000000000004523 98.0
YHH3_k127_3176115_16 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000001457 99.0
YHH3_k127_3176115_17 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000005712 100.0
YHH3_k127_3176115_18 FAD binding domain - - - 0.00000000000000001093 91.0
YHH3_k127_3176115_19 energy transducer activity K03832 - - 0.000000000000007811 79.0
YHH3_k127_3176115_2 lipoprotein localization to outer membrane K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 447.0
YHH3_k127_3176115_20 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity K02440,K06188 - - 0.0000000009356 60.0
YHH3_k127_3176115_21 Transposase - - - 0.000000007407 57.0
YHH3_k127_3176115_23 COG2801 Transposase and inactivated derivatives K07497 - - 0.00006381 46.0
YHH3_k127_3176115_24 protein histidine kinase activity K03320 - - 0.0006155 53.0
YHH3_k127_3176115_3 Peptidase family M20/M25/M40 K01270 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005526 411.0
YHH3_k127_3176115_4 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 371.0
YHH3_k127_3176115_5 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000847 371.0
YHH3_k127_3176115_6 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 355.0
YHH3_k127_3176115_7 PFAM PKD domain containing protein K11751 - 3.1.3.5,3.6.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 359.0
YHH3_k127_3176115_8 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006086 315.0
YHH3_k127_3176115_9 SurA N-terminal domain K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000009885 261.0
YHH3_k127_3232794_0 Cysteine-rich domain K08264 - 1.8.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008059 328.0
YHH3_k127_3232794_1 FAD linked oxidase domain protein - - - 0.000000001582 59.0
YHH3_k127_3232794_2 FAD linked oxidase domain protein K00104 - 1.1.3.15 0.0007555 45.0
YHH3_k127_3268682_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1369.0
YHH3_k127_3268682_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.698e-270 840.0
YHH3_k127_3268682_10 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 466.0
YHH3_k127_3268682_11 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 465.0
YHH3_k127_3268682_12 Exporters of the RND superfamily K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003668 485.0
YHH3_k127_3268682_13 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 451.0
YHH3_k127_3268682_14 Phosphohydrolase-associated domain K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006263 441.0
YHH3_k127_3268682_15 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005468 428.0
YHH3_k127_3268682_16 PDZ DHR GLGF domain protein K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 398.0
YHH3_k127_3268682_17 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 383.0
YHH3_k127_3268682_18 signal transduction Histidine kinase K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 380.0
YHH3_k127_3268682_2 PFAM Ketose-bisphosphate aldolase, class-II K01624 - 4.1.2.13 2.053e-209 657.0
YHH3_k127_3268682_20 Cell cycle protein K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 362.0
YHH3_k127_3268682_21 Mur ligase family, catalytic domain K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 355.0
YHH3_k127_3268682_22 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09697 - 3.6.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 344.0
YHH3_k127_3268682_24 UbiA prenyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009168 315.0
YHH3_k127_3268682_25 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 319.0
YHH3_k127_3268682_26 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004873 288.0
YHH3_k127_3268682_27 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007013 285.0
YHH3_k127_3268682_28 argininosuccinate lyase K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000034 289.0
YHH3_k127_3268682_29 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007489 260.0
YHH3_k127_3268682_3 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009381 608.0
YHH3_k127_3268682_30 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000008675 251.0
YHH3_k127_3268682_31 transport system involved in gliding motility, auxiliary K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000406 252.0
YHH3_k127_3268682_32 transcriptional regulator sugar kinase K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000002951 243.0
YHH3_k127_3268682_33 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000001783 238.0
YHH3_k127_3268682_34 RadC-like JAB domain K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000002348 231.0
YHH3_k127_3268682_35 Probably functions as a manganese efflux pump - - - 0.000000000000000000000000000000000000000000000000000000000000001231 224.0
YHH3_k127_3268682_36 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000001164 222.0
YHH3_k127_3268682_37 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000002992 213.0
YHH3_k127_3268682_38 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000004915 223.0
YHH3_k127_3268682_39 aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0000000000000000000000000000000000000000000000000000000002692 226.0
YHH3_k127_3268682_4 UDP-N-acetylmuramate-L-alanine ligase activity K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005185 568.0
YHH3_k127_3268682_40 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000002104 199.0
YHH3_k127_3268682_41 histidine kinase, dimerisation and phosphoacceptor region - - - 0.000000000000000000000000000000000000000000000000000006589 207.0
YHH3_k127_3268682_42 MgtC family K07507 - - 0.0000000000000000000000000000000000000000000000000008459 191.0
YHH3_k127_3268682_43 Domains REC, sigma54 interaction, HTH8 - - - 0.000000000000000000000000000000000000000000000000003926 198.0
YHH3_k127_3268682_44 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000004962 173.0
YHH3_k127_3268682_45 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.000000000000000000000000000000000000000002169 156.0
YHH3_k127_3268682_46 - - - - 0.000000000000000000000000000000000000006725 164.0
YHH3_k127_3268682_47 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000857 148.0
YHH3_k127_3268682_48 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.000000000000000000000000000000000001069 144.0
YHH3_k127_3268682_49 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000005562 154.0
YHH3_k127_3268682_5 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005497 553.0
YHH3_k127_3268682_50 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000001202 138.0
YHH3_k127_3268682_51 Cell division protein FtsQ K03589 - - 0.00000000000000000000000000000003635 138.0
YHH3_k127_3268682_52 Photosynthesis system II assembly factor YCF48 - - - 0.0000000000000000000000000000004099 136.0
YHH3_k127_3268682_53 Proto-chlorophyllide reductase 57 kD subunit - - - 0.000000000000000000000000000002091 132.0
YHH3_k127_3268682_54 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000005335 123.0
YHH3_k127_3268682_55 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.000000000000000000000000001001 117.0
YHH3_k127_3268682_56 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356,K03503 - 3.4.21.88 0.00000000000000000000000000119 114.0
YHH3_k127_3268682_57 HD domain - - - 0.00000000000000000000000004401 112.0
YHH3_k127_3268682_58 Cold shock K03704 - - 0.000000000000000000000002197 103.0
YHH3_k127_3268682_59 - - - - 0.0000000000000000000005236 103.0
YHH3_k127_3268682_6 aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005464 518.0
YHH3_k127_3268682_60 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000003257 98.0
YHH3_k127_3268682_61 Multidrug Resistance protein K03297 - - 0.00000000000000004168 86.0
YHH3_k127_3268682_62 - - - - 0.00000000000003191 74.0
YHH3_k127_3268682_63 4Fe-4S dicluster domain - - - 0.00000001305 58.0
YHH3_k127_3268682_64 cell division protein FtsL - - - 0.00000008574 59.0
YHH3_k127_3268682_65 FMN binding - - - 0.0000002084 61.0
YHH3_k127_3268682_66 Domain of unknown function (DUF4340) - - - 0.000002085 57.0
YHH3_k127_3268682_7 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006841 528.0
YHH3_k127_3268682_8 Sigma-70 factor, region 1.1 K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 518.0
YHH3_k127_3268682_9 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 482.0
YHH3_k127_3303409_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1149.0
YHH3_k127_3303409_1 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 322.0
YHH3_k127_3303409_10 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000005405 62.0
YHH3_k127_3303409_2 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009493 294.0
YHH3_k127_3303409_3 - - - - 0.0000000000000000000000000000000002141 133.0
YHH3_k127_3303409_4 YGGT family K02221 - - 0.0000000000000000000000000000000007982 133.0
YHH3_k127_3303409_5 DUF167 K09131 - - 0.0000000000000000000000001505 109.0
YHH3_k127_3303409_6 DivIVA protein K04074 - - 0.000000000000000000000003213 108.0
YHH3_k127_3303409_7 Putative addiction module component - - - 0.0000000000000007711 79.0
YHH3_k127_3303409_8 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000000001682 68.0
YHH3_k127_3303409_9 Ribbon-helix-helix protein, copG family - - - 0.00000000002416 67.0
YHH3_k127_3329248_0 Sporulation initiation inhibitor protein Soj K03496 - - 0.00000000000000000000000000000000000000000000000000004286 199.0
YHH3_k127_3329248_1 Dodecin K09165 - - 0.000000000000000000000002494 103.0
YHH3_k127_3351693_0 PFAM ABC transporter K06158 - - 1.693e-240 757.0
YHH3_k127_3351693_1 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0071704,GO:1901135,GO:1901576 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 507.0
YHH3_k127_3351693_10 Belongs to the ParA family K04562 - - 0.0000000001378 73.0
YHH3_k127_3351693_11 Ribbon-helix-helix domain - - - 0.00001153 49.0
YHH3_k127_3351693_12 nuclease of the RecB family - - - 0.00002453 55.0
YHH3_k127_3351693_13 Iron-sulfur cluster assembly accessory protein K13628 - - 0.00006319 49.0
YHH3_k127_3351693_2 Transglycosylase SLT domain K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 499.0
YHH3_k127_3351693_3 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 418.0
YHH3_k127_3351693_4 radical SAM domain protein K04070 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007067 323.0
YHH3_k127_3351693_5 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 306.0
YHH3_k127_3351693_6 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 299.0
YHH3_k127_3351693_7 sporulation initiation inhibitor protein Soj K03496 - - 0.0000000000000000000000000000000000000000000000000000004876 207.0
YHH3_k127_3351693_8 Glycogen recognition site of AMP-activated protein kinase - - - 0.00000000000089 68.0
YHH3_k127_3351693_9 - - - - 0.000000000005531 71.0
YHH3_k127_3374514_0 C-terminal, D2-small domain, of ClpB protein K03667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003657 595.0
YHH3_k127_3374514_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 589.0
YHH3_k127_3374514_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 559.0
YHH3_k127_3374514_3 TIGRFAM acetylornithine and succinylornithine K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006331 498.0
YHH3_k127_3374514_4 Amino acid kinase family K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 372.0
YHH3_k127_3374514_5 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3,2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005279 358.0
YHH3_k127_3374514_6 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016787,GO:0017076,GO:0019538,GO:0019904,GO:0022607,GO:0030163,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0051603,GO:0065003,GO:0070003,GO:0070011,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000005608 255.0
YHH3_k127_3374514_7 Fibronectin type 3 domain - - - 0.000000000000000000000000000000000000000000000000005126 195.0
YHH3_k127_3414262_0 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 2.189e-253 815.0
YHH3_k127_3414262_1 Thiolase, C-terminal domain K00626 - 2.3.1.9 4.277e-201 633.0
YHH3_k127_3414262_10 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 336.0
YHH3_k127_3414262_11 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002888 315.0
YHH3_k127_3414262_12 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 316.0
YHH3_k127_3414262_13 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005921 310.0
YHH3_k127_3414262_14 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006368 312.0
YHH3_k127_3414262_15 ABC-type multidrug transport system, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003482 308.0
YHH3_k127_3414262_16 of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000003008 267.0
YHH3_k127_3414262_17 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000004684 229.0
YHH3_k127_3414262_18 PFAM Biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.00000000000000000000000000000000000000000000000000000000000000007535 233.0
YHH3_k127_3414262_19 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000002334 226.0
YHH3_k127_3414262_2 CBS domain K03699 - - 2.024e-195 617.0
YHH3_k127_3414262_20 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000003964 222.0
YHH3_k127_3414262_21 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993 - - 0.0000000000000000000000000000000000000000000000000000000000007483 222.0
YHH3_k127_3414262_22 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 - 4.1.1.98 0.000000000000000000000000000000000000000000000000000000003808 218.0
YHH3_k127_3414262_23 transcriptional regulator - - - 0.0000000000000000000000000000000000000000007308 166.0
YHH3_k127_3414262_24 Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate K02437 - - 0.000000000000000000000000000000000000000003265 158.0
YHH3_k127_3414262_25 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000003621 147.0
YHH3_k127_3414262_26 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000000000003197 141.0
YHH3_k127_3414262_27 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000001277 131.0
YHH3_k127_3414262_28 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000007287 135.0
YHH3_k127_3414262_29 FAD binding domain - - - 0.000000000000000000000000000008836 134.0
YHH3_k127_3414262_3 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 616.0
YHH3_k127_3414262_30 - - - - 0.0000000000000000000000001605 114.0
YHH3_k127_3414262_31 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000008466 115.0
YHH3_k127_3414262_32 23S rRNA-intervening sequence protein - - - 0.0000000000000000000005569 99.0
YHH3_k127_3414262_33 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000001044 100.0
YHH3_k127_3414262_34 Putative regulatory protein - - - 0.0000000000000001196 81.0
YHH3_k127_3414262_35 Bacterial regulatory proteins, tetR family - - - 0.000000000000002056 84.0
YHH3_k127_3414262_36 domain protein K01186 - 3.2.1.18 0.00000000000009287 83.0
YHH3_k127_3414262_37 - - - - 0.0000000001717 70.0
YHH3_k127_3414262_38 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000002999 63.0
YHH3_k127_3414262_39 TIGRFAM DNA binding domain, excisionase family - - - 0.00000294 51.0
YHH3_k127_3414262_4 FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003743 557.0
YHH3_k127_3414262_5 GMP synthase C terminal domain K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007536 445.0
YHH3_k127_3414262_6 Dihydrolipoyl dehydrogenase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007889 428.0
YHH3_k127_3414262_7 Radical SAM superfamily K04070 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 368.0
YHH3_k127_3414262_8 PFAM metal-dependent phosphohydrolase HD sub - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 351.0
YHH3_k127_3414262_9 Elongator protein 3, MiaB family, Radical SAM K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 335.0
YHH3_k127_341593_0 Belongs to the ParA family K04562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 305.0
YHH3_k127_341593_1 Sigma-70, region 4 K02405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001637 269.0
YHH3_k127_341593_2 Histidine kinase K02482 - 2.7.13.3 0.00000000000000000000008075 108.0
YHH3_k127_3418604_0 COGs COG0767 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 413.0
YHH3_k127_3418604_1 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 388.0
YHH3_k127_3418604_2 SMART ABC-type transporter, periplasmic subunit family 3, ionotropic glutamate receptor K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001651 268.0
YHH3_k127_3418604_3 MlaD protein K06192 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003147 249.0
YHH3_k127_3418604_4 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000000000000000004335 172.0
YHH3_k127_3418604_5 PFAM Extracellular solute-binding protein, family 3 K02030 - - 0.00000000000000000000000000000000000000000001956 171.0
YHH3_k127_3418604_6 ABC-type transport auxiliary lipoprotein component K09857 - - 0.00000000000000000000000000000000000000005096 159.0
YHH3_k127_3418604_7 Predicted periplasmic protein (DUF2092) - - - 0.0000000000000000000000000000000000000003157 161.0
YHH3_k127_3418604_8 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0000000000000000000000000003801 113.0
YHH3_k127_3418604_9 - - - - 0.000000000000000000000000001205 126.0
YHH3_k127_3531324_0 Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 1.31e-304 967.0
YHH3_k127_3531324_1 NADH ubiquinone oxidoreductase, NADH-binding K00124,K00335,K18331 - 1.12.1.3,1.6.5.3 8.569e-234 739.0
YHH3_k127_3531324_2 Heterodisulfide reductase subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 309.0
YHH3_k127_3531324_3 Thioredoxin-like [2Fe-2S] ferredoxin K00334,K03388 - 1.6.5.3,1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 308.0
YHH3_k127_3531324_4 PFAM Methylenetetrahydrofolate reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001086 251.0
YHH3_k127_3531324_5 COGs COG1150 Heterodisulfide reductase subunit C K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000208 185.0
YHH3_k127_3531324_6 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.00000000000000000000000000000000000000000000000002153 181.0
YHH3_k127_3531324_7 phosphorelay signal transduction system - - - 0.00000000000000002039 87.0
YHH3_k127_356105_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1038.0
YHH3_k127_356105_1 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 309.0
YHH3_k127_356105_2 RelA SpoT domain protein K07816 - 2.7.6.5 0.0000000000000000000000000000000000000000000003224 176.0
YHH3_k127_356105_3 SWIM zinc finger - - - 0.000000000000000000000007088 108.0
YHH3_k127_3598179_0 PFAM Hydantoinase B oxoprolinase - - - 0.0 1114.0
YHH3_k127_3598179_1 Hydantoinase/oxoprolinase N-terminal region - - - 2.16e-321 997.0
YHH3_k127_3598179_10 Acetone carboxylase gamma subunit - - - 0.0000000000000000000000000000000000000000000000003819 177.0
YHH3_k127_3598179_11 B12 binding domain - - - 0.00000000000000000000000000000000000000000000001519 189.0
YHH3_k127_3598179_12 Lipid A biosynthesis K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000002852 178.0
YHH3_k127_3598179_13 PFAM thioesterase superfamily K02614 - - 0.00000000000000002709 86.0
YHH3_k127_3598179_14 Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.0000000000000001322 80.0
YHH3_k127_3598179_15 Periplasmic or secreted lipoprotein - - - 0.0000000325 59.0
YHH3_k127_3598179_2 Hydantoinase oxoprolinase N-terminal region K01469 - 3.5.2.9 8.439e-257 811.0
YHH3_k127_3598179_3 AMP-binding enzyme C-terminal domain K02182 - 6.2.1.48 4.673e-246 769.0
YHH3_k127_3598179_4 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 1.462e-231 731.0
YHH3_k127_3598179_5 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 2.668e-200 632.0
YHH3_k127_3598179_6 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 309.0
YHH3_k127_3598179_8 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000001802 211.0
YHH3_k127_3598179_9 PFAM amino acid-binding ACT domain protein - - - 0.000000000000000000000000000000000000000000000000001406 191.0
YHH3_k127_3599188_0 Extracellular solute-binding protein, family 5 - - - 1.117e-244 777.0
YHH3_k127_3599188_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 6.547e-223 695.0
YHH3_k127_3599188_10 Memo-like protein K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006324 469.0
YHH3_k127_3599188_11 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 457.0
YHH3_k127_3599188_12 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042,K17468 - 2.9.1.1,4.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 458.0
YHH3_k127_3599188_13 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 441.0
YHH3_k127_3599188_14 transport systems K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003981 423.0
YHH3_k127_3599188_15 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 424.0
YHH3_k127_3599188_16 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 405.0
YHH3_k127_3599188_17 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 355.0
YHH3_k127_3599188_18 Mur ligase, middle domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 363.0
YHH3_k127_3599188_19 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 347.0
YHH3_k127_3599188_2 Required for chromosome condensation and partitioning K03529 - - 8.48e-211 698.0
YHH3_k127_3599188_20 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 352.0
YHH3_k127_3599188_21 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 365.0
YHH3_k127_3599188_22 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 344.0
YHH3_k127_3599188_23 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 336.0
YHH3_k127_3599188_24 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006956 311.0
YHH3_k127_3599188_25 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004478 310.0
YHH3_k127_3599188_26 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 294.0
YHH3_k127_3599188_27 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007037 280.0
YHH3_k127_3599188_28 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002236 283.0
YHH3_k127_3599188_29 Lysin motif K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006473 286.0
YHH3_k127_3599188_3 Belongs to the ABC transporter superfamily K02031,K02032 - - 1.617e-210 676.0
YHH3_k127_3599188_30 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002999 271.0
YHH3_k127_3599188_31 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000012 256.0
YHH3_k127_3599188_32 Belongs to the TrpC family K01609 - 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000003687 246.0
YHH3_k127_3599188_33 Putative pyruvate format-lyase activating enzyme (DUF1786) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002385 248.0
YHH3_k127_3599188_34 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.0000000000000000000000000000000000000000000000000000000000006009 227.0
YHH3_k127_3599188_35 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000001066 216.0
YHH3_k127_3599188_36 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000000000000000005733 209.0
YHH3_k127_3599188_37 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000001996 202.0
YHH3_k127_3599188_38 - - - - 0.000000000000000000000000000000000000000000000000000104 189.0
YHH3_k127_3599188_39 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K20881 - 3.1.3.5 0.000000000000000000000000000000000000000000000000001304 190.0
YHH3_k127_3599188_4 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 GO:0003674,GO:0003824,GO:0004333,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009054 600.0
YHH3_k127_3599188_40 the in vivo substrate is - - - 0.000000000000000000000000000000000000000000000000008562 192.0
YHH3_k127_3599188_41 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000002257 181.0
YHH3_k127_3599188_42 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000001536 174.0
YHH3_k127_3599188_43 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000000000000005381 175.0
YHH3_k127_3599188_44 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000289 161.0
YHH3_k127_3599188_45 PFAM 6-pyruvoyl tetrahydropterin synthase and K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000002372 149.0
YHH3_k127_3599188_46 Major facilitator superfamily - - - 0.000000000000000000000000000000000002445 152.0
YHH3_k127_3599188_47 intermembrane phospholipid transfer K07323 - - 0.00000000000000000000000000000000002474 143.0
YHH3_k127_3599188_48 Isochorismatase family K09020 - 3.5.1.110 0.00000000000000000000000000000006887 132.0
YHH3_k127_3599188_49 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000008219 127.0
YHH3_k127_3599188_5 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K06001 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 578.0
YHH3_k127_3599188_50 50S ribosomal protein L31 K02909 - - 0.00000000000000000000000001165 110.0
YHH3_k127_3599188_51 PFAM Nitroreductase - - - 0.0000000000000000000000001271 114.0
YHH3_k127_3599188_52 PFAM Uncharacterised protein family (UPF0153) - - - 0.000000000000000000001061 98.0
YHH3_k127_3599188_53 Thrombospondin type 3 repeat - - - 0.000000000000000008109 98.0
YHH3_k127_3599188_54 - - - - 0.0000000000000004844 79.0
YHH3_k127_3599188_55 cellulase activity K18197 - 4.2.2.23 0.0000000000000006023 91.0
YHH3_k127_3599188_57 Tetratricopeptide repeat - - - 0.0000000000009579 79.0
YHH3_k127_3599188_58 - - - - 0.000000000004274 74.0
YHH3_k127_3599188_59 YtxH-like protein - - - 0.00000000001318 70.0
YHH3_k127_3599188_6 Anthranilate synthase component I, N terminal region K01657,K13503 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008566 567.0
YHH3_k127_3599188_60 PFAM Tetratricopeptide repeat - - - 0.000001012 62.0
YHH3_k127_3599188_61 Sporulation related domain K03749 - - 0.00001335 57.0
YHH3_k127_3599188_62 - - - - 0.00009202 45.0
YHH3_k127_3599188_7 Belongs to the dGTPase family. Type 2 subfamily K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 509.0
YHH3_k127_3599188_8 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 502.0
YHH3_k127_3599188_9 Pyruvate ferredoxin oxidoreductase and related K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 474.0
YHH3_k127_365784_0 Glycosyl transferase family group 2 K11936 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 465.0
YHH3_k127_365784_1 PFAM Polysaccharide deacetylase K11931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 352.0
YHH3_k127_366123_0 Glycosyl transferase family group 2 K11936 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 473.0
YHH3_k127_366123_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 402.0
YHH3_k127_366123_2 PFAM Polysaccharide deacetylase K11931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 352.0
YHH3_k127_366123_3 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.00000000000000000000004356 104.0
YHH3_k127_3682829_0 Cysteine-rich domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 379.0
YHH3_k127_3682829_1 PFAM response regulator receiver K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001669 263.0
YHH3_k127_3682829_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000003973 231.0
YHH3_k127_3682829_3 Peptidase family U32 - - - 0.00000000000000000000000000000000000000000000000004517 191.0
YHH3_k127_3682829_4 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000001137 96.0
YHH3_k127_3775685_0 Glycosyl hydrolase family 3 N terminal domain - - - 0.00000000000000000000000000000000000008069 147.0
YHH3_k127_3775685_1 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000278 102.0
YHH3_k127_3789805_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1821.0
YHH3_k127_3789805_1 GXGXG motif - - - 0.0 1192.0
YHH3_k127_3789805_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 3e-323 998.0
YHH3_k127_3789805_3 Conserved region in glutamate synthase - - - 4.533e-270 840.0
YHH3_k127_3789805_4 Conserved region in glutamate synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 598.0
YHH3_k127_3789805_5 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006743 314.0
YHH3_k127_3789805_6 Ribosomal protein L11/L12 K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000003327 214.0
YHH3_k127_3789805_7 Ribosomal protein L7/L12 dimerisation domain K02935 - - 0.000000000000000000000000000000000000000001512 160.0
YHH3_k127_3789805_8 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000000000005231 154.0
YHH3_k127_3822970_0 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000008843 272.0
YHH3_k127_3822970_1 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000037 253.0
YHH3_k127_3822970_2 Proto-chlorophyllide reductase 57 kD subunit K11335 - 1.3.7.14,1.3.7.15 0.0000000000000000000000000000000005351 149.0
YHH3_k127_3822970_3 Nitrogenase component 1 type Oxidoreductase K02587 - - 0.0000000000000001604 92.0
YHH3_k127_3822970_4 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000001018 69.0
YHH3_k127_3822970_5 Iron dependent repressor, N-terminal DNA binding domain - GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0000002624 57.0
YHH3_k127_3859647_0 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000009047 218.0
YHH3_k127_3859647_1 Flavodoxin-like fold - - - 0.000000000000000114 90.0
YHH3_k127_3869780_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007849 475.0
YHH3_k127_3869780_1 Triosephosphate isomerase K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003176 314.0
YHH3_k127_3869780_2 Adenosine specific kinase K09129 - - 0.00000000000000000000001596 102.0
YHH3_k127_3869780_3 Preprotein translocase SecG subunit K03075 - - 0.0000000000000000000004617 100.0
YHH3_k127_3880659_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1049.0
YHH3_k127_3880659_1 CobB/CobQ-like glutamine amidotransferase domain K01952 - 6.3.5.3 0.000000000000000003866 85.0
YHH3_k127_3921017_0 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 468.0
YHH3_k127_3921017_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 464.0
YHH3_k127_3921017_10 positive regulation of growth - - - 0.0000000000000000000005427 98.0
YHH3_k127_3921017_11 Glycogen recognition site of AMP-activated protein kinase - - - 0.000000000000000001399 92.0
YHH3_k127_3921017_12 YtxH-like protein - - - 0.000002243 56.0
YHH3_k127_3921017_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007438 462.0
YHH3_k127_3921017_3 sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007062 450.0
YHH3_k127_3921017_4 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 327.0
YHH3_k127_3921017_5 PFAM phosphoesterase, RecJ domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002673 315.0
YHH3_k127_3921017_6 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001985 289.0
YHH3_k127_3921017_7 nuclease activity - GO:0001666,GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016787,GO:0016788,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0034641,GO:0036293,GO:0040008,GO:0043170,GO:0043207,GO:0044237,GO:0044238,GO:0044403,GO:0044419,GO:0045926,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051701,GO:0051704,GO:0051707,GO:0060255,GO:0065007,GO:0070482,GO:0071704,GO:0075136,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:2000112,GO:2000113 - 0.000000000000000000000000000000000000000000000000000001555 194.0
YHH3_k127_3921017_8 SMART Rhodanese domain protein - - - 0.0000000000000000000000000000000000000000005815 162.0
YHH3_k127_3921017_9 Peptidase S24-like K01356 - 3.4.21.88 0.000000000000000000000000000000000003847 139.0
YHH3_k127_395488_0 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 314.0
YHH3_k127_395488_1 Thiamine biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 296.0
YHH3_k127_395488_2 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006484 266.0
YHH3_k127_395488_3 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000002814 253.0
YHH3_k127_395488_4 AsmA-like C-terminal region K07289 - - 0.0000000000000000000000000000000000000000000005608 191.0
YHH3_k127_395488_5 COG3119 Arylsulfatase A and related enzymes - - - 0.00000000000000000000000000000000000000005594 168.0
YHH3_k127_395488_6 - - - - 0.000000000000000000000000001238 122.0
YHH3_k127_395488_7 leucine-rich repeat-containing protein typical subtype K13730 - - 0.00000000000000000000000001607 115.0
YHH3_k127_395488_8 Glycosyltransferase family 87 - - - 0.00000002979 66.0
YHH3_k127_395488_9 - - - - 0.0000003519 59.0
YHH3_k127_396888_0 Malic enzyme K00027 - 1.1.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007882 594.0
YHH3_k127_396888_1 NMT1-like family K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 388.0
YHH3_k127_396888_2 Histidine kinase HAMP K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 360.0
YHH3_k127_396888_3 ABC-type nitrate sulfonate bicarbonate transport system ATPase component K02049,K15555 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 310.0
YHH3_k127_396888_4 Binding-protein-dependent transport system inner membrane component K02050,K15552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 287.0
YHH3_k127_396888_5 transcriptional regulators containing the CopG Arc MetJ DNA-binding domain and a metal-binding domain - - - 0.000007628 50.0
YHH3_k127_4004220_0 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 334.0
YHH3_k127_4004220_1 Involved in chromosome partitioning - - - 0.0000000000000000000000000000285 122.0
YHH3_k127_4070042_0 Molydopterin dinucleotide binding domain K07306,K07309,K07310,K08352 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009390,GO:0009897,GO:0009986,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0022900,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0032991,GO:0033797,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071944,GO:0098552,GO:0098567,GO:1902494 1.8.5.3,1.8.5.5,1.97.1.9 4.921e-232 739.0
YHH3_k127_4070042_1 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 301.0
YHH3_k127_4070042_2 4Fe-4S dicluster domain K00124,K07307 - - 0.000000000000000000000000000000000000000000000000000000000000003364 220.0
YHH3_k127_4070042_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000005604 199.0
YHH3_k127_4134556_0 GIY-YIG catalytic domain K07461 - - 0.000000000000000000000000000000000002479 139.0
YHH3_k127_4134556_1 cellulose binding K12132,K15125,K21449 - 2.7.11.1 0.000000000000004453 89.0
YHH3_k127_4134556_2 peptidase activity, acting on L-amino acid peptides - - - 0.000003847 60.0
YHH3_k127_4134556_3 ABC-type uncharacterized transport system - - - 0.000009967 58.0
YHH3_k127_4134556_4 SMART phosphoesterase PHP domain protein - - - 0.00003099 57.0
YHH3_k127_4134556_5 Endonuclease Exonuclease Phosphatase - - - 0.0003716 54.0
YHH3_k127_4152600_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 4.272e-226 725.0
YHH3_k127_4161103_0 4Fe-4S dicluster domain - - - 0.000000000000000000000000000002802 127.0
YHH3_k127_4161103_1 pyridoxamine 5-phosphate - - - 0.000000000295 69.0
YHH3_k127_4203747_0 PFAM MgsA AAA ATPase C terminal K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005281 556.0
YHH3_k127_4203747_1 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 542.0
YHH3_k127_4203747_10 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.00000000000000000000000000000000000000000000000000000007896 200.0
YHH3_k127_4203747_11 R3H domain protein K06346 - - 0.000000000000000000000000000000006041 131.0
YHH3_k127_4203747_12 Protein of unknown function (DUF1285) K09986 - - 0.000000000000000000000324 103.0
YHH3_k127_4203747_2 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007337 524.0
YHH3_k127_4203747_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 478.0
YHH3_k127_4203747_4 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003489 418.0
YHH3_k127_4203747_5 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008238 417.0
YHH3_k127_4203747_6 SurA N-terminal domain K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 369.0
YHH3_k127_4203747_7 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 355.0
YHH3_k127_4203747_8 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 329.0
YHH3_k127_4203747_9 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000001538 207.0
YHH3_k127_4208794_0 transferase activity, transferring glycosyl groups K13693 - 2.4.1.266 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 546.0
YHH3_k127_4208794_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005523 397.0
YHH3_k127_4208794_2 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 391.0
YHH3_k127_4208794_3 COG3839 ABC-type sugar transport systems, ATPase components K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005809 316.0
YHH3_k127_4208794_4 Binding-protein-dependent transport system inner membrane component K02026,K10238 - - 0.000000000000000000000000000000000000000000000005594 174.0
YHH3_k127_4242030_0 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 2.905e-247 779.0
YHH3_k127_4242030_1 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 588.0
YHH3_k127_4242030_2 lactate metabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 355.0
YHH3_k127_4242030_3 PFAM Coenzyme F420 hydrogenase dehydrogenase beta subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000181 273.0
YHH3_k127_4242030_4 PFAM methyl-viologen-reducing hydrogenase delta subunit K14127 - 1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000008463 207.0
YHH3_k127_4242030_5 Belongs to the UbiD family K03182,K16874 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000004666 201.0
YHH3_k127_4242030_6 4fe-4S ferredoxin, iron-sulfur binding domain protein K19516 - - 0.000000000000000000000000000000002148 134.0
YHH3_k127_4242030_7 4Fe-4S dicluster domain - - - 0.0000000000000000007831 91.0
YHH3_k127_4242030_8 FAD linked oxidase domain protein - - - 0.000003363 50.0
YHH3_k127_4248684_0 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006795 265.0
YHH3_k127_4248684_1 Domain of unknown function(DUF2779) - - - 0.000000000000000000000000000000000000000000000000000000000000000001532 237.0
YHH3_k127_4248684_2 PFAM Membrane protein of K08972 - - 0.00000000000000000000000000001003 121.0
YHH3_k127_4248684_3 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000001414 113.0
YHH3_k127_4248684_4 'Cold-shock' DNA-binding domain - - - 0.0000000000000000000000002525 109.0
YHH3_k127_4248684_5 NADPH-dependent FMN reductase - - - 0.0000000000000000000004792 108.0
YHH3_k127_4248684_6 B12 binding domain - - - 0.00000000000000000000948 106.0
YHH3_k127_4259230_0 formate dehydrogenase (NAD+) activity K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000005217 209.0
YHH3_k127_4259230_1 SurA N-terminal domain K03769 - 5.2.1.8 0.0000000000000000000000000000000145 140.0
YHH3_k127_4259230_2 Rubrerythrin - - - 0.0000003267 55.0
YHH3_k127_4259230_3 SMART Elongator protein 3 MiaB NifB - - - 0.0006341 44.0
YHH3_k127_4269178_0 TIGRFAM methylmalonyl-CoA mutase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 549.0
YHH3_k127_4269178_1 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 334.0
YHH3_k127_4269178_2 ADP-glyceromanno-heptose 6-epimerase activity K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 293.0
YHH3_k127_4269178_3 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000002358 169.0
YHH3_k127_4269178_4 D-alanine [D-alanyl carrier protein] ligase activity - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000004775 68.0
YHH3_k127_4333983_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 3.886e-290 897.0
YHH3_k127_4333983_1 Filamentation induced by cAMP protein fic - - - 6.135e-263 817.0
YHH3_k127_4333983_10 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000223 166.0
YHH3_k127_4333983_11 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01534 - 3.6.3.3,3.6.3.5 0.000000000000000000000000000000000000000007505 160.0
YHH3_k127_4333983_12 HicB family - - - 0.0000000000000000000000000000000000236 138.0
YHH3_k127_4333983_13 beta-1,4-mannooligosaccharide phosphorylase - - - 0.000000000000000000000000001094 115.0
YHH3_k127_4333983_14 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000000000000000001214 92.0
YHH3_k127_4333983_15 Transcriptional regulator, AbiEi antitoxin N-terminal domain - - - 0.0000000000000000000176 93.0
YHH3_k127_4333983_16 4 iron, 4 sulfur cluster binding K00176,K00180,K05524 - 1.2.7.3,1.2.7.8 0.000000000000001059 79.0
YHH3_k127_4333983_2 Uncharacterised protein family UPF0052 - - - 4.644e-262 826.0
YHH3_k127_4333983_3 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 1.568e-233 728.0
YHH3_k127_4333983_4 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K00972 - 2.7.7.23,2.7.7.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 533.0
YHH3_k127_4333983_5 Glucosamine-6-phosphate deaminase K02564 - 3.5.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008954 514.0
YHH3_k127_4333983_6 PFAM ADP-ribosylation Crystallin J1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004629 355.0
YHH3_k127_4333983_7 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.0000000000000000000000000000000000000000000000000000007237 197.0
YHH3_k127_4333983_8 - - - - 0.0000000000000000000000000000000000000000000000002053 184.0
YHH3_k127_4333983_9 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000001187 183.0
YHH3_k127_4405509_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 486.0
YHH3_k127_4405509_1 probably responsible for the translocation of the substrate across the membrane K02037,K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 439.0
YHH3_k127_4405509_10 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003421 290.0
YHH3_k127_4405509_11 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000007637 167.0
YHH3_k127_4405509_12 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000148 164.0
YHH3_k127_4405509_13 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000006983 142.0
YHH3_k127_4405509_14 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000002068 139.0
YHH3_k127_4405509_15 mRNA binding - - - 0.0000000000000000000000000000006281 122.0
YHH3_k127_4405509_16 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0000000000000000000000003907 106.0
YHH3_k127_4405509_17 NADPH-dependent FMN reductase - - - 0.00000000000000000000008715 110.0
YHH3_k127_4405509_18 Haemolytic - - - 0.000000000000000000000284 102.0
YHH3_k127_4405509_19 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000001444 77.0
YHH3_k127_4405509_2 Binding-protein-dependent transport system inner membrane component K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 394.0
YHH3_k127_4405509_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006852 384.0
YHH3_k127_4405509_4 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 361.0
YHH3_k127_4405509_5 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 356.0
YHH3_k127_4405509_6 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 319.0
YHH3_k127_4405509_7 PhoU domain K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 302.0
YHH3_k127_4405509_8 PFAM PP-loop domain protein K06864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 294.0
YHH3_k127_4405509_9 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 301.0
YHH3_k127_4475934_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 448.0
YHH3_k127_4475934_1 Protein of unknown function (DUF1329) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 422.0
YHH3_k127_4475934_2 Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids K16306 - 2.2.1.10,4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005312 372.0
YHH3_k127_4475934_3 Transketolase, pyrimidine binding domain K21417 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 317.0
YHH3_k127_4475934_4 (E1) component, eukaryotic type, alpha subunit K21416 - - 0.00000000000000000000000000000000000000000000000000000000000000001206 236.0
YHH3_k127_4475934_5 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000111 215.0
YHH3_k127_4475934_6 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000366 191.0
YHH3_k127_4475934_7 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000002163 152.0
YHH3_k127_4475934_8 Exporters of the RND superfamily K07003 - - 0.0000000000003683 70.0
YHH3_k127_4475934_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K05606 - 5.1.99.1 0.0001459 51.0
YHH3_k127_4491478_0 SMART Elongator protein 3 MiaB NifB K04034 - 1.21.98.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009028 538.0
YHH3_k127_4491478_1 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009998 327.0
YHH3_k127_4491478_10 ResB-like family K07399 - - 0.0000001156 64.0
YHH3_k127_4491478_11 Ethanolamine utilisation EutQ family protein K04030 - - 0.000001012 55.0
YHH3_k127_4491478_12 Male sterility protein - - - 0.000267 45.0
YHH3_k127_4491478_2 Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000743 316.0
YHH3_k127_4491478_3 PFAM peptidase S11, D-alanyl-D-alanine carboxypeptidase K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000006436 224.0
YHH3_k127_4491478_4 NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000004868 205.0
YHH3_k127_4491478_5 PFAM cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000008486 199.0
YHH3_k127_4491478_6 Thioredoxin - - - 0.0000000000000000000000000000000000002118 156.0
YHH3_k127_4491478_7 Papain family cysteine protease - - - 0.0000000000000000000000000000003235 140.0
YHH3_k127_4491478_8 Transposase - - - 0.0000000000000000000000000006318 115.0
YHH3_k127_4491478_9 Transposase IS200 like - - - 0.000000000000000000000000116 110.0
YHH3_k127_4638866_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.0 1260.0
YHH3_k127_4638866_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004055 376.0
YHH3_k127_4638866_10 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000002156 126.0
YHH3_k127_4638866_11 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00395 - 1.8.99.2 0.0000000000000000000000000189 116.0
YHH3_k127_4638866_12 - - - - 0.0000000000000000000000001272 107.0
YHH3_k127_4638866_13 light absorption - - - 0.000000000000000002628 90.0
YHH3_k127_4638866_14 NADPH-dependent FMN reductase - - - 0.000000000000001725 85.0
YHH3_k127_4638866_15 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000001425 70.0
YHH3_k127_4638866_16 Uncharacterised ArCR, COG2043 - - - 0.0000001443 61.0
YHH3_k127_4638866_17 LTXXQ motif family protein - - - 0.000004138 55.0
YHH3_k127_4638866_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 365.0
YHH3_k127_4638866_3 PFAM Outer membrane efflux protein K15725 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004974 349.0
YHH3_k127_4638866_4 PFAM Glutamine cyclotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 302.0
YHH3_k127_4638866_5 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002026 288.0
YHH3_k127_4638866_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002978 290.0
YHH3_k127_4638866_7 PFAM binding-protein-dependent transport systems inner membrane component K02050,K15552 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008263 279.0
YHH3_k127_4638866_8 ABC transporter K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005496 274.0
YHH3_k127_4638866_9 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) K02626 - 4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003489 267.0
YHH3_k127_4694045_0 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 443.0
YHH3_k127_4694045_1 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006138 393.0
YHH3_k127_4694045_10 O-methyltransferase - - - 0.000000000000000000000000000000000000000000002406 179.0
YHH3_k127_4694045_11 cobinamide kinase activity K02231,K02232 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008819,GO:0008820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0033554,GO:0044237,GO:0050896,GO:0051716,GO:0070568 2.7.1.156,2.7.7.62,6.3.5.10 0.000000000000000000000000000000000000000001231 164.0
YHH3_k127_4694045_12 4fe-4S ferredoxin, iron-sulfur binding domain protein K00441,K00528,K03522,K03616 - 1.12.98.1,1.18.1.2,1.19.1.1 0.000000000000000000000003292 117.0
YHH3_k127_4694045_13 peroxiredoxin activity - - - 0.000000000000000000001787 102.0
YHH3_k127_4694045_14 deoxyhypusine monooxygenase activity K01256 - 3.4.11.2 0.000000000000000000009683 100.0
YHH3_k127_4694045_15 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.000000000000001682 77.0
YHH3_k127_4694045_16 DNA binding domain, excisionase family - - - 0.00000000000234 69.0
YHH3_k127_4694045_17 Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family K10352,K17751 GO:0000003,GO:0001667,GO:0002064,GO:0002065,GO:0002066,GO:0003006,GO:0003008,GO:0003012,GO:0003674,GO:0003774,GO:0003824,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005700,GO:0005703,GO:0005737,GO:0005856,GO:0005859,GO:0005863,GO:0006928,GO:0006936,GO:0006996,GO:0007010,GO:0007015,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0007517,GO:0007525,GO:0007527,GO:0007610,GO:0007626,GO:0008150,GO:0008307,GO:0009653,GO:0009888,GO:0009987,GO:0010631,GO:0010927,GO:0014866,GO:0015629,GO:0016043,GO:0016459,GO:0016460,GO:0016462,GO:0016477,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0030016,GO:0030017,GO:0030029,GO:0030036,GO:0030154,GO:0030239,GO:0030241,GO:0030707,GO:0030855,GO:0030898,GO:0031032,GO:0031033,GO:0031034,GO:0031647,GO:0031672,GO:0032501,GO:0032502,GO:0032504,GO:0032956,GO:0032970,GO:0032982,GO:0032989,GO:0032991,GO:0033043,GO:0034622,GO:0036379,GO:0040011,GO:0042623,GO:0042692,GO:0042802,GO:0042803,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043292,GO:0043519,GO:0043520,GO:0043900,GO:0043902,GO:0043933,GO:0044085,GO:0044087,GO:0044422,GO:0044424,GO:0044427,GO:0044430,GO:0044444,GO:0044446,GO:0044449,GO:0044464,GO:0044703,GO:0045214,GO:0046983,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048609,GO:0048646,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050794,GO:0050821,GO:0051128,GO:0051146,GO:0051179,GO:0051239,GO:0051240,GO:0051493,GO:0051674,GO:0051704,GO:0055001,GO:0055002,GO:0060278,GO:0060279,GO:0060361,GO:0060429,GO:0061061,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071688,GO:0071689,GO:0071840,GO:0090130,GO:0090132,GO:0097435,GO:0098687,GO:0099080,GO:0099081,GO:0099512,GO:2000241,GO:2000243 - 0.0000005563 62.0
YHH3_k127_4694045_2 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 369.0
YHH3_k127_4694045_3 aldo keto reductase K05275 - 1.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006959 322.0
YHH3_k127_4694045_4 PFAM Aminotransferase class I and II K04720 - 4.1.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 299.0
YHH3_k127_4694045_5 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000001222 273.0
YHH3_k127_4694045_6 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003036 255.0
YHH3_k127_4694045_7 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.000000000000000000000000000000000000000000000000001219 189.0
YHH3_k127_4694045_8 Cobalamin-5-phosphate synthase K02233 - 2.7.8.26 0.0000000000000000000000000000000000000000000000186 181.0
YHH3_k127_4694045_9 Short-chain dehydrogenase reductase sdr K00059,K03366 - 1.1.1.100,1.1.1.304,1.1.1.76 0.00000000000000000000000000000000000000000000005386 179.0
YHH3_k127_4704578_0 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 325.0
YHH3_k127_4704578_1 Creatinine amidohydrolase K01470 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000336 271.0
YHH3_k127_4704578_2 PHP domain K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000003831 224.0
YHH3_k127_4704578_3 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016787,GO:0017076,GO:0019538,GO:0019904,GO:0022607,GO:0030163,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0051603,GO:0065003,GO:0070003,GO:0070011,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 3.4.25.2 0.0000001956 54.0
YHH3_k127_475728_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1177.0
YHH3_k127_475728_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 4.991e-205 653.0
YHH3_k127_475728_10 Reverse transcriptase-like K03469,K06864 - 3.1.26.4 0.00000000000000000000000000000001408 133.0
YHH3_k127_475728_11 C4-type zinc ribbon domain K07164 - - 0.000000000000000000000000000003562 130.0
YHH3_k127_475728_12 structural constituent of ribosome K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000001296 98.0
YHH3_k127_475728_13 HPr family K11189 - - 0.0000000000000000003428 91.0
YHH3_k127_475728_2 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000542 563.0
YHH3_k127_475728_3 4Fe-4S binding domain K02572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 364.0
YHH3_k127_475728_4 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 367.0
YHH3_k127_475728_5 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000001572 266.0
YHH3_k127_475728_6 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003292 263.0
YHH3_k127_475728_7 Glycerol-3-phosphate acyltransferase K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000004688 187.0
YHH3_k127_475728_8 YacP-like NYN domain K06962 - - 0.0000000000000000000000000000000008969 138.0
YHH3_k127_475728_9 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000368 134.0
YHH3_k127_4860957_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 467.0
YHH3_k127_4860957_1 DNA polymerase alpha chain like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003591 259.0
YHH3_k127_4860957_2 cobalamin binding - - - 0.000000000000000000000000000000000000008263 149.0
YHH3_k127_4860957_3 PFAM VanZ like - - - 0.00000000000001308 78.0
YHH3_k127_4860957_4 D-alanine [D-alanyl carrier protein] ligase activity - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000006712 65.0
YHH3_k127_4860957_5 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.00000008294 59.0
YHH3_k127_4860957_6 - - - - 0.0000002419 61.0
YHH3_k127_4872923_0 Aldehyde dehydrogenase family K15515 - 1.2.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006612 452.0
YHH3_k127_4872923_1 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 348.0
YHH3_k127_4872923_2 Alpha beta hydrolase - - - 0.0000000000000000000000000000000003032 139.0
YHH3_k127_4872923_3 4'-phosphopantetheinyl transferase superfamily - - - 0.000000000000000000000000000000002661 138.0
YHH3_k127_5002123_0 HsdM N-terminal domain - - - 1.009e-231 726.0
YHH3_k127_5002123_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005439 484.0
YHH3_k127_5002123_10 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000008403 228.0
YHH3_k127_5002123_11 Putative heavy-metal chelation K09138 - - 0.000000000000000000000000000000000000000000000000000001795 200.0
YHH3_k127_5002123_12 Uncharacterised protein family UPF0066 - - - 0.00000000000000000000000000000000000000000000000001583 185.0
YHH3_k127_5002123_13 Type I site-specific restriction-modification system, R (Restriction) subunit and related - - - 0.000000000000000000000000000000000000000000778 162.0
YHH3_k127_5002123_14 PIN domain - - - 0.000000000000000000000000000000000000000005619 157.0
YHH3_k127_5002123_15 FeS cluster assembly scaffold protein NifU K04488 - - 0.0000000000000000000000000000000000000167 149.0
YHH3_k127_5002123_16 Transposase IS200 like - - - 0.0000000000000000000000000000001887 128.0
YHH3_k127_5002123_17 PFAM Dinitrogenase iron-molybdenum cofactor - - - 0.000000000000000000000000000001103 125.0
YHH3_k127_5002123_18 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000002817 110.0
YHH3_k127_5002123_19 Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000000000000001263 104.0
YHH3_k127_5002123_2 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 448.0
YHH3_k127_5002123_20 SpoVT / AbrB like domain - - - 0.000000000000000000001561 95.0
YHH3_k127_5002123_21 NADPH-dependent FMN reductase - - - 0.0000000000000000001339 96.0
YHH3_k127_5002123_22 type I site-specific deoxyribonuclease activity K01153 - 3.1.21.3 0.000000000000001662 78.0
YHH3_k127_5002123_23 Protein of unknown function (DUF2283) - - - 0.0000000000001063 71.0
YHH3_k127_5002123_24 Uncharacterised ArCR, COG2043 - - - 0.00000000007224 71.0
YHH3_k127_5002123_26 Pfam:DUF59 - - - 0.0000002631 55.0
YHH3_k127_5002123_27 Putative regulatory protein - - - 0.000000623 55.0
YHH3_k127_5002123_28 pyridoxamine 5'-phosphate K07005 - - 0.000002763 57.0
YHH3_k127_5002123_3 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005015 406.0
YHH3_k127_5002123_4 Exporters of the RND superfamily K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006294 416.0
YHH3_k127_5002123_5 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 353.0
YHH3_k127_5002123_6 Cobyrinic acid ac-diamide synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 349.0
YHH3_k127_5002123_7 PFAM Cobyrinic acid a,c-diamide synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005109 334.0
YHH3_k127_5002123_8 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003236 288.0
YHH3_k127_5002123_9 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007182 276.0
YHH3_k127_5178748_0 Radical SAM N-terminal - - - 2.481e-265 827.0
YHH3_k127_5178748_1 phosphorelay signal transduction system K02481,K07713,K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 422.0
YHH3_k127_5178748_2 Flavin containing amine oxidoreductase K09835 - 5.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000001197 261.0
YHH3_k127_5178748_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000001046 198.0
YHH3_k127_5178748_4 Flavodoxin - - - 0.000000000000000006097 92.0
YHH3_k127_5178748_5 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334,K18330 - 1.12.1.3,1.6.5.3 0.0000000000000001418 83.0
YHH3_k127_5178748_6 Transcriptional regulator, TrmB - - - 0.000000753 58.0
YHH3_k127_5178748_7 Ferredoxin-dependent bilin reductase - - - 0.000955 49.0
YHH3_k127_5192247_0 Oxidoreductase NAD-binding domain K17995 - 1.12.98.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 308.0
YHH3_k127_5192247_1 Biotin-protein ligase, N terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 293.0
YHH3_k127_5192247_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K16950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001101 263.0
YHH3_k127_5206197_0 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 345.0
YHH3_k127_5206197_1 Pilus assembly protein, PilO K02664 - - 0.00000000000000000000000000000000002709 142.0
YHH3_k127_5206197_2 Pilus assembly protein, PilP K02665 - - 0.00000000000000002928 90.0
YHH3_k127_5206197_3 PFAM helix-turn-helix domain protein - - - 0.0000000000000002844 81.0
YHH3_k127_5206197_4 PFAM Fimbrial assembly K02663 - - 0.0000000000001505 78.0
YHH3_k127_5206197_5 Secretin and TonB N terminus short domain K02666 - - 0.0000000000002208 81.0
YHH3_k127_5218261_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.972e-202 643.0
YHH3_k127_5218261_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007769 493.0
YHH3_k127_5218261_10 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains K17830 - 1.3.1.101,1.3.7.11 0.00000000000000004508 94.0
YHH3_k127_5218261_11 - - - - 0.000000000000008505 77.0
YHH3_k127_5218261_12 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000003244 76.0
YHH3_k127_5218261_13 Thioredoxin-like domain - - - 0.0000000000002245 83.0
YHH3_k127_5218261_14 Thioredoxin-like - - - 0.000000005534 68.0
YHH3_k127_5218261_15 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000001061 59.0
YHH3_k127_5218261_2 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000005993 240.0
YHH3_k127_5218261_3 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000007883 235.0
YHH3_k127_5218261_4 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000007435 216.0
YHH3_k127_5218261_5 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000000000000000000000000000000000007285 201.0
YHH3_k127_5218261_6 Transglycosylase SLT domain K08305 - - 0.00000000000000000000000000000000000000000000009404 180.0
YHH3_k127_5218261_7 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000002261 144.0
YHH3_k127_5218261_8 response regulator - - - 0.0000000000000000000000000000000001954 139.0
YHH3_k127_5218261_9 Response regulator receiver domain protein K11527 - 2.7.13.3 0.00000000000000000002445 95.0
YHH3_k127_5235148_0 GMC oxidoreductase K06151,K08261,K19813 - 1.1.5.9,1.1.99.21,1.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000002374 254.0
YHH3_k127_5235148_2 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000001575 91.0
YHH3_k127_5235148_3 Protein of unknown function (DUF1566) - - - 0.000000000006416 76.0
YHH3_k127_5269989_0 Aminopeptidase I zinc metalloprotease (M18) K01267 - 3.4.11.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 542.0
YHH3_k127_5269989_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000003412 213.0
YHH3_k127_5284772_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 3.246e-197 625.0
YHH3_k127_5284772_1 Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP- dependent clade X sub-subfamily K00850 - 2.7.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 592.0
YHH3_k127_5284833_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 3.984e-302 934.0
YHH3_k127_5284833_1 PFAM Carbon starvation protein CstA K06200 - - 1.463e-203 650.0
YHH3_k127_5284833_2 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007799 551.0
YHH3_k127_5284833_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 372.0
YHH3_k127_5284833_4 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008223 373.0
YHH3_k127_5284833_5 4 iron, 4 sulfur cluster binding K18356 - 1.2.1.58 0.0000000000000000000000000000000000000000000000000000000000000001154 228.0
YHH3_k127_5284833_6 Thrombospondin type 3 repeat - - - 0.0000000002103 74.0
YHH3_k127_5284833_7 B12 binding domain - - - 0.0001769 49.0
YHH3_k127_5284833_8 glycosyl transferase, family 39 - - - 0.0003279 53.0
YHH3_k127_5358304_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003548 409.0
YHH3_k127_5358304_1 FMN binding - - - 0.0000000000000000000000000005297 115.0
YHH3_k127_5358304_2 Pyridoxamine 5'-phosphate - - - 0.0000000000000000001659 96.0
YHH3_k127_5453859_0 cobaltochelatase CobN subunit - - - 2.07e-229 757.0
YHH3_k127_5453859_1 Magnesium chelatase, subunit ChlI K03404,K03405 - 6.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 386.0
YHH3_k127_5453859_2 Phage integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 377.0
YHH3_k127_5453859_3 Bacterial regulatory protein, Fis family K02584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 299.0
YHH3_k127_5453859_4 COG0657 Esterase lipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002473 284.0
YHH3_k127_5453859_5 Cytochrome C biogenesis protein transmembrane region K08970 - - 0.0000000000000000000000000000000000000000006552 166.0
YHH3_k127_5453859_6 bacterial (prokaryotic) histone like domain K05788 - - 0.000000000000000000000000003042 115.0
YHH3_k127_5453859_7 Two component, sigma54 specific, transcriptional regulator, Fis family K07712 - - 0.000000000000000000004513 104.0
YHH3_k127_5453859_9 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000002128 67.0
YHH3_k127_5574415_0 FAD dependent oxidoreductase K09879 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 339.0
YHH3_k127_5574415_1 Protein of unknown function (DUF3795) - - - 0.000000000000000000000000116 110.0
YHH3_k127_5574415_2 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00000000000000000006343 99.0
YHH3_k127_5574415_3 Flavin containing amine oxidoreductase K09879 - - 0.000000005406 57.0
YHH3_k127_5636671_0 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007965 397.0
YHH3_k127_5636671_1 lyase activity K01387,K03301 - 3.4.24.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002019 308.0
YHH3_k127_5636671_10 - - - - 0.000001324 58.0
YHH3_k127_5636671_2 PFAM Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002127 253.0
YHH3_k127_5636671_3 COG2414 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0000000000000000000000000000797 122.0
YHH3_k127_5636671_4 PFAM coproporphyrinogen III oxidase K00228 - 1.3.3.3 0.000000000000000002235 94.0
YHH3_k127_5636671_5 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.00000000000003071 78.0
YHH3_k127_5636671_6 Pyridoxamine 5'-phosphate oxidase - - - 0.00000000000005071 79.0
YHH3_k127_5636671_7 Pyridoxamine 5'-phosphate oxidase - - - 0.000000005486 64.0
YHH3_k127_5636671_8 Ferredoxin-dependent bilin reductase K05369 - 1.3.7.2 0.00000005827 63.0
YHH3_k127_5636671_9 Methyltransferase small domain K07461,K15460 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.223 0.0000002775 53.0
YHH3_k127_5655031_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 458.0
YHH3_k127_5655031_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009114 412.0
YHH3_k127_5655031_11 Tetratricopeptide repeat - - - 0.000004217 51.0
YHH3_k127_5655031_2 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000377 366.0
YHH3_k127_5655031_3 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006676 355.0
YHH3_k127_5655031_4 oxidoreductase activity K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009856 355.0
YHH3_k127_5655031_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 298.0
YHH3_k127_5655031_6 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004338 293.0
YHH3_k127_5655031_7 Oxygen tolerance - - - 0.000000000000000000000000001245 123.0
YHH3_k127_5655031_8 Psort location CytoplasmicMembrane, score - - - 0.00000000000000001605 94.0
YHH3_k127_5655031_9 peptidyl-tyrosine sulfation K07114 - - 0.000000000003839 76.0
YHH3_k127_5671659_0 acetyl-CoA hydrolase transferase - - - 8.029e-212 676.0
YHH3_k127_5671659_1 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004448 506.0
YHH3_k127_5671659_10 - - - - 0.000000000000000000000000000000000000000000000000000000000001153 221.0
YHH3_k127_5671659_11 Glycoside hydrolase family 3 K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000004527 196.0
YHH3_k127_5671659_12 4Fe-4S dicluster domain K00171 - 1.2.7.1 0.00000000000000000000000000000000000000001892 154.0
YHH3_k127_5671659_13 serine-type D-Ala-D-Ala carboxypeptidase activity K07259 GO:0000003,GO:0000270,GO:0000910,GO:0003674,GO:0003824,GO:0004175,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006508,GO:0006807,GO:0007049,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009987,GO:0016043,GO:0016787,GO:0016998,GO:0017171,GO:0019538,GO:0019954,GO:0022402,GO:0022414,GO:0022603,GO:0022604,GO:0030203,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0032505,GO:0033218,GO:0033293,GO:0036094,GO:0042597,GO:0043093,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044464,GO:0045229,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051301,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0097159,GO:0140096,GO:1901135,GO:1901136,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901681 3.4.16.4 0.00000000000000000000000000000000000000008344 163.0
YHH3_k127_5671659_14 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000000001244 143.0
YHH3_k127_5671659_15 PFAM Cold-shock protein, DNA-binding K03704 - - 0.000000000000000000000000008056 110.0
YHH3_k127_5671659_16 Pyridoxamine 5'-phosphate oxidase like - - - 0.0000000000001834 76.0
YHH3_k127_5671659_17 Nitrite and sulphite reductase 4Fe-4S - - - 0.0000000000009565 69.0
YHH3_k127_5671659_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 474.0
YHH3_k127_5671659_3 Protein of unknown function (DUF1343) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000659 460.0
YHH3_k127_5671659_4 ferredoxin oxidoreductase beta subunit K00170 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 404.0
YHH3_k127_5671659_5 MltA specific insert domain K08304 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004883 270.0
YHH3_k127_5671659_6 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000003078 251.0
YHH3_k127_5671659_7 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000007603 246.0
YHH3_k127_5671659_8 TIGRFAM 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate family K00172 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000001501 228.0
YHH3_k127_5671659_9 Nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000004355 222.0
YHH3_k127_5690685_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 511.0
YHH3_k127_5690685_1 Putative regulatory protein - - - 0.0000000000000000000002384 100.0
YHH3_k127_5690685_2 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate - - - 0.00000000165 66.0
YHH3_k127_5734079_0 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K03296,K18138 - - 0.0 1545.0
YHH3_k127_5734079_1 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT K18139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 580.0
YHH3_k127_5734079_2 Domain of unknown function (DUF4143) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 407.0
YHH3_k127_5734079_3 Protein of unknown function (DUF3313) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001462 258.0
YHH3_k127_5734079_4 Domain of unknown function (DUF4410) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006367 245.0
YHH3_k127_5734079_5 Ion transport 2 domain protein - - - 0.00000000000000000000000000000000001688 144.0
YHH3_k127_5734079_6 Domain of unknown function (DUF4143) - - - 0.0000000000000000002532 91.0
YHH3_k127_5734079_7 Domain of unknown function (DUF4143) K07133 - - 0.000000000000002375 81.0
YHH3_k127_5734079_8 PFAM SNARE associated Golgi protein - - - 0.000000000002263 76.0
YHH3_k127_5764366_0 Catalyzes the conversion of aminoimidazole ribotide (AIR) to 5-hydroxybenzimidazole (5-HBI) in a radical S-adenosyl-L- methionine (SAM)-dependent reaction. Is thus involved in the anaerobic biosynthesis of the benzimidazole lower axial ligand of the cobamide produced by K22466 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003374 538.0
YHH3_k127_5764366_1 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 520.0
YHH3_k127_5764366_2 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 411.0
YHH3_k127_5764366_3 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000001143 144.0
YHH3_k127_5788201_0 PFAM glycosyl transferase group 1 K13057 - 2.4.1.245 1.684e-197 621.0
YHH3_k127_5788201_1 Bacterial extracellular solute-binding protein K02027,K10236 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 437.0
YHH3_k127_5788201_2 Binding-protein-dependent transport system inner membrane component K02025,K10237 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 334.0
YHH3_k127_5788201_3 Binding-protein-dependent transport system inner membrane component K02026,K10238 - - 0.0000000000000000000000000000000000000000000000000000000008768 208.0
YHH3_k127_5788201_4 transferase activity, transferring glycosyl groups - - - 0.0000000000000000001012 90.0
YHH3_k127_5836048_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 0.0 1224.0
YHH3_k127_5836048_1 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 3.326e-237 758.0
YHH3_k127_5836048_2 Hydrogenase accessory protein HypB K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005527 260.0
YHH3_k127_5836048_3 Hydrogenase formation hypA family K04654 - - 0.00000000000000000000004937 101.0
YHH3_k127_5836048_4 Hydrogenase nickel incorporation protein hypA K04651 - - 0.000000000000000000001003 99.0
YHH3_k127_5836048_5 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000001836 102.0
YHH3_k127_5836048_6 HupF/HypC family K04653 - - 0.00000000000000004548 82.0
YHH3_k127_5891816_0 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 415.0
YHH3_k127_5891816_1 Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 354.0
YHH3_k127_5891816_2 FAD linked oxidase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 329.0
YHH3_k127_5891816_3 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 293.0
YHH3_k127_5891816_4 FAD binding domain K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000008469 196.0
YHH3_k127_5891816_5 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000164 90.0
YHH3_k127_5891816_6 - - - - 0.00004727 54.0
YHH3_k127_5925942_0 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 1.988e-201 641.0
YHH3_k127_5925942_1 Formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 424.0
YHH3_k127_5925942_10 SnoaL-like domain - - - 0.0000000000000000001033 95.0
YHH3_k127_5925942_11 peptidase U32 K08303 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000002043 87.0
YHH3_k127_5925942_12 Biotin-requiring enzyme - - - 0.00000000000000006444 85.0
YHH3_k127_5925942_13 4fe-4S ferredoxin, iron-sulfur binding domain protein K19516 - - 0.0000000000000002521 80.0
YHH3_k127_5925942_14 phosphate K00625,K00634,K19659 - 2.3.1.19,2.3.1.8,4.2.1.119 0.000000000000287 75.0
YHH3_k127_5925942_15 electron transfer protein for hydrogenase K12143 - - 0.000000000001049 75.0
YHH3_k127_5925942_16 PFAM Sporulation - - - 0.00001124 55.0
YHH3_k127_5925942_2 Respiratory-chain NADH dehydrogenase, 30 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005957 417.0
YHH3_k127_5925942_3 COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K21417 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 366.0
YHH3_k127_5925942_4 Dehydrogenase E1 component K00161,K21416 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003047 330.0
YHH3_k127_5925942_5 Carbon-nitrogen hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005427 308.0
YHH3_k127_5925942_6 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 301.0
YHH3_k127_5925942_7 4Fe-4S dicluster domain K00124 - - 0.00000000000000000000000000000000004687 138.0
YHH3_k127_5925942_8 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.0000000000000000000000000000001259 129.0
YHH3_k127_5925942_9 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000000000006947 125.0
YHH3_k127_595948_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 6.182e-243 773.0
YHH3_k127_595948_1 PFAM NADH flavin oxidoreductase NADH oxidase K10797 - 1.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 467.0
YHH3_k127_595948_10 Bacterial regulatory proteins, tetR family - - - 0.0000000000000006002 87.0
YHH3_k127_595948_11 Pyridoxamine 5'-phosphate oxidase - - - 0.00000000007444 70.0
YHH3_k127_595948_12 Belongs to the HY2 family K05369 - 1.3.7.2 0.0000001089 62.0
YHH3_k127_595948_13 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000001707 62.0
YHH3_k127_595948_14 Red chlorophyll catabolite reductase (RCC reductase) - - - 0.00002224 55.0
YHH3_k127_595948_2 PFAM NADH flavin oxidoreductase NADH oxidase K10797 - 1.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 457.0
YHH3_k127_595948_3 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 384.0
YHH3_k127_595948_4 FMN binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 299.0
YHH3_k127_595948_5 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000005267 192.0
YHH3_k127_595948_6 coenzyme F420 binding K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000001385 181.0
YHH3_k127_595948_7 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000000000000000001729 188.0
YHH3_k127_595948_8 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000002136 175.0
YHH3_k127_595948_9 ATP10 protein - - - 0.0000000000000000000000000000000000000001733 157.0
YHH3_k127_6011964_0 TIGRFAM cation diffusion facilitator family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002576 379.0
YHH3_k127_6011964_1 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000001899 114.0
YHH3_k127_6011964_2 - - - - 0.000000000003094 79.0
YHH3_k127_6011964_3 of the RND superfamily K07003 - - 0.0002045 45.0
YHH3_k127_6054205_0 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335,K00355,K18331 - 1.12.1.3,1.6.5.2,1.6.5.3 9.996e-287 890.0
YHH3_k127_6054205_1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 4.974e-235 743.0
YHH3_k127_6054205_10 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007234 327.0
YHH3_k127_6054205_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000003384 250.0
YHH3_k127_6054205_12 PHP-associated K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000004029 234.0
YHH3_k127_6054205_13 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.0000000000000000000000000000000000000000000000000000000000000001203 228.0
YHH3_k127_6054205_14 CarD-like/TRCF domain K07736 - - 0.00000000000000000000000000000000000000000000000000000000000005244 216.0
YHH3_k127_6054205_15 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000003772 209.0
YHH3_k127_6054205_16 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000008172 192.0
YHH3_k127_6054205_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000003489 182.0
YHH3_k127_6054205_18 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.000000000000000000000000000000000000000000000003571 177.0
YHH3_k127_6054205_19 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334,K18330,K22340 - 1.12.1.3,1.17.1.11,1.6.5.3 0.0000000000000000000000000000000000000000000002947 171.0
YHH3_k127_6054205_2 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 2.876e-219 691.0
YHH3_k127_6054205_20 Domain in cystathionine beta-synthase and other proteins. K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000005619 168.0
YHH3_k127_6054205_21 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000000000003987 159.0
YHH3_k127_6054205_22 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000000000000000000000003074 157.0
YHH3_k127_6054205_23 Ferredoxin K17992 - 1.12.1.3 0.0000000000000000000000000000000000000003406 152.0
YHH3_k127_6054205_24 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000000000002585 144.0
YHH3_k127_6054205_25 Domain of unknown function (DUF3786) - - - 0.0000000000000000000000000000000000006483 149.0
YHH3_k127_6054205_26 PFAM DRTGG domain - - - 0.00000000000000000000000000000008316 128.0
YHH3_k127_6054205_27 DRTGG domain - - - 0.0000000000000000000000000000004651 125.0
YHH3_k127_6054205_28 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000006847 111.0
YHH3_k127_6054205_29 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000001661 75.0
YHH3_k127_6054205_3 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 1.857e-218 706.0
YHH3_k127_6054205_4 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 2.888e-206 651.0
YHH3_k127_6054205_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008292 532.0
YHH3_k127_6054205_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 499.0
YHH3_k127_6054205_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045 409.0
YHH3_k127_6054205_8 Fe-S cluster domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 380.0
YHH3_k127_6054205_9 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain K00528,K16951 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 345.0
YHH3_k127_6080259_0 aminotransferase, class I and II K11358 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 470.0
YHH3_k127_6080259_1 Catalyzes the conversion of dihydroorotate to orotate with NAD( ) as electron acceptor K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.00000000000000000000000000000000000000000000000009412 180.0
YHH3_k127_6080259_2 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.000002012 61.0
YHH3_k127_6091050_0 belongs to the CobB CobQ family K06873 - - 0.0000000000000000000000001474 115.0
YHH3_k127_6091050_1 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 0.0000000000000000000000222 105.0
YHH3_k127_6091050_2 Transcriptional regulator - - - 0.000000002212 66.0
YHH3_k127_6099101_0 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 458.0
YHH3_k127_6099101_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006858 397.0
YHH3_k127_6099101_2 PFAM Methylene-tetrahydrofolate reductase C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 287.0
YHH3_k127_6099101_3 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000001043 194.0
YHH3_k127_6099101_4 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000002166 149.0
YHH3_k127_6099101_5 PFAM OsmC family protein - - - 0.000000000000000000000000000000000000002545 156.0
YHH3_k127_6099101_6 PFAM Cyclic nucleotide-binding domain - - - 0.0000000000000000009716 94.0
YHH3_k127_6099101_7 aspartate kinase activity - - - 0.00002216 53.0
YHH3_k127_6099101_8 aspartate kinase activity - - - 0.0001954 50.0
YHH3_k127_6132181_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007243 410.0
YHH3_k127_6132181_1 Subtilase family K13274,K14645 - - 0.00000000000000000000000000000000000000000000000000000000003218 224.0
YHH3_k127_6176631_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 451.0
YHH3_k127_6176631_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 351.0
YHH3_k127_6176631_2 membrane K08978 - - 0.000000000000000000000000002159 116.0
YHH3_k127_6176631_3 Yqey-like protein K09117 - - 0.00000000000000000000009577 103.0
YHH3_k127_6240454_0 Formate/nitrite transporter K06212 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 325.0
YHH3_k127_6240454_1 FAD binding domain - - - 0.00000000000000000000000000000000000000000000004668 186.0
YHH3_k127_6240454_2 Glycine-zipper domain - - - 0.000000000000000000000000004718 115.0
YHH3_k127_6240454_3 Thioredoxin - - - 0.00000000000000000000000008615 111.0
YHH3_k127_6240454_4 Matrix metalloproteinase 14a (membrane-inserted) K07763,K07995,K07996,K07997,K08002,K08003 GO:0000003,GO:0000902,GO:0000904,GO:0001501,GO:0001503,GO:0001525,GO:0001541,GO:0001558,GO:0001568,GO:0001666,GO:0001704,GO:0001706,GO:0001763,GO:0001838,GO:0001935,GO:0001944,GO:0001952,GO:0001953,GO:0001958,GO:0002009,GO:0002165,GO:0002218,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0002694,GO:0002696,GO:0003006,GO:0003007,GO:0003143,GO:0003144,GO:0003313,GO:0003314,GO:0003315,GO:0003318,GO:0003319,GO:0003674,GO:0003824,GO:0004175,GO:0004177,GO:0004222,GO:0004252,GO:0005102,GO:0005178,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005794,GO:0005796,GO:0005829,GO:0005856,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006928,GO:0006929,GO:0006935,GO:0006950,GO:0006979,GO:0007154,GO:0007162,GO:0007267,GO:0007275,GO:0007276,GO:0007292,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007413,GO:0007417,GO:0007419,GO:0007424,GO:0007426,GO:0007444,GO:0007492,GO:0007503,GO:0007505,GO:0007507,GO:0007548,GO:0007552,GO:0007560,GO:0007561,GO:0008037,GO:0008038,GO:0008045,GO:0008047,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008236,GO:0008237,GO:0008238,GO:0008270,GO:0008283,GO:0008285,GO:0008347,GO:0008406,GO:0008584,GO:0008585,GO:0008593,GO:0009056,GO:0009605,GO:0009611,GO:0009612,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009791,GO:0009792,GO:0009886,GO:0009887,GO:0009888,GO:0009893,GO:0009897,GO:0009966,GO:0009968,GO:0009986,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0010646,GO:0010648,GO:0010810,GO:0010812,GO:0010830,GO:0010831,GO:0010952,GO:0010954,GO:0012505,GO:0014070,GO:0016020,GO:0016021,GO:0016043,GO:0016331,GO:0016477,GO:0016485,GO:0016504,GO:0016787,GO:0017171,GO:0019222,GO:0019538,GO:0019953,GO:0022008,GO:0022411,GO:0022414,GO:0022617,GO:0023051,GO:0023052,GO:0023057,GO:0030030,GO:0030111,GO:0030154,GO:0030155,GO:0030162,GO:0030178,GO:0030182,GO:0030198,GO:0030234,GO:0030307,GO:0030323,GO:0030324,GO:0030334,GO:0030335,GO:0030425,GO:0030574,GO:0030728,GO:0031175,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031347,GO:0031349,GO:0031410,GO:0031638,GO:0031974,GO:0031982,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032963,GO:0032989,GO:0032990,GO:0034330,GO:0034769,GO:0035050,GO:0035148,GO:0035202,GO:0035239,GO:0035295,GO:0035987,GO:0035988,GO:0036075,GO:0036293,GO:0036477,GO:0040008,GO:0040011,GO:0040012,GO:0040017,GO:0040036,GO:0040037,GO:0042060,GO:0042063,GO:0042127,GO:0042221,GO:0042330,GO:0042470,GO:0042995,GO:0043005,GO:0043009,GO:0043062,GO:0043085,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043615,GO:0043627,GO:0044087,GO:0044093,GO:0044238,GO:0044352,GO:0044354,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044877,GO:0045088,GO:0045089,GO:0045111,GO:0045137,GO:0045165,GO:0045168,GO:0045216,GO:0045577,GO:0045579,GO:0045595,GO:0045597,GO:0045619,GO:0045621,GO:0045746,GO:0045862,GO:0045927,GO:0046331,GO:0046528,GO:0046529,GO:0046545,GO:0046546,GO:0046660,GO:0046661,GO:0046872,GO:0046914,GO:0048468,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048562,GO:0048563,GO:0048568,GO:0048569,GO:0048583,GO:0048584,GO:0048585,GO:0048598,GO:0048608,GO:0048609,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048701,GO:0048704,GO:0048705,GO:0048706,GO:0048707,GO:0048729,GO:0048731,GO:0048754,GO:0048770,GO:0048771,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050673,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050839,GO:0050864,GO:0050865,GO:0050867,GO:0050871,GO:0050896,GO:0051094,GO:0051128,GO:0051129,GO:0051147,GO:0051149,GO:0051153,GO:0051155,GO:0051171,GO:0051173,GO:0051179,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051249,GO:0051251,GO:0051270,GO:0051272,GO:0051336,GO:0051345,GO:0051604,GO:0051674,GO:0051704,GO:0051893,GO:0051895,GO:0052547,GO:0060255,GO:0060322,GO:0060348,GO:0060349,GO:0060350,GO:0060429,GO:0060541,GO:0060562,GO:0060612,GO:0060828,GO:0060973,GO:0061134,GO:0061138,GO:0061448,GO:0061458,GO:0061564,GO:0065007,GO:0065009,GO:0070006,GO:0070011,GO:0070013,GO:0070482,GO:0070613,GO:0071704,GO:0071711,GO:0071840,GO:0071944,GO:0072091,GO:0072175,GO:0072358,GO:0072359,GO:0080090,GO:0080134,GO:0090090,GO:0090109,GO:0090287,GO:0090288,GO:0097094,GO:0097156,GO:0097447,GO:0097458,GO:0097485,GO:0097708,GO:0098552,GO:0098772,GO:0106030,GO:0120025,GO:0120036,GO:0120038,GO:0120039,GO:0140096,GO:1901201,GO:1901202,GO:1901564,GO:1901888,GO:1901889,GO:1902105,GO:1902107,GO:1903053,GO:1903054,GO:1903317,GO:1903319,GO:1903391,GO:1903392,GO:1903706,GO:1903708,GO:1904888,GO:1905521,GO:1905523,GO:1990834,GO:2000026,GO:2000145,GO:2000147,GO:2000647 3.4.24.80 0.00000004412 62.0
YHH3_k127_6240454_5 Subtilase family - - - 0.00004968 51.0
YHH3_k127_6240454_6 DNA-directed DNA polymerase activity - - - 0.00006235 53.0
YHH3_k127_6240454_7 40-residue YVTN family beta-propeller repeat - - - 0.0002773 49.0
YHH3_k127_6246991_0 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 386.0
YHH3_k127_6246991_1 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 383.0
YHH3_k127_6246991_2 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.00000000000000000000000000000000000004194 154.0
YHH3_k127_6246991_3 QacR-like protein, C-terminal region - - - 0.00000000000001148 81.0
YHH3_k127_6404724_0 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 321.0
YHH3_k127_6404724_1 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 313.0
YHH3_k127_6404724_2 regulation of ruffle assembly - - - 0.000000000000000000000000000000000000000000000002943 183.0
YHH3_k127_6404724_3 Lipid A 3-O-deacylase (PagL) - - - 0.000000000000000000000005416 109.0
YHH3_k127_642907_0 Heat shock 70 kDa protein K04043 - - 4.488e-311 963.0
YHH3_k127_642907_1 SMART Elongator protein 3 MiaB NifB - - - 7.584e-252 803.0
YHH3_k127_642907_10 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000006589 151.0
YHH3_k127_642907_11 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000000001094 123.0
YHH3_k127_642907_12 Domain of unknown function (DUF1844) - - - 0.000000000000000000000000000001644 125.0
YHH3_k127_642907_13 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000005997 111.0
YHH3_k127_642907_14 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.000000000000000000000005015 107.0
YHH3_k127_642907_15 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000001161 84.0
YHH3_k127_642907_16 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000725 55.0
YHH3_k127_642907_17 Single-strand binding protein family K03111 - - 0.000004761 53.0
YHH3_k127_642907_2 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008235 599.0
YHH3_k127_642907_3 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006129 580.0
YHH3_k127_642907_4 Belongs to the ClpA ClpB family K03696 GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 504.0
YHH3_k127_642907_5 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 387.0
YHH3_k127_642907_6 SMART Elongator protein 3 MiaB NifB K22227 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004088 332.0
YHH3_k127_642907_7 PFAM Nucleotidyl transferase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 315.0
YHH3_k127_642907_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000005106 218.0
YHH3_k127_642907_9 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000005578 167.0
YHH3_k127_6438498_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 5.816e-259 811.0
YHH3_k127_6438498_1 PFAM Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 344.0
YHH3_k127_6438498_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005778 263.0
YHH3_k127_6438498_3 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000000000000000000000000000000000000000000000000001695 218.0
YHH3_k127_6438498_4 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000006091 220.0
YHH3_k127_6438498_5 queuosine biosynthetic process K03470,K09765 - 1.17.99.6,3.1.26.4 0.000000000000000000000000000000000000000000000000000001145 199.0
YHH3_k127_6438498_6 galactose-1-phosphate uridylyltransferase - - - 0.0000000000000000000000000000000000000000000000001165 189.0
YHH3_k127_6438498_7 synthase (ComA) K08097 - 4.4.1.19 0.0000000000001056 72.0
YHH3_k127_6438498_8 - - - - 0.000000000003184 72.0
YHH3_k127_6441339_0 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004799 286.0
YHH3_k127_6441339_1 4Fe-4S binding domain K02572 - - 0.000000000000000000000000000000000000000000000000000000000002404 218.0
YHH3_k127_6498866_0 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 352.0
YHH3_k127_6498866_1 Glycosyl transferases group 1 K02844 - - 0.00000000000000000000000000000000000000000000000000000000000000000007388 243.0
YHH3_k127_6498866_2 UTP--glucose-1-phosphate uridylyltransferase - - - 0.00000000000000000000000002438 112.0
YHH3_k127_6539296_0 Putative TM nitroreductase - - - 0.0000000000000000000000000000000000000000000003165 173.0
YHH3_k127_6539296_1 AsmA family K07289 - - 0.0000688 55.0
YHH3_k127_6583078_0 Amino acid permease K16238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 311.0
YHH3_k127_6583078_1 Mov34 MPN PAD-1 family K21140 - 3.13.1.6 0.00000000000000000000001288 106.0
YHH3_k127_6779186_0 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 582.0
YHH3_k127_6779186_1 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 493.0
YHH3_k127_6779186_2 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002267 291.0
YHH3_k127_6779186_3 - - - - 0.00000000004592 71.0
YHH3_k127_6784440_0 PFAM CO dehydrogenase acetyl-CoA synthase complex beta subunit K14138 - 2.3.1.169 0.0 1099.0
YHH3_k127_6784440_1 CO dehydrogenase acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007511 557.0
YHH3_k127_6784440_2 Pterin binding enzyme K15023 - 2.1.1.258 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 314.0
YHH3_k127_6784440_3 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.000000000002716 66.0
YHH3_k127_6803222_0 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006235 329.0
YHH3_k127_6803222_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 329.0
YHH3_k127_6803222_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 313.0
YHH3_k127_6803222_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.00000000000000000000000000000000000000000000000000000002274 200.0
YHH3_k127_6803222_4 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000004796 191.0
YHH3_k127_6868241_0 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000000000000000003454 188.0
YHH3_k127_6868241_1 COG2059 Chromate transport protein ChrA K07240 - - 0.0000000000000000000000000000000000000000004151 163.0
YHH3_k127_6868241_2 - - - - 0.00000000000000000000000002926 119.0
YHH3_k127_6868241_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K02574 - - 0.000000000005551 77.0
YHH3_k127_6868241_4 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000002243 65.0
YHH3_k127_6869178_0 metal ion transport K14445 - - 7.619e-196 627.0
YHH3_k127_6869178_1 TIGRFAM adenosine phosphosulphate reductase, alpha subunit K00394 - 1.8.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 561.0
YHH3_k127_6869178_2 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 396.0
YHH3_k127_6869178_3 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00366,K00392 - 1.7.7.1,1.8.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004071 375.0
YHH3_k127_6869178_4 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004951 324.0
YHH3_k127_6869178_5 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00395 - 1.8.99.2 0.0000000000000000000002538 104.0
YHH3_k127_689659_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 376.0
YHH3_k127_689659_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 333.0
YHH3_k127_6911497_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1045.0
YHH3_k127_6911497_1 PFAM cell divisionFtsK SpoIIIE K03466 - - 6.008e-196 636.0
YHH3_k127_6911497_10 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000001873 110.0
YHH3_k127_6911497_11 FAD linked oxidase domain protein - - - 0.00000000000000000000007063 100.0
YHH3_k127_6911497_12 4Fe-4S dicluster domain - - - 0.0000000000000000000008082 98.0
YHH3_k127_6911497_13 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000000001861 77.0
YHH3_k127_6911497_15 Predicted metal-binding protein (DUF2284) - - - 0.0000002177 61.0
YHH3_k127_6911497_16 - - - - 0.000006796 55.0
YHH3_k127_6911497_17 Ribbon-helix-helix protein, copG family - - - 0.0006651 43.0
YHH3_k127_6911497_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 495.0
YHH3_k127_6911497_3 PFAM CoA-transferase family III K18702 - 2.8.3.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003907 481.0
YHH3_k127_6911497_4 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 347.0
YHH3_k127_6911497_5 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 318.0
YHH3_k127_6911497_6 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000005473 188.0
YHH3_k127_6911497_7 FAD binding domain - - - 0.000000000000000000000000000000000000000006806 173.0
YHH3_k127_6911497_8 Toxic component of a toxin-antitoxin (TA) module. An RNase K07065 - - 0.00000000000000000000000000000000000005073 146.0
YHH3_k127_6911497_9 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000001071 121.0
YHH3_k127_6929206_0 Diguanylate cyclase K21084 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000004883 260.0
YHH3_k127_6929206_1 PFAM NmrA-like family - - - 0.0000000000000000000000001401 115.0
YHH3_k127_6929206_2 YHS domain K00441 - 1.12.98.1 0.000000000000000000002358 108.0
YHH3_k127_6929206_3 Belongs to the HesB IscA family - - - 0.0000000000000001335 81.0
YHH3_k127_6929206_4 endopeptidase activity - - - 0.0000000000005085 82.0
YHH3_k127_6929206_6 NHL repeat - - - 0.0000000003979 73.0
YHH3_k127_6929206_7 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00009504 56.0
YHH3_k127_6929206_8 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00009504 56.0
YHH3_k127_6932610_0 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007703 493.0
YHH3_k127_6932610_1 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 420.0
YHH3_k127_6932610_2 Polysulphide reductase, NrfD - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 422.0
YHH3_k127_6932610_3 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 390.0
YHH3_k127_6932610_4 4Fe-4S dicluster domain K00124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 339.0
YHH3_k127_6932610_5 Methylene-tetrahydrofolate reductase C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 316.0
YHH3_k127_6932610_6 Class III cytochrome C family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 325.0
YHH3_k127_6932610_7 nitrate reductase activity - - - 0.00000000000000000000000000000000000000000000001402 177.0
YHH3_k127_6932610_8 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000001113 161.0
YHH3_k127_694590_0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K00134 - 1.2.1.12 3.281e-198 621.0
YHH3_k127_694590_1 PFAM Citrate transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 559.0
YHH3_k127_694590_2 AAA domain K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 548.0
YHH3_k127_694590_3 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003946 532.0
YHH3_k127_694590_4 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 382.0
YHH3_k127_694590_5 Bacterial periplasmic substrate-binding proteins K09969 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 316.0
YHH3_k127_694590_6 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.0000000000000000000000000000000003487 132.0
YHH3_k127_694826_0 Sensor histidine kinase PilS, PAS domain-containing K02668,K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007916 355.0
YHH3_k127_694826_1 response regulator K02667 - - 0.000000003151 59.0
YHH3_k127_694826_2 Tetratricopeptide repeat - - - 0.0001022 49.0
YHH3_k127_6993510_0 Dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 366.0
YHH3_k127_6993510_1 COG1194 A G-specific DNA glycosylase K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 323.0
YHH3_k127_6993510_2 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000007211 243.0
YHH3_k127_6993510_3 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 0.000000000000000000000000000267 125.0
YHH3_k127_703517_0 TIGRFAM Hopanoid biosynthesis associated RND transporter like protein HpnN K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 295.0
YHH3_k127_703517_1 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000005307 233.0
YHH3_k127_7053313_0 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.0000000000000000000000000000000000000000000000000000000000000516 223.0
YHH3_k127_7053313_1 OmpA family - - - 0.000000000000000000000000000000000000000000000000002424 186.0
YHH3_k127_7053313_2 Belongs to the LOG family K06966 - 3.2.2.10 0.000000002297 63.0
YHH3_k127_7083183_0 methionyl-tRNA aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 613.0
YHH3_k127_7083183_1 ArgK protein K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009283 323.0
YHH3_k127_7083183_10 methylmalonyl-CoA mutase C-terminal K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000005321 196.0
YHH3_k127_7083183_11 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000178 171.0
YHH3_k127_7083183_12 Bacterial antitoxin of type II TA system, VapB - - - 0.0000000000000000004283 88.0
YHH3_k127_7083183_13 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01450,K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.31,3.5.1.88 0.0002839 44.0
YHH3_k127_7083183_2 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 297.0
YHH3_k127_7083183_3 PFAM PSP1 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000081 240.0
YHH3_k127_7083183_4 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000007434 226.0
YHH3_k127_7083183_5 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000003928 219.0
YHH3_k127_7083183_6 PFAM Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000002289 214.0
YHH3_k127_7083183_7 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000003761 213.0
YHH3_k127_7083183_8 Glyoxalase-like domain K01759,K05606 - 4.4.1.5,5.1.99.1 0.000000000000000000000000000000000000000000000000000000004667 203.0
YHH3_k127_7083183_9 TIGRFAM DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000002891 207.0
YHH3_k127_7111846_0 Pyridine nucleotide-disulphide oxidoreductase K00335 - 1.6.5.3 6.2e-322 1014.0
YHH3_k127_7111846_1 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 1.71e-207 667.0
YHH3_k127_7111846_10 methyltransferase - - - 0.000000000000000000000000000000000000002818 153.0
YHH3_k127_7111846_11 PFAM 4Fe-4S binding domain - - - 0.000000000000000000000000000000001445 135.0
YHH3_k127_7111846_12 ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000000000006374 108.0
YHH3_k127_7111846_13 - - - - 0.00000000000002883 79.0
YHH3_k127_7111846_14 - - - - 0.000002293 52.0
YHH3_k127_7111846_15 Molybdopterin converting factor, small subunit K03636 - - 0.00006543 49.0
YHH3_k127_7111846_16 von Willebrand factor, type A K07114 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0009895 53.0
YHH3_k127_7111846_2 Belongs to the selenophosphate synthase 1 family. Class I subfamily K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 458.0
YHH3_k127_7111846_3 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000985 464.0
YHH3_k127_7111846_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 312.0
YHH3_k127_7111846_5 Selenium-dependent molybdenum hydroxylase system protein, YqeB family K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 293.0
YHH3_k127_7111846_6 Involved in molybdopterin and thiamine biosynthesis, family 2 K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000001698 268.0
YHH3_k127_7111846_7 XdhC and CoxI family K07402 - - 0.000000000000000000000000000000000000000000000000000000000003164 217.0
YHH3_k127_7111846_8 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334,K18330,K22340 - 1.12.1.3,1.17.1.11,1.6.5.3 0.0000000000000000000000000000000000000000000832 164.0
YHH3_k127_7111846_9 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K05796 - - 0.000000000000000000000000000000000000000001545 162.0
YHH3_k127_7129660_0 Uracil-DNA glycosylase, family 4 K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000001015 181.0
YHH3_k127_7129660_1 Radical SAM - - - 0.00000000000000000000000000006835 122.0
YHH3_k127_7142280_0 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000002559 213.0
YHH3_k127_7142280_1 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000002758 63.0
YHH3_k127_7142280_2 Major facilitator superfamily - - - 0.000000008673 68.0
YHH3_k127_7158937_0 Ion channel - - - 1.354e-223 706.0
YHH3_k127_7158937_1 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 439.0
YHH3_k127_7158937_10 Sulfatase - - - 0.00000000000000000000000000000000000000000006986 178.0
YHH3_k127_7158937_11 Sulfopyruvate decarboxylase K06034 GO:0003674,GO:0003824,GO:0006082,GO:0006732,GO:0006790,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0019295,GO:0019296,GO:0044237,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0050545,GO:0051186,GO:0051188,GO:0071704,GO:1901576 4.1.1.79 0.00000000000000000000000000000000000008605 147.0
YHH3_k127_7158937_12 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.0000000000000000000000001313 108.0
YHH3_k127_7158937_13 Belongs to the ComB family K05979 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 3.1.3.71 0.00000000000000000000001256 109.0
YHH3_k127_7158937_14 Mov34 MPN PAD-1 family K21140 - 3.13.1.6 0.00000000000000000000005303 103.0
YHH3_k127_7158937_15 cellulose binding - - - 0.00000000000000000001613 107.0
YHH3_k127_7158937_2 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009335 403.0
YHH3_k127_7158937_3 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 377.0
YHH3_k127_7158937_4 synthase (ComA) K08097 - 4.4.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000002883 246.0
YHH3_k127_7158937_5 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000493 242.0
YHH3_k127_7158937_6 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000001404 200.0
YHH3_k127_7158937_7 Protein of unknown function (DUF1566) - - - 0.000000000000000000000000000000000000000000000000009138 199.0
YHH3_k127_7158937_8 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K13039 - 4.1.1.79 0.000000000000000000000000000000000000000000000002821 179.0
YHH3_k127_7158937_9 Sulfatase - - - 0.000000000000000000000000000000000000000000000005022 195.0
YHH3_k127_7241857_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 2.814e-207 677.0
YHH3_k127_7241857_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 596.0
YHH3_k127_7241857_10 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000001779 107.0
YHH3_k127_7241857_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 589.0
YHH3_k127_7241857_3 Type II secretion system (T2SS), protein F K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 473.0
YHH3_k127_7241857_4 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 411.0
YHH3_k127_7241857_5 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 361.0
YHH3_k127_7241857_6 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001333 265.0
YHH3_k127_7241857_7 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000009652 206.0
YHH3_k127_7241857_8 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000000002581 160.0
YHH3_k127_7241857_9 Outer membrane protein (OmpH-like) K06142 - - 0.00000000000000000000000000000001355 133.0
YHH3_k127_7296126_0 Putative modulator of DNA gyrase K03568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 568.0
YHH3_k127_7296126_1 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 556.0
YHH3_k127_7296126_10 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000009869 190.0
YHH3_k127_7296126_11 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000001304 190.0
YHH3_k127_7296126_12 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000006088 142.0
YHH3_k127_7296126_13 Belongs to the Fur family K09825 - - 0.000000000000000000000000000000000001436 143.0
YHH3_k127_7296126_14 superoxide reductase activity K05919 - 1.15.1.2 0.000000000000000000002624 96.0
YHH3_k127_7296126_15 Rubrerythrin - - - 0.0000000000000002059 82.0
YHH3_k127_7296126_16 4Fe-4S binding domain - - - 0.000000000000002662 84.0
YHH3_k127_7296126_17 Rubrerythrin - - - 0.00000000000002684 73.0
YHH3_k127_7296126_18 glutaredoxin-like protein, YruB-family - - - 0.0000000000001138 72.0
YHH3_k127_7296126_2 metallopeptidase activity K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 493.0
YHH3_k127_7296126_21 lysine biosynthesis protein LysW K05826 - - 0.0001291 46.0
YHH3_k127_7296126_22 - - - - 0.0008097 47.0
YHH3_k127_7296126_3 PFAM Flavodoxin K22405 - 1.6.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006826 469.0
YHH3_k127_7296126_4 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 412.0
YHH3_k127_7296126_5 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K13819 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005654 371.0
YHH3_k127_7296126_6 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004645 330.0
YHH3_k127_7296126_7 COG1045 Serine acetyltransferase K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 311.0
YHH3_k127_7296126_8 Rubredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005044 302.0
YHH3_k127_7296126_9 FtsZ-dependent cytokinesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004521 257.0
YHH3_k127_7317994_0 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 539.0
YHH3_k127_7317994_1 PFAM oxidoreductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008696 459.0
YHH3_k127_7317994_2 Domain of unknown function (DUF4105) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007007 319.0
YHH3_k127_7317994_3 - - - - 0.000000000000000000000000003386 117.0
YHH3_k127_7331638_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1041.0
YHH3_k127_7331638_1 Domain of unknown function (DUF1846) - - - 1.149e-239 749.0
YHH3_k127_7331638_10 regulatory protein, arsR K03892 - - 0.00000000000000000000000003542 113.0
YHH3_k127_7331638_12 - - - - 0.0000000000000000000004796 101.0
YHH3_k127_7331638_13 Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids K16306 - 2.2.1.10,4.1.2.13 0.00000000001409 65.0
YHH3_k127_7331638_2 PFAM Bile acid sodium symporter K03325 - - 8.658e-209 654.0
YHH3_k127_7331638_3 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003943 503.0
YHH3_k127_7331638_4 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 421.0
YHH3_k127_7331638_5 Hypothetical methyltransferase K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007824 315.0
YHH3_k127_7331638_6 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K00557,K03215 - 2.1.1.190,2.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006705 316.0
YHH3_k127_7331638_7 COG3264 Small-conductance mechanosensitive channel K22051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009526 278.0
YHH3_k127_7331638_8 SEC-C Motif Domain Protein - - - 0.0000000000000000000000000000000000000000000000000002346 198.0
YHH3_k127_7331638_9 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008794,GO:0016491,GO:0030611,GO:0030613,GO:0030614,GO:0042221,GO:0046685,GO:0050896,GO:0055114 1.20.4.1 0.0000000000000000000000000000000000000000000002008 170.0
YHH3_k127_7377681_0 Hydrogenase formation hypA family K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 419.0
YHH3_k127_7377681_1 hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003513 400.0
YHH3_k127_7377681_2 Hydrogenase assembly chaperone hypC hupF K04653 - - 0.0000000000000002225 80.0
YHH3_k127_7377681_3 HypF finger K04656 - - 0.00000002535 55.0
YHH3_k127_7389959_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 9.843e-209 656.0
YHH3_k127_7389959_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316 452.0
YHH3_k127_7389959_10 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000009288 232.0
YHH3_k127_7389959_11 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000399 219.0
YHH3_k127_7389959_12 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000033 209.0
YHH3_k127_7389959_13 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000007184 207.0
YHH3_k127_7389959_14 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000007586 203.0
YHH3_k127_7389959_15 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000001703 199.0
YHH3_k127_7389959_16 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000001102 181.0
YHH3_k127_7389959_17 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000000006811 175.0
YHH3_k127_7389959_18 PFAM Cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000000000001895 179.0
YHH3_k127_7389959_19 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000002634 173.0
YHH3_k127_7389959_2 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000386 423.0
YHH3_k127_7389959_20 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000000000000000000000000005879 157.0
YHH3_k127_7389959_21 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000007262 158.0
YHH3_k127_7389959_22 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000003851 154.0
YHH3_k127_7389959_23 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000001711 148.0
YHH3_k127_7389959_24 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000721 141.0
YHH3_k127_7389959_25 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000001363 138.0
YHH3_k127_7389959_26 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.000000000000000000000000000000005006 130.0
YHH3_k127_7389959_27 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000001647 112.0
YHH3_k127_7389959_28 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000001035 106.0
YHH3_k127_7389959_29 Belongs to the UPF0109 family K06960 - - 0.000000000000000000000004708 104.0
YHH3_k127_7389959_3 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005117 321.0
YHH3_k127_7389959_30 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000002972 102.0
YHH3_k127_7389959_31 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000003057 72.0
YHH3_k127_7389959_32 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000002313 67.0
YHH3_k127_7389959_33 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000001278 65.0
YHH3_k127_7389959_4 sequence-specific DNA binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006414 324.0
YHH3_k127_7389959_5 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 296.0
YHH3_k127_7389959_6 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007507 288.0
YHH3_k127_7389959_7 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 286.0
YHH3_k127_7389959_8 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002854 283.0
YHH3_k127_7389959_9 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000004368 234.0
YHH3_k127_7403835_0 PFAM UDP-glucose GDP-mannose dehydrogenase K02474,K13015 - 1.1.1.136 1.038e-298 925.0
YHH3_k127_7403835_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 3.934e-263 823.0
YHH3_k127_7403835_10 PFAM NADH ubiquinone oxidoreductase complex I intermediate-associated protein 30 - - - 0.0000000000000000000000000000001146 127.0
YHH3_k127_7403835_11 Domain of unknown function (DUF1330) - - - 0.0000000000000000000002 100.0
YHH3_k127_7403835_12 Cytochrome C oxidase, cbb3-type, subunit III K08906 - - 0.000000000000000000002511 96.0
YHH3_k127_7403835_2 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 5.769e-254 792.0
YHH3_k127_7403835_3 SERine Proteinase INhibitors K13963 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005846 400.0
YHH3_k127_7403835_4 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007321 357.0
YHH3_k127_7403835_5 NLP P60 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003968 295.0
YHH3_k127_7403835_6 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000733 290.0
YHH3_k127_7403835_7 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.0000000000000000000000000000000000000000000000000000000000000000000000008349 255.0
YHH3_k127_7403835_8 Domain of unknown function (DUF4404) - - - 0.00000000000000000000000000000000000149 140.0
YHH3_k127_7403835_9 YbbR-like protein - - - 0.00000000000000000000000000000004396 136.0
YHH3_k127_7415019_0 BadF BadG BcrA BcrD - - - 0.0 1610.0
YHH3_k127_7415019_1 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 368.0
YHH3_k127_7415019_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000001231 108.0
YHH3_k127_7415019_11 Belongs to the 'phage' integrase family - - - 0.00000000000000001126 84.0
YHH3_k127_7415019_12 Domain of unknown function (DUF4384) - - - 0.0000001641 62.0
YHH3_k127_7415019_13 Acetyltransferase (GNAT) domain - - - 0.00001112 54.0
YHH3_k127_7415019_14 - - - - 0.0001857 44.0
YHH3_k127_7415019_2 Phosphomethylpyrimidine kinase K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000296 286.0
YHH3_k127_7415019_3 Orotidine 5'-phosphate decarboxylase / HUMPS family K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000722 253.0
YHH3_k127_7415019_4 Predicted permease YjgP/YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006512 256.0
YHH3_k127_7415019_5 tigr00255 - - - 0.000000000000000000000000000000000000000000000000000000000000001568 228.0
YHH3_k127_7415019_6 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000001077 224.0
YHH3_k127_7415019_7 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000127 192.0
YHH3_k127_7415019_8 Domain of unknown function (DUF4416) - - - 0.0000000000000000000000000000000000000000000000003746 182.0
YHH3_k127_7415019_9 Domain of unknown function (DUF370) K09777 - - 0.000000000000000000000000000007164 120.0
YHH3_k127_7415947_0 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004431 250.0
YHH3_k127_7415947_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000002605 211.0
YHH3_k127_7415947_2 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000004581 109.0
YHH3_k127_7423187_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1498.0
YHH3_k127_7423187_1 PFAM Glycoside hydrolase 15-related - - - 2.225e-307 970.0
YHH3_k127_7423187_2 ABC transporter K02471 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003648 575.0
YHH3_k127_7423187_3 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000004597 105.0
YHH3_k127_7438684_0 Anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.0 1072.0
YHH3_k127_7438684_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 1.997e-304 948.0
YHH3_k127_7438684_10 Serine aminopeptidase, S33 K06889,K07397 - - 0.00000000000000000000000000000000000000000004806 169.0
YHH3_k127_7438684_11 ABC transporter substrate-binding component GldG K01992 - - 0.0000000000000000000000000000000000000005247 168.0
YHH3_k127_7438684_12 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000000006955 146.0
YHH3_k127_7438684_13 HemY protein - - - 0.000000000000000000000000000001143 130.0
YHH3_k127_7438684_15 pilus assembly protein PilW - - - 0.000000000000000000093 98.0
YHH3_k127_7438684_17 Prokaryotic N-terminal methylation motif K02671 - - 0.0000000000005012 75.0
YHH3_k127_7438684_18 Domain of unknown function (DUF4340) - - - 0.000000000002325 78.0
YHH3_k127_7438684_19 protein transport across the cell outer membrane K02246,K08084 - - 0.0000000005644 66.0
YHH3_k127_7438684_2 type II secretion system K02454 - - 8.39e-208 662.0
YHH3_k127_7438684_20 serine threonine protein kinase - - - 0.0001317 54.0
YHH3_k127_7438684_3 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005724 608.0
YHH3_k127_7438684_4 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 569.0
YHH3_k127_7438684_5 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 337.0
YHH3_k127_7438684_6 - K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006243 248.0
YHH3_k127_7438684_7 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000000000009369 214.0
YHH3_k127_7438684_8 Catalyzes the phosphorylation of D-glycero-D-manno- heptose 7-phosphate at the C-1 position to selectively form D- glycero-beta-D-manno-heptose-1,7-bisphosphate K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000007237 190.0
YHH3_k127_7438684_9 Protein of unknown function (DUF975) - - - 0.000000000000000000000000000000000000000000000001755 182.0
YHH3_k127_7483005_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 565.0
YHH3_k127_7529062_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 5.407e-227 713.0
YHH3_k127_7529062_1 Belongs to the ClpX chaperone family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008578 588.0
YHH3_k127_7529062_10 DNA uptake protein and related DNA-binding proteins K02237 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000002572 79.0
YHH3_k127_7529062_2 PFAM aspartate glutamate uridylate kinase K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005988 548.0
YHH3_k127_7529062_3 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 426.0
YHH3_k127_7529062_4 PFAM type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000454 353.0
YHH3_k127_7529062_5 Bacterial regulatory protein, Fis family K02584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009053 355.0
YHH3_k127_7529062_6 DnaJ molecular chaperone homology domain K03686,K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007724 336.0
YHH3_k127_7529062_7 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000000000000000000000009111 151.0
YHH3_k127_7529062_8 amidohydrolase K01686,K07045 - 4.2.1.8 0.00000000000000000000000000007962 127.0
YHH3_k127_7529062_9 Tetratricopeptide repeat-like domain - - - 0.0000000000000000000007802 104.0
YHH3_k127_7539046_0 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007802 514.0
YHH3_k127_7539046_1 helix_turn_helix, cAMP Regulatory protein K01420,K21563 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001368 280.0
YHH3_k127_75815_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 6.3e-322 1004.0
YHH3_k127_75815_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138,K18307 - - 1.041e-299 950.0
YHH3_k127_75815_10 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000006324 217.0
YHH3_k127_75815_11 - - - - 0.0000000000000000000000000000000000000000000000000000168 197.0
YHH3_k127_75815_12 OsmC-like protein K06889,K07397 - - 0.000000000000000000000000000000000000000487 152.0
YHH3_k127_75815_13 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K01179 - 3.2.1.4 0.000000000000000000000000000000000000001062 171.0
YHH3_k127_75815_14 - - - - 0.000000000000000000000000000001438 123.0
YHH3_k127_75815_15 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000003681 98.0
YHH3_k127_75815_16 amino acid activation for nonribosomal peptide biosynthetic process K06045 - 4.2.1.129,5.4.99.17 0.000000000000000000006853 109.0
YHH3_k127_75815_17 - - - - 0.000000000000000001425 88.0
YHH3_k127_75815_18 NADPH-dependent FMN reductase - - - 0.00000000000000001495 91.0
YHH3_k127_75815_19 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.000000000002716 66.0
YHH3_k127_75815_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11745,K11747 - - 6.538e-265 828.0
YHH3_k127_75815_20 Cobyrinic acid ac-diamide synthase - - - 0.00000001584 60.0
YHH3_k127_75815_21 Putative Fe-S cluster - - - 0.00000007661 55.0
YHH3_k127_75815_22 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.0000003333 59.0
YHH3_k127_75815_3 PFAM Transketolase central region K00162,K11381,K21417 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004571 411.0
YHH3_k127_75815_4 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005841 371.0
YHH3_k127_75815_5 Major Facilitator K08153 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004849 334.0
YHH3_k127_75815_6 of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001049 290.0
YHH3_k127_75815_7 Flavodoxin-like fold K00355,K11748 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000349 252.0
YHH3_k127_75815_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000005143 239.0
YHH3_k127_75815_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000009378 215.0
YHH3_k127_7625957_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 595.0
YHH3_k127_7625957_1 TIGRFAM phosphonopyruvate decarboxylase-related protein K15635 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007682 533.0
YHH3_k127_7625957_10 Kazal type serine protease inhibitors - - - 0.00000000001318 78.0
YHH3_k127_7625957_11 - - - - 0.0000000005472 72.0
YHH3_k127_7625957_12 cysteine-type peptidase activity K03791,K08642,K20742,K21471,K21472 - 3.4.14.13 0.000003731 56.0
YHH3_k127_7625957_13 Kelch motif - - - 0.0002183 53.0
YHH3_k127_7625957_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005979 349.0
YHH3_k127_7625957_3 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009237 299.0
YHH3_k127_7625957_4 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000001982 254.0
YHH3_k127_7625957_5 Protein of unknown function (DUF1566) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001184 258.0
YHH3_k127_7625957_6 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000008183 242.0
YHH3_k127_7625957_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000003716 234.0
YHH3_k127_7625957_8 - - - - 0.00000000000000009622 89.0
YHH3_k127_7625957_9 endothelial cell-cell adhesion K04659,K16857 GO:0000902,GO:0001501,GO:0001503,GO:0001932,GO:0001934,GO:0001936,GO:0001938,GO:0001968,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0003416,GO:0003417,GO:0003674,GO:0005102,GO:0005178,GO:0005488,GO:0005509,GO:0005515,GO:0005518,GO:0005539,GO:0005575,GO:0005576,GO:0005604,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005912,GO:0005924,GO:0005927,GO:0006928,GO:0006950,GO:0007155,GO:0007160,GO:0007275,GO:0007399,GO:0007517,GO:0007610,GO:0008150,GO:0008201,GO:0008284,GO:0009653,GO:0009790,GO:0009887,GO:0009888,GO:0009893,GO:0009987,GO:0010562,GO:0010604,GO:0012505,GO:0014812,GO:0016043,GO:0016203,GO:0016477,GO:0016525,GO:0016528,GO:0016529,GO:0019220,GO:0019222,GO:0021700,GO:0022008,GO:0022603,GO:0022607,GO:0022610,GO:0030030,GO:0030054,GO:0030055,GO:0030154,GO:0030182,GO:0030334,GO:0030335,GO:0030855,GO:0031012,GO:0031175,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031589,GO:0031594,GO:0032101,GO:0032103,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032879,GO:0032989,GO:0032990,GO:0032991,GO:0033554,GO:0033555,GO:0033627,GO:0034103,GO:0034976,GO:0035265,GO:0035989,GO:0040007,GO:0040011,GO:0040012,GO:0040017,GO:0042127,GO:0042325,GO:0042327,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043236,GO:0043237,GO:0043931,GO:0043933,GO:0044085,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045202,GO:0045765,GO:0045937,GO:0046872,GO:0048265,GO:0048266,GO:0048468,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048589,GO:0048646,GO:0048666,GO:0048699,GO:0048705,GO:0048731,GO:0048799,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050678,GO:0050679,GO:0050730,GO:0050731,GO:0050789,GO:0050793,GO:0050794,GO:0050839,GO:0050840,GO:0050896,GO:0050920,GO:0050921,GO:0051093,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051216,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051270,GO:0051272,GO:0051451,GO:0051674,GO:0051716,GO:0060231,GO:0060255,GO:0060343,GO:0060346,GO:0060348,GO:0060349,GO:0060350,GO:0060351,GO:0060429,GO:0060538,GO:0061053,GO:0061061,GO:0061383,GO:0061430,GO:0061448,GO:0062023,GO:0065003,GO:0065007,GO:0070161,GO:0070977,GO:0071603,GO:0071622,GO:0071624,GO:0071695,GO:0071840,GO:0080090,GO:0090022,GO:0090023,GO:0090136,GO:0097367,GO:0098609,GO:0098868,GO:0120036,GO:0120039,GO:1901342,GO:1901343,GO:1901681,GO:1902622,GO:1902624,GO:2000026,GO:2000145,GO:2000147,GO:2000181 - 0.000000000000002278 89.0
YHH3_k127_7717463_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.31e-306 957.0
YHH3_k127_7717463_1 PFAM Glycosyl transferase family 2 K03669 - - 5.4e-244 772.0
YHH3_k127_7717463_11 PKD domain K01186,K01197,K05988,K11931,K18197 - 3.2.1.11,3.2.1.18,3.2.1.35,4.2.2.23 0.00000000000000000000003764 116.0
YHH3_k127_7717463_12 Methyltransferase domain - - - 0.0000000000000000001091 93.0
YHH3_k127_7717463_13 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000001038 81.0
YHH3_k127_7717463_14 cellulase activity K18197 - 4.2.2.23 0.00000000000003985 87.0
YHH3_k127_7717463_15 Belongs to the peptidase S8 family - - - 0.000000000000831 78.0
YHH3_k127_7717463_16 - - - - 0.0000001476 60.0
YHH3_k127_7717463_2 periplasmic glucan biosynthesis protein K03670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 531.0
YHH3_k127_7717463_3 TIGRFAM DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 338.0
YHH3_k127_7717463_4 spermidine synthase activity K00797 GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 351.0
YHH3_k127_7717463_5 acid phosphatase activity - - - 0.000000000000000000000000000000000000000004117 175.0
YHH3_k127_7717463_6 PFAM peptidase - - - 0.000000000000000000000000000000000000001119 160.0
YHH3_k127_7717463_7 extracellular structure organization - GO:0003674,GO:0005198,GO:0005575,GO:0005576,GO:0008150,GO:0009987,GO:0010033,GO:0014070,GO:0016043,GO:0030198,GO:0030587,GO:0031012,GO:0031154,GO:0032502,GO:0042221,GO:0043062,GO:0044421,GO:0048856,GO:0050896,GO:0051703,GO:0051704,GO:0071840,GO:0080184,GO:0090702,GO:0099120,GO:1901700,GO:1902168,GO:1905395 - 0.0000000000000000000000000000000000001916 163.0
YHH3_k127_7717463_8 PFAM OmpA MotB domain protein K03640 - - 0.0000000000000000000000000000000000003823 145.0
YHH3_k127_7717463_9 Tetratricopeptide repeat - - - 0.0000000000000000000000000000006311 143.0
YHH3_k127_7723259_0 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 583.0
YHH3_k127_7723259_1 PFAM CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006161 537.0
YHH3_k127_7723259_10 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.000000000000000000000000000000000000000000000000000000004388 204.0
YHH3_k127_7723259_11 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000000000000003002 190.0
YHH3_k127_7723259_12 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000007808 171.0
YHH3_k127_7723259_13 Methyltransferase K08316 - 2.1.1.171 0.000000000000000000000000000000000000000004167 161.0
YHH3_k127_7723259_14 Lipid A biosynthesis K02517 - 2.3.1.241 0.000000000000000000000000000000000000001578 159.0
YHH3_k127_7723259_15 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000000001571 149.0
YHH3_k127_7723259_16 PFAM OmpA MotB domain protein K03640 - - 0.00000000000000000000000000000000000003746 150.0
YHH3_k127_7723259_17 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950,K13940 - 2.7.6.3,4.1.2.25 0.00000000000000000000000000000000000008605 147.0
YHH3_k127_7723259_18 Biopolymer transport protein ExbD/TolR K03560 - - 0.0000000000000000000000000000000000000975 147.0
YHH3_k127_7723259_19 TIGRFAM iron-sulfur cluster binding protein K18979 - 1.17.99.6 0.0000000000000000000000000000000000002155 157.0
YHH3_k127_7723259_2 Aminotransferase class I and II K10206 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 526.0
YHH3_k127_7723259_20 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000002203 137.0
YHH3_k127_7723259_21 AMP-binding enzyme C-terminal domain K02182 - 6.2.1.48 0.000000000000000000000000000000278 128.0
YHH3_k127_7723259_22 PFAM Cyclic nucleotide-binding domain - - - 0.000000000000000000000000000004355 124.0
YHH3_k127_7723259_23 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.00000000000000000000000001252 115.0
YHH3_k127_7723259_24 monooxygenase activity - - - 0.00000000000003127 76.0
YHH3_k127_7723259_25 PFAM Rhodanese domain protein - - - 0.0000000000006293 76.0
YHH3_k127_7723259_26 DoxX - - - 0.00000000003278 70.0
YHH3_k127_7723259_27 TonB C terminal K03832 - - 0.0000000003925 70.0
YHH3_k127_7723259_28 C4-type zinc ribbon domain K07164 - - 0.00000001343 60.0
YHH3_k127_7723259_3 TIGRFAM single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 492.0
YHH3_k127_7723259_4 TolB amino-terminal domain K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 394.0
YHH3_k127_7723259_5 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 308.0
YHH3_k127_7723259_6 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 294.0
YHH3_k127_7723259_7 PFAM MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000007571 237.0
YHH3_k127_7723259_8 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000000000001445 230.0
YHH3_k127_7723259_9 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000003606 233.0
YHH3_k127_7870860_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1240.0
YHH3_k127_7870860_1 AcrB/AcrD/AcrF family K03296,K18138 - - 0.0 1173.0
YHH3_k127_7870860_10 epimerase K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000001703 146.0
YHH3_k127_7870860_11 Lipid A biosynthesis K02517 - 2.3.1.241 0.00000000000000000000000000000000003999 146.0
YHH3_k127_7870860_12 Transcription factor zinc-finger K09981 - - 0.00000000000000000000000000000053 124.0
YHH3_k127_7870860_2 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 1.77e-302 942.0
YHH3_k127_7870860_3 HlyD family secretion protein K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 434.0
YHH3_k127_7870860_4 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 421.0
YHH3_k127_7870860_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 372.0
YHH3_k127_7870860_6 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 351.0
YHH3_k127_7870860_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 319.0
YHH3_k127_7870860_8 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002921 276.0
YHH3_k127_7870860_9 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000000000005665 169.0
YHH3_k127_7882137_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0030312,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0040007,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046907,GO:0048500,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0071944,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1990904 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 529.0
YHH3_k127_7882137_1 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 405.0
YHH3_k127_7882137_2 Alanine dehydrogenase/PNT, N-terminal domain K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612 388.0
YHH3_k127_7882137_3 MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 373.0
YHH3_k127_7882137_4 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000635 284.0
YHH3_k127_7882137_5 Ribosomal protein L11 methyltransferase (PrmA) K15460 - 2.1.1.223 0.0000000000000000000000000000000000000000000000000000000000001992 219.0
YHH3_k127_7882137_6 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000007086 149.0
YHH3_k127_7882137_7 Belongs to the UPF0109 family K06960 - - 0.000000000000000000000000000001196 124.0
YHH3_k127_7882137_8 Ribosomal protein S16 K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000963 106.0
YHH3_k127_7904223_0 SNF2 Helicase protein - - - 0.0 1236.0
YHH3_k127_7904223_1 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 477.0
YHH3_k127_7904223_10 Lipopolysaccharide kinase (Kdo/WaaP) family - - - 0.00000000000000000000000000007237 133.0
YHH3_k127_7904223_11 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000002359 115.0
YHH3_k127_7904223_12 Bacterial SH3 domain homologues K07184 - - 0.0000000006369 67.0
YHH3_k127_7904223_13 Lipopolysaccharide kinase (Kdo/WaaP) family - - - 0.00000001247 68.0
YHH3_k127_7904223_14 - - - - 0.0004662 49.0
YHH3_k127_7904223_2 Virulence protein RhuM family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009891 451.0
YHH3_k127_7904223_3 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 415.0
YHH3_k127_7904223_4 PFAM zinc finger SWIM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 340.0
YHH3_k127_7904223_5 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000005433 242.0
YHH3_k127_7904223_6 Protein of unknown function (DUF3307) - - - 0.000000000000000000000000000000000000000000000000006821 187.0
YHH3_k127_7904223_7 helicase superfamily c-terminal domain K06877 - - 0.00000000000000000000000000000000000000000000005506 175.0
YHH3_k127_7904223_8 nucleotidyltransferase activity K07075 - - 0.000000000000000000000000000000000000006278 147.0
YHH3_k127_7904223_9 Glycosyltransferase Family 4 K02844 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008194,GO:0008610,GO:0008653,GO:0008919,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0046401,GO:0046527,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000001193 150.0
YHH3_k127_7914808_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 399.0
YHH3_k127_7914808_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000001113 223.0
YHH3_k127_7914808_2 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000004101 155.0
YHH3_k127_7914808_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000005932 89.0
YHH3_k127_7914808_4 DSBA-like thioredoxin domain - - - 0.000000000000003023 83.0
YHH3_k127_7914808_5 Uncharacterised ArCR, COG2043 - - - 0.00002698 52.0
YHH3_k127_7915305_0 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007867 456.0
YHH3_k127_7915305_1 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001066 267.0
YHH3_k127_7915305_2 Uncharacterised ArCR, COG2043 - - - 0.000000000000000000000000000000000000000000000000000000000007869 219.0
YHH3_k127_7915305_3 Uncharacterised ArCR, COG2043 - - - 0.000000000000000006397 93.0
YHH3_k127_7915305_4 dihydromethanopterin reductase activity - - - 0.000000000000148 73.0
YHH3_k127_7915305_5 Carboxypeptidase regulatory-like domain - - - 0.0003266 51.0
YHH3_k127_7955542_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.292e-257 803.0
YHH3_k127_7955542_1 SIS domain K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 403.0
YHH3_k127_7955542_10 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000000000000000000000000004539 129.0
YHH3_k127_7955542_11 PTS system fructose IIA component K02793 - 2.7.1.191 0.00000000000000000000000001782 113.0
YHH3_k127_7955542_12 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.0000000000000000000001099 111.0
YHH3_k127_7955542_13 lipopolysaccharide transmembrane transporter activity K09774,K11719 - - 0.00000000000001467 81.0
YHH3_k127_7955542_14 Arginase family K01480 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 3.5.3.11 0.000000003015 58.0
YHH3_k127_7955542_2 PFAM DAHP synthetase I KDSA K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 342.0
YHH3_k127_7955542_3 lipopolysaccharide transport protein B ATP-binding component of ABC superfamily K01990,K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 323.0
YHH3_k127_7955542_4 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 312.0
YHH3_k127_7955542_5 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) K02823 - - 0.0000000000000000000000000000000000000000000000000000000000000001188 231.0
YHH3_k127_7955542_7 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000000000003001 213.0
YHH3_k127_7955542_8 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.0000000000000000000000000000000000000000000003104 172.0
YHH3_k127_7955542_9 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.000000000000000000000000000000000000000001234 163.0
YHH3_k127_7993068_0 Uncharacterized membrane protein (DUF2298) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 597.0
YHH3_k127_7993068_1 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 462.0
YHH3_k127_7993068_2 PFAM Glycosyl transferase family 2 K20534 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007443 344.0
YHH3_k127_7993068_3 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000772 301.0
YHH3_k127_7993068_4 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001116 282.0
YHH3_k127_7993068_5 Uncharacterized membrane protein (DUF2298) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002318 282.0
YHH3_k127_7993068_6 methyltransferase - - - 0.0000000000000000000000000000000003349 143.0
YHH3_k127_8000967_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K19548 - 1.1.1.385 0.0000000000000000000005793 100.0
YHH3_k127_8000967_1 NADPH-dependent FMN reductase - - - 0.0000000000000000000006472 107.0
YHH3_k127_8051182_0 introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX K03404,K03405 - 6.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 521.0
YHH3_k127_8051182_1 Psort location Cytoplasmic, score K06934 - - 0.000000000000000000000000000000000000000000000001462 178.0
YHH3_k127_8051182_2 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000003587 143.0
YHH3_k127_8051182_3 PFAM NADPH-dependent FMN reductase - - - 0.00000000000000000002815 99.0
YHH3_k127_8051182_4 - - - - 0.00000001805 64.0
YHH3_k127_8139866_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 1.594e-198 636.0
YHH3_k127_8139866_1 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit K05568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 531.0
YHH3_k127_8139866_2 Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur K03146 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 353.0
YHH3_k127_8139866_3 - - - - 0.00000003857 64.0
YHH3_k127_8247847_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.848e-254 798.0
YHH3_k127_8247847_1 polyribonucleotide nucleotidyltransferase activity K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 3.188e-242 767.0
YHH3_k127_8247847_10 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0000000000001069 71.0
YHH3_k127_8247847_2 PFAM peptidase M16 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009867 400.0
YHH3_k127_8247847_3 ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005795 275.0
YHH3_k127_8247847_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000009318 246.0
YHH3_k127_8247847_5 tRNA pseudouridylate synthase B C-terminal domain K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000003662 228.0
YHH3_k127_8247847_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000002881 130.0
YHH3_k127_8247847_7 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000002273 115.0
YHH3_k127_8247847_8 Protein of unknown function (DUF503) K09764 - - 0.00000000000000000000002089 102.0
YHH3_k127_8247847_9 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000006439 76.0
YHH3_k127_8258886_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005596 433.0
YHH3_k127_8258886_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000002006 247.0
YHH3_k127_8258886_2 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000000000000005314 197.0
YHH3_k127_8258886_3 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000004625 192.0
YHH3_k127_8258886_4 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000616 171.0
YHH3_k127_8258886_5 Protein of unknown function (DUF2905) - - - 0.00000000000006281 72.0
YHH3_k127_8335805_0 Belongs to the GPI family K01810 - 5.3.1.9 3.363e-289 895.0
YHH3_k127_8335805_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005871 617.0
YHH3_k127_8335805_2 Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP- dependent clade X sub-subfamily K00850 - 2.7.1.11 0.0000000000000000000000000000000000000000000000000000000003713 204.0
YHH3_k127_8335805_3 tocopherol cyclase K09834 - 5.5.1.24 0.000000000000000000000000000000000000002257 160.0
YHH3_k127_8361724_0 2 heme-binding sites K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003129 473.0
YHH3_k127_8361724_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 355.0
YHH3_k127_8361724_2 PFAM aminotransferase class V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003617 279.0
YHH3_k127_8361724_3 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009281 263.0
YHH3_k127_8361724_4 PFAM metal-dependent phosphohydrolase, HD sub domain K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000001343 236.0
YHH3_k127_8361724_5 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000003818 194.0
YHH3_k127_8361724_6 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000003669 175.0
YHH3_k127_8361724_7 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000003034 176.0
YHH3_k127_8361724_8 bacterial (prokaryotic) histone like domain K05788 - - 0.0000000000000000000000009194 106.0
YHH3_k127_8361724_9 Methyltransferase domain - - - 0.000001185 57.0
YHH3_k127_8364048_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004737 439.0
YHH3_k127_8364048_1 KilA-N - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 414.0
YHH3_k127_8364048_2 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000000000000000000000000000000001078 171.0
YHH3_k127_8364048_3 ORF6N domain - - - 0.0000000000000000000000005858 108.0
YHH3_k127_8364048_4 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains K17830 - 1.3.1.101,1.3.7.11 0.000000000000042 85.0
YHH3_k127_8364048_5 4Fe-4S binding domain - - - 0.0000000001309 65.0
YHH3_k127_8394522_0 RmuC family K09760 - - 1.167e-226 712.0
YHH3_k127_8394522_1 Aldo/keto reductase family K07079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 311.0
YHH3_k127_8394522_2 - - - - 0.0000006266 59.0
YHH3_k127_8406018_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 2.205e-214 694.0
YHH3_k127_8406018_1 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 5.002e-211 664.0
YHH3_k127_8406018_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 6.078e-200 629.0
YHH3_k127_8406018_3 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 465.0
YHH3_k127_8406018_4 Domain of unknown function DUF128 K09720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007273 350.0
YHH3_k127_8406018_5 Methylene-tetrahydrofolate reductase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 336.0
YHH3_k127_8406018_6 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.0000000000000000000000000000000000000003151 154.0
YHH3_k127_8406018_7 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000005339 76.0
YHH3_k127_8621878_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004667 624.0
YHH3_k127_8621878_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000004377 182.0
YHH3_k127_8621878_2 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.0000000000182 64.0
YHH3_k127_8622623_0 Bacterial DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1250.0
YHH3_k127_8622623_1 Elongation factor Tu domain 2 K02355 - - 6.563e-246 777.0
YHH3_k127_8622623_10 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000007517 229.0
YHH3_k127_8622623_11 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000003733 226.0
YHH3_k127_8622623_12 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000004714 225.0
YHH3_k127_8622623_13 molybdenum cofactor - - - 0.00000000000000000000000000000000000000000000000000000002317 205.0
YHH3_k127_8622623_14 PFAM Phosphoribosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000004873 204.0
YHH3_k127_8622623_15 Cytidylyltransferase-like K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.00000000000000000000000000000000000000000000000000006806 194.0
YHH3_k127_8622623_16 PFAM HD domain - - - 0.0000000000000000000000000000000000000000000000000002951 194.0
YHH3_k127_8622623_17 Bis-adenosyl-polyphosphate hydrolase, FHIT domain-containing K19710 - 2.7.7.53 0.0000000000000000000000000000000000000000000000000009837 187.0
YHH3_k127_8622623_18 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.000000000000000000000000000000000000000000000000008669 194.0
YHH3_k127_8622623_19 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000000000000000000000000000000007411 156.0
YHH3_k127_8622623_2 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 4.884e-226 711.0
YHH3_k127_8622623_20 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000974 156.0
YHH3_k127_8622623_21 PFAM Peptidase M23 K21471 - - 0.000000000000000000000000000000000008086 147.0
YHH3_k127_8622623_22 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000001342 128.0
YHH3_k127_8622623_23 Belongs to the phosphatidylserine decarboxylase family. PSD-A subfamily K01613 - 4.1.1.65 0.0000000000000000000000000007125 117.0
YHH3_k127_8622623_24 Mut7-C RNAse domain K09122 - - 0.0000000000000000000000101 108.0
YHH3_k127_8622623_25 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.0000000000182 64.0
YHH3_k127_8622623_3 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 1.875e-216 691.0
YHH3_k127_8622623_4 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 1.124e-211 667.0
YHH3_k127_8622623_5 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 520.0
YHH3_k127_8622623_6 smart pdz dhr glgf K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004427 434.0
YHH3_k127_8622623_7 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 343.0
YHH3_k127_8622623_8 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 307.0
YHH3_k127_8622623_9 PFAM ApbE family K09740 - - 0.00000000000000000000000000000000000000000000000000000000000000000004703 239.0
YHH3_k127_8706096_0 Putative ATP-binding cassette K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 380.0
YHH3_k127_8723927_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 555.0
YHH3_k127_8723927_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007643 315.0
YHH3_k127_8723927_2 PFAM ribonuclease BN K07058 - - 0.000000000000000000000000000000000000000000000000000004545 207.0
YHH3_k127_8770781_0 involved in cell wall biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 339.0
YHH3_k127_8770781_1 CotH kinase protein K06330 - - 0.000000000000000000000000000000000000000000000000000000000000382 239.0
YHH3_k127_8770781_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000009039 181.0
YHH3_k127_8770781_3 Domain of unknown function (DUF4956) - - - 0.0000000000000000000000000000000000000003738 157.0
YHH3_k127_8770781_4 VTC domain - - - 0.0000000000000000000000000000000000003036 149.0
YHH3_k127_8770781_5 dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000002866 142.0
YHH3_k127_8770781_6 - - - - 0.00000000000000000128 100.0
YHH3_k127_8770781_7 capsule polysaccharide biosynthetic process - - - 0.000000000000000002765 99.0
YHH3_k127_8770781_8 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000002885 89.0
YHH3_k127_8770781_9 pathogenesis - - - 0.0002404 51.0
YHH3_k127_8790838_0 ATPase (AAA superfamily K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005004 593.0
YHH3_k127_8790838_1 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000094 300.0
YHH3_k127_8790838_2 myo-inosose-2 dehydratase activity - - - 0.000000000000000000000000000000000000000000001784 173.0
YHH3_k127_8790838_3 RelA SpoT domain protein K07816 - 2.7.6.5 0.000000000000000000000000000281 121.0
YHH3_k127_8790838_4 Tetratricopeptide repeat - - - 0.00000000000000001047 88.0
YHH3_k127_8794649_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002547 258.0
YHH3_k127_8794649_1 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.00000000000000000009886 101.0
YHH3_k127_8794649_2 - - - - 0.00000000001167 72.0
YHH3_k127_8794649_3 of the RND superfamily K07003 - - 0.00001208 48.0
YHH3_k127_8798658_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1071.0
YHH3_k127_8798658_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 553.0
YHH3_k127_8798658_10 - - - - 0.00000000000000000000000000000000000005194 148.0
YHH3_k127_8798658_11 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000003255 77.0
YHH3_k127_8798658_2 Belongs to the LarC family K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008788 371.0
YHH3_k127_8798658_3 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 323.0
YHH3_k127_8798658_4 PFAM 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 304.0
YHH3_k127_8798658_5 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007753 307.0
YHH3_k127_8798658_6 SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002168 284.0
YHH3_k127_8798658_7 AIR synthase related protein, C-terminal domain K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004307 284.0
YHH3_k127_8798658_8 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001059 256.0
YHH3_k127_8798658_9 Cytochrome c - - - 0.0000000000000000000000000000000000000000003029 158.0
YHH3_k127_880767_0 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006419 350.0
YHH3_k127_880767_1 Involved in chromosome partitioning - - - 0.0000000000000000000000000001443 120.0
YHH3_k127_880767_2 Phytochromobilin ferredoxin oxidoreductase K08101 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009507,GO:0009536,GO:0009987,GO:0010019,GO:0016491,GO:0016627,GO:0016636,GO:0023052,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0050619,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007 1.3.7.4 0.0000005966 59.0
YHH3_k127_880767_3 - - - - 0.0001373 49.0
YHH3_k127_8813468_0 PFAM Acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002625 562.0
YHH3_k127_8813468_1 PFAM peptidase U32 K08303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007288 462.0
YHH3_k127_8813468_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 425.0
YHH3_k127_8813468_3 PFAM Peptidase M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 305.0
YHH3_k127_8813468_4 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000013 142.0
YHH3_k127_8813468_5 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000963 108.0
YHH3_k127_8813468_6 Ribosomal L32p protein family K02911 - - 0.000000000000000009543 84.0
YHH3_k127_8814196_0 Bacterial type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008483 402.0
YHH3_k127_8814196_1 Type II secretion system (T2SS), protein K K02460 - - 0.0000000000000000000000000000000000000000000000000003159 199.0
YHH3_k127_8814196_2 Type II secretion system (T2SS), protein G K02456 - - 0.0000000000000000000000000000000000000000101 156.0
YHH3_k127_8814196_3 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000000002094 104.0
YHH3_k127_8814196_4 Prokaryotic N-terminal methylation motif K02458 - - 0.00000000000005109 78.0
YHH3_k127_8814196_5 pilus assembly protein PilW K02459 - - 0.000000000002577 78.0
YHH3_k127_8814196_6 fimbrial assembly K02461 - - 0.000000000004048 79.0
YHH3_k127_8814196_7 fimbrial assembly K02461 - - 0.0000000004631 72.0
YHH3_k127_8814196_8 PFAM General secretion pathway protein M K02462 - - 0.000001349 57.0
YHH3_k127_8817164_0 Protein conserved in bacteria - - - 1.424e-256 819.0
YHH3_k127_8817164_1 Pfam Cupin - - - 0.0000000000000000000000000000000000000001007 153.0
YHH3_k127_8817164_2 Exporters of the RND superfamily K07003 - - 0.0000000000000000000000000000000002333 140.0
YHH3_k127_8817164_3 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term K00441 - 1.12.98.1 0.000000000000000001897 99.0
YHH3_k127_8820981_0 PAS domain K13598 - 2.7.13.3 2.074e-236 754.0
YHH3_k127_8820981_1 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K01069,K03797 - 3.1.2.6,3.4.21.102 6.315e-220 690.0
YHH3_k127_8820981_10 Ferric uptake regulator family K09825 - - 0.00000000000000000000000000000000000000000003524 165.0
YHH3_k127_8820981_11 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.00000000000000000000000000000006961 127.0
YHH3_k127_8820981_12 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.0000000000000000000000001105 109.0
YHH3_k127_8820981_13 Cell Wall K01448 - 3.5.1.28 0.00000000000000000003847 106.0
YHH3_k127_8820981_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004982 552.0
YHH3_k127_8820981_3 phosphorelay signal transduction system K02535,K13599,K16363 - 3.5.1.108,4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 525.0
YHH3_k127_8820981_4 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009883 505.0
YHH3_k127_8820981_5 Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006629 474.0
YHH3_k127_8820981_6 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840,K15778 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 470.0
YHH3_k127_8820981_7 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 370.0
YHH3_k127_8820981_8 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005508 325.0
YHH3_k127_8820981_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005911 286.0
YHH3_k127_8905535_0 ferredoxin oxidoreductase beta subunit K00170 - 1.2.7.1 0.00000000000000000000000000000000000000000183 167.0
YHH3_k127_8905535_1 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334,K18330 - 1.12.1.3,1.6.5.3 0.00000000000000000000000000000000000000004416 156.0
YHH3_k127_8928012_0 AcrB/AcrD/AcrF family K07787 - - 0.0 1723.0
YHH3_k127_8928012_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 2.629e-275 869.0
YHH3_k127_8928012_10 Copper ion binding protein K07213 - - 0.0000000000003992 72.0
YHH3_k127_8928012_11 E1-E2 ATPase K17686 - 3.6.3.54 0.0000000005405 62.0
YHH3_k127_8928012_12 COG3901 Regulator of nitric oxide reductase transcription - - - 0.00009597 53.0
YHH3_k127_8928012_2 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 565.0
YHH3_k127_8928012_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 472.0
YHH3_k127_8928012_4 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006701 292.0
YHH3_k127_8928012_5 aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000002324 232.0
YHH3_k127_8928012_6 peptidase m48, ste24p - - - 0.000000000000000000000000000000000000004364 157.0
YHH3_k127_8928012_7 Proto-chlorophyllide reductase 57 kD subunit - - - 0.0000000000000000000000000000000198 138.0
YHH3_k127_8928012_8 Metal-sensitive transcriptional repressor K21600 - - 0.000000000000000000000000001047 115.0
YHH3_k127_8928012_9 O-linked N-acetylglucosamine transferase - - - 0.0000000000001433 79.0
YHH3_k127_8932901_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 1.464e-308 972.0
YHH3_k127_8932901_1 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 1.765e-285 892.0
YHH3_k127_8932901_2 Glycosyl Transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000044 286.0
YHH3_k127_8932901_3 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000001226 250.0
YHH3_k127_8932901_4 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000004507 224.0
YHH3_k127_8932901_5 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000004509 209.0
YHH3_k127_8932901_6 PFAM Sulfotransferase domain - - - 0.0000000000000000000000003648 116.0
YHH3_k127_8932901_7 Lipopolysaccharide kinase (Kdo/WaaP) family - - - 0.000000009202 68.0
YHH3_k127_9033348_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688,K18786 - 2.4.1.321 0.0 1564.0
YHH3_k127_9033348_1 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 555.0
YHH3_k127_9033348_10 EamA-like transporter family - - - 0.0000000000000000000000000000000000002687 153.0
YHH3_k127_9033348_11 Cold shock K03704 - - 0.00000000000000000000000004563 108.0
YHH3_k127_9033348_12 Transcriptional regulator - - - 0.000000000000001385 83.0
YHH3_k127_9033348_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 423.0
YHH3_k127_9033348_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008069 399.0
YHH3_k127_9033348_4 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000957 391.0
YHH3_k127_9033348_5 ABC-2 family transporter protein K09694 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004715 350.0
YHH3_k127_9033348_6 efflux transmembrane transporter activity K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 309.0
YHH3_k127_9033348_7 Psort location Cytoplasmic, score 9.97 K05936 - 2.1.1.133,2.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001019 290.0
YHH3_k127_9033348_8 TIGRFAM precorrin-3B C17-methyltransferase K05934,K21479 - 2.1.1.131,2.1.1.272 0.000000000000000000000000000000000000000000000000000000000000000000000000002408 261.0
YHH3_k127_9033348_9 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000006735 237.0
YHH3_k127_9037640_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 2.677e-218 687.0
YHH3_k127_9037640_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 593.0
YHH3_k127_9037640_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002866 573.0
YHH3_k127_9037640_3 PFAM isocitrate isopropylmalate dehydrogenase K00052,K07246 - 1.1.1.83,1.1.1.85,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 413.0
YHH3_k127_9037640_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000001872 228.0
YHH3_k127_9037640_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000002503 226.0
YHH3_k127_9037640_6 TIGRFAM Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000002206 173.0
YHH3_k127_9042089_0 Protein of unknown function, DUF255 K06888 - - 2.208e-271 852.0
YHH3_k127_9042089_1 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 423.0
YHH3_k127_9042089_10 Rhomboid family K19225 - 3.4.21.105 0.000000000000000000000000000000501 124.0
YHH3_k127_9042089_11 - - - - 0.0000000000000000000000191 105.0
YHH3_k127_9042089_12 Cobalamin B12-binding domain protein K16955,K22491 - - 0.0000000000000000000006492 108.0
YHH3_k127_9042089_13 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000002142 87.0
YHH3_k127_9042089_14 PFAM Tetratricopeptide repeat - - - 0.000000000002186 75.0
YHH3_k127_9042089_15 ABC transporter substrate-binding protein - - - 0.0002518 51.0
YHH3_k127_9042089_16 - - - - 0.0006958 50.0
YHH3_k127_9042089_2 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 377.0
YHH3_k127_9042089_3 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005419 340.0
YHH3_k127_9042089_4 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000004677 242.0
YHH3_k127_9042089_5 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000002981 236.0
YHH3_k127_9042089_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000003058 222.0
YHH3_k127_9042089_7 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000001993 179.0
YHH3_k127_9042089_8 Pfam SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000653 162.0
YHH3_k127_9042089_9 RDD family - - - 0.00000000000000000000000000000000006981 147.0
YHH3_k127_9071377_0 FAD linked oxidase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 312.0
YHH3_k127_9071377_1 FAD linked oxidase domain protein K00104 - 1.1.3.15 0.000000000000000000000000000000000000000000000004709 192.0
YHH3_k127_9071377_2 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000000000000000000000002271 169.0
YHH3_k127_9083313_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 4.168e-253 794.0
YHH3_k127_9083313_1 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006854 526.0
YHH3_k127_9083313_10 gas vesicle protein - - - 0.00000001029 61.0
YHH3_k127_9083313_11 - - - - 0.0000001012 56.0
YHH3_k127_9083313_2 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 412.0
YHH3_k127_9083313_3 COG4448 L-asparaginase II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 359.0
YHH3_k127_9083313_4 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001802 268.0
YHH3_k127_9083313_5 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000000000000000000000000000001958 192.0
YHH3_k127_9083313_6 PFAM Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000000000000000007716 181.0
YHH3_k127_9083313_7 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000002444 152.0
YHH3_k127_9083313_8 Lipid A biosynthesis K02517 - 2.3.1.241 0.00000000000000000000000000000000001271 148.0
YHH3_k127_9083313_9 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.0000000000000000000004606 97.0
YHH3_k127_9105716_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016469,GO:0030312,GO:0032991,GO:0040007,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045259,GO:0045260,GO:0071944,GO:0098796,GO:0098797 3.6.3.14 5.457e-240 751.0
YHH3_k127_9105716_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.497e-234 734.0
YHH3_k127_9105716_10 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000001421 61.0
YHH3_k127_9105716_11 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.000001418 56.0
YHH3_k127_9105716_12 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.00001207 49.0
YHH3_k127_9105716_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002092 249.0
YHH3_k127_9105716_3 Peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000008229 217.0
YHH3_k127_9105716_4 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000000000000000000000000000000002177 222.0
YHH3_k127_9105716_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000001216 110.0
YHH3_k127_9105716_6 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000004658 97.0
YHH3_k127_9105716_7 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000001074 91.0
YHH3_k127_9105716_8 cellulose binding K13735 - - 0.00000000000000504 85.0
YHH3_k127_9105716_9 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000002885 77.0
YHH3_k127_9207721_0 NADH ubiquinone oxidoreductase, NADH-binding K00124,K00335,K18331 - 1.12.1.3,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000574 589.0
YHH3_k127_9220823_0 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 299.0
YHH3_k127_9220823_1 PFAM transglutaminase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002494 288.0
YHH3_k127_9220823_2 Peptidase family M50 - - - 0.00000000000000005561 83.0
YHH3_k127_9302381_0 PFAM Acetyl-CoA hydrolase transferase K18122 - - 5.064e-285 887.0
YHH3_k127_9302381_1 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005662 548.0
YHH3_k127_9302381_2 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 437.0
YHH3_k127_9302381_3 Secondary thiamine-phosphate synthase enzyme - - - 0.0000000000000000000000000000000000000000000000000001694 188.0
YHH3_k127_9302381_4 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.0000000000000000000000000000009829 131.0
YHH3_k127_9302381_5 COG0857 BioD-like N-terminal domain of phosphotransacetylase K06873 - - 0.00000000002085 69.0
YHH3_k127_9353721_0 PFAM Citrate transporter - - - 1.597e-199 637.0
YHH3_k127_9353721_1 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 561.0
YHH3_k127_9353721_2 Belongs to the DEAD box helicase family K03732 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 487.0
YHH3_k127_9353721_3 Sodium:sulfate symporter transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 392.0
YHH3_k127_9403828_0 PFAM glycosyl transferase family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 2.434e-267 842.0
YHH3_k127_9403828_1 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009121 528.0
YHH3_k127_9403828_2 PFAM TrkA-N domain K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009528 424.0
YHH3_k127_9403828_3 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 385.0
YHH3_k127_9403828_4 transmembrane transport - - - 0.0000000000000000000000000000000000000000000004823 172.0
YHH3_k127_9456243_0 TIGRFAM leucyl-tRNA synthetase K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1185.0
YHH3_k127_9456243_1 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 3.307e-194 623.0
YHH3_k127_9456243_10 Could be involved in insertion of integral membrane proteins into the membrane K08998 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0031224,GO:0031226,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 0.000000000000000000006285 93.0
YHH3_k127_9456243_11 Lipopolysaccharide-assembly - - - 0.000000000000000006671 90.0
YHH3_k127_9456243_12 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000000009738 89.0
YHH3_k127_9456243_13 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000001644 84.0
YHH3_k127_9456243_14 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000002089 76.0
YHH3_k127_9456243_15 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000002437 67.0
YHH3_k127_9456243_16 Transposase - - - 0.000000003096 59.0
YHH3_k127_9456243_17 PFAM nitroreductase - - - 0.00000001796 60.0
YHH3_k127_9456243_18 ThiS family K03636 - - 0.0000001424 58.0
YHH3_k127_9456243_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005822 443.0
YHH3_k127_9456243_3 PFAM WD domain, G-beta repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008373 413.0
YHH3_k127_9456243_4 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 389.0
YHH3_k127_9456243_5 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000006988 211.0
YHH3_k127_9456243_6 negative regulation of transforming growth factor beta1 production K03068,K06261,K06593,K08867,K09187,K12488,K13738,K14972,K20050,K20371 GO:0000003,GO:0001654,GO:0001667,GO:0001745,GO:0002064,GO:0002065,GO:0002066,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005938,GO:0006928,GO:0006996,GO:0007010,GO:0007015,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0007423,GO:0008150,GO:0009653,GO:0009887,GO:0009888,GO:0009987,GO:0010564,GO:0010631,GO:0016020,GO:0016043,GO:0016477,GO:0017124,GO:0019904,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0030029,GO:0030036,GO:0030100,GO:0030154,GO:0030496,GO:0030707,GO:0030855,GO:0032153,GO:0032154,GO:0032155,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032794,GO:0032879,GO:0034329,GO:0034330,GO:0034332,GO:0034333,GO:0040011,GO:0043062,GO:0043063,GO:0044085,GO:0044421,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044459,GO:0044464,GO:0044703,GO:0045171,GO:0045177,GO:0045179,GO:0045216,GO:0045807,GO:0048259,GO:0048260,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048592,GO:0048609,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050794,GO:0050839,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051302,GO:0051674,GO:0051704,GO:0051726,GO:0060429,GO:0060627,GO:0065007,GO:0071840,GO:0071944,GO:0090130,GO:0090132,GO:0090596,GO:0097435,GO:0098590,GO:0099568,GO:0099738 2.1.1.43,2.7.11.1 0.000000000000000000000000000000094 145.0
YHH3_k127_9456243_7 Methyltransferase K00567 - 2.1.1.63 0.0000000000000000000000000000005453 129.0
YHH3_k127_9456243_8 4 iron, 4 sulfur cluster binding K03522,K13795,K15511,K19516 - 1.14.13.208 0.000000000000000000000000000003248 128.0
YHH3_k127_9456243_9 R3H domain protein K06346 - - 0.000000000000000000001626 99.0
YHH3_k127_9549450_0 PFAM transposase IS204 IS1001 IS1096 IS1165 family protein K07485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 506.0
YHH3_k127_9549450_1 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005597 311.0
YHH3_k127_9549450_2 Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000006759 188.0
YHH3_k127_9549450_3 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000001923 169.0
YHH3_k127_9549450_4 Integrase core domain K07497 - - 0.00000000000000000004218 91.0
YHH3_k127_9631078_0 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000009194 213.0
YHH3_k127_9631078_1 - - - - 0.00000000000000001983 82.0
YHH3_k127_9631078_2 oligosaccharyl transferase activity - - - 0.0000001434 64.0
YHH3_k127_9713493_0 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 508.0
YHH3_k127_9713493_1 Tetrapyrrole (Corrin/Porphyrin) Methylases K01719,K02302,K02303,K13542 GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 453.0
YHH3_k127_9713493_10 geranylgeranyl reductase K17830 - 1.3.1.101,1.3.7.11 0.00000004475 65.0
YHH3_k127_9713493_11 Catalyzes the insertion of Co(2 ) into sirohydrochlorin K02190 - 4.99.1.3 0.0002622 52.0
YHH3_k127_9713493_2 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004919 440.0
YHH3_k127_9713493_3 Tetrapyrrole (Corrin/Porphyrin) Methylases K00595 - 2.1.1.132 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 304.0
YHH3_k127_9713493_4 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007071 276.0
YHH3_k127_9713493_5 Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A K02188 - 2.1.1.195 0.00000000000000000000000000000000000000000000000000000000000000000000000001177 265.0
YHH3_k127_9713493_6 Tetrapyrrole (Corrin/Porphyrin) Methylases K03394 - 2.1.1.130,2.1.1.151 0.000000000000000000000000000000000000000000000000000003467 199.0
YHH3_k127_9713493_7 PFAM Precorrin-8X methylmutase K06042 - 5.4.99.60,5.4.99.61 0.0000000000000000000000000000000000000000000000000000186 195.0
YHH3_k127_9713493_8 TIGRFAM siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000005009 156.0
YHH3_k127_9713493_9 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000001074 125.0
YHH3_k127_9727364_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 5.839e-279 877.0
YHH3_k127_9727364_1 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 307.0
YHH3_k127_9727364_2 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000001114 195.0
YHH3_k127_9727364_3 Amino acid permease K03294 - - 0.00000000241 59.0
YHH3_k127_9737614_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K02652 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 2.103e-196 627.0
YHH3_k127_9737614_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 555.0
YHH3_k127_9737614_2 sulfate adenylyltransferase K00958 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 519.0
YHH3_k127_9737614_3 - - - - 0.000000001448 60.0
YHH3_k127_9737614_4 Type II secretion system (T2SS), protein F K02455 - - 0.0000000174 56.0
YHH3_k127_9757471_0 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 3.431e-195 619.0
YHH3_k127_9757471_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652,K01906 - 2.3.1.29,2.3.1.47,6.2.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003248 416.0
YHH3_k127_9757471_2 Belongs to the precorrin methyltransferase family K13542 - 2.1.1.107,4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000002189 273.0
YHH3_k127_9757471_3 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.0000000000000000000000000000000000000000000000000000001084 205.0
YHH3_k127_9757471_4 PFAM alpha beta hydrolase fold K02170 - 3.1.1.85 0.0000000000000000000000000000000000000000000000002375 187.0
YHH3_k127_9757471_5 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0017144,GO:0018130,GO:0019752,GO:0032259,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.197 0.00000000000000000000000000000000000000000002016 175.0
YHH3_k127_9769701_0 PFAM CBS domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007979 323.0
YHH3_k127_9769701_1 Transporter associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002406 241.0
YHH3_k127_9816866_0 aldo keto reductase K07079 - - 0.00001098 48.0
YHH3_k127_9817848_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 486.0
YHH3_k127_9817848_1 pfkB family carbohydrate kinase K18478 - 2.7.1.184 0.0000000000000000000000000000000000000000000000000000000000000000000794 243.0
YHH3_k127_9817848_2 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000001075 241.0
YHH3_k127_9817848_3 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000002224 177.0
YHH3_k127_9817848_4 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.00000000000000000000000000000000000000001769 157.0
YHH3_k127_9817848_5 TPR repeat - - - 0.00000000000001108 81.0
YHH3_k127_9817848_6 Glyoxalase-like domain K01759,K05606 - 4.4.1.5,5.1.99.1 0.0000000006271 65.0
YHH3_k127_9842886_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1079.0
YHH3_k127_9842886_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005678 618.0
YHH3_k127_9842886_2 PFAM Type II secretion system protein E K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 610.0
YHH3_k127_9842886_3 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 314.0
YHH3_k127_9842886_4 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009093 310.0
YHH3_k127_9842886_5 Adenosine specific kinase K09129 - - 0.000000000000000000000000000000000000000000000000000000001361 202.0
YHH3_k127_9853359_0 Proton-conducting membrane transporter K05568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 458.0
YHH3_k127_9853359_1 PFAM NADH Ubiquinone plastoquinone (complex I) K05568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 443.0
YHH3_k127_9853359_2 Na+/H+ ion antiporter subunit K05569 - - 0.000000000000000000000000000000000000002697 153.0
YHH3_k127_9853359_3 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K05567 - - 0.00000000000000000000000000000000000004813 147.0
YHH3_k127_9853359_4 Domain related to MnhB subunit of Na+/H+ antiporter K05566 - - 0.0000000000000000000000000000000000001204 146.0
YHH3_k127_9853359_5 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000003617 116.0
YHH3_k127_9853359_6 Domain related to MnhB subunit of Na+/H+ antiporter K05566 - - 0.000000000000000000000000007658 112.0
YHH3_k127_9853359_7 PFAM Na H antiporter subunit K05571 - - 0.0000000000000000000000001101 111.0
YHH3_k127_9853359_8 Multiple resistance and pH regulation protein F (MrpF / PhaF) K05570 - - 0.000000000000000000000009178 102.0
YHH3_k127_9853359_9 Domain of unknown function (DUF4040) - - - 0.000000000000000000004449 94.0
YHH3_k127_9884519_0 imidazoleglycerol-phosphate dehydratase activity K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000008278 262.0
YHH3_k127_9884519_1 ParB-like nuclease domain K03497 - - 0.000000000000000000000000000000003347 141.0
YHH3_k127_9884519_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000001466 98.0
YHH3_k127_9884519_3 DNA photolyase activity K03716 - 4.1.99.14 0.00001897 49.0
YHH3_k127_9949130_0 Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007865 458.0
YHH3_k127_9949130_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 394.0
YHH3_k127_9949130_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006384 362.0
YHH3_k127_9949130_3 Binding-protein-dependent transport system inner membrane component K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 296.0
YHH3_k127_9949130_4 negative regulation of phosphate transmembrane transport K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0060255,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.000000000000000000000000000000000000000000000003457 181.0
YHH3_k127_9949130_5 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000003342 127.0
YHH3_k127_9949130_6 lipocalin K03098 - - 0.000000000000000000000000004481 123.0
YHH3_k127_9949130_7 Outer membrane lipoprotein Blc K03098 - - 0.0000000000000000000000003091 117.0
YHH3_k127_9949130_8 PKD domain - - - 0.00000000000000000000006867 115.0
YHH3_k127_9949130_9 Cytochrome c - - - 0.0000000000000000001554 97.0
YHH3_k127_9975051_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1435.0
YHH3_k127_9975051_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600,K18847 - 2.1.2.1,2.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005466 597.0
YHH3_k127_9975051_10 retrograde transport, endosome to Golgi K07095 - - 0.000000000000000000000000000000000000000631 156.0
YHH3_k127_9975051_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 589.0
YHH3_k127_9975051_3 PFAM Glycosyl transferase family 2 K21349 - 2.4.1.268 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000861 577.0
YHH3_k127_9975051_4 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004433 578.0
YHH3_k127_9975051_5 Belongs to the CarA family K01956 GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 494.0
YHH3_k127_9975051_6 MOFRL family K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004677 446.0
YHH3_k127_9975051_7 haloacid dehalogenase-like hydrolase K07026 - 3.1.3.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 296.0
YHH3_k127_9975051_8 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses K01916,K01950 - 6.3.1.5,6.3.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000005101 244.0
YHH3_k127_9975051_9 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000000000000000000000009694 216.0
YHH3_k127_9996091_0 Carbamoyl-phosphate synthetase large chain, oligomerisation K01955 - 6.3.5.5 0.0 1673.0
YHH3_k127_9996091_1 Glutamine phosphoribosylpyrophosphate amidotransferase K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 613.0
YHH3_k127_9996091_2 histidine kinase, HAMP K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006835 286.0
YHH3_k127_9996091_3 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000000005181 239.0
YHH3_k127_9996091_4 Protein of unknown function (DUF1566) - - - 0.0000000002906 65.0