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Overview

ID MAG04574
Name YHH3_bin.38
Sample SMP0123
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family Gallionellaceae
Genus Gallionella
Species
Assembly information
Completeness (%) 92.8
Contamination (%) 1.8
GC content (%) 51.0
N50 (bp) 23,488
Genome size (bp) 2,326,632

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2235

Gene name Description KEGG GOs EC E-value Score Sequence
YHH3_k127_1003116_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1477.0
YHH3_k127_1003116_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0 1319.0
YHH3_k127_1003116_10 Viral (Superfamily 1) RNA helicase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 381.0
YHH3_k127_1003116_11 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009795 337.0
YHH3_k127_1003116_13 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000000000000000004384 217.0
YHH3_k127_1003116_14 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000007243 175.0
YHH3_k127_1003116_15 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000000000000000001701 136.0
YHH3_k127_1003116_16 response regulator - - - 0.000000000000000000000000000000004354 134.0
YHH3_k127_1003116_17 Smr domain - - - 0.0000000000000000000000000000002497 131.0
YHH3_k127_1003116_18 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.00000000000000001002 84.0
YHH3_k127_1003116_2 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 6.6e-322 999.0
YHH3_k127_1003116_20 Domain of unknown function (DUF4124) - - - 0.00001073 53.0
YHH3_k127_1003116_3 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 5.225e-270 833.0
YHH3_k127_1003116_4 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 1.308e-200 632.0
YHH3_k127_1003116_5 HflC and HflK could encode or regulate a protease K04088 - - 9.897e-199 625.0
YHH3_k127_1003116_6 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009542 569.0
YHH3_k127_1003116_7 Carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007705 528.0
YHH3_k127_1003116_8 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 488.0
YHH3_k127_1003116_9 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007986 434.0
YHH3_k127_10082675_0 Inorganic H+ pyrophosphatase K15987 - 3.6.1.1 0.0 1190.0
YHH3_k127_10082675_1 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0 1003.0
YHH3_k127_10082675_10 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004244 407.0
YHH3_k127_10082675_11 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 381.0
YHH3_k127_10082675_12 chemotaxis K03406,K05875 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 394.0
YHH3_k127_10082675_13 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 349.0
YHH3_k127_10082675_14 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 322.0
YHH3_k127_10082675_15 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 289.0
YHH3_k127_10082675_16 Haem-degrading - - - 0.00000000000000000000000000000000000000000000000000000000002067 208.0
YHH3_k127_10082675_17 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000000000000000000000000000000000000000000235 191.0
YHH3_k127_10082675_18 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.00000000000000000000000000000000000000000003226 162.0
YHH3_k127_10082675_19 Pfam:DUF1049 K08992 - - 0.000000000000000000009795 94.0
YHH3_k127_10082675_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 7.191e-318 983.0
YHH3_k127_10082675_20 Belongs to the UPF0434 family K09791 - - 0.0000000000000003914 79.0
YHH3_k127_10082675_3 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 1.582e-216 673.0
YHH3_k127_10082675_4 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 593.0
YHH3_k127_10082675_5 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 557.0
YHH3_k127_10082675_6 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 554.0
YHH3_k127_10082675_7 Pyridoxal-phosphate dependent enzyme K12339 GO:0000003,GO:0000096,GO:0000097,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005777,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0007568,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009507,GO:0009532,GO:0009536,GO:0009566,GO:0009567,GO:0009570,GO:0009653,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016049,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0019953,GO:0022414,GO:0030154,GO:0030170,GO:0031090,GO:0032501,GO:0032502,GO:0032989,GO:0036094,GO:0040007,GO:0042221,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046394,GO:0046686,GO:0048037,GO:0048046,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050662,GO:0050896,GO:0051704,GO:0060560,GO:0070279,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 523.0
YHH3_k127_10082675_8 pfkB family carbohydrate kinase K03272,K21344 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 519.0
YHH3_k127_10082675_9 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 430.0
YHH3_k127_10177951_0 Sugar (and other) transporter - - - 1.254e-211 666.0
YHH3_k127_10177951_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009101 522.0
YHH3_k127_10177951_2 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000002938 226.0
YHH3_k127_10177951_3 addiction module killer protein - - - 0.000000000000000000000000000000000000000000000000000004379 190.0
YHH3_k127_10177951_4 addiction module antidote protein - - - 0.000000000000000000000000000000000000000000000000002751 183.0
YHH3_k127_10177951_5 Belongs to the BolA IbaG family - - - 0.000000000000000000000000000000005591 129.0
YHH3_k127_10220904_0 General secretory system II protein E domain protein K02454,K02652,K12276 - - 1.054e-299 926.0
YHH3_k127_10220904_1 PFAM type II and III secretion system protein K02453 - - 6.946e-207 659.0
YHH3_k127_10220904_10 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000000000000002429 202.0
YHH3_k127_10220904_11 - - - - 0.000000000000000000000000000000000000000000000002604 180.0
YHH3_k127_10220904_12 PFAM Sulfate transporter antisigma-factor antagonist STAS K07122 - - 0.0000000000000000000000007017 106.0
YHH3_k127_10220904_13 - - - - 0.0000000000000001839 84.0
YHH3_k127_10220904_14 Pfam Transposase - - - 0.0004317 43.0
YHH3_k127_10220904_2 PFAM Type II secretion system F domain K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 586.0
YHH3_k127_10220904_3 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000599 586.0
YHH3_k127_10220904_4 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 485.0
YHH3_k127_10220904_5 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 463.0
YHH3_k127_10220904_6 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 433.0
YHH3_k127_10220904_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 441.0
YHH3_k127_10220904_8 PFAM Mammalian cell entry related domain protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001306 270.0
YHH3_k127_10220904_9 MlaC protein K07323 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002393 244.0
YHH3_k127_1022262_0 Nitrite and sulphite reductase 4Fe-4S domain K11180 - 1.8.99.5 4.301e-241 749.0
YHH3_k127_1022262_1 Nitrite and sulphite reductase 4Fe-4S domain K11181 - 1.8.99.5 1.232e-218 679.0
YHH3_k127_1022262_10 Nitrate reductase gamma subunit - - - 0.000000000002068 68.0
YHH3_k127_1022262_2 DsrE/DsrF-like family K07235 - - 0.000000000000000000000000000000000000000000000000000000000000008163 218.0
YHH3_k127_1022262_3 - - - - 0.0000000000000000000000000000000000000000000000000000000001428 209.0
YHH3_k127_1022262_4 DsrE/DsrF-like family K07236 - - 0.0000000000000000000000000000000000000000000000000000000003229 204.0
YHH3_k127_1022262_5 DsrC like protein K11179 - - 0.0000000000000000000000000000000000000000000000000000002714 195.0
YHH3_k127_1022262_6 DsrC like protein K11179 - - 0.000000000000000000000000000000000000000000000000000001464 192.0
YHH3_k127_1022262_7 Cas6 Crispr - - - 0.0000000000000000000000000000000000000000000005656 173.0
YHH3_k127_1022262_8 DsrH like protein K07237 - - 0.000000000000000000000000000000000000000614 149.0
YHH3_k127_1022262_9 - - - - 0.00000000000000000000000001282 110.0
YHH3_k127_10302893_0 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 512.0
YHH3_k127_10302893_1 Pfam:DUF91 K07448 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 440.0
YHH3_k127_10302893_2 restriction endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000718 404.0
YHH3_k127_10302893_3 restriction endonuclease K07448 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 379.0
YHH3_k127_10302893_4 Protein of unknown function DUF86 - - - 0.0000000000000000000000000000000000000000000000002601 181.0
YHH3_k127_10302893_5 Nucleotidyltransferase domain K07075 - - 0.0000000000000000000000000000000000000006952 149.0
YHH3_k127_10452620_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 7.285e-248 771.0
YHH3_k127_10452620_1 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 3.295e-230 724.0
YHH3_k127_10452620_10 Protein of unknown function (DUF3301) - - - 0.000000000000000000000000000000000005561 140.0
YHH3_k127_10452620_11 DsrE/DsrF-like family - - - 0.00000000000000000000000000000000003341 140.0
YHH3_k127_10452620_12 CAAX protease self-immunity K07052 - - 0.000000000000000000000113 104.0
YHH3_k127_10452620_13 homology - - - 0.0000000000000000000006154 98.0
YHH3_k127_10452620_14 SlyX K03745 - - 0.00000000000000000003129 92.0
YHH3_k127_10452620_15 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000007758 90.0
YHH3_k127_10452620_16 - - - - 0.000000000000001203 78.0
YHH3_k127_10452620_17 OmpA-like transmembrane domain K03286 - - 0.00000001375 63.0
YHH3_k127_10452620_2 LVIVD repeat - - - 3.416e-212 695.0
YHH3_k127_10452620_3 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 578.0
YHH3_k127_10452620_4 Nucleotidyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 386.0
YHH3_k127_10452620_5 glycerophosphodiester phosphodiesterase activity K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009818 348.0
YHH3_k127_10452620_6 Protein of unknown function (DUF3365) - - - 0.00000000000000000000000000000000000000000000000000000000005501 210.0
YHH3_k127_10452620_8 - - - - 0.000000000000000000000000000000000000000000000000000001362 214.0
YHH3_k127_10452620_9 PFAM Cold-shock protein, DNA-binding K03704 - - 0.000000000000000000000000000000000001436 138.0
YHH3_k127_1057761_0 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 0.0 2020.0
YHH3_k127_1057761_1 PFAM sodium hydrogen exchanger - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009583 542.0
YHH3_k127_1057761_2 Oxidoreductase FAD-binding domain K14581 - 1.18.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 473.0
YHH3_k127_1057761_3 COG2346, Truncated hemoglobins K03406,K06886 GO:0001505,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008941,GO:0009056,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0016491,GO:0016705,GO:0016708,GO:0017144,GO:0019825,GO:0020012,GO:0020037,GO:0030682,GO:0034641,GO:0036094,GO:0042133,GO:0042135,GO:0042221,GO:0042737,GO:0043207,GO:0044237,GO:0044248,GO:0044270,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046209,GO:0046210,GO:0046906,GO:0048037,GO:0050896,GO:0051213,GO:0051410,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0065007,GO:0065008,GO:0072593,GO:0075136,GO:0097159,GO:0098754,GO:1901363,GO:1901698,GO:2001057 - 0.00000000000000000000000000000000000000000000000000000000000000003379 224.0
YHH3_k127_1057761_4 TIGRFAM transcriptional regulator, Rrf2 family K13771 - - 0.000000000000000000000000000000000000000000000000000000005565 203.0
YHH3_k127_1057761_5 - - - - 0.0000000000000000000000000000000000000000001621 169.0
YHH3_k127_1057761_6 - - - - 0.00000006238 55.0
YHH3_k127_1058644_0 Histidine Phosphotransfer domain K02487,K06596 - - 0.0 1510.0
YHH3_k127_1058644_1 PFAM TrkA-N domain protein K03499 - - 5.823e-254 787.0
YHH3_k127_1058644_10 Two component signalling adaptor domain K02659 - - 0.00000000000000000000000000000000000000000000000006587 184.0
YHH3_k127_1058644_11 cheY-homologous receiver domain K02658 - - 0.000000000000000000000000000000000000000001159 159.0
YHH3_k127_1058644_12 Tautomerase enzyme K01821 - 5.3.2.6 0.0000000000000000000000000005588 116.0
YHH3_k127_1058644_13 ABC-type nitrate sulfonate bicarbonate transport system, periplasmic component K02051 - - 0.00000000000000000022 100.0
YHH3_k127_1058644_2 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 1.959e-247 770.0
YHH3_k127_1058644_3 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 3.243e-211 660.0
YHH3_k127_1058644_4 histidine kinase HAMP region domain protein K02660,K03406 - - 7.294e-198 636.0
YHH3_k127_1058644_5 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004019 563.0
YHH3_k127_1058644_6 Inositol monophosphatase family K01082,K01092 - 3.1.3.25,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 416.0
YHH3_k127_1058644_7 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003157 363.0
YHH3_k127_1058644_8 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 343.0
YHH3_k127_1058644_9 cheY-homologous receiver domain K02657 - - 0.000000000000000000000000000000000000000000000000000000000000005178 218.0
YHH3_k127_1058658_0 SMART AAA ATPase K02450 - - 4.895e-236 741.0
YHH3_k127_1058658_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 7.843e-230 721.0
YHH3_k127_1058658_10 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 387.0
YHH3_k127_1058658_11 Phosphoesterase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003418 383.0
YHH3_k127_1058658_12 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 389.0
YHH3_k127_1058658_13 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 366.0
YHH3_k127_1058658_14 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008234 351.0
YHH3_k127_1058658_15 TIGRFAM cell division ATP-binding protein FtsE K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 348.0
YHH3_k127_1058658_16 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006672 347.0
YHH3_k127_1058658_17 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 346.0
YHH3_k127_1058658_18 Thiopurine S-methyltransferase (TPMT) K00569 - 2.1.1.67 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004853 315.0
YHH3_k127_1058658_19 Phytochelatin synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006336 281.0
YHH3_k127_1058658_2 Belongs to the peptidase M16 family K07263 - - 7.299e-220 689.0
YHH3_k127_1058658_20 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000000000000000000000000000008515 263.0
YHH3_k127_1058658_21 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000001656 256.0
YHH3_k127_1058658_22 Outer membrane lipoprotein LolB K02494 - - 0.000000000000000000000000000000000000000000000000345 182.0
YHH3_k127_1058658_23 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000001106 162.0
YHH3_k127_1058658_24 Domain of unknown function (DUF5062) - - - 0.00000000000000000000000000000000000000000004322 161.0
YHH3_k127_1058658_25 Type II secretion system protein B K02451 - - 0.000000000000000000000169 105.0
YHH3_k127_1058658_3 Peptidase M16 inactive domain K07263 - - 3.431e-208 655.0
YHH3_k127_1058658_4 Tetratricopeptide repeats - - - 3.8e-206 657.0
YHH3_k127_1058658_5 ABC-type uncharacterized transport system - - - 1.534e-199 630.0
YHH3_k127_1058658_6 Belongs to the radical SAM superfamily. RlmN family K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008692 535.0
YHH3_k127_1058658_7 EAL domain K21024 - 3.1.4.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 479.0
YHH3_k127_1058658_8 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 460.0
YHH3_k127_1058658_9 SRP54-type protein, helical bundle domain K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 407.0
YHH3_k127_1058722_0 Ammonium Transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007249 594.0
YHH3_k127_1058722_1 DNA methylase K00571,K00590 - 2.1.1.113,2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 428.0
YHH3_k127_1058722_10 Helix-turn-helix - - - 0.000000000000006193 77.0
YHH3_k127_1058722_11 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.0000000001615 65.0
YHH3_k127_1058722_12 Membrane - - - 0.0000006149 59.0
YHH3_k127_1058722_13 This gene assignment is based in part on its position within a multicopy insertion sequence directly adjacent to an ORF matching several IS3 family transposases usign a blastp analysis - - - 0.000008278 48.0
YHH3_k127_1058722_2 Resolvase, N terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 399.0
YHH3_k127_1058722_3 IrrE N-terminal-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005545 292.0
YHH3_k127_1058722_4 Type II site-specific deoxyribonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000005899 242.0
YHH3_k127_1058722_5 Belongs to the P(II) protein family K04752 - - 0.000000000000000000000000000000000000000000000000000000000008266 207.0
YHH3_k127_1058722_6 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000000000000000000000000009001 206.0
YHH3_k127_1058722_7 Pfam matches to PF08238.7 Sel1, and to PF08238.7 Sel1, and to PF08238.7 Sel1, and to PF08238.7 Sel1 K07126 - - 0.00000000000000000000000000000000000000001377 173.0
YHH3_k127_1058722_8 Membrane fusogenic activity K09806 - - 0.000000000000000000000000455 108.0
YHH3_k127_1058722_9 - - - - 0.00000000000000000001055 100.0
YHH3_k127_1060667_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0 1595.0
YHH3_k127_1060667_1 haemagglutination activity domain - - - 1.041e-200 649.0
YHH3_k127_1060667_10 Rhodanese Homology Domain - - - 0.0000000000000000000000000002549 119.0
YHH3_k127_1060667_11 ThiS family K03154 - - 0.0000000000000000000005744 96.0
YHH3_k127_1060667_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006823 608.0
YHH3_k127_1060667_3 Virulence factor membrane-bound polymerase, C-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007325 509.0
YHH3_k127_1060667_4 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 468.0
YHH3_k127_1060667_5 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003123 441.0
YHH3_k127_1060667_6 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 400.0
YHH3_k127_1060667_7 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.000000000000000000000000000000000000000000000000000000000003622 211.0
YHH3_k127_1060667_8 Bacterial SH3 domain - - - 0.000000000000000000000000000000000000000000000000000002584 194.0
YHH3_k127_1060667_9 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.000000000000000000000000000000003595 130.0
YHH3_k127_10671611_0 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 0.0 1115.0
YHH3_k127_10671611_1 Chromate Ion Transporter K07240 - - 4.344e-222 695.0
YHH3_k127_10671611_10 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006719 435.0
YHH3_k127_10671611_11 Capsule polysaccharide biosynthesis protein K07266 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 440.0
YHH3_k127_10671611_12 glycosyl transferase group 1 K00786,K12994 - 2.4.1.349 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 429.0
YHH3_k127_10671611_13 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000721 405.0
YHH3_k127_10671611_14 ABC-2 type transporter K09688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003359 392.0
YHH3_k127_10671611_15 Protein of unknown function (DUF3025) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000766 373.0
YHH3_k127_10671611_16 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 377.0
YHH3_k127_10671611_17 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 335.0
YHH3_k127_10671611_18 ABC transporter K09689 - 3.6.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 325.0
YHH3_k127_10671611_19 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008882 323.0
YHH3_k127_10671611_2 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 2.334e-219 688.0
YHH3_k127_10671611_20 Lysin motif K06194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 314.0
YHH3_k127_10671611_21 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001639 235.0
YHH3_k127_10671611_22 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000000000000000000000000000000000000001042 189.0
YHH3_k127_10671611_23 Fic/DOC family K07341 - - 0.0000000000000000000000000000000000000000000000000001693 190.0
YHH3_k127_10671611_24 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000001104 186.0
YHH3_k127_10671611_25 Phage derived protein Gp49-like (DUF891) - - - 0.00000000000000000000000000000000000000000000001542 172.0
YHH3_k127_10671611_26 CopG antitoxin of type II toxin-antitoxin system - - - 0.0000000000000000000000000000000000000000001907 162.0
YHH3_k127_10671611_27 PFAM SpoVT AbrB domain protein - - - 0.0000000000000000000000000000000001285 133.0
YHH3_k127_10671611_28 PFAM SpoVT AbrB - - - 0.0000000000000000000000000000001146 127.0
YHH3_k127_10671611_29 Nucleotidyltransferase domain K07075 - - 0.000000000000000000000000000000197 126.0
YHH3_k127_10671611_3 Polysaccharide biosynthesis protein K01711 - 4.2.1.47 2.933e-216 674.0
YHH3_k127_10671611_30 sequence-specific DNA binding - - - 0.0000000000000000000000001765 109.0
YHH3_k127_10671611_31 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.000000000002865 70.0
YHH3_k127_10671611_32 - - - - 0.0000000001306 73.0
YHH3_k127_10671611_4 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 492.0
YHH3_k127_10671611_5 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 485.0
YHH3_k127_10671611_6 COG3524 Capsule polysaccharide export protein K10107 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005501 488.0
YHH3_k127_10671611_7 polysaccharide export K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 481.0
YHH3_k127_10671611_8 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005303 448.0
YHH3_k127_10671611_9 GDP-mannose 4,6 dehydratase K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 445.0
YHH3_k127_10779252_0 denitrification pathway K15876 GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0044237,GO:0044425,GO:0045333,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 313.0
YHH3_k127_10779252_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000000000000000004841 215.0
YHH3_k127_10899614_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.0 1286.0
YHH3_k127_10899614_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.0 1009.0
YHH3_k127_10899614_10 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001618 266.0
YHH3_k127_10899614_11 Belongs to the P(II) protein family K04751,K04752 - - 0.00000000000000000000000000000000000000000000000000000001131 199.0
YHH3_k127_10899614_12 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000002789 196.0
YHH3_k127_10899614_13 COG2863 Cytochrome c553 - - - 0.00000000000000000000000000000000147 141.0
YHH3_k127_10899614_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.079e-275 852.0
YHH3_k127_10899614_3 MacB-like periplasmic core domain K02004 - - 1.142e-196 621.0
YHH3_k127_10899614_4 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007208 518.0
YHH3_k127_10899614_5 Metallopeptidase family M24 K01265 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 494.0
YHH3_k127_10899614_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005549 471.0
YHH3_k127_10899614_7 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 344.0
YHH3_k127_10899614_8 PFAM Ankyrin K10799 - 2.4.2.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000097 292.0
YHH3_k127_10899614_9 TIGRFAM phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 289.0
YHH3_k127_10913109_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 3.079e-219 685.0
YHH3_k127_10913109_1 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 419.0
YHH3_k127_10913109_2 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005692 383.0
YHH3_k127_10913109_3 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003086 293.0
YHH3_k127_10956590_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1519.0
YHH3_k127_10956590_1 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 2.9e-311 962.0
YHH3_k127_10956590_10 FecR protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003574 258.0
YHH3_k127_10956590_11 - - - - 0.0000000000000000000000000000000000000000002568 166.0
YHH3_k127_10956590_12 FeoA K04758 - - 0.000000000000000000000003333 103.0
YHH3_k127_10956590_13 PFAM Integrase catalytic region K07497 - - 0.0000000003799 61.0
YHH3_k127_10956590_14 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.0003638 46.0
YHH3_k127_10956590_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000609 510.0
YHH3_k127_10956590_3 PFAM metallophosphoesterase K07098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 513.0
YHH3_k127_10956590_4 Methyl-accepting chemotaxis protein (MCP) signaling domain, PAS fold K03406,K03776,K05874,K05875 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 487.0
YHH3_k127_10956590_5 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000555 395.0
YHH3_k127_10956590_6 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007013 379.0
YHH3_k127_10956590_7 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 370.0
YHH3_k127_10956590_8 NlpB/DapX lipoprotein K07287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004645 364.0
YHH3_k127_10956590_9 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 358.0
YHH3_k127_110840_0 PFAM ABC-1 domain protein K03688 - - 9.479e-290 898.0
YHH3_k127_110840_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102 - - 7.204e-228 711.0
YHH3_k127_110840_10 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009134 321.0
YHH3_k127_110840_11 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 296.0
YHH3_k127_110840_12 ribosomal large subunit export from nucleus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009658 257.0
YHH3_k127_110840_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002094 254.0
YHH3_k127_110840_14 von Willebrand factor, type A K07114,K16257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005137 258.0
YHH3_k127_110840_15 protein (some members contain a von Willebrand factor type A (vWA) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000008641 245.0
YHH3_k127_110840_16 PFAM PEBP family protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000000000001815 235.0
YHH3_k127_110840_17 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000000000000000000000001455 233.0
YHH3_k127_110840_18 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001046 234.0
YHH3_k127_110840_19 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000000001301 222.0
YHH3_k127_110840_2 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 617.0
YHH3_k127_110840_20 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000000000000000000005875 201.0
YHH3_k127_110840_21 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000008189 184.0
YHH3_k127_110840_22 Protein of Unknown function (DUF2784) - - - 0.0000000000000000000000000000000000000000000000001475 179.0
YHH3_k127_110840_23 Hsp20/alpha crystallin family - - - 0.0000000000000000000000000000000000000000000001991 171.0
YHH3_k127_110840_24 TIGRFAM succinate dehydrogenase, cytochrome b556 subunit K00241 - - 0.000000000000000000000000000000000000000000001066 168.0
YHH3_k127_110840_25 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.000000000000000000000000000000000000000000003603 167.0
YHH3_k127_110840_26 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000000000000005643 126.0
YHH3_k127_110840_27 Histidine kinase - - - 0.0000000000000000000000000000001968 128.0
YHH3_k127_110840_28 - - - - 0.0000000000000000000000000000944 119.0
YHH3_k127_110840_29 Pas domain - - - 0.000000000000000000000000003033 129.0
YHH3_k127_110840_3 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 570.0
YHH3_k127_110840_30 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000006913 106.0
YHH3_k127_110840_31 Oxygen tolerance - - - 0.00000000000000000000009991 113.0
YHH3_k127_110840_32 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000009766 86.0
YHH3_k127_110840_34 - - - - 0.0000000000004198 72.0
YHH3_k127_110840_36 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.000000009909 60.0
YHH3_k127_110840_37 IS30 family - - - 0.0002127 46.0
YHH3_k127_110840_4 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007393 481.0
YHH3_k127_110840_5 geranylgeranyl reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 428.0
YHH3_k127_110840_6 associated with various cellular activities K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 408.0
YHH3_k127_110840_7 PAS domain containing protein K07315,K07675 - 2.7.13.3,3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003674 419.0
YHH3_k127_110840_8 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006819 396.0
YHH3_k127_110840_9 Predicted periplasmic lipoprotein (DUF2279) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 326.0
YHH3_k127_11091870_0 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 549.0
YHH3_k127_11091870_1 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000000000000008836 185.0
YHH3_k127_11091870_2 DnaJ-class molecular chaperone - - - 0.00000000000000000000000000000000000002736 154.0
YHH3_k127_11091870_3 - - - - 0.0000000000000000000000000000000000009139 142.0
YHH3_k127_11091870_4 DoxX K15977 - - 0.00000000000000001528 82.0
YHH3_k127_11091870_5 Bacterial regulatory proteins, tetR family - - - 0.00001513 55.0
YHH3_k127_11231625_0 Belongs to the peptidase S16 family - - - 0.0 1224.0
YHH3_k127_11231625_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1043.0
YHH3_k127_11231625_10 GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004339 448.0
YHH3_k127_11231625_11 EamA-like transporter family K15270 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 401.0
YHH3_k127_11231625_12 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 398.0
YHH3_k127_11231625_13 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 373.0
YHH3_k127_11231625_14 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005749 352.0
YHH3_k127_11231625_15 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 349.0
YHH3_k127_11231625_16 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 332.0
YHH3_k127_11231625_17 Deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 293.0
YHH3_k127_11231625_18 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000000000000000000009774 211.0
YHH3_k127_11231625_19 SpoIIAA-like - - - 0.000000000000000000000000000000000000000000000000000000007403 199.0
YHH3_k127_11231625_2 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 5.048e-233 727.0
YHH3_k127_11231625_20 diol metabolic process K01724 - 4.2.1.96 0.000000000000000000000000000000000000000000000000007344 182.0
YHH3_k127_11231625_21 cytochrome - - - 0.0000000000000000000000000000435 120.0
YHH3_k127_11231625_22 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000000000006736 106.0
YHH3_k127_11231625_23 - - - - 0.0000000000000000000000008372 108.0
YHH3_k127_11231625_24 Rhodanese Homology Domain - - - 0.00000000000000000000744 100.0
YHH3_k127_11231625_25 addiction module killer protein - - - 0.00000000000000131 76.0
YHH3_k127_11231625_3 Domain of unknown function (DUF4139) - - - 4.736e-224 703.0
YHH3_k127_11231625_4 Ring hydroxylating alpha subunit (catalytic domain) K00499 - 1.14.15.7 1.556e-219 685.0
YHH3_k127_11231625_5 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 604.0
YHH3_k127_11231625_6 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 571.0
YHH3_k127_11231625_7 Type I GTP cyclohydrolase folE2 K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 472.0
YHH3_k127_11231625_8 Polyprenyl synthetase K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009909 454.0
YHH3_k127_11231625_9 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 443.0
YHH3_k127_11286089_0 Major Facilitator - - - 3.289e-226 706.0
YHH3_k127_11286089_1 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008215 401.0
YHH3_k127_11286089_10 - - - - 0.000000000000000000000000000000000000000000006677 167.0
YHH3_k127_11286089_11 cytochrome - - - 0.000000000000000000000000000000000000000000009763 172.0
YHH3_k127_11286089_12 ornithine cyclodeaminase activity K01750,K16182,K21721,K21949 - 1.5.1.51,2.5.1.140,4.3.1.12 0.0000000000000000000000000000000001059 145.0
YHH3_k127_11286089_13 PFAM cytochrome c class I K08738 - - 0.0000000000000000000000000000008739 124.0
YHH3_k127_11286089_14 Domain of unknown function DUF21 K03699 - - 0.0000000000000001973 80.0
YHH3_k127_11286089_15 Protein conserved in bacteria - - - 0.000001561 59.0
YHH3_k127_11286089_2 coenzyme F390 K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 400.0
YHH3_k127_11286089_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 367.0
YHH3_k127_11286089_4 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004436 274.0
YHH3_k127_11286089_5 Thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000197 246.0
YHH3_k127_11286089_6 cytochrome - - - 0.00000000000000000000000000000000000000000000000000001746 197.0
YHH3_k127_11286089_7 DsrE/DsrF-like family K06039 - - 0.000000000000000000000000000000000000000000000002867 175.0
YHH3_k127_11286089_8 cytochrome - - - 0.000000000000000000000000000000000000000000000004638 184.0
YHH3_k127_11286089_9 cytochrome - - - 0.000000000000000000000000000000000000000000005305 171.0
YHH3_k127_1147281_0 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 590.0
YHH3_k127_1147281_1 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004899 266.0
YHH3_k127_1147281_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008956 242.0
YHH3_k127_1147281_3 Bacterial protein of unknown function (DUF899) K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000381 241.0
YHH3_k127_1147281_4 This gene assignment is based in part on its position within a multicopy insertion sequence directly adjacent to an ORF matching several IS3 family transposases usign a blastp analysis - - - 0.000008278 48.0
YHH3_k127_11504969_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1455.0
YHH3_k127_11504969_1 4Fe-4S ferredoxin iron-sulfur binding domain protein K00533,K18006 - 1.12.1.2,1.12.7.2 0.0 1165.0
YHH3_k127_11504969_10 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 442.0
YHH3_k127_11504969_11 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 428.0
YHH3_k127_11504969_12 LytTr DNA-binding domain K08083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 405.0
YHH3_k127_11504969_13 HemY protein N-terminus K02498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004998 409.0
YHH3_k127_11504969_14 HAD-hyrolase-like K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 396.0
YHH3_k127_11504969_15 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 398.0
YHH3_k127_11504969_16 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 390.0
YHH3_k127_11504969_17 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 369.0
YHH3_k127_11504969_18 lytic transglycosylase activity K08306,K08308,K08309 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009279,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0019867,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031224,GO:0031225,GO:0031975,GO:0033554,GO:0034599,GO:0042221,GO:0042597,GO:0043170,GO:0044425,GO:0044462,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0061783,GO:0070887,GO:0071236,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004549 380.0
YHH3_k127_11504969_19 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009543 362.0
YHH3_k127_11504969_2 PFAM Alpha amylase, catalytic K05341,K05343 - 2.4.1.4,3.2.1.1,5.4.99.16 0.0 1094.0
YHH3_k127_11504969_20 HAD-superfamily hydrolase, subfamily IIB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 358.0
YHH3_k127_11504969_21 HemX, putative uroporphyrinogen-III C-methyltransferase K02496,K13543 - 2.1.1.107,4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006717 361.0
YHH3_k127_11504969_22 PfkB domain protein K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 351.0
YHH3_k127_11504969_23 ABC transporter transmembrane region K06147,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 319.0
YHH3_k127_11504969_24 uroporphyrinogen III synthase K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000007589 244.0
YHH3_k127_11504969_25 MarR family - - - 0.0000000000000000000000000000000000000000000000000000000000003624 215.0
YHH3_k127_11504969_26 Response regulator receiver K03413 - - 0.00000000000000000000000000000000000000000000000014 179.0
YHH3_k127_11504969_27 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000000006809 170.0
YHH3_k127_11504969_28 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000001831 144.0
YHH3_k127_11504969_29 N-acetylmuramoyl-L-alanine amidase - - - 0.000000000000000000000000000000007169 134.0
YHH3_k127_11504969_3 Sucrose synthase K00696 - 2.4.1.14 0.0 1047.0
YHH3_k127_11504969_4 fad dependent oxidoreductase K07137 - - 1.978e-295 912.0
YHH3_k127_11504969_5 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 5.14e-268 831.0
YHH3_k127_11504969_6 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 4.73e-250 777.0
YHH3_k127_11504969_7 Chloride channel - - - 2.493e-211 664.0
YHH3_k127_11504969_8 Oxidoreductase FAD-binding domain protein K00523 - 1.17.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 582.0
YHH3_k127_11504969_9 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 526.0
YHH3_k127_11509086_0 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 389.0
YHH3_k127_11509086_1 CheY binding K03407 GO:0003674,GO:0005488,GO:0005515,GO:0019904 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 325.0
YHH3_k127_11509086_2 CheD chemotactic sensory transduction K03411 - 3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008327 273.0
YHH3_k127_11509086_3 chemotaxis protein K03408 - - 0.00000000000000000000000000000000000000000000000000000000000003502 218.0
YHH3_k127_11598025_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005507 580.0
YHH3_k127_11598025_1 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family K03185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003433 539.0
YHH3_k127_11598025_2 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 291.0
YHH3_k127_11598025_3 PFAM AICARFT IMPCHase bienzyme formylation region K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000001209 235.0
YHH3_k127_11598025_4 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000004498 144.0
YHH3_k127_11598025_5 Bacterial regulatory protein, Fis family K03557 - - 0.0000000000000000000000000000000007238 131.0
YHH3_k127_11616300_0 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004464 342.0
YHH3_k127_11616300_1 SurA N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000139 273.0
YHH3_k127_11616300_2 - - - - 0.0000000000000000000000000000007242 140.0
YHH3_k127_11616300_3 amine dehydrogenase activity K08282,K08884 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009405,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010565,GO:0016020,GO:0016021,GO:0016036,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0030145,GO:0030312,GO:0031224,GO:0031226,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0032091,GO:0033554,GO:0036211,GO:0042304,GO:0042594,GO:0043085,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043393,GO:0043412,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046872,GO:0046890,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051055,GO:0051098,GO:0051100,GO:0051704,GO:0051716,GO:0062012,GO:0062014,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.00000000000000000000000000001689 130.0
YHH3_k127_11668179_0 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress - - - 0.0000000000000000000000000000000000000000000000000003322 189.0
YHH3_k127_11668179_1 MarR family - - - 0.000000000000000000000000000000000000462 146.0
YHH3_k127_11668179_2 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000000000000000598 108.0
YHH3_k127_11743428_0 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005941 508.0
YHH3_k127_11743428_1 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 488.0
YHH3_k127_11743428_10 Protein of unknown function (DUF535) K09824 - - 0.000000000000000000000000000000000000000000001045 177.0
YHH3_k127_11743428_2 glycosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009828 471.0
YHH3_k127_11743428_3 Belongs to the glycosyltransferase 26 family K05946,K13660 - 2.4.1.187 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 383.0
YHH3_k127_11743428_4 PFAM Glycosyl transferase family 2 K07011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007717 358.0
YHH3_k127_11743428_5 Sulfotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 341.0
YHH3_k127_11743428_6 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005694 311.0
YHH3_k127_11743428_7 TupA-like ATPgrasp - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001613 269.0
YHH3_k127_11743428_8 TupA-like ATPgrasp - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001696 267.0
YHH3_k127_11743428_9 PFAM Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001735 254.0
YHH3_k127_11798134_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0 1160.0
YHH3_k127_11798134_1 Cysteine-rich domain - - - 1.206e-311 958.0
YHH3_k127_11798134_10 MoeA C-terminal region (domain IV) K03750,K07219 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 569.0
YHH3_k127_11798134_11 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 433.0
YHH3_k127_11798134_12 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 419.0
YHH3_k127_11798134_13 Nitrate reductase gamma subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 361.0
YHH3_k127_11798134_14 Domain of unknown function (DUF4202) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 340.0
YHH3_k127_11798134_15 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005948 326.0
YHH3_k127_11798134_16 TIGRFAM molybdenum cofactor synthesis K03831 - 2.7.7.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009303 321.0
YHH3_k127_11798134_17 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001257 284.0
YHH3_k127_11798134_18 Cytochrome C1 family K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001941 280.0
YHH3_k127_11798134_19 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001136 277.0
YHH3_k127_11798134_2 Nitrite and sulphite reductase 4Fe-4S domain K11180 - 1.8.99.5 1.052e-261 809.0
YHH3_k127_11798134_20 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal K00411 - 1.10.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006474 266.0
YHH3_k127_11798134_21 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001124 267.0
YHH3_k127_11798134_22 Ankyrin repeats (many copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004972 265.0
YHH3_k127_11798134_23 Molybdopterin guanine dinucleotide synthesis protein B K03753 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002791 249.0
YHH3_k127_11798134_24 DsrE/DsrF-like family K07235 - - 0.000000000000000000000000000000000000000000000000000000000000000001225 229.0
YHH3_k127_11798134_25 MoaC family K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000002368 227.0
YHH3_k127_11798134_26 MobA-like NTP transferase domain K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000000000004329 228.0
YHH3_k127_11798134_27 MoaE protein K03635 - 2.8.1.12 0.0000000000000000000000000000000000000000000000000000000000000002676 223.0
YHH3_k127_11798134_28 DsrC like protein K11179 - - 0.000000000000000000000000000000000000000000000000000000000000001795 218.0
YHH3_k127_11798134_29 DsrE/DsrF-like family K07236 - - 0.00000000000000000000000000000000000000000000000000000000000001623 216.0
YHH3_k127_11798134_3 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 4.983e-260 808.0
YHH3_k127_11798134_30 protein conserved in bacteria K03690 - - 0.00000000000000000000000000000000000000000000000000000000001151 213.0
YHH3_k127_11798134_31 Cas6 Crispr - - - 0.00000000000000000000000000000000000000000000000000000000001555 214.0
YHH3_k127_11798134_32 DsrC like protein K11179 - - 0.00000000000000000000000000000000000000000000000000000000006857 205.0
YHH3_k127_11798134_33 Sulfurtransferase TusA - - - 0.00000000000000000000000000000000000000000000000000000008012 199.0
YHH3_k127_11798134_34 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000003926 201.0
YHH3_k127_11798134_35 Planctomycete cytochrome C - - - 0.0000000000000000000000000000000000000000000000001535 179.0
YHH3_k127_11798134_36 - - - - 0.000000000000000000000000000000000000000000004089 168.0
YHH3_k127_11798134_37 DsrH like protein K07237 - - 0.0000000000000000000000000000000000000000002092 160.0
YHH3_k127_11798134_38 - - - - 0.000000000000000000000000000000000000004844 149.0
YHH3_k127_11798134_39 - - - - 0.000000000000000000000000001119 113.0
YHH3_k127_11798134_4 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 3.277e-250 780.0
YHH3_k127_11798134_40 ThiS family K03636 - - 0.0000000000000000000000004102 106.0
YHH3_k127_11798134_41 PhnA Zinc-Ribbon K06193 - - 0.000000000000000001409 85.0
YHH3_k127_11798134_42 - - - - 0.0000000000000006435 80.0
YHH3_k127_11798134_43 type II secretion system protein E K02454,K02652,K12276 - - 0.00000695 52.0
YHH3_k127_11798134_5 AAA domain K02224 - 6.3.5.11,6.3.5.9 3.582e-249 775.0
YHH3_k127_11798134_6 Nitrite and sulphite reductase 4Fe-4S domain K11181 - 1.8.99.5 2.889e-226 703.0
YHH3_k127_11798134_7 Cytochrome b(N-terminal)/b6/petB K00412 - - 3.746e-226 705.0
YHH3_k127_11798134_8 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 1.623e-203 638.0
YHH3_k127_11798134_9 Polysulphide reductase, NrfD K00185 - - 5.523e-199 625.0
YHH3_k127_11813773_0 PFAM polysaccharide biosynthesis protein CapD - - - 1.002e-299 931.0
YHH3_k127_11813773_1 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K02021,K11085 - - 1.82e-297 922.0
YHH3_k127_11813773_10 Glycosyltransferase Family 4 K02844 - - 0.000000000000000000000000000000000000000000000000000000000000000000001053 252.0
YHH3_k127_11813773_11 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001534 241.0
YHH3_k127_11813773_12 - - - - 0.000000000000000000000000006118 112.0
YHH3_k127_11813773_13 peptidyl-tyrosine sulfation K20444 - - 0.0000000000000000000000001401 115.0
YHH3_k127_11813773_14 Glycosyl transferase, family 2 K07011,K13005 - 2.4.1.60 0.000000000000000000000007222 113.0
YHH3_k127_11813773_15 Glycosyltransferase family 10 (fucosyltransferase) C-term - - - 0.000000000000000001326 98.0
YHH3_k127_11813773_16 Glycosyl transferase family 11 - - - 0.000001771 59.0
YHH3_k127_11813773_2 DegT/DnrJ/EryC1/StrS aminotransferase family K12452 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 598.0
YHH3_k127_11813773_3 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 541.0
YHH3_k127_11813773_4 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 520.0
YHH3_k127_11813773_5 PFAM Glycosyl transferase, family 4, conserved region K13007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 483.0
YHH3_k127_11813773_6 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 469.0
YHH3_k127_11813773_7 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006607 419.0
YHH3_k127_11813773_8 Glycosyltransferase family 9 (heptosyltransferase) K02841 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 381.0
YHH3_k127_11813773_9 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003095 372.0
YHH3_k127_11904192_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 9.917e-271 841.0
YHH3_k127_11904192_1 PFAM major facilitator superfamily MFS_1 - - - 1.335e-221 692.0
YHH3_k127_11904192_10 Ribosomal protein L31 K02909 - - 0.000000000000000000000000000000002203 129.0
YHH3_k127_11904192_11 This gene assignment is based in part on its position within a multicopy insertion sequence directly adjacent to an ORF matching several IS3 family transposases usign a blastp analysis - - - 0.000008278 48.0
YHH3_k127_11904192_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 3.926e-203 635.0
YHH3_k127_11904192_3 Polyprenyl synthetase K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005652 546.0
YHH3_k127_11904192_4 Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 473.0
YHH3_k127_11904192_5 Molybdenum Cofactor Synthesis C K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004026 434.0
YHH3_k127_11904192_6 Phospholipase A1 K01058 - 3.1.1.32,3.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006261 399.0
YHH3_k127_11904192_7 Bacterial-like globin K06886 - - 0.0000000000000000000000000000000000000000000000000000000000004403 212.0
YHH3_k127_11904192_8 - - - - 0.00000000000000000000000000000000000000000000000000000009398 197.0
YHH3_k127_11904192_9 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000000006604 137.0
YHH3_k127_11988585_0 DNA polymerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 603.0
YHH3_k127_11988585_1 Bacterial capsule synthesis protein PGA_cap - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 295.0
YHH3_k127_11988585_2 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000004623 224.0
YHH3_k127_11988585_3 Reverse transcriptase (RNA-dependent DNA polymerase) - - - 0.0000000000159 68.0
YHH3_k127_11999081_0 O-Antigen ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 514.0
YHH3_k127_12029316_0 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 304.0
YHH3_k127_12029316_1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001379 262.0
YHH3_k127_12029316_2 MgsA AAA+ ATPase C terminal K07478 - - 0.00000000000000000000000000008688 116.0
YHH3_k127_12073647_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1695.0
YHH3_k127_12073647_1 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 437.0
YHH3_k127_12073647_2 Ribosomal protein L17 K02879 - - 0.0000000000000000000000000000000005248 131.0
YHH3_k127_12078031_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1270.0
YHH3_k127_12078031_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 1.376e-243 758.0
YHH3_k127_12078031_10 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000641 392.0
YHH3_k127_12078031_11 asparagine K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000943 371.0
YHH3_k127_12078031_12 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005759 295.0
YHH3_k127_12078031_13 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000001171 284.0
YHH3_k127_12078031_14 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000000000000000000006958 229.0
YHH3_k127_12078031_15 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000000000000000000000000000000002597 219.0
YHH3_k127_12078031_16 PFAM Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K00567 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000001605 213.0
YHH3_k127_12078031_17 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000000000000000000000000001473 205.0
YHH3_k127_12078031_18 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000000000000000000000000000000001532 145.0
YHH3_k127_12078031_2 associated with various cellular activities - - - 1.611e-209 654.0
YHH3_k127_12078031_3 Putative metallopeptidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 594.0
YHH3_k127_12078031_4 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008357 554.0
YHH3_k127_12078031_5 Phage integrase, N-terminal SAM-like domain K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 494.0
YHH3_k127_12078031_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007454 488.0
YHH3_k127_12078031_7 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006481 453.0
YHH3_k127_12078031_8 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 405.0
YHH3_k127_12078031_9 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 396.0
YHH3_k127_12123417_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1518.0
YHH3_k127_12123417_1 B3/4 domain K01890 - 6.1.1.20 0.0 1239.0
YHH3_k127_12123417_10 Uncharacterized protein conserved in bacteria (DUF2331) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 511.0
YHH3_k127_12123417_11 Riboflavin kinase K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003634 479.0
YHH3_k127_12123417_12 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 466.0
YHH3_k127_12123417_13 Conserved hypothetical protein 698 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 406.0
YHH3_k127_12123417_14 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 394.0
YHH3_k127_12123417_15 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005361 361.0
YHH3_k127_12123417_16 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 342.0
YHH3_k127_12123417_17 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 293.0
YHH3_k127_12123417_18 Type II secretion system (T2SS), protein G K02456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000209 246.0
YHH3_k127_12123417_19 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000000000000000000000009767 205.0
YHH3_k127_12123417_2 Threonyl and Alanyl tRNA synthetase second additional domain K01868 - 6.1.1.3 0.0 1136.0
YHH3_k127_12123417_20 pathogenesis - - - 0.0000000000000000000000000000000000000000000000000005518 187.0
YHH3_k127_12123417_21 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000000000000000000000001422 186.0
YHH3_k127_12123417_22 Type II transport protein GspH K02457 - - 0.0000000000000000000000000000000000000000000000002069 181.0
YHH3_k127_12123417_23 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000002092 181.0
YHH3_k127_12123417_24 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000000000000001058 165.0
YHH3_k127_12123417_25 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000000000000000000008056 110.0
YHH3_k127_12123417_26 Type II secretion system (T2SS), protein I K02458 - - 0.000000000000000000000008626 102.0
YHH3_k127_12123417_27 - - - - 0.00000004651 57.0
YHH3_k127_12123417_28 response to stress - - - 0.0000002885 58.0
YHH3_k127_12123417_29 Mu-like prophage protein gp29 - - - 0.000001412 49.0
YHH3_k127_12123417_3 MacB-like periplasmic core domain K02004 - - 7.493e-213 666.0
YHH3_k127_12123417_31 pathogenesis - - - 0.0003485 46.0
YHH3_k127_12123417_4 MacB-like periplasmic core domain K02004 - - 1.044e-209 656.0
YHH3_k127_12123417_5 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 6.54e-204 636.0
YHH3_k127_12123417_6 PFAM sodium calcium exchanger membrane region K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 599.0
YHH3_k127_12123417_7 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 529.0
YHH3_k127_12123417_8 cation diffusion facilitator family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002617 527.0
YHH3_k127_12123417_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 521.0
YHH3_k127_12314839_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1088.0
YHH3_k127_12314839_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 5.764e-289 895.0
YHH3_k127_12314839_10 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 312.0
YHH3_k127_12314839_11 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 298.0
YHH3_k127_12314839_12 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008859 262.0
YHH3_k127_12314839_13 PFAM Anti sigma-E protein RseA family protein K03597 - - 0.000000000000000000000000000000000000000000000000000004299 195.0
YHH3_k127_12314839_14 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000000009007 164.0
YHH3_k127_12314839_15 PFAM Positive regulator of sigma(E) RseC MucC K03803 - - 0.00000000000000000000000000000000003764 140.0
YHH3_k127_12314839_16 Domain of unknown function (DUF4845) - - - 0.000000000000000000000000000000007266 132.0
YHH3_k127_12314839_17 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000001089 74.0
YHH3_k127_12314839_2 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 6.072e-286 883.0
YHH3_k127_12314839_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 8.046e-231 725.0
YHH3_k127_12314839_4 PFAM peptidase S1 and S6 chymotrypsin Hap K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007602 613.0
YHH3_k127_12314839_5 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003506 468.0
YHH3_k127_12314839_6 PFAM Peptidase S24 S26A S26B, conserved region K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 435.0
YHH3_k127_12314839_7 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005444 431.0
YHH3_k127_12314839_8 MucB/RseB C-terminal domain K03598 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007338 376.0
YHH3_k127_12314839_9 TIGRFAM RNA polymerase sigma factor RpoE K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005561 348.0
YHH3_k127_12374867_0 Citrate transporter - - - 1.19e-262 823.0
YHH3_k127_12374867_1 Predicted membrane protein (DUF2157) - - - 1.641e-199 627.0
YHH3_k127_12374867_10 - - - - 0.000000000000000000000000000000000000578 145.0
YHH3_k127_12374867_11 Chlorophyllase - - - 0.0000000000000000000000000000007912 123.0
YHH3_k127_12374867_12 Protein of unknown function (DUF504) - - - 0.0000000000000000000000009092 105.0
YHH3_k127_12374867_13 Uncharacterized protein family, UPF0114 - - - 0.00000000000000007213 83.0
YHH3_k127_12374867_14 Outer membrane protein beta-barrel domain - - - 0.00000837 55.0
YHH3_k127_12374867_2 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008085 446.0
YHH3_k127_12374867_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006177 328.0
YHH3_k127_12374867_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007429 324.0
YHH3_k127_12374867_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 315.0
YHH3_k127_12374867_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000393 243.0
YHH3_k127_12374867_7 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006 244.0
YHH3_k127_12374867_8 KTSC domain - - - 0.000000000000000000000000000000000000000003057 156.0
YHH3_k127_12374867_9 Protein of unknown function (DUF2652) - - - 0.0000000000000000000000000000000000001513 151.0
YHH3_k127_12402361_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 329.0
YHH3_k127_12402361_2 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000001403 237.0
YHH3_k127_12484774_0 Cation transport ATPase (P-type) K01537 - 3.6.3.8 0.0 1121.0
YHH3_k127_12484774_1 Arginyl tRNA synthetase N terminal dom K01887 - 6.1.1.19 0.0 998.0
YHH3_k127_12484774_10 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 2.417e-207 650.0
YHH3_k127_12484774_11 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 5.474e-206 643.0
YHH3_k127_12484774_12 L COG2826 Transposase and inactivated derivatives, IS30 family K07482 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004803,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006310,GO:0006313,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0030983,GO:0032135,GO:0032196,GO:0032991,GO:0032993,GO:0034641,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 587.0
YHH3_k127_12484774_13 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003888 584.0
YHH3_k127_12484774_14 NYN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 493.0
YHH3_k127_12484774_15 Transcriptional regulator, LysR family K04761 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 485.0
YHH3_k127_12484774_16 Phage integrase, N-terminal SAM-like domain K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 462.0
YHH3_k127_12484774_17 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 477.0
YHH3_k127_12484774_18 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 426.0
YHH3_k127_12484774_19 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 400.0
YHH3_k127_12484774_2 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 1.783e-308 955.0
YHH3_k127_12484774_20 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 372.0
YHH3_k127_12484774_21 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009093 359.0
YHH3_k127_12484774_22 Protein of unknown function, DUF484 K09921 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007043 323.0
YHH3_k127_12484774_23 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 316.0
YHH3_k127_12484774_24 TIGRFAM DNA-3-methyladenine glycosylase I K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 306.0
YHH3_k127_12484774_25 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001316 280.0
YHH3_k127_12484774_26 Protein of unknown function (DUF3501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001853 266.0
YHH3_k127_12484774_27 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002496 259.0
YHH3_k127_12484774_28 rod shape-determining protein MreD K03571 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001889 252.0
YHH3_k127_12484774_29 DSBA-like thioredoxin domain K03673 - - 0.000000000000000000000000000000000000000000000000000000000000000000002359 241.0
YHH3_k127_12484774_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 2.366e-277 857.0
YHH3_k127_12484774_30 HD domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000003458 214.0
YHH3_k127_12484774_31 SMART CoA-binding domain protein K06929 - - 0.0000000000000000000000000000000000000000000000000000000003262 207.0
YHH3_k127_12484774_32 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - - - 0.0000000000000000000000000000000000000000000000000472 183.0
YHH3_k127_12484774_33 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000007862 181.0
YHH3_k127_12484774_34 Evidence 4 Homologs of previously reported genes of K09700 - - 0.0000000000000000000000000000000000000000000000008786 175.0
YHH3_k127_12484774_35 Sporulation related domain - - - 0.000000000000000000000000000000000000000000002747 170.0
YHH3_k127_12484774_36 - - - - 0.0000000000000000000000000000000000000002253 152.0
YHH3_k127_12484774_37 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000003764 150.0
YHH3_k127_12484774_38 Pfam Sodium hydrogen exchanger K03316 - - 0.00000000000000000000000000000000000000372 149.0
YHH3_k127_12484774_39 Protein of unknown function (DUF2442) - - - 0.0000000000000000000000000000000001276 134.0
YHH3_k127_12484774_4 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 9.609e-268 829.0
YHH3_k127_12484774_40 - - - - 0.000000000000761 73.0
YHH3_k127_12484774_5 Cysteine-rich domain - - - 3.718e-239 744.0
YHH3_k127_12484774_6 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 6.09e-233 744.0
YHH3_k127_12484774_7 Soluble lytic murein transglycosylase L domain K08309 - - 4.904e-228 724.0
YHH3_k127_12484774_8 PFAM FAD linked oxidase domain protein K00102 - 1.1.2.4 2.783e-222 699.0
YHH3_k127_12484774_9 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 5.844e-216 678.0
YHH3_k127_12523136_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281 - 1.4.4.2 0.0 1626.0
YHH3_k127_12523136_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1463.0
YHH3_k127_12523136_10 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 6.451e-240 747.0
YHH3_k127_12523136_11 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 3.731e-235 729.0
YHH3_k127_12523136_12 The glycine cleavage system catalyzes the degradation of glycine K00605 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.1.2.10 5.99e-200 626.0
YHH3_k127_12523136_13 Phosphoribulokinase / Uridine kinase family K00855 - 2.7.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 527.0
YHH3_k127_12523136_14 Bacterial lipid A biosynthesis acyltransferase K02517,K12974 - 2.3.1.241,2.3.1.242 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 506.0
YHH3_k127_12523136_15 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007305 491.0
YHH3_k127_12523136_16 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 471.0
YHH3_k127_12523136_17 Ribosomal protein L11 methyltransferase (PrmA) K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008252 473.0
YHH3_k127_12523136_18 Methylenetetrahydrofolate reductase K00297 GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 462.0
YHH3_k127_12523136_19 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 418.0
YHH3_k127_12523136_2 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1273.0
YHH3_k127_12523136_20 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 386.0
YHH3_k127_12523136_21 Sigma factor PP2C-like phosphatases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 392.0
YHH3_k127_12523136_22 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 361.0
YHH3_k127_12523136_23 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 314.0
YHH3_k127_12523136_24 Protein of unknown function (DUF3426) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009281 254.0
YHH3_k127_12523136_25 OsmC-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004607 246.0
YHH3_k127_12523136_26 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000000000000000005583 233.0
YHH3_k127_12523136_27 Domain of unknown function (DUF386) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000775 235.0
YHH3_k127_12523136_28 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000000000000000000000000795 220.0
YHH3_k127_12523136_29 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000000000000000000004141 213.0
YHH3_k127_12523136_3 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.0 1206.0
YHH3_k127_12523136_30 - - - - 0.000000000000000000000000000000000000000000000000000000001129 210.0
YHH3_k127_12523136_31 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.00000000000000000000000000000000000000000000000000003853 190.0
YHH3_k127_12523136_32 Sporulation related domain - - - 0.0000000000000000000000000000000000000000000000000000673 198.0
YHH3_k127_12523136_33 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.0000000000000000000000000000000000000000000000000003956 189.0
YHH3_k127_12523136_34 Protein of unknown function (DUF2782) - - - 0.000000000000000000000000000000000000000002698 157.0
YHH3_k127_12523136_35 PFAM CutA1 divalent ion tolerance protein K03926 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914 - 0.00000000000000000000000000000000000000002605 155.0
YHH3_k127_12523136_36 - - - - 0.0000000000000000000000000000000000001507 144.0
YHH3_k127_12523136_37 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000000000000000000000000000002964 143.0
YHH3_k127_12523136_38 TfoX N-terminal domain - - - 0.000000000000000000000000009989 113.0
YHH3_k127_12523136_39 - - - - 0.00000000000000000000007097 102.0
YHH3_k127_12523136_4 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0 1037.0
YHH3_k127_12523136_41 STAS domain - - - 0.000000000000006421 78.0
YHH3_k127_12523136_42 Methyltransferase domain - - - 0.0000008305 58.0
YHH3_k127_12523136_5 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 1.147e-305 938.0
YHH3_k127_12523136_6 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 2.747e-281 867.0
YHH3_k127_12523136_7 PFAM Carbamoyl-phosphate synthase L chain ATP-binding K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 1.389e-276 853.0
YHH3_k127_12523136_8 Peptidase family U32 C-terminal domain K08303 - - 2.328e-271 839.0
YHH3_k127_12523136_9 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 3.409e-261 818.0
YHH3_k127_12535679_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0 1193.0
YHH3_k127_12535679_1 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 580.0
YHH3_k127_12535679_10 The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters K02170 - 3.1.1.85 0.00000000000000000000000000000000000000000000000000000000001459 215.0
YHH3_k127_12535679_11 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000000000000000000000000000000001566 194.0
YHH3_k127_12535679_12 - - - - 0.00000000000000000000000000000000000000001251 155.0
YHH3_k127_12535679_13 Protein of unknown function (DUF433) - - - 0.00000000000000000000000000000007862 126.0
YHH3_k127_12535679_14 TIGRFAM Gliding motility-associated protein, GldC - - - 0.0000000000000000000000000000006647 125.0
YHH3_k127_12535679_15 IS30 family K07482 - - 0.00001035 48.0
YHH3_k127_12535679_2 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 582.0
YHH3_k127_12535679_3 transferase activity, transferring acyl groups other than amino-acyl groups K01897,K03466,K18687 - 6.2.1.3,6.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 587.0
YHH3_k127_12535679_4 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008432 494.0
YHH3_k127_12535679_5 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 485.0
YHH3_k127_12535679_6 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 311.0
YHH3_k127_12535679_7 PFAM Phosphoribosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 294.0
YHH3_k127_12535679_8 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001126 277.0
YHH3_k127_12535679_9 PFAM electron transport protein SCO1 SenC K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000002088 229.0
YHH3_k127_12543138_0 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 469.0
YHH3_k127_12543138_1 Belongs to the BI1 family K19416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009872 337.0
YHH3_k127_12543138_2 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.0000000000000000000000000000000002251 135.0
YHH3_k127_12543138_3 LysR substrate binding domain K03717 - - 0.000000000000000000000007941 101.0
YHH3_k127_12543138_4 Integral membrane protein TerC family - - - 0.00000000000000000009325 89.0
YHH3_k127_12564550_0 transposase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003418 460.0
YHH3_k127_12609139_0 pfkB family carbohydrate kinase K00852,K00856 - 2.7.1.15,2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005868 509.0
YHH3_k127_12609139_1 BNR repeat-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008782 468.0
YHH3_k127_12609139_2 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 439.0
YHH3_k127_12609139_3 Fructosamine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005432 417.0
YHH3_k127_12609139_4 response to heat K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000119 273.0
YHH3_k127_12609139_5 Universal stress protein family K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001315 261.0
YHH3_k127_12609139_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003904 252.0
YHH3_k127_12609139_7 - - - - 0.000000000000000000000000000000000001676 145.0
YHH3_k127_12609139_8 - - - - 0.00000000000000178 78.0
YHH3_k127_12817235_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 3.75e-321 986.0
YHH3_k127_12817235_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 1.031e-227 712.0
YHH3_k127_12817235_2 Nitronate monooxygenase K00459 - 1.13.12.16 7.618e-225 701.0
YHH3_k127_12817235_3 PFAM TonB-dependent receptor plug K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 491.0
YHH3_k127_12817235_4 PAS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004432 392.0
YHH3_k127_12817235_5 transport system periplasmic component K01989 - - 0.00000000000000000000000000000000000000000000000000000002866 208.0
YHH3_k127_12817235_6 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000000001994 160.0
YHH3_k127_12817235_7 - - - - 0.0000003789 51.0
YHH3_k127_12882067_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000103 264.0
YHH3_k127_12882067_1 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005349 262.0
YHH3_k127_12882067_2 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000000000000000000000009503 171.0
YHH3_k127_12882067_3 TPR repeat - - - 0.000000000000287 75.0
YHH3_k127_134773_0 Penicillin-binding protein OB-like domain K05366 - 2.4.1.129,3.4.16.4 3.518e-259 808.0
YHH3_k127_134773_1 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 599.0
YHH3_k127_1384165_0 Ceramidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006008 268.0
YHH3_k127_1384165_1 SMART RNA-binding S4 domain protein K04762 - - 0.0000000000000000000000000000000000001366 145.0
YHH3_k127_1384165_2 Protein of unknown function (DUF465) K09794 - - 0.000000000000000000000000000000002968 129.0
YHH3_k127_1384165_3 Hydrolase K21471 - - 0.00000000000000000000000000002343 125.0
YHH3_k127_1397_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 3.487e-320 987.0
YHH3_k127_1397_1 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 3.224e-305 945.0
YHH3_k127_1397_10 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 503.0
YHH3_k127_1397_11 Glycosyltransferase WbsX - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 481.0
YHH3_k127_1397_12 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 469.0
YHH3_k127_1397_13 metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 418.0
YHH3_k127_1397_14 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 414.0
YHH3_k127_1397_15 Domain of unknown function (DUF1972) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 414.0
YHH3_k127_1397_16 PFAM filamentation induced by cAMP protein Fic - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007896 404.0
YHH3_k127_1397_17 Haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 349.0
YHH3_k127_1397_18 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 327.0
YHH3_k127_1397_19 SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006437 321.0
YHH3_k127_1397_2 phosphate transport system permease K02038 - - 1.95e-248 785.0
YHH3_k127_1397_20 Inositol monophosphatase family K01082 - 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006148 301.0
YHH3_k127_1397_21 SMART Protein-tyrosine phosphatase, low molecular weight K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 293.0
YHH3_k127_1397_22 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001694 266.0
YHH3_k127_1397_23 Involved in cell wall biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000007625 242.0
YHH3_k127_1397_24 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000001014 233.0
YHH3_k127_1397_25 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000002274 200.0
YHH3_k127_1397_26 Acetyltransferase (Isoleucine patch superfamily) K18234 - - 0.0000000000000000000000000000000000000000000000002891 184.0
YHH3_k127_1397_27 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.00000000000000000000000000000000000000000002017 163.0
YHH3_k127_1397_28 Membrane protein implicated in regulation of membrane protease activity - - - 0.000000000000000000000000000000000000000007998 158.0
YHH3_k127_1397_29 carboxylic ester hydrolase activity - - - 0.00000000000000000000000000000000000000005524 160.0
YHH3_k127_1397_3 PFAM binding-protein-dependent transport systems inner membrane component K02037 - - 2.381e-245 779.0
YHH3_k127_1397_30 - - - - 0.000000000000000000000000000000000000006257 153.0
YHH3_k127_1397_31 Preprotein translocase subunit K03210 - - 0.00000000000000000000000000000000000001621 146.0
YHH3_k127_1397_33 Sulfotransferase domain - - - 0.0000000000000000002986 98.0
YHH3_k127_1397_34 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. - - - 0.0000000000000003741 88.0
YHH3_k127_1397_35 - - - - 0.0000000000007908 73.0
YHH3_k127_1397_36 FecR protein - - - 0.0000007289 60.0
YHH3_k127_1397_4 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 2.243e-206 645.0
YHH3_k127_1397_5 Exopolysaccharide biosynthesis protein YbjH - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005489 621.0
YHH3_k127_1397_6 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 553.0
YHH3_k127_1397_7 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 538.0
YHH3_k127_1397_8 SMART band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 520.0
YHH3_k127_1397_9 SBF-like CPA transporter family (DUF4137) K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049 510.0
YHH3_k127_1577169_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1155.0
YHH3_k127_1577169_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1148.0
YHH3_k127_1577169_10 Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD( ) and coenzyme A. Is the final enzyme in the meta- cleavage pathway for the degradation of aromatic compounds K04073 - 1.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007325 411.0
YHH3_k127_1577169_11 Ribosomal RNA adenine dimethylase K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004345 345.0
YHH3_k127_1577169_12 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 299.0
YHH3_k127_1577169_13 GDP-mannose 4,6 dehydratase K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004762 289.0
YHH3_k127_1577169_14 Nucleotidyl transferase K00978 - 2.7.7.33 0.000000000000000000000000000000000000000000000000000000000000000000000000002568 260.0
YHH3_k127_1577169_15 Membrane K08978 - - 0.00000000000000000000000000000000000000000000000000000000000000003994 225.0
YHH3_k127_1577169_16 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000000000000000000000000002509 219.0
YHH3_k127_1577169_17 Phosphoglycerate mutase family K08296 - - 0.0000000000000000000000000000000000000000000000000000003892 196.0
YHH3_k127_1577169_18 Winged helix-turn-helix DNA-binding - - - 0.000000000000000000000000000000000000000000000000001638 184.0
YHH3_k127_1577169_2 Belongs to the DegT DnrJ EryC1 family K12452 - 1.17.1.1 7.416e-266 822.0
YHH3_k127_1577169_20 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000000000000000000000000000000000000078 166.0
YHH3_k127_1577169_21 Cupredoxin-like domain - - - 0.0000000000000000000000000000000000000007011 151.0
YHH3_k127_1577169_22 Protein of unknown function (DUF2288) - - - 0.0000000000000000000000000000001428 126.0
YHH3_k127_1577169_23 - - - - 0.000000000000000000003398 97.0
YHH3_k127_1577169_3 Polyphosphate kinase 2 (PPK2) - - - 5.535e-248 773.0
YHH3_k127_1577169_4 CDP-glucose 4,6-dehydratase K01709 - 4.2.1.45 2.503e-197 619.0
YHH3_k127_1577169_5 TIGRFAM type I secretion outer membrane protein, TolC family K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 598.0
YHH3_k127_1577169_6 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 575.0
YHH3_k127_1577169_7 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 456.0
YHH3_k127_1577169_8 HMGL-like K01666 - 4.1.3.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 447.0
YHH3_k127_1577169_9 PFAM iron permease FTR1 K07243 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004191 420.0
YHH3_k127_1751056_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1680.0
YHH3_k127_1751056_1 General secretory system II protein E domain protein K02454,K02652,K12276 - - 0.0 1309.0
YHH3_k127_1751056_10 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 7.666e-200 624.0
YHH3_k127_1751056_11 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 557.0
YHH3_k127_1751056_12 PFAM permease YjgP YjgQ family protein K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006835 526.0
YHH3_k127_1751056_13 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 511.0
YHH3_k127_1751056_14 PFAM permease YjgP YjgQ family protein K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008596 504.0
YHH3_k127_1751056_15 Transport permease protein K09690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 483.0
YHH3_k127_1751056_16 ABC-type polysaccharide polyol phosphate transport system ATPase component K01990,K09691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006046 461.0
YHH3_k127_1751056_17 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003223 453.0
YHH3_k127_1751056_18 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 421.0
YHH3_k127_1751056_19 SMART beta-lactamase domain protein K01120 - 3.1.4.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000421 406.0
YHH3_k127_1751056_2 serine threonine protein kinase K12132 - 2.7.11.1 0.0 1284.0
YHH3_k127_1751056_20 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003853 395.0
YHH3_k127_1751056_21 Integral membrane protein TerC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007787 380.0
YHH3_k127_1751056_22 Pfam Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 377.0
YHH3_k127_1751056_23 cyclopropane-fatty-acyl-phospholipid synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004438 355.0
YHH3_k127_1751056_24 beta-fructofuranosidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007006 344.0
YHH3_k127_1751056_25 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 314.0
YHH3_k127_1751056_26 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 317.0
YHH3_k127_1751056_27 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008885 305.0
YHH3_k127_1751056_28 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005301 273.0
YHH3_k127_1751056_29 ACT domain K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000005223 243.0
YHH3_k127_1751056_3 PFAM thiamine pyrophosphate K01652 - 2.2.1.6 0.0 1030.0
YHH3_k127_1751056_30 Pfam Glycosyl transferase family 2 K12990 - - 0.000000000000000000000000000000000000000000000000000000000000000001205 237.0
YHH3_k127_1751056_31 WxcM-like, C-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000004289 221.0
YHH3_k127_1751056_32 PFAM DNA polymerase III chi subunit HolC K02339 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000009355 213.0
YHH3_k127_1751056_33 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000001207 206.0
YHH3_k127_1751056_34 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000002427 203.0
YHH3_k127_1751056_35 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000005236 159.0
YHH3_k127_1751056_36 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000144 172.0
YHH3_k127_1751056_37 Glycosyltransferase group 2 family protein - - - 0.0000000000000000000000000000000000001869 154.0
YHH3_k127_1751056_38 Virulence factor membrane-bound polymerase, C-terminal - - - 0.0000000000000000000000000000005088 125.0
YHH3_k127_1751056_4 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 5.143e-313 974.0
YHH3_k127_1751056_40 Belongs to the N-Me-Phe pilin family K02650 - - 0.00000000000000000000905 99.0
YHH3_k127_1751056_41 Protein of unknown function (DUF3106) - - - 0.00000000000000000001529 96.0
YHH3_k127_1751056_43 Protein of unknown function (DUF563) - - - 0.00000569 59.0
YHH3_k127_1751056_44 IS30 family K07482 - - 0.00001035 48.0
YHH3_k127_1751056_5 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 3.233e-290 896.0
YHH3_k127_1751056_6 metal-dependent phosphohydrolase HD sub domain - - - 4.458e-255 796.0
YHH3_k127_1751056_7 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 1.667e-249 777.0
YHH3_k127_1751056_8 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474 - - 1.846e-203 640.0
YHH3_k127_1751056_9 Peptidase family M48 - - - 4.141e-201 637.0
YHH3_k127_1791329_0 - - - - 0.00000000000000000000000000000000000125 148.0
YHH3_k127_1791329_3 Pfam Transposase - - - 0.0004317 43.0
YHH3_k127_17914_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 383.0
YHH3_k127_17914_1 general secretion pathway protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000005543 239.0
YHH3_k127_17914_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000001199 161.0
YHH3_k127_1792568_0 copper-translocating P-type ATPase K17686 - 3.6.3.54 2.15e-305 955.0
YHH3_k127_1792568_1 COG0457 FOG TPR repeat - - - 6e-276 880.0
YHH3_k127_1792568_10 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 514.0
YHH3_k127_1792568_11 Rhodanese Homology Domain K06917 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 508.0
YHH3_k127_1792568_12 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 464.0
YHH3_k127_1792568_13 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005759 437.0
YHH3_k127_1792568_14 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 426.0
YHH3_k127_1792568_15 Squalene synthase HpnD K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004018 388.0
YHH3_k127_1792568_16 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 387.0
YHH3_k127_1792568_17 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009487 384.0
YHH3_k127_1792568_18 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 392.0
YHH3_k127_1792568_19 Domain of unknown function (DUF4382) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 366.0
YHH3_k127_1792568_2 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 9.874e-219 683.0
YHH3_k127_1792568_20 TIGRFAM heavy metal efflux pump, CzcA family K07787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 328.0
YHH3_k127_1792568_21 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007112 328.0
YHH3_k127_1792568_22 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001607 286.0
YHH3_k127_1792568_23 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000003123 218.0
YHH3_k127_1792568_24 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000001609 196.0
YHH3_k127_1792568_25 TIGRFAM outer membrane autotransporter barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000005255 199.0
YHH3_k127_1792568_26 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000004183 182.0
YHH3_k127_1792568_27 Phage derived protein Gp49-like (DUF891) - - - 0.0000000000000000000000000000000000000000000000003327 179.0
YHH3_k127_1792568_28 Belongs to the ArsC family - - - 0.0000000000000000000000000000000000000000001569 161.0
YHH3_k127_1792568_29 Helix-turn-helix domain - - - 0.00000000000000000000000000000000000000001696 154.0
YHH3_k127_1792568_3 PFAM deoxyribose-phosphate aldolase phospho-2-dehydro-3-deoxyheptonate aldolase K11645 - 4.1.2.13 1.365e-214 668.0
YHH3_k127_1792568_30 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000124 158.0
YHH3_k127_1792568_31 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000000000001571 149.0
YHH3_k127_1792568_32 - - - - 0.0000000000000000000000000000000003116 138.0
YHH3_k127_1792568_33 COG0642 Signal transduction histidine kinase - - - 0.000000000000000000000000000000002725 139.0
YHH3_k127_1792568_34 biopolymer transport protein - - - 0.00000000000000000000000000000004382 130.0
YHH3_k127_1792568_35 - - - - 0.000000000000000003776 89.0
YHH3_k127_1792568_36 - - - - 0.000000000000000115 82.0
YHH3_k127_1792568_37 Copper resistance protein B precursor (CopB) - - - 0.00000000000005641 71.0
YHH3_k127_1792568_4 PFAM aminotransferase class I and II K14267 - 2.6.1.17 4.773e-213 666.0
YHH3_k127_1792568_5 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 2.545e-208 652.0
YHH3_k127_1792568_6 Flavin containing amine oxidoreductase K21677 - 1.17.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 590.0
YHH3_k127_1792568_7 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 566.0
YHH3_k127_1792568_8 PFAM type II secretion system protein E K02670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 548.0
YHH3_k127_1792568_9 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009014 532.0
YHH3_k127_1795043_0 Nacht domain - - - 0.0 1955.0
YHH3_k127_1795043_1 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.0 1427.0
YHH3_k127_1795043_10 37-kD nucleoid-associated bacterial protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003029 419.0
YHH3_k127_1795043_11 Region found in RelA / SpoT proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000512 414.0
YHH3_k127_1795043_12 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 400.0
YHH3_k127_1795043_13 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 403.0
YHH3_k127_1795043_14 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 384.0
YHH3_k127_1795043_15 PFAM Type I restriction modification DNA specificity domain K01154 - 3.1.21.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 370.0
YHH3_k127_1795043_16 Type IV secretory system Conjugative DNA transfer - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008567 353.0
YHH3_k127_1795043_17 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000911 310.0
YHH3_k127_1795043_18 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001596 280.0
YHH3_k127_1795043_19 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000000000000000000000000000000000000000000006592 224.0
YHH3_k127_1795043_2 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 0.0 1257.0
YHH3_k127_1795043_20 PFAM Sporulation domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000003628 223.0
YHH3_k127_1795043_21 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K01947,K03525 - 2.7.1.33,6.3.4.15 0.000000000000000000000000000000000000000000000000000000000003703 217.0
YHH3_k127_1795043_22 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000002445 190.0
YHH3_k127_1795043_23 RadC-like JAB domain K03630 - - 0.000000000000000000000000000000000000000000000000005005 190.0
YHH3_k127_1795043_24 Protein of unknown function (DUF3037) - - - 0.0000000000000000000000000000000000003683 150.0
YHH3_k127_1795043_25 - - - - 0.00000000000000000000000000002778 126.0
YHH3_k127_1795043_26 - - - - 0.00000000000000000000005004 100.0
YHH3_k127_1795043_27 Transcriptional regulator K07733 - - 0.00000000000000002059 84.0
YHH3_k127_1795043_28 - - - - 0.00000000003265 66.0
YHH3_k127_1795043_3 DNA methylase K03427 - 2.1.1.72 8.427e-291 899.0
YHH3_k127_1795043_4 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 2.039e-228 715.0
YHH3_k127_1795043_5 Membrane - - - 6.241e-208 653.0
YHH3_k127_1795043_6 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004011 499.0
YHH3_k127_1795043_7 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 484.0
YHH3_k127_1795043_8 Transporter associated domain K06189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 444.0
YHH3_k127_1795043_9 S4 RNA-binding domain K06182 - 5.4.99.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 431.0
YHH3_k127_1860371_0 NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 0.0 1152.0
YHH3_k127_1860371_1 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.0 1067.0
YHH3_k127_1860371_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 583.0
YHH3_k127_1860371_11 DAHP synthetase I family K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004622 495.0
YHH3_k127_1860371_12 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 473.0
YHH3_k127_1860371_13 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006784 412.0
YHH3_k127_1860371_14 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 391.0
YHH3_k127_1860371_15 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 353.0
YHH3_k127_1860371_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 322.0
YHH3_k127_1860371_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003858 307.0
YHH3_k127_1860371_18 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006881 292.0
YHH3_k127_1860371_19 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 280.0
YHH3_k127_1860371_2 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 1e-323 995.0
YHH3_k127_1860371_20 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004264 281.0
YHH3_k127_1860371_21 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000000000000000000001461 166.0
YHH3_k127_1860371_22 Preprotein translocase SecG subunit K03075 - - 0.000000000000000000000000000000000000004057 148.0
YHH3_k127_1860371_23 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000001973 141.0
YHH3_k127_1860371_24 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.0000000000000000000000000000000005072 133.0
YHH3_k127_1860371_25 YfaZ precursor - - - 0.00000000001202 72.0
YHH3_k127_1860371_3 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 7.091e-269 833.0
YHH3_k127_1860371_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 1.62e-260 805.0
YHH3_k127_1860371_5 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 1.839e-258 799.0
YHH3_k127_1860371_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 2.619e-258 798.0
YHH3_k127_1860371_7 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 1.808e-251 779.0
YHH3_k127_1860371_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 1.261e-230 722.0
YHH3_k127_1860371_9 Diguanylate cyclase - - - 4.656e-212 687.0
YHH3_k127_1876_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.263e-311 958.0
YHH3_k127_1876_1 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 306.0
YHH3_k127_1876_2 Regulatory protein, FmdB family - - - 0.0000000000000000000000000000001539 124.0
YHH3_k127_1897895_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 5.553e-295 910.0
YHH3_k127_1897895_1 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 500.0
YHH3_k127_1897895_2 TIGRFAM RNA polymerase sigma factor RpoE K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004461 351.0
YHH3_k127_1897895_3 PFAM Anti sigma-E protein RseA family protein K03597 - - 0.000000000000000000000000000000000000000000000000000000000000000001899 230.0
YHH3_k127_1897895_4 MucB/RseB C-terminal domain K03598 - - 0.000000000000000000000000000000000000000001268 159.0
YHH3_k127_1897895_5 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000008612 89.0
YHH3_k127_1897895_6 - K19168 - - 0.00000003467 60.0
YHH3_k127_1931453_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 3.29e-245 762.0
YHH3_k127_1931453_1 TIGRFAM exopolysaccharide transport protein family K16692 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 2.105e-219 703.0
YHH3_k127_1931453_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 1.699e-200 627.0
YHH3_k127_1931453_3 PFAM polysaccharide export protein K01991 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008852 353.0
YHH3_k127_1931453_4 Protein of unknown function (DUF560) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003298 259.0
YHH3_k127_1931453_5 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000001479 223.0
YHH3_k127_1931453_6 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000001434 209.0
YHH3_k127_1931453_7 PFAM Protein-tyrosine phosphatase, low molecular weight K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000095 168.0
YHH3_k127_1931453_8 3'(2'),5'-bisphosphate nucleotidase K01082 - 3.1.3.7 0.000000000000000000000000005453 111.0
YHH3_k127_1931453_9 PFAM FecR protein - - - 0.0000000000000000000000001187 117.0
YHH3_k127_1956268_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1099.0
YHH3_k127_1956268_1 FtsX-like permease family K02004 - - 0.0 1063.0
YHH3_k127_1956268_10 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006379 598.0
YHH3_k127_1956268_11 FtsJ-like methyltransferase K06968 - 2.1.1.186 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006932 550.0
YHH3_k127_1956268_12 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 541.0
YHH3_k127_1956268_13 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 518.0
YHH3_k127_1956268_14 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004629 507.0
YHH3_k127_1956268_15 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 485.0
YHH3_k127_1956268_16 DNA polymerase alpha chain like domain K07053 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0097657 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 482.0
YHH3_k127_1956268_17 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 466.0
YHH3_k127_1956268_18 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007986 432.0
YHH3_k127_1956268_19 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 417.0
YHH3_k127_1956268_2 Belongs to the IlvD Edd family K01687 - 4.2.1.9 2.181e-309 954.0
YHH3_k127_1956268_20 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007302 410.0
YHH3_k127_1956268_21 GspL periplasmic domain K02461 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 411.0
YHH3_k127_1956268_22 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007963 389.0
YHH3_k127_1956268_23 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 387.0
YHH3_k127_1956268_24 SpoU rRNA Methylase family K03437 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 367.0
YHH3_k127_1956268_25 Type II secretion system (T2SS), protein K K02460 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008509 368.0
YHH3_k127_1956268_26 Type II secretion system (T2SS), protein N K02463 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000386 355.0
YHH3_k127_1956268_27 TIGRFAM Sua5 YciO YrdC YwlC family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003747 344.0
YHH3_k127_1956268_28 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004546 345.0
YHH3_k127_1956268_29 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 342.0
YHH3_k127_1956268_3 Type II/IV secretion system protein K02454 - - 1.666e-249 775.0
YHH3_k127_1956268_30 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 334.0
YHH3_k127_1956268_31 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 329.0
YHH3_k127_1956268_32 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004244 323.0
YHH3_k127_1956268_33 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 299.0
YHH3_k127_1956268_34 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000943 290.0
YHH3_k127_1956268_35 CheD chemotactic sensory transduction K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001826 281.0
YHH3_k127_1956268_36 Segregation and condensation complex subunit ScpB K06024 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004155 282.0
YHH3_k127_1956268_37 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002426 263.0
YHH3_k127_1956268_38 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002085 254.0
YHH3_k127_1956268_39 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000008681 242.0
YHH3_k127_1956268_4 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 4.442e-248 772.0
YHH3_k127_1956268_40 Ribosomal protein L9, N-terminal domain K02939 - - 0.0000000000000000000000000000000000000000000000000000000000000000008714 230.0
YHH3_k127_1956268_41 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000001865 226.0
YHH3_k127_1956268_42 PFAM outer membrane chaperone Skp (OmpH) K06142 - - 0.000000000000000000000000000000000000000000000000000000000000007646 222.0
YHH3_k127_1956268_43 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000000000000000004062 213.0
YHH3_k127_1956268_44 Prokaryotic N-terminal methylation motif K02459 - - 0.00000000000000000000000000000000000000000000000000000000006705 211.0
YHH3_k127_1956268_45 - - - - 0.00000000000000000000000000000000000000000000000000000000008021 206.0
YHH3_k127_1956268_46 - - - - 0.0000000000000000000000000000000000000000000000000000000009928 203.0
YHH3_k127_1956268_47 Copper resistance protein D - - - 0.000000000000000000000000000000000000000000000000000000003582 202.0
YHH3_k127_1956268_48 Cytotoxic translational repressor of toxin-antitoxin stability system - - - 0.00000000000000000000000000000000000000000000001408 171.0
YHH3_k127_1956268_49 Type II secretion system (T2SS), protein M K02462 - - 0.00000000000000000000000000000000000000000000004313 175.0
YHH3_k127_1956268_5 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 2.646e-242 752.0
YHH3_k127_1956268_50 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000000000000001344 162.0
YHH3_k127_1956268_51 Helix-turn-helix domain K07726 - - 0.00000000000000000000000000000000000000002605 155.0
YHH3_k127_1956268_52 general secretion pathway protein K02452 - - 0.00000000000000000000000000000000000007935 146.0
YHH3_k127_1956268_53 Type II secretion system (T2SS), protein I K02458 - - 0.0000000000000000000000000000008684 123.0
YHH3_k127_1956268_54 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000000000000000000000000002363 123.0
YHH3_k127_1956268_55 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000002953 123.0
YHH3_k127_1956268_56 Ribonuclease E/G family K08300 - 3.1.26.12 0.000000000000202 70.0
YHH3_k127_1956268_57 Glycosyl transferase family 41 - - - 0.0000001824 58.0
YHH3_k127_1956268_58 - - - - 0.00004516 48.0
YHH3_k127_1956268_6 Bacterial type II/III secretion system short domain K02453 - - 6.621e-239 762.0
YHH3_k127_1956268_7 Type II secretion system (T2SS), protein F K02455 - - 2.44e-208 653.0
YHH3_k127_1956268_8 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 1.019e-201 634.0
YHH3_k127_1956268_9 SMART PDZ DHR GLGF domain protein K11749 - - 1.088e-198 628.0
YHH3_k127_1977204_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1777.0
YHH3_k127_1977204_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1374.0
YHH3_k127_1977204_10 Transcriptional regulator K13643 - - 0.00000000000000000000000000000000000000000000000000000000000002035 218.0
YHH3_k127_1977204_14 IS30 family K07482 - - 0.00001035 48.0
YHH3_k127_1977204_2 Inositol monophosphatase family K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 484.0
YHH3_k127_1977204_3 glycosyl - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009657 479.0
YHH3_k127_1977204_4 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 438.0
YHH3_k127_1977204_5 PFAM Haloacid dehalogenase domain protein hydrolase K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 432.0
YHH3_k127_1977204_6 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000656 402.0
YHH3_k127_1977204_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 409.0
YHH3_k127_1977204_8 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002799 281.0
YHH3_k127_1977204_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000031 278.0
YHH3_k127_203837_0 Glycosyl hydrolase family 5 - - - 1.119e-255 806.0
YHH3_k127_203837_1 TIGRFAM Undecaprenyl-phosphate glucose phosphotransferase, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase K03606 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003531 591.0
YHH3_k127_203837_10 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000104 257.0
YHH3_k127_203837_11 Protein of unknown function (DUF3485) - - - 0.0000000000000000000000000000000000000000000000000000000000003442 218.0
YHH3_k127_203837_12 PFAM polysaccharide export protein K01991 - - 0.00000000000000000000000000000000000000000000000000000000006532 210.0
YHH3_k127_203837_13 WbqC-like protein family - - - 0.000000000000000000000000000000000000000000000000000000002183 207.0
YHH3_k127_203837_14 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000008274 192.0
YHH3_k127_203837_15 - - - - 0.00000000000000000000000000000000000000000000008766 175.0
YHH3_k127_203837_16 RelE toxin of RelE / RelB toxin-antitoxin system - - - 0.00000000000000000000000000000000000000005918 153.0
YHH3_k127_203837_17 PEP-CTERM motif - - - 0.000000000000000000000000000000002095 136.0
YHH3_k127_203837_18 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000006734 107.0
YHH3_k127_203837_19 Protein of unknown function (DUF2892) - - - 0.0004874 46.0
YHH3_k127_203837_2 Transmembrane exosortase (Exosortase_EpsH) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 404.0
YHH3_k127_203837_3 protein involved in exopolysaccharide biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 404.0
YHH3_k127_203837_4 Histidine kinase K20974 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 407.0
YHH3_k127_203837_5 GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004756 384.0
YHH3_k127_203837_6 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003278 326.0
YHH3_k127_203837_7 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008704 328.0
YHH3_k127_203837_8 TIGRFAM peptidyl-prolyl cis-trans isomerase, EpsD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005338 308.0
YHH3_k127_203837_9 protein involved in exopolysaccharide biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004885 289.0
YHH3_k127_2138327_0 Molybdopterin oxidoreductase Fe4S4 domain K02567 - - 0.0 1357.0
YHH3_k127_2138327_1 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000000000000000000000000000000000000000008123 188.0
YHH3_k127_2138327_2 Putative small multi-drug export protein - - - 0.000000000000000000000000000000000000000000000000006483 189.0
YHH3_k127_2138327_3 anaerobic respiration K02568 GO:0006091,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0044237,GO:0045333,GO:0055114 - 0.00000000000000000000000000008811 122.0
YHH3_k127_2138327_4 IS30 family K07482 - - 0.00004851 46.0
YHH3_k127_2158840_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 545.0
YHH3_k127_2158840_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002132 276.0
YHH3_k127_2158840_2 PFAM Phage derived protein Gp49-like (DUF891) - - - 0.0000000000000000000000000000000000000000000000000001133 187.0
YHH3_k127_2158840_3 Phage integrase family - - - 0.0000000000000003697 80.0
YHH3_k127_2158840_4 - - - - 0.0000001632 53.0
YHH3_k127_2269915_0 Protein of unknown function (DUF3365) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007959 379.0
YHH3_k127_2269915_1 Serine threonine protein kinase K08282 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000001161 202.0
YHH3_k127_2269915_2 Protein of unknown function (DUF2905) - - - 0.0000000000000000000000002176 106.0
YHH3_k127_2269915_3 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000006558 88.0
YHH3_k127_2326698_0 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 9.363e-227 709.0
YHH3_k127_2326698_1 Part of a membrane complex involved in electron transport K03615 - - 1.518e-204 648.0
YHH3_k127_2326698_10 Part of a membrane complex involved in electron transport K03617 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006343 327.0
YHH3_k127_2326698_11 Part of a membrane complex involved in electron transport K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 319.0
YHH3_k127_2326698_12 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 321.0
YHH3_k127_2326698_13 Phospholipase/Carboxylesterase K06999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009019 291.0
YHH3_k127_2326698_14 Part of a membrane complex involved in electron transport K03612 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002579 259.0
YHH3_k127_2326698_15 Protein of unknown function (DUF615) K09889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009051 248.0
YHH3_k127_2326698_16 Cobalamin adenosyltransferase K00798 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005525,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016043,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019003,GO:0019438,GO:0019538,GO:0022607,GO:0030091,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033013,GO:0033014,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000001461 226.0
YHH3_k127_2326698_17 Domain of unknown function (DUF1841) - - - 0.0000000000000000000000000000000000000000000000000000000000000001877 225.0
YHH3_k127_2326698_18 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000002217 224.0
YHH3_k127_2326698_19 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000000000000000003678 158.0
YHH3_k127_2326698_2 PFAM sodium calcium exchanger membrane region K07300 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 582.0
YHH3_k127_2326698_20 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000001453 156.0
YHH3_k127_2326698_21 Protein of unknown function (DUF3014) - - - 0.00000000000000000000000000001679 124.0
YHH3_k127_2326698_22 Cytochrome c - - - 0.00000000000000000000000002937 111.0
YHH3_k127_2326698_23 - - - - 0.00000000000000112 85.0
YHH3_k127_2326698_24 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K03286 - - 0.00000000000004046 79.0
YHH3_k127_2326698_25 Protein of unknown function (DUF2934) - - - 0.0000000000003928 74.0
YHH3_k127_2326698_3 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 532.0
YHH3_k127_2326698_4 Part of a membrane complex involved in electron transport K03614 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006764 512.0
YHH3_k127_2326698_5 Pirin K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004146 418.0
YHH3_k127_2326698_6 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 388.0
YHH3_k127_2326698_7 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 377.0
YHH3_k127_2326698_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004918 364.0
YHH3_k127_2326698_9 Part of a membrane complex involved in electron transport K03613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 346.0
YHH3_k127_2334389_0 Aminotransferase class-III K01845 - 5.4.3.8 3.018e-247 767.0
YHH3_k127_2334389_1 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 613.0
YHH3_k127_2334389_10 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000001633 211.0
YHH3_k127_2334389_11 FecR protein - - - 0.00000000000000000000000000000005927 130.0
YHH3_k127_2334389_12 Acid phosphatase homologues - - - 0.00000000000000000000006724 109.0
YHH3_k127_2334389_2 Delta-aminolevulinic acid dehydratase K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 605.0
YHH3_k127_2334389_3 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006475 466.0
YHH3_k127_2334389_4 PFAM sulfatase K03760,K19353 - 2.7.8.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000859 468.0
YHH3_k127_2334389_5 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 449.0
YHH3_k127_2334389_6 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 353.0
YHH3_k127_2334389_7 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 336.0
YHH3_k127_2334389_8 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 329.0
YHH3_k127_2334389_9 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000002302 245.0
YHH3_k127_2341499_0 PFAM Glycosyl transferase family 2 K20534 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 321.0
YHH3_k127_2341499_1 Glucosyl transferase GtrII - - - 0.00001165 58.0
YHH3_k127_2501423_0 protein involved in exopolysaccharide biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 343.0
YHH3_k127_2501423_1 Type II secretory pathway component ExeA K02450,K12283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002983 257.0
YHH3_k127_2501423_2 Sugar ABC transporter substrate-binding protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000001284 231.0
YHH3_k127_2501423_3 COG0489 ATPases involved in chromosome partitioning - - - 0.000000000000000000000000000000000000000000000000001485 195.0
YHH3_k127_2501423_4 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000009641 160.0
YHH3_k127_2501423_5 - - - - 0.0000000000000000000000000022 126.0
YHH3_k127_2501423_6 DnaJ molecular chaperone homology domain - - - 0.000000001101 68.0
YHH3_k127_257925_0 PFAM transposase, IS4 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 366.0
YHH3_k127_257925_1 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000008309 162.0
YHH3_k127_2616473_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1598.0
YHH3_k127_2616473_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1199.0
YHH3_k127_2616473_10 cytochrome - - - 0.000000000000000000000000000000000000000000003186 171.0
YHH3_k127_2616473_11 cytochrome - - - 0.00000000000000000000000000000000000000000009673 168.0
YHH3_k127_2616473_12 Bacterial protein of unknown function (DUF883) - - - 0.000000000000000000000000000000000003672 139.0
YHH3_k127_2616473_14 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.000000000000000000000001941 106.0
YHH3_k127_2616473_2 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K02031,K02032 - - 2.191e-309 959.0
YHH3_k127_2616473_3 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 2.59e-220 691.0
YHH3_k127_2616473_4 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 555.0
YHH3_k127_2616473_5 LysM domain K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006208 541.0
YHH3_k127_2616473_6 cytochrome - - - 0.00000000000000000000000000000000000000000000000000000000005753 213.0
YHH3_k127_2616473_7 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.000000000000000000000000000000000000000000000000000000000904 203.0
YHH3_k127_2616473_8 cytochrome - - - 0.000000000000000000000000000000000000000000000000000000001471 208.0
YHH3_k127_2616473_9 cytochrome - - - 0.000000000000000000000000000000000000000000000000000000001857 207.0
YHH3_k127_2961777_0 AAA domain K16898 - 3.6.4.12 0.0 1640.0
YHH3_k127_2961777_1 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 0.0 1248.0
YHH3_k127_2961777_10 Thioredoxin K03671 - - 0.0000000000000000000000000000000000000000000000000000000000009282 210.0
YHH3_k127_2961777_11 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000000000000000005417 197.0
YHH3_k127_2961777_12 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000000000000000005125 180.0
YHH3_k127_2961777_13 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.000000000000000000000000000000000000000001212 156.0
YHH3_k127_2961777_14 - - - - 0.0000000000000000000000000000006389 128.0
YHH3_k127_2961777_16 PFAM Peptidoglycan-binding LysM - - - 0.0000008047 63.0
YHH3_k127_2961777_17 Two component signalling adaptor domain K03408 - - 0.000009669 59.0
YHH3_k127_2961777_18 IS30 family K07482 - - 0.00001035 48.0
YHH3_k127_2961777_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 2.298e-258 799.0
YHH3_k127_2961777_3 ABC transporter transmembrane region K06147 - - 2.208e-207 650.0
YHH3_k127_2961777_4 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 9.626e-198 619.0
YHH3_k127_2961777_5 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 595.0
YHH3_k127_2961777_6 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002585 458.0
YHH3_k127_2961777_7 Histidine kinase K20975 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 324.0
YHH3_k127_2961777_8 PFAM peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07262 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 312.0
YHH3_k127_2961777_9 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000136 246.0
YHH3_k127_3080132_0 Flavodoxin-like fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004464 276.0
YHH3_k127_3080132_1 Protein of unknown function (DUF3175) - - - 0.000000000000000000000000000000000006351 139.0
YHH3_k127_3080132_2 - - - - 0.00000000000000000000000000000001775 130.0
YHH3_k127_3080132_3 Domain of unknown function (DUF4389) - - - 0.00000000000000000000326 96.0
YHH3_k127_3084323_0 Threonine synthase N terminus K01733 - 4.2.3.1 8.37e-289 889.0
YHH3_k127_3084323_1 Homoserine dehydrogenase K00003 - 1.1.1.3 3.066e-260 804.0
YHH3_k127_3084323_10 Domain of unknown function (DUF3488) K22452 - 2.3.2.13 0.0000000000000000000000000000000000000000000000000003062 188.0
YHH3_k127_3084323_11 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000000000000000000000000000000002777 179.0
YHH3_k127_3084323_12 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000000000000000000000157 112.0
YHH3_k127_3084323_13 - - - - 0.0000000000000000000007121 98.0
YHH3_k127_3084323_14 HicA toxin of bacterial toxin-antitoxin, - - - 0.0000000001269 64.0
YHH3_k127_3084323_2 PFAM aminotransferase class I and II K14260 - 2.6.1.2,2.6.1.66 5.149e-250 773.0
YHH3_k127_3084323_3 PFAM aminotransferase class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 5.934e-234 726.0
YHH3_k127_3084323_4 glycolate oxidase iron-sulfur subunit K11473 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006494 604.0
YHH3_k127_3084323_5 Highly conserved protein containing a thioredoxin domain K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006245 608.0
YHH3_k127_3084323_6 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004374 503.0
YHH3_k127_3084323_7 PFAM ATPase associated with various cellular activities AAA_3 K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007778 481.0
YHH3_k127_3084323_8 Membrane transport protein K07088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 431.0
YHH3_k127_3084323_9 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004681 411.0
YHH3_k127_3235800_0 Putative amidoligase enzyme (DUF2126) - - - 0.0 1025.0
YHH3_k127_3235800_1 Circularly permuted ATP-grasp type 2 - - - 2.524e-276 853.0
YHH3_k127_3235800_2 A predicted alpha-helical domain with a conserved ER motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 567.0
YHH3_k127_3235800_3 PFAM 20S proteasome, A and B subunits K07395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007135 416.0
YHH3_k127_3235800_4 PFAM CHAD domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000003369 209.0
YHH3_k127_3363064_0 Mur ligase family, catalytic domain K01924 - 6.3.2.8 5.819e-248 771.0
YHH3_k127_3363064_1 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 4.479e-247 774.0
YHH3_k127_3363064_10 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009487 588.0
YHH3_k127_3363064_11 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003404 526.0
YHH3_k127_3363064_12 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 518.0
YHH3_k127_3363064_13 D-ala D-ala ligase N-terminus K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 475.0
YHH3_k127_3363064_14 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 474.0
YHH3_k127_3363064_15 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007281 426.0
YHH3_k127_3363064_16 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 338.0
YHH3_k127_3363064_17 PFAM YaeQ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004636 250.0
YHH3_k127_3363064_18 POTRA domain, FtsQ-type - - - 0.00000000000000000000000000000000000001044 153.0
YHH3_k127_3363064_19 MraZ protein, putative antitoxin-like K03925 - - 0.000000000000000000000000000000002115 130.0
YHH3_k127_3363064_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 5.449e-234 727.0
YHH3_k127_3363064_20 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.0000000000000000000000008327 107.0
YHH3_k127_3363064_21 - - - - 0.000000000000000003681 85.0
YHH3_k127_3363064_3 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 3.299e-226 706.0
YHH3_k127_3363064_4 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 4.922e-211 667.0
YHH3_k127_3363064_5 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 4.878e-202 632.0
YHH3_k127_3363064_6 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 2.123e-199 625.0
YHH3_k127_3363064_7 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 4.412e-199 625.0
YHH3_k127_3363064_8 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005037 601.0
YHH3_k127_3363064_9 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009537 595.0
YHH3_k127_3764809_0 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 582.0
YHH3_k127_3764809_1 Universal stress protein family - - - 0.000000000000000000000000000000000000000007585 158.0
YHH3_k127_3764809_2 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.00000000000000000000000000000000000000053 151.0
YHH3_k127_4094327_0 PFAM Orn Lys Arg decarboxylase major region K01584 - 4.1.1.19 0.0 1427.0
YHH3_k127_4094327_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1069.0
YHH3_k127_4094327_2 Polypeptide-transport-associated domain protein ShlB-type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006519 530.0
YHH3_k127_4094327_3 4fe-4S ferredoxin, iron-sulfur binding domain protein K00384,K21567 - 1.18.1.2,1.19.1.1,1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 499.0
YHH3_k127_4094327_4 Sulfotransferase domain K13472 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004326 432.0
YHH3_k127_4094327_5 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 381.0
YHH3_k127_4094327_6 TIGRFAM Filamentous haemagglutinin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005218 370.0
YHH3_k127_4094327_7 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001595 259.0
YHH3_k127_4094327_8 PFAM RNA-binding S4 K04762 - - 0.00000000000000000000000000000000000000000004104 163.0
YHH3_k127_4094327_9 Cysteine-rich secretory protein family - - - 0.00000000000000000000136 107.0
YHH3_k127_4191245_0 PFAM cytochrome c oxidase subunit I K00404 - 1.9.3.1 1.571e-296 911.0
YHH3_k127_4191245_11 - - - - 0.0000000000000000000000000002069 117.0
YHH3_k127_4191245_13 - - - - 0.00000000000005184 76.0
YHH3_k127_4191245_14 Cytochrome c - - - 0.0000001378 54.0
YHH3_k127_4191245_2 Cytochrome C oxidase, mono-heme subunit/FixO - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005128 462.0
YHH3_k127_4191245_3 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 445.0
YHH3_k127_4191245_4 cytochrome - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 334.0
YHH3_k127_4191245_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006517 286.0
YHH3_k127_4191245_6 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K00404 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008263 274.0
YHH3_k127_4191245_7 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003705 254.0
YHH3_k127_4191245_8 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005738 244.0
YHH3_k127_4191245_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001032 226.0
YHH3_k127_4197185_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 GO:0000166,GO:0003674,GO:0003824,GO:0004748,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0036094,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 0.0 1624.0
YHH3_k127_4197185_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 2.784e-213 667.0
YHH3_k127_4197185_10 - K06950 - - 0.000000000000007078 77.0
YHH3_k127_4197185_2 PFAM sigma-54 factor interaction domain-containing protein K02667 - - 1.131e-202 640.0
YHH3_k127_4197185_3 PFAM ATP-binding region, ATPase domain protein K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 617.0
YHH3_k127_4197185_4 Anthranilate synthase component I domain protein K01665,K13950 - 2.6.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 421.0
YHH3_k127_4197185_5 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 415.0
YHH3_k127_4197185_6 PFAM UBA THIF-type NAD FAD binding protein K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004606 404.0
YHH3_k127_4197185_7 N-acetylmuramoyl-L-alanine amidase (Family 2) K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000001848 267.0
YHH3_k127_4197185_8 PFAM porin Gram-negative type - - - 0.000000000000000000000000000000000000000000000000000000000000000000003421 248.0
YHH3_k127_4197185_9 translation initiation factor activity - - - 0.000000000000001496 78.0
YHH3_k127_4224210_0 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 0.0 1524.0
YHH3_k127_4224210_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1344.0
YHH3_k127_4224210_10 PFAM Alcohol dehydrogenase GroES domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004951 502.0
YHH3_k127_4224210_11 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 507.0
YHH3_k127_4224210_12 TIGRFAM cytochrome c-type biogenesis protein CcmI K02200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 479.0
YHH3_k127_4224210_13 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0022900,GO:0022904,GO:0044237,GO:0044464,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071944 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 456.0
YHH3_k127_4224210_14 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 436.0
YHH3_k127_4224210_15 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 373.0
YHH3_k127_4224210_16 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005599 357.0
YHH3_k127_4224210_17 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009786 328.0
YHH3_k127_4224210_18 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 324.0
YHH3_k127_4224210_19 TIGRFAM periplasmic protein thiol disulphide oxidoreductase DsbE K02199 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002573 279.0
YHH3_k127_4224210_2 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 GO:0000104,GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.0 1097.0
YHH3_k127_4224210_20 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000000000000000000000000000000000000137 227.0
YHH3_k127_4224210_21 Cytochrome C biogenesis protein K02200 - - 0.000000000000000000000000000000000000000000000000000000008239 203.0
YHH3_k127_4224210_22 Plasmid stabilization system K19092 - - 0.00000000000000000000000000000000000000000000007072 171.0
YHH3_k127_4224210_23 TIGRFAM succinate dehydrogenase, hydrophobic membrane anchor protein K00242 - - 0.0000000000000000000000000000000000000000000362 162.0
YHH3_k127_4224210_24 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000000000000000000000000000003825 147.0
YHH3_k127_4224210_25 bacterial (prokaryotic) histone like domain K03530 - - 0.0000000000000000000000000000000000001659 142.0
YHH3_k127_4224210_26 Flavinator of succinate dehydrogenase K09159 - - 0.000000000000000000000001559 104.0
YHH3_k127_4224210_27 Protein of unknown function (DUF3617) - - - 0.00000000000000000000002799 104.0
YHH3_k127_4224210_29 - - - - 0.000000000000000007554 85.0
YHH3_k127_4224210_3 TIGRFAM cytochrome c-type biogenesis protein CcmF K02198 - - 0.0 1056.0
YHH3_k127_4224210_30 - - - - 0.00000006016 57.0
YHH3_k127_4224210_4 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.098e-243 758.0
YHH3_k127_4224210_5 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 2.166e-237 764.0
YHH3_k127_4224210_6 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 5.298e-235 730.0
YHH3_k127_4224210_7 SurA N-terminal domain K03770 - 5.2.1.8 1.945e-220 702.0
YHH3_k127_4224210_8 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 583.0
YHH3_k127_4224210_9 (GGDEF) domain K21024 - 3.1.4.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 613.0
YHH3_k127_4308359_0 glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0 2647.0
YHH3_k127_4308359_1 TIGRFAM glutamate synthase, NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 1.932e-265 822.0
YHH3_k127_4308359_10 VanZ like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002857 447.0
YHH3_k127_4308359_11 PFAM ABC-2 type transporter K09694 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 410.0
YHH3_k127_4308359_12 Serine aminopeptidase, S33 K07018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 306.0
YHH3_k127_4308359_13 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 287.0
YHH3_k127_4308359_14 Shikimate kinase K00891 - 2.7.1.71 0.0000000000000000000000000000000000000000000000000000000000000000000000002547 252.0
YHH3_k127_4308359_15 Uncharacterised protein family (UPF0093) K08973 - - 0.0000000000000000000000000000000000000000000000000000000000000004092 221.0
YHH3_k127_4308359_16 Bacterial-like globin - - - 0.00000000000000000000000000000000000000000000000000000008035 199.0
YHH3_k127_4308359_17 Ferredoxin - - - 0.0000000000000000000000000000000000000000000000000007056 184.0
YHH3_k127_4308359_18 Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria - - - 0.00005064 49.0
YHH3_k127_4308359_2 PFAM AICARFT IMPCHase bienzyme formylation region K00602 - 2.1.2.3,3.5.4.10 8.662e-255 788.0
YHH3_k127_4308359_3 PFAM Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01945 - 6.3.4.13 4.341e-227 708.0
YHH3_k127_4308359_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 4.016e-207 646.0
YHH3_k127_4308359_5 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005378 605.0
YHH3_k127_4308359_6 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 594.0
YHH3_k127_4308359_7 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005049 580.0
YHH3_k127_4308359_8 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 558.0
YHH3_k127_4308359_9 PFAM ABC transporter related K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 499.0
YHH3_k127_4331040_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 2.097e-225 714.0
YHH3_k127_4331040_1 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 468.0
YHH3_k127_4331040_3 3-beta hydroxysteroid dehydrogenase/isomerase family K01710,K01784 - 4.2.1.46,5.1.3.2 0.0004424 45.0
YHH3_k127_4397864_0 alpha-glucan phosphorylase K00688 - 2.4.1.1 0.0 1417.0
YHH3_k127_4397864_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 1.431e-275 892.0
YHH3_k127_4397864_10 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 419.0
YHH3_k127_4397864_11 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 416.0
YHH3_k127_4397864_12 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 415.0
YHH3_k127_4397864_13 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000056 393.0
YHH3_k127_4397864_14 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 334.0
YHH3_k127_4397864_15 Pfam:HipA_N K07154 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000492 334.0
YHH3_k127_4397864_16 protein conserved in bacteria K09859 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 318.0
YHH3_k127_4397864_17 dUTPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 291.0
YHH3_k127_4397864_18 Peptidoglycan-synthase activator LpoB K07337 - - 0.000000000000000000000000000000000000000000000000000000000000000000002837 240.0
YHH3_k127_4397864_19 Chemotaxis protein CheW K03408 - - 0.000000000000000000000000000000000000000000000000000000000000000001126 233.0
YHH3_k127_4397864_2 chemotaxis protein K03407 - 2.7.13.3 6.843e-268 843.0
YHH3_k127_4397864_20 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.0000000000000000000000000000000000000000000000000000000001257 208.0
YHH3_k127_4397864_21 chemotaxis protein K03408 - - 0.000000000000000000000000000000000000000000000000000000009631 202.0
YHH3_k127_4397864_22 Response regulator receiver K03413 - - 0.000000000000000000000000000000000000000000000000000383 187.0
YHH3_k127_4397864_23 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000000000000000000000000006752 185.0
YHH3_k127_4397864_24 Amino-transferase class IV K02619 - 4.1.3.38 0.0000000000000000000000000000000000000000000054 166.0
YHH3_k127_4397864_25 LPP20 lipoprotein - - - 0.00000000000000000000000000000000000000000004424 175.0
YHH3_k127_4397864_26 LPP20 lipoprotein - - - 0.000000000000000000000000000001706 131.0
YHH3_k127_4397864_28 Sel1-like repeats. K07126 - - 0.000000000000001503 89.0
YHH3_k127_4397864_29 Redoxin - - - 0.00000000000007946 79.0
YHH3_k127_4397864_3 - - - - 2.696e-233 724.0
YHH3_k127_4397864_30 Protein of unknown function (DUF1573) - - - 0.000000000000514 78.0
YHH3_k127_4397864_32 Domain of unknown function DUF302 - - - 0.0000007996 59.0
YHH3_k127_4397864_33 Helix-turn-helix XRE-family like proteins - - - 0.000002042 53.0
YHH3_k127_4397864_4 Starch synthase catalytic domain K00703 - 2.4.1.21 6.896e-199 631.0
YHH3_k127_4397864_5 Surface antigen K07278 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 568.0
YHH3_k127_4397864_6 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 520.0
YHH3_k127_4397864_7 methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005026 542.0
YHH3_k127_4397864_8 TIGRFAM DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 472.0
YHH3_k127_4397864_9 abc transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007223 459.0
YHH3_k127_4650726_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 2.313e-320 986.0
YHH3_k127_4650726_1 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000142 86.0
YHH3_k127_4650726_2 IS30 family K07482 - - 0.00001035 48.0
YHH3_k127_4701898_0 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000499 475.0
YHH3_k127_4701898_1 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 405.0
YHH3_k127_4701898_2 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.000000000000000000000000000000000000000000000000000000000000000007869 230.0
YHH3_k127_4701898_3 NAD(P)H dehydrogenase (quinone) activity - - - 0.00000000000000000000000000000000000000000000000000000000000000001427 229.0
YHH3_k127_4701898_4 Cyclophilin-like K09143 - - 0.00000000000000000000000000000000000000000000003427 172.0
YHH3_k127_4701898_5 SnoaL-like domain - - - 0.00000000000000000000000000001635 121.0
YHH3_k127_4701898_6 - - - - 0.0000000000000000000000001542 107.0
YHH3_k127_4701898_9 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.000001357 52.0
YHH3_k127_4712914_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006,K01007 - 2.7.9.1,2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 481.0
YHH3_k127_4712914_1 Inosine-uridine preferring nucleoside hydrolase K01239 - 3.2.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000523 312.0
YHH3_k127_4712914_10 CAAX protease self-immunity K07052 - - 0.00007119 53.0
YHH3_k127_4712914_11 ABC-type Na efflux pump, permease component K09696 - - 0.0001006 53.0
YHH3_k127_4712914_2 Protein of unknown function (DUF1624) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003212 259.0
YHH3_k127_4712914_3 NADH:flavin oxidoreductase / NADH oxidase family K10680 - - 0.0000000000000000000000000000000000000000000000000000000000000000746 237.0
YHH3_k127_4712914_4 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000005557 152.0
YHH3_k127_4712914_5 Pyruvate phosphate dikinase, PEP pyruvate binding K01006,K01007 - 2.7.9.1,2.7.9.2 0.000000000000000000000000000001906 128.0
YHH3_k127_4712914_6 CAAX protease self-immunity K07052 - - 0.00000000000000000000004307 110.0
YHH3_k127_4712914_7 uridine kinase - - - 0.00000000000000004459 90.0
YHH3_k127_4712914_8 UbiA prenyltransferase family K02548 - 2.5.1.74 0.0000000000006343 79.0
YHH3_k127_4712914_9 - - - - 0.000001514 58.0
YHH3_k127_4841620_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1195.0
YHH3_k127_4841620_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1054.0
YHH3_k127_4841620_10 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 1.266e-220 689.0
YHH3_k127_4841620_11 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 5.432e-199 623.0
YHH3_k127_4841620_12 Myosin-crossreactive antigen K10254 - 4.2.1.53 2.06e-198 631.0
YHH3_k127_4841620_13 TIGRFAM DNA internalization-related competence protein ComEC Rec2 K02238 - - 3.492e-197 629.0
YHH3_k127_4841620_14 TRAP C4-dicarboxylate transport system permease DctM subunit K11690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 611.0
YHH3_k127_4841620_15 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 566.0
YHH3_k127_4841620_16 protein conserved in bacteria K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286 522.0
YHH3_k127_4841620_17 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004559 486.0
YHH3_k127_4841620_18 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 480.0
YHH3_k127_4841620_19 transporter K11688 GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0008150,GO:0015711,GO:0015740,GO:0015849,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0046942,GO:0051179,GO:0051234,GO:0071702 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 430.0
YHH3_k127_4841620_2 protein synthesis factor, GTP-binding K06207 - - 1e-323 998.0
YHH3_k127_4841620_20 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008739 418.0
YHH3_k127_4841620_21 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 365.0
YHH3_k127_4841620_22 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009406 347.0
YHH3_k127_4841620_23 TIGRFAM DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 319.0
YHH3_k127_4841620_24 TIGRFAM type IV pilus biogenesis stability protein PilW K02656 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 306.0
YHH3_k127_4841620_25 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000001019 264.0
YHH3_k127_4841620_26 Tetratricopeptide repeat-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001904 264.0
YHH3_k127_4841620_27 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005044 246.0
YHH3_k127_4841620_28 Required for maturation of 30S ribosomal subunits K09748 - - 0.000000000000000000000000000000000000000000000000000000000000000000008215 235.0
YHH3_k127_4841620_29 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000004253 231.0
YHH3_k127_4841620_3 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 4.368e-266 824.0
YHH3_k127_4841620_30 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000000000000000002083 192.0
YHH3_k127_4841620_31 Tripartite ATP-independent periplasmic transporters, DctQ component K11689 - - 0.000000000000000000000000000000000000000000000000218 182.0
YHH3_k127_4841620_32 Helix-turn-helix domain K15539 - - 0.000000000000000000000000000000000000000000000002684 185.0
YHH3_k127_4841620_33 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000000001156 149.0
YHH3_k127_4841620_34 - - - - 0.00000000000000000000000000001885 120.0
YHH3_k127_4841620_36 Belongs to the ompA family - - - 0.00000000000007126 85.0
YHH3_k127_4841620_37 PFAM multiple antibiotic resistance (MarC)-related protein K05595 - - 0.00000003873 55.0
YHH3_k127_4841620_38 Multicopper oxidase K00368,K07233,K22349 - 1.16.3.3,1.7.2.1 0.00002095 56.0
YHH3_k127_4841620_4 PFAM DEAD DEAH box helicase domain protein - GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 - 8.094e-264 820.0
YHH3_k127_4841620_5 Participates in both transcription termination and antitermination K02600 - - 4.275e-263 816.0
YHH3_k127_4841620_6 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 3.772e-251 783.0
YHH3_k127_4841620_7 MscS Mechanosensitive ion channel - - - 4.6e-239 747.0
YHH3_k127_4841620_8 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 8.366e-230 716.0
YHH3_k127_4841620_9 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 5.408e-226 706.0
YHH3_k127_4937165_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 350.0
YHH3_k127_4937165_1 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000458 302.0
YHH3_k127_4937165_2 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006018 272.0
YHH3_k127_4937165_3 Sulfurtransferase TusA K04085 - - 0.000000000000000000000000000000006807 128.0
YHH3_k127_4937165_4 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.000000000000000000004979 95.0
YHH3_k127_5016364_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1522.0
YHH3_k127_5016364_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 6.678e-231 727.0
YHH3_k127_5016364_10 Small Multidrug Resistance protein - - - 0.000000000000000000000003018 102.0
YHH3_k127_5016364_2 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 2.103e-203 636.0
YHH3_k127_5016364_3 NeuB family K03856 - 2.5.1.54 7.352e-201 627.0
YHH3_k127_5016364_4 D-isomer specific 2-hydroxyacid dehydrogenase catalytic region K00058 - 1.1.1.399,1.1.1.95 1.701e-198 624.0
YHH3_k127_5016364_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007292 584.0
YHH3_k127_5016364_6 Chorismate mutase type II K01713,K14170 - 4.2.1.51,4.2.1.91,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 532.0
YHH3_k127_5016364_7 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 414.0
YHH3_k127_5016364_8 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008647 393.0
YHH3_k127_5016364_9 HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 - 3.1.3.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006208 320.0
YHH3_k127_5023465_0 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 4.096e-196 616.0
YHH3_k127_5023465_1 Bacterial protein of unknown function (DUF839) K07093 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 602.0
YHH3_k127_5023465_10 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000000008805 210.0
YHH3_k127_5023465_11 PFAM Di-haem cytochrome c - - - 0.00000000000000000000000000000000000000000000000000001863 192.0
YHH3_k127_5023465_12 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000000000000000000000000000000000000000001731 178.0
YHH3_k127_5023465_13 - - - - 0.0000000000000000000000000000000000000000000009403 172.0
YHH3_k127_5023465_14 Domain of unknown function (DUF1924) - - - 0.000000000000000000000000000000000000000000002194 168.0
YHH3_k127_5023465_15 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000000000000000000000005672 152.0
YHH3_k127_5023465_16 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000000003735 93.0
YHH3_k127_5023465_17 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000002142 63.0
YHH3_k127_5023465_18 Acid phosphatase homologues K19302 - 3.6.1.27 0.0000171 48.0
YHH3_k127_5023465_2 TIGRFAM Undecaprenyl-phosphate glucose phosphotransferase K03606 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 581.0
YHH3_k127_5023465_3 Nucleotidyl transferase K00966 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 541.0
YHH3_k127_5023465_4 Winged helix-turn-helix transcription repressor, HrcA DNA-binding K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 496.0
YHH3_k127_5023465_5 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 466.0
YHH3_k127_5023465_6 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006138 428.0
YHH3_k127_5023465_7 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 434.0
YHH3_k127_5023465_8 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 362.0
YHH3_k127_5023465_9 PFAM Dihaem cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001924 263.0
YHH3_k127_5027204_0 von Willebrand factor, type A - - - 0.0 1240.0
YHH3_k127_5027204_1 Ribulose bisphosphate carboxylase large chain, catalytic domain - - - 2.432e-302 929.0
YHH3_k127_5027204_2 ATPase associated with various cellular activities, AAA_5 K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005783 502.0
YHH3_k127_5027204_3 LysR substrate binding domain K21703 - - 0.00000000000000000000000000000000000000000000000000000000000000000001324 235.0
YHH3_k127_5027204_4 Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.000000000000000000000000000000000000000000000000000000000000000002496 228.0
YHH3_k127_5027204_5 - - - - 0.00000000000000000000000000000000000000188 151.0
YHH3_k127_5027204_6 - - - - 0.0000000000000000000000000000000001072 134.0
YHH3_k127_5156902_0 Fumarate reductase flavoprotein C-term K00394 - 1.8.99.2 0.0 1277.0
YHH3_k127_5156902_1 PUA-like domain K00958 - 2.7.7.4 7.7e-238 738.0
YHH3_k127_5156902_2 Molybdopterin oxidoreductase Fe4S4 domain K21307 - 1.8.5.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 541.0
YHH3_k127_5156902_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 446.0
YHH3_k127_5156902_4 Adenosine-5'-phosphosulfate reductase beta subunit K00395 - 1.8.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008013 340.0
YHH3_k127_5353665_0 May be involved in recombinational repair of damaged DNA K03631 - - 7.131e-249 778.0
YHH3_k127_5353665_1 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 1.64e-210 662.0
YHH3_k127_5353665_10 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K03601,K04564 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0044237,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.1,3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 389.0
YHH3_k127_5353665_11 AAA domain K12283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 369.0
YHH3_k127_5353665_12 Inhibitor of apoptosis-promoting Bax1 K19416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008049 346.0
YHH3_k127_5353665_13 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000008284 226.0
YHH3_k127_5353665_14 cytochrome - - - 0.00000000000000000000000000000000000000000000000000000000000001403 222.0
YHH3_k127_5353665_15 Thioredoxin K05838 - - 0.000000000000000000000000000000000000000000000000000001056 193.0
YHH3_k127_5353665_16 Pilus assembly protein K12279 - - 0.00000000000000000000000000000000000000006932 169.0
YHH3_k127_5353665_17 membrane - - - 0.000000000000000000000000000000000003927 138.0
YHH3_k127_5353665_18 Tetratricopeptide repeat K12284 - - 0.00000000000000000000000000000000002411 147.0
YHH3_k127_5353665_19 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.0000000000000000000000000000000005559 133.0
YHH3_k127_5353665_2 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K02652,K12276 - - 4.142e-194 621.0
YHH3_k127_5353665_20 VanZ like family - - - 0.00000000000000000000000000000000358 134.0
YHH3_k127_5353665_21 cellulose binding - - - 0.000000000000000000000000000002036 136.0
YHH3_k127_5353665_22 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K12280 - - 0.00000000000000001815 91.0
YHH3_k127_5353665_23 general secretion pathway protein K10924 - - 0.0000001061 58.0
YHH3_k127_5353665_24 TIGRFAM general secretion pathway protein H K08084 - - 0.0000001488 62.0
YHH3_k127_5353665_25 - K12281 - - 0.000001397 56.0
YHH3_k127_5353665_26 - - - - 0.00001009 55.0
YHH3_k127_5353665_27 general secretion pathway protein K02246,K02456,K10927 - - 0.00005825 53.0
YHH3_k127_5353665_3 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 486.0
YHH3_k127_5353665_4 PFAM WD40 domain protein beta Propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 508.0
YHH3_k127_5353665_5 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 469.0
YHH3_k127_5353665_6 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004165 440.0
YHH3_k127_5353665_7 type II and III secretion system protein K02453,K12282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 453.0
YHH3_k127_5353665_8 Type II secretion system (T2SS), protein F K02455,K12278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 425.0
YHH3_k127_5353665_9 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 407.0
YHH3_k127_564432_0 Aminotransferase class-III K01845 - 5.4.3.8 2.279e-237 745.0
YHH3_k127_564432_1 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003956 424.0
YHH3_k127_564432_2 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007407 392.0
YHH3_k127_564432_3 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004439 379.0
YHH3_k127_564432_4 TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005377 266.0
YHH3_k127_564432_5 - - - - 0.00000000000000000000000002192 109.0
YHH3_k127_5645246_0 PFAM Tetratricopeptide TPR_4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 526.0
YHH3_k127_5645246_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 397.0
YHH3_k127_5645246_2 Universal stress protein family - - - 0.00000000000000000004985 94.0
YHH3_k127_5768046_0 Sulfate permease family K03321 - - 3.265e-242 760.0
YHH3_k127_5768046_1 aminoacyl-histidine dipeptidase K01270 - - 4.038e-234 732.0
YHH3_k127_5768046_2 Pfam Transposase - - - 0.0004317 43.0
YHH3_k127_5775694_0 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 389.0
YHH3_k127_5775694_1 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000001126 235.0
YHH3_k127_5775694_2 Transcriptional regulator K13643 - - 0.00000000000000000000000000000000000000000000000000000001703 199.0
YHH3_k127_5775694_3 Cytochrome c K17223 - - 0.000000000000000000000000000000000000000003119 158.0
YHH3_k127_5775694_4 PFAM Sulphur oxidation protein SoxZ K17227 - - 0.000000000000000000000000001961 116.0
YHH3_k127_5821142_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 2.161e-304 942.0
YHH3_k127_5821142_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 3.276e-278 864.0
YHH3_k127_5821142_10 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 394.0
YHH3_k127_5821142_11 Indole-3-glycerol phosphate synthase K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 378.0
YHH3_k127_5821142_12 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 336.0
YHH3_k127_5821142_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001482 284.0
YHH3_k127_5821142_14 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004593 276.0
YHH3_k127_5821142_15 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001875 261.0
YHH3_k127_5821142_16 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001966 248.0
YHH3_k127_5821142_17 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000000000000000000001576 229.0
YHH3_k127_5821142_18 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000000000000003072 224.0
YHH3_k127_5821142_19 Required for insertion of 4Fe-4S clusters K15724 - - 0.000000000000000000000000000000000000000000000000000000000000001072 219.0
YHH3_k127_5821142_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 3.52e-266 833.0
YHH3_k127_5821142_20 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000000000000000000000000000000000000000000000000000000006819 211.0
YHH3_k127_5821142_21 Polymer-forming cytoskeletal - - - 0.00000000000000000000000000000000000000000000000000003334 190.0
YHH3_k127_5821142_22 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000000000000005674 131.0
YHH3_k127_5821142_23 IS30 family K07482 - - 0.00001035 48.0
YHH3_k127_5821142_3 PFAM peptidase M17 leucyl aminopeptidase domain protein K01255 - 3.4.11.1 6.555e-233 728.0
YHH3_k127_5821142_4 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 1.067e-221 692.0
YHH3_k127_5821142_5 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 5.523e-219 684.0
YHH3_k127_5821142_6 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 591.0
YHH3_k127_5821142_7 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009645 586.0
YHH3_k127_5821142_8 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 519.0
YHH3_k127_5821142_9 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005236 497.0
YHH3_k127_5932611_0 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 465.0
YHH3_k127_5932611_1 polysaccharide biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 369.0
YHH3_k127_5932611_2 Glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007481 323.0
YHH3_k127_5932611_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003424 266.0
YHH3_k127_5932611_4 Bacterial transferase hexapeptide (six repeats) K08280 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001317 262.0
YHH3_k127_5932611_5 3-demethylubiquinone-9 3-O-methyltransferase activity K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000001355 232.0
YHH3_k127_5932611_6 Glycosyltransferase WbsX - - - 0.000000000000000000000000000000000000000000001685 179.0
YHH3_k127_5932611_7 NAD(P)H-binding K01784 - 5.1.3.2 0.000001919 51.0
YHH3_k127_5982694_0 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K00997,K01207 - 2.7.8.7,3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 575.0
YHH3_k127_5982694_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 507.0
YHH3_k127_5982694_2 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004238 392.0
YHH3_k127_5982694_3 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 373.0
YHH3_k127_5982694_4 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000925 360.0
YHH3_k127_5982694_5 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 310.0
YHH3_k127_5982694_6 Phosphate-starvation-inducible E K13256 - - 0.000000000000000000000000000000000000000000000000000000002357 202.0
YHH3_k127_5982694_7 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000000000000000000000004288 180.0
YHH3_k127_5982694_8 Domain of unknown function (DUF4845) - - - 0.0000000000000000000000000000000502 130.0
YHH3_k127_5982694_9 IS30 family K07482 - - 0.00001035 48.0
YHH3_k127_5986773_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1718.0
YHH3_k127_5986773_1 cation transport ATPase K01533 - 3.6.3.4 1.781e-320 1001.0
YHH3_k127_5986773_10 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 445.0
YHH3_k127_5986773_11 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 349.0
YHH3_k127_5986773_12 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000281 321.0
YHH3_k127_5986773_13 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 323.0
YHH3_k127_5986773_14 PFAM CBS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006033 314.0
YHH3_k127_5986773_15 Transglycosylase SLT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002725 281.0
YHH3_k127_5986773_16 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004162 275.0
YHH3_k127_5986773_17 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004518 280.0
YHH3_k127_5986773_18 Pyridoxamine 5'-phosphate oxidase K07226 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001586 261.0
YHH3_k127_5986773_19 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.000000000000000000000000000000000000000000000000000000000000001812 226.0
YHH3_k127_5986773_2 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 5.986e-311 959.0
YHH3_k127_5986773_20 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000000005335 196.0
YHH3_k127_5986773_21 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000003154 168.0
YHH3_k127_5986773_22 - - - - 0.000000000000000000000000000000000000000000003023 172.0
YHH3_k127_5986773_23 PFAM formyl transferase domain protein K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000004123 174.0
YHH3_k127_5986773_24 - - - - 0.0000000000000000000000000000000000007612 143.0
YHH3_k127_5986773_25 PFAM FixH - - - 0.00000000000000000000000000000005799 131.0
YHH3_k127_5986773_26 Protein of unknown function (DUF2892) - - - 0.000000000000000000000000000002771 121.0
YHH3_k127_5986773_27 PFAM cytochrome oxidase maturation protein cbb3-type - - - 0.00000000000007439 73.0
YHH3_k127_5986773_28 Cbb3-type cytochrome oxidase component FixQ - - - 0.0000000001875 64.0
YHH3_k127_5986773_29 IS30 family K07482 - - 0.00001035 48.0
YHH3_k127_5986773_3 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 1.041e-266 826.0
YHH3_k127_5986773_4 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 7.759e-259 808.0
YHH3_k127_5986773_5 Belongs to the peptidase S41A family K03797 - 3.4.21.102 1.552e-214 674.0
YHH3_k127_5986773_6 TIGRFAM cytochrome c oxidase accessory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 610.0
YHH3_k127_5986773_7 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 499.0
YHH3_k127_5986773_8 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 500.0
YHH3_k127_5986773_9 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 462.0
YHH3_k127_5988026_0 PFAM peptidase M3A and M3B thimet oligopeptidase F K01414 - 3.4.24.70 0.0 1049.0
YHH3_k127_5988026_1 Putative diguanylate phosphodiesterase - - - 6.629e-299 936.0
YHH3_k127_5988026_10 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 320.0
YHH3_k127_5988026_11 CheD chemotactic sensory transduction K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001826 281.0
YHH3_k127_5988026_12 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000000000000000000000000009104 222.0
YHH3_k127_5988026_13 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000000000000000000000000000000000000001418 218.0
YHH3_k127_5988026_14 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000000000000000000000000000000002858 203.0
YHH3_k127_5988026_15 Response regulator receiver K02658 - - 0.00000000000000000000000000000000001383 141.0
YHH3_k127_5988026_16 Response regulator receiver K02658 - - 0.0000000000000000000000000000000004247 134.0
YHH3_k127_5988026_17 cheY-homologous receiver domain - - - 0.00000000000000000000000000000004091 137.0
YHH3_k127_5988026_18 Two component signalling adaptor domain K03408 - - 0.0000000000003871 77.0
YHH3_k127_5988026_19 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000009127 66.0
YHH3_k127_5988026_2 Amidohydrolase family K01465 - 3.5.2.3 3.85e-238 741.0
YHH3_k127_5988026_20 IS30 family K07482 - - 0.00001035 48.0
YHH3_k127_5988026_3 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 5.132e-221 709.0
YHH3_k127_5988026_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 640.0
YHH3_k127_5988026_5 PFAM aspartate ornithine carbamoyltransferase Asp Orn-binding region K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 576.0
YHH3_k127_5988026_6 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007881 581.0
YHH3_k127_5988026_7 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005503 482.0
YHH3_k127_5988026_8 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009262 388.0
YHH3_k127_5988026_9 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K02660 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003592 346.0
YHH3_k127_6010566_0 PFAM Carbamoyl-phosphate synthase L chain ATP-binding K01955 - 6.3.5.5 0.0 1939.0
YHH3_k127_6010566_1 AcrB/AcrD/AcrF family K15726 - - 0.0 1470.0
YHH3_k127_6010566_10 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 5.432e-199 623.0
YHH3_k127_6010566_11 Trypsin K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005084 610.0
YHH3_k127_6010566_12 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006393 475.0
YHH3_k127_6010566_13 COG0845 Membrane-fusion protein K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 450.0
YHH3_k127_6010566_14 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 377.0
YHH3_k127_6010566_15 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 364.0
YHH3_k127_6010566_16 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 356.0
YHH3_k127_6010566_17 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 327.0
YHH3_k127_6010566_18 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 324.0
YHH3_k127_6010566_19 NUDIX domain K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 312.0
YHH3_k127_6010566_2 PFAM Isocitrate dehydrogenase NADP-dependent monomeric type K00031 - 1.1.1.42 0.0 1305.0
YHH3_k127_6010566_20 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 311.0
YHH3_k127_6010566_21 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009316 282.0
YHH3_k127_6010566_22 Outer membrane efflux protein K15725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007961 261.0
YHH3_k127_6010566_23 PFAM Carbohydrate-selective porin OprB K07267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002507 257.0
YHH3_k127_6010566_24 NUDIX domain K08310 - 3.6.1.67 0.000000000000000000000000000000000000000000000000000000000000002866 222.0
YHH3_k127_6010566_25 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000000000000000000000004006 212.0
YHH3_k127_6010566_26 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000001135 186.0
YHH3_k127_6010566_27 CRS1_YhbY K07574 - - 0.0000000000000000000000000000000000000000000000005139 177.0
YHH3_k127_6010566_28 Barstar (barnase inhibitor) - - - 0.00000000000000000000000000000000000000000000004147 173.0
YHH3_k127_6010566_29 PFAM guanine-specific ribonuclease N1 and T1 K01167 - 3.1.27.3 0.000000000000000000000000000000000000000000008855 165.0
YHH3_k127_6010566_3 TIGRFAM ATP-dependent Clp protease ATP-binding subunit clpA K03694 - - 0.0 1165.0
YHH3_k127_6010566_30 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000005215 153.0
YHH3_k127_6010566_31 SMART Cold shock protein K03704 - - 0.000000000000000000000000000000000001971 138.0
YHH3_k127_6010566_32 Regulatory protein, FmdB family - - - 0.00000000000000000000000000000000001701 136.0
YHH3_k127_6010566_4 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0 1121.0
YHH3_k127_6010566_5 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1090.0
YHH3_k127_6010566_6 Ammonium Transporter Family K03320,K06580 - - 3.411e-238 739.0
YHH3_k127_6010566_7 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 1.935e-237 742.0
YHH3_k127_6010566_8 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 3.16e-231 722.0
YHH3_k127_6010566_9 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 6.016e-214 668.0
YHH3_k127_6046973_0 SMART heat shock protein DnaJ domain protein K05801 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 394.0
YHH3_k127_6046973_10 Belongs to the ompA family K03286 - - 0.00000000000000000000000000001106 131.0
YHH3_k127_6046973_11 OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane K03286 GO:0000746,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006950,GO:0006974,GO:0008150,GO:0009279,GO:0009597,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0015267,GO:0015288,GO:0016020,GO:0016021,GO:0016032,GO:0019058,GO:0019867,GO:0022803,GO:0022829,GO:0022857,GO:0030260,GO:0030312,GO:0030313,GO:0031224,GO:0031975,GO:0032991,GO:0033554,GO:0034220,GO:0042802,GO:0043207,GO:0044403,GO:0044409,GO:0044419,GO:0044425,GO:0044462,GO:0044464,GO:0044764,GO:0046718,GO:0046930,GO:0050896,GO:0051179,GO:0051234,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051806,GO:0051828,GO:0055085,GO:0071944,GO:0098796 - 0.00000000000000000008296 102.0
YHH3_k127_6046973_12 Belongs to the phosphoglycerate mutase family K02226,K22306 - 3.1.3.73,3.1.3.85 0.00000000000000008774 87.0
YHH3_k127_6046973_13 PIN domain K07062 - - 0.000000000006338 65.0
YHH3_k127_6046973_14 - - - - 0.0000000002385 72.0
YHH3_k127_6046973_3 PFAM HAMP domain, Methyl-accepting chemotaxis protein (MCP) signaling domain K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001532 289.0
YHH3_k127_6046973_5 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000001141 171.0
YHH3_k127_6046973_6 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000003494 156.0
YHH3_k127_6046973_7 PFAM heat shock protein DnaJ domain protein - - - 0.000000000000000000000000000000000004221 139.0
YHH3_k127_6046973_8 - - - - 0.0000000000000000000000000000000003582 151.0
YHH3_k127_6046973_9 Transcriptional regulator - - - 0.0000000000000000000000000000003459 126.0
YHH3_k127_6092651_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1125.0
YHH3_k127_6092651_1 PFAM tRNA synthetase class II (D K and N) K04567 - 6.1.1.6 6.771e-284 876.0
YHH3_k127_6092651_10 Transglycosylase SLT domain K08305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 406.0
YHH3_k127_6092651_11 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005387 389.0
YHH3_k127_6092651_12 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006008 340.0
YHH3_k127_6092651_13 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 321.0
YHH3_k127_6092651_14 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 302.0
YHH3_k127_6092651_15 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000528 281.0
YHH3_k127_6092651_16 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002631 267.0
YHH3_k127_6092651_17 - - - - 0.00000000000000000000000000000000000000000000000000000005516 200.0
YHH3_k127_6092651_18 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.000000000000000000000000000000000000000000000152 173.0
YHH3_k127_6092651_19 NlpC/P60 family K19303 - - 0.0000000000000000000000000000000000000000009925 161.0
YHH3_k127_6092651_2 DHH family K07462 - - 2.233e-268 836.0
YHH3_k127_6092651_20 translation initiation factor activity - - - 0.0000000000000000000000000000000007687 137.0
YHH3_k127_6092651_21 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000000000009055 115.0
YHH3_k127_6092651_22 Recombinase zinc beta ribbon domain - - - 0.00001102 49.0
YHH3_k127_6092651_23 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0005102 43.0
YHH3_k127_6092651_3 ACT domain K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576 2.7.2.4 4.556e-233 725.0
YHH3_k127_6092651_4 Involved in the biosynthesis of porphyrin-containing compound - - - 3.754e-201 632.0
YHH3_k127_6092651_5 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 1.372e-197 618.0
YHH3_k127_6092651_6 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 604.0
YHH3_k127_6092651_7 Anthranilate synthase component I domain protein K01665,K13950 - 2.6.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 583.0
YHH3_k127_6092651_8 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 571.0
YHH3_k127_6092651_9 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 401.0
YHH3_k127_6118645_0 Putative diguanylate phosphodiesterase - - - 6.061e-248 782.0
YHH3_k127_6118645_1 ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 354.0
YHH3_k127_6165377_0 Putative diguanylate phosphodiesterase - - - 3.692e-247 777.0
YHH3_k127_6165377_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 569.0
YHH3_k127_6165377_2 TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009806 552.0
YHH3_k127_6165377_3 TRAP transporter T-component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 403.0
YHH3_k127_6165377_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 372.0
YHH3_k127_6165377_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 341.0
YHH3_k127_6165377_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001353 248.0
YHH3_k127_6165377_7 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000002198 187.0
YHH3_k127_6165377_8 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.0000001336 58.0
YHH3_k127_6291080_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1472.0
YHH3_k127_6291080_1 2Fe-2S iron-sulfur cluster binding domain - - - 5.708e-228 714.0
YHH3_k127_6291080_10 Peptidase family M23 K08259 - 3.4.24.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 350.0
YHH3_k127_6291080_11 Pfam:Methyltransf_26 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004145 283.0
YHH3_k127_6291080_12 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006546 245.0
YHH3_k127_6291080_13 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000006877 194.0
YHH3_k127_6291080_14 Protein of unknown function (DUF721) - - - 0.0000000000000000000000000000000006562 134.0
YHH3_k127_6291080_15 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000000004505 90.0
YHH3_k127_6291080_2 PFAM Type II secretion system F domain K02653 - - 2.805e-194 612.0
YHH3_k127_6291080_3 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 567.0
YHH3_k127_6291080_4 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity K14540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000625 501.0
YHH3_k127_6291080_5 Thiamine monophosphate synthase K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 471.0
YHH3_k127_6291080_6 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 443.0
YHH3_k127_6291080_7 Belongs to the pseudouridine synthase RsuA family K06183 - 5.4.99.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008255 411.0
YHH3_k127_6291080_8 Protein of unknown function (DUF815) K06923 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 389.0
YHH3_k127_6291080_9 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003308 364.0
YHH3_k127_6355621_0 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 514.0
YHH3_k127_6355621_1 Hsp90 protein K04079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 448.0
YHH3_k127_6355621_2 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003447 363.0
YHH3_k127_6355621_3 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.0000000000000000000000000000000000000000000000000000000000008576 214.0
YHH3_k127_6355621_4 - - - - 0.000000000000000000000000000000003708 131.0
YHH3_k127_6450036_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1617.0
YHH3_k127_6450036_1 PFAM FAD linked oxidase domain protein K00104 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0033554,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 1.1.3.15 2.334e-285 881.0
YHH3_k127_6450036_10 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000001395 183.0
YHH3_k127_6450036_11 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000003077 167.0
YHH3_k127_6450036_12 YCII-related domain - - - 0.00000000000000000000000000000002458 128.0
YHH3_k127_6450036_13 glycolate oxidase iron-sulfur subunit K11473 - - 0.0000000000000000000000000000000282 125.0
YHH3_k127_6450036_14 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000002345 85.0
YHH3_k127_6450036_15 ATPase activity K02065 - - 0.000000001572 67.0
YHH3_k127_6450036_16 Domain of unknown function (DUF3362) - - - 0.00005332 45.0
YHH3_k127_6450036_2 PFAM FAD linked oxidase domain protein K00104,K11472 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 572.0
YHH3_k127_6450036_3 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 450.0
YHH3_k127_6450036_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009032 383.0
YHH3_k127_6450036_5 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003305 380.0
YHH3_k127_6450036_6 Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 310.0
YHH3_k127_6450036_7 MltA-interacting protein MipA - - - 0.0000000000000000000000000000000000000000000000000000000000000000002422 239.0
YHH3_k127_6450036_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000007137 241.0
YHH3_k127_6450036_9 Protein of unknown function, DUF481 K07283 - - 0.000000000000000000000000000000000000000000000000000001208 201.0
YHH3_k127_6489260_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1894.0
YHH3_k127_6489260_1 ABC transporter C-terminal domain K15738 - - 0.0 1080.0
YHH3_k127_6489260_10 cellulose synthase operon C domain protein K20543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007714 342.0
YHH3_k127_6489260_11 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 321.0
YHH3_k127_6489260_12 Glycoprotease family K14742 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 313.0
YHH3_k127_6489260_13 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000897 287.0
YHH3_k127_6489260_14 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009633 279.0
YHH3_k127_6489260_15 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000005395 265.0
YHH3_k127_6489260_16 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789,K14742 - 2.3.1.128 0.00000000000000000000000000000000000000000000000000006339 190.0
YHH3_k127_6489260_17 Plasmid maintenance system killer K07334 - - 0.00000000000000000000000000000000000000000000000000007706 186.0
YHH3_k127_6489260_18 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000002221 194.0
YHH3_k127_6489260_19 addiction module antidote protein HigA K21498 - - 0.0000000000000000000000000000000000000000007006 159.0
YHH3_k127_6489260_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 8.825e-286 901.0
YHH3_k127_6489260_20 PFAM Integrase catalytic region K07497 - - 0.0000000004453 61.0
YHH3_k127_6489260_21 Major Facilitator Superfamily - - - 0.000005121 49.0
YHH3_k127_6489260_3 cellulose synthase K00694 - 2.4.1.12 3.644e-274 871.0
YHH3_k127_6489260_4 Major Facilitator Superfamily - - - 1.096e-209 658.0
YHH3_k127_6489260_5 Domain of unknown function (DUF4372) - - - 4.656e-195 614.0
YHH3_k127_6489260_6 cellulose synthase K20541 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009619 561.0
YHH3_k127_6489260_7 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004351 516.0
YHH3_k127_6489260_8 PFAM glycoside hydrolase family 8 K01179,K20542 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 348.0
YHH3_k127_6489260_9 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 335.0
YHH3_k127_6489517_0 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 352.0
YHH3_k127_6489517_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 347.0
YHH3_k127_6489517_2 PFAM Spermine synthase K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004877 320.0
YHH3_k127_6489517_3 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004452 276.0
YHH3_k127_6489517_4 Prokaryotic cytochrome b561 - - - 0.000000000000000000000000000000000000000000000000000000000000000001106 231.0
YHH3_k127_6489517_5 Protein of unknown function (DUF2937) - - - 0.000000000000000000000000000000000000000000000000000000000000000007781 233.0
YHH3_k127_6524061_0 - - - - 0.00000000000000000000000000000000000000000000003086 175.0
YHH3_k127_6524061_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000001261 156.0
YHH3_k127_6607737_0 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 515.0
YHH3_k127_6607737_1 receptor K02014,K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005716 442.0
YHH3_k127_6607737_10 Prolyl oligopeptidase family K06889 - - 0.000000000000000001419 88.0
YHH3_k127_6607737_11 - - - - 0.00000000000007685 77.0
YHH3_k127_6607737_12 OmpA-like transmembrane domain - - - 0.0007768 49.0
YHH3_k127_6607737_13 Protein of unknown function (DUF2846) - - - 0.000807 51.0
YHH3_k127_6607737_2 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 366.0
YHH3_k127_6607737_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005944 361.0
YHH3_k127_6607737_4 EVE domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003956 291.0
YHH3_k127_6607737_5 Sulfite exporter TauE/SafE - - - 0.00000000000000000000000000000000000000000000000000000000000000000001114 236.0
YHH3_k127_6607737_6 - - - - 0.00000000000000000000000000000000000000000000000002672 185.0
YHH3_k127_6607737_7 Cell division protein ZapA K09888 - - 0.00000000000000000000000000000000000000001055 157.0
YHH3_k127_6607737_8 - - - - 0.0000000000000000000000000000000000002771 145.0
YHH3_k127_6607737_9 membrane transporter protein K07090 - - 0.00000000000000000000000004619 113.0
YHH3_k127_6747758_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 1.293e-235 760.0
YHH3_k127_6747758_1 Doubled CXXCH motif (Paired_CXXCH_1) - - - 2.373e-228 737.0
YHH3_k127_6747758_10 PFAM NHL repeat containing protein - - - 0.0000000000007216 68.0
YHH3_k127_6747758_11 - - - - 0.00000002587 66.0
YHH3_k127_6747758_2 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008761 332.0
YHH3_k127_6747758_3 cytochrome c biogenesis protein K07399 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 332.0
YHH3_k127_6747758_4 HAF family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002312 260.0
YHH3_k127_6747758_5 Cytochrome c-type biogenesis protein K02200 - - 0.00000000000000000000000000000000000000000000000000000000000000000001944 246.0
YHH3_k127_6747758_6 Cytochrome C and Quinol oxidase polypeptide I - - - 0.0000000000000000000000000000000000000000000000000000000000000002034 246.0
YHH3_k127_6747758_7 Tetratricopeptide repeat - - - 0.0000000000000000000000000000004287 141.0
YHH3_k127_6747758_8 Thioredoxin-like - - - 0.000000000000000000000001873 111.0
YHH3_k127_6747758_9 DCD (Development and cell death) domain protein K10442,K10446,K10457 GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005856,GO:0008150,GO:0008582,GO:0040008,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044087,GO:0044424,GO:0044464,GO:0045886,GO:0045926,GO:0048519,GO:0048523,GO:0048638,GO:0048640,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0051093,GO:0051128,GO:0051129,GO:0051239,GO:0051241,GO:0051960,GO:0051961,GO:0051963,GO:0051964,GO:0065007,GO:0065008,GO:1904396,GO:1904397,GO:1905809,GO:2000026 - 0.0000000000000003562 91.0
YHH3_k127_6784545_0 Vitamin B12 dependent methionine synthase activation region K00548 - 2.1.1.13 0.0 2152.0
YHH3_k127_6784545_1 Glutamine synthetase, catalytic domain K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 4.411e-295 907.0
YHH3_k127_6784545_10 Belongs to the SAICAR synthetase family K01923 GO:0003674,GO:0003824,GO:0004639,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 449.0
YHH3_k127_6784545_11 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002593 359.0
YHH3_k127_6784545_12 DNA primase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000499 316.0
YHH3_k127_6784545_13 Carbonic anhydrase K01673 GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0008150,GO:0008270,GO:0015976,GO:0016829,GO:0016835,GO:0016836,GO:0043167,GO:0043169,GO:0046872,GO:0046914 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001259 279.0
YHH3_k127_6784545_15 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000004835 254.0
YHH3_k127_6784545_16 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002487 259.0
YHH3_k127_6784545_17 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000216 229.0
YHH3_k127_6784545_18 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000001711 231.0
YHH3_k127_6784545_19 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000003191 220.0
YHH3_k127_6784545_2 Nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 2.47e-253 786.0
YHH3_k127_6784545_20 Putative member of DMT superfamily (DUF486) K09922 - - 0.00000000000000000000000000000000000000000000000000000000000001594 216.0
YHH3_k127_6784545_21 Protein of unknown function (DUF4065) - - - 0.000000000000000000000000000000000000000000000000000000000001056 214.0
YHH3_k127_6784545_22 Staphylococcal nuclease homologues - - - 0.00000000000000000000000000000000000000000000000003664 190.0
YHH3_k127_6784545_23 Phage integrase family K04763 - - 0.00000000000000000000000000000000000000000000008872 175.0
YHH3_k127_6784545_24 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000000000000000000000002055 171.0
YHH3_k127_6784545_25 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000000000000000000001264 161.0
YHH3_k127_6784545_26 type IV pilus modification protein PilV K02671 - - 0.00000000000000000000000000000000000002271 152.0
YHH3_k127_6784545_27 - - - - 0.00000000000000000000000000000000000002681 145.0
YHH3_k127_6784545_28 - - - - 0.000000000000000000000000000000000006077 140.0
YHH3_k127_6784545_29 TIGRFAM fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.0000000000000000000000000000000004994 131.0
YHH3_k127_6784545_3 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 3.692e-248 771.0
YHH3_k127_6784545_30 COG4968 Tfp pilus assembly protein PilE K02655 - - 0.0000000000000000000000000000704 122.0
YHH3_k127_6784545_31 Pilus assembly protein PilX - - - 0.00000000000000000000003155 106.0
YHH3_k127_6784545_32 - - - - 0.00000000000000000000006039 104.0
YHH3_k127_6784545_33 - - - - 0.000000000000000000000664 101.0
YHH3_k127_6784545_34 - - - - 0.0000000000000000000009346 100.0
YHH3_k127_6784545_35 protein transport across the cell outer membrane K08084 - - 0.0000000000000002513 85.0
YHH3_k127_6784545_36 Protein of unknown function (DUF1249) K09920 - - 0.0000000145 61.0
YHH3_k127_6784545_37 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.000008485 55.0
YHH3_k127_6784545_38 IS30 family K07482 - - 0.00001035 48.0
YHH3_k127_6784545_4 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 6.238e-246 765.0
YHH3_k127_6784545_5 Neisseria PilC beta-propeller domain K02674 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 637.0
YHH3_k127_6784545_6 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 579.0
YHH3_k127_6784545_7 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 581.0
YHH3_k127_6784545_8 SMART ATP-binding region ATPase domain protein K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004056 496.0
YHH3_k127_6784545_9 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 471.0
YHH3_k127_6955010_0 Domain of unknown function DUF21 K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 549.0
YHH3_k127_6955010_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004756 384.0
YHH3_k127_6955010_2 Thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009115 315.0
YHH3_k127_6955010_3 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002401 254.0
YHH3_k127_6955010_4 LTXXQ motif family protein - - - 0.00000000000000000000000000000000000000000000000000000005819 203.0
YHH3_k127_6955010_5 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000000000000007893 186.0
YHH3_k127_6955010_6 Putative prokaryotic signal transducing protein - - - 0.0000000000000000000000000004458 116.0
YHH3_k127_6955010_8 - - - - 0.000000000000000000512 90.0
YHH3_k127_6955010_9 Hemerythrin HHE cation binding domain K07216 - - 0.00000003854 63.0
YHH3_k127_7013335_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1342.0
YHH3_k127_7013335_1 TIGRFAM heavy metal efflux pump, CzcA family K07787 - - 0.0 1174.0
YHH3_k127_7013335_10 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 289.0
YHH3_k127_7013335_11 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001229 268.0
YHH3_k127_7013335_12 SapC - - - 0.00000000000000000000000000000000000000000000000000007553 196.0
YHH3_k127_7013335_13 - - - - 0.000000000000001606 84.0
YHH3_k127_7013335_14 Copper binding periplasmic protein CusF K07810 - - 0.000000000000007002 79.0
YHH3_k127_7013335_15 - - - - 0.00000001291 61.0
YHH3_k127_7013335_2 PFAM glycosyl transferase family 35 K00688 - 2.4.1.1 7.001e-273 848.0
YHH3_k127_7013335_3 TIGRFAM efflux transporter, RND family, MFP subunit K07798,K15727 - - 1.084e-201 642.0
YHH3_k127_7013335_4 PFAM outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005798 582.0
YHH3_k127_7013335_5 Nucleotidyl transferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002922 476.0
YHH3_k127_7013335_6 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 451.0
YHH3_k127_7013335_7 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009184 436.0
YHH3_k127_7013335_8 Phosphorylase superfamily K00772,K03815 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 387.0
YHH3_k127_7013335_9 Pfam:Transaldolase K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 365.0
YHH3_k127_7115370_0 RNB K01147 - 3.1.13.1 3.046e-320 988.0
YHH3_k127_7115370_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 3.244e-316 981.0
YHH3_k127_7115370_10 TonB C terminal K03832 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 351.0
YHH3_k127_7115370_11 ABC 3 transport family K02075 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 336.0
YHH3_k127_7115370_12 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004764,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046417,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0055114,GO:0061458,GO:0071704,GO:1901576,GO:1901615 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005386 322.0
YHH3_k127_7115370_13 Polynucleotide kinase 3 phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002811 305.0
YHH3_k127_7115370_14 Protein of unknown function DUF45 K07043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006765 270.0
YHH3_k127_7115370_15 PFAM Excinuclease ABC C subunit domain protein K07461 - - 0.0000000000000000000000000007977 115.0
YHH3_k127_7115370_16 - - - - 0.00000000000000000001205 95.0
YHH3_k127_7115370_17 Histone H1-like K11252,K11254,K11275 GO:0000122,GO:0000166,GO:0000228,GO:0000785,GO:0000786,GO:0000788,GO:0000790,GO:0000791,GO:0000792,GO:0001558,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0005488,GO:0005509,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005719,GO:0005720,GO:0006323,GO:0006325,GO:0006333,GO:0006355,GO:0006357,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0007275,GO:0007517,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008213,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010629,GO:0010638,GO:0016043,GO:0016208,GO:0016569,GO:0016570,GO:0016571,GO:0016584,GO:0017076,GO:0018022,GO:0018023,GO:0018193,GO:0018205,GO:0019001,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0022607,GO:0030261,GO:0030307,GO:0030554,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031399,GO:0031401,GO:0031490,GO:0031497,GO:0031647,GO:0031974,GO:0031981,GO:0032259,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032552,GO:0032553,GO:0032554,GO:0032555,GO:0032558,GO:0032559,GO:0032561,GO:0032564,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033365,GO:0034502,GO:0034613,GO:0034728,GO:0034968,GO:0035327,GO:0035639,GO:0036094,GO:0036211,GO:0040008,GO:0042826,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043531,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044815,GO:0045184,GO:0045892,GO:0045927,GO:0045934,GO:0046872,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050821,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051276,GO:0051568,GO:0051570,GO:0051574,GO:0051641,GO:0060255,GO:0061061,GO:0065007,GO:0065008,GO:0070013,GO:0070199,GO:0070727,GO:0070734,GO:0071103,GO:0071168,GO:0071169,GO:0071704,GO:0071824,GO:0071840,GO:0072594,GO:0080090,GO:0080182,GO:0097159,GO:0097367,GO:0098532,GO:1901265,GO:1901363,GO:1901564,GO:1902275,GO:1902679,GO:1903506,GO:1903507,GO:1905269,GO:2000112,GO:2000113,GO:2001141,GO:2001252 - 0.00001934 53.0
YHH3_k127_7115370_18 IS30 family K07482 - - 0.00004851 46.0
YHH3_k127_7115370_2 MgtE intracellular N domain K06213 - - 8.069e-254 789.0
YHH3_k127_7115370_3 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 6.827e-229 717.0
YHH3_k127_7115370_4 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 1.49e-213 669.0
YHH3_k127_7115370_5 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 593.0
YHH3_k127_7115370_6 phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 544.0
YHH3_k127_7115370_7 Zinc-uptake complex component A periplasmic K02077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 483.0
YHH3_k127_7115370_8 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 378.0
YHH3_k127_7115370_9 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005966 380.0
YHH3_k127_7115900_0 Glutaminyl-tRNA synthetase K01886 - 6.1.1.18 2.161e-299 924.0
YHH3_k127_7115900_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 4.999e-265 822.0
YHH3_k127_7115900_10 Response regulator receiver K07714,K07715 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006289 577.0
YHH3_k127_7115900_11 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005946 561.0
YHH3_k127_7115900_12 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003627 550.0
YHH3_k127_7115900_13 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 532.0
YHH3_k127_7115900_14 PFAM Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008383 513.0
YHH3_k127_7115900_15 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 509.0
YHH3_k127_7115900_16 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 441.0
YHH3_k127_7115900_17 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 383.0
YHH3_k127_7115900_18 TIGRFAM HAD-superfamily subfamily IB hydrolase, TIGR01490 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007963 371.0
YHH3_k127_7115900_19 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 376.0
YHH3_k127_7115900_2 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 9.722e-255 787.0
YHH3_k127_7115900_20 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain K07315,K11444 - 2.7.7.65,3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009092 350.0
YHH3_k127_7115900_21 CheB methylesterase K03412,K13491 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 344.0
YHH3_k127_7115900_22 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K13487 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 343.0
YHH3_k127_7115900_23 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 324.0
YHH3_k127_7115900_24 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005549 315.0
YHH3_k127_7115900_25 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 312.0
YHH3_k127_7115900_26 Appr-1-p processing - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 293.0
YHH3_k127_7115900_27 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006304 301.0
YHH3_k127_7115900_28 Bacterial dnaA protein K10763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004735 290.0
YHH3_k127_7115900_29 Protein of unknown function (DUF520) K09767 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001073 279.0
YHH3_k127_7115900_3 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.808e-251 779.0
YHH3_k127_7115900_30 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004843 265.0
YHH3_k127_7115900_31 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000279 272.0
YHH3_k127_7115900_32 DJ-1/PfpI family K03152 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000000000005874 242.0
YHH3_k127_7115900_33 PFAM CheR methyltransferase, SAM binding domain K13486 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005966 253.0
YHH3_k127_7115900_34 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000000000008025 239.0
YHH3_k127_7115900_35 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000000008192 223.0
YHH3_k127_7115900_36 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000000000000001511 208.0
YHH3_k127_7115900_37 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.000000000000000000000000000000000000000000000000000000005204 207.0
YHH3_k127_7115900_38 riboflavin synthase, alpha K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000003368 203.0
YHH3_k127_7115900_39 Phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.000000000000000000000000000000000000000000000000001014 189.0
YHH3_k127_7115900_4 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 4.04e-219 685.0
YHH3_k127_7115900_40 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.000000000000000000000000000000000000000000000002313 174.0
YHH3_k127_7115900_41 chemotaxis K03408,K13486,K13489 - - 0.0000000000000000000000000000000000000000000007454 173.0
YHH3_k127_7115900_42 Protein of unknown function (DUF3014) - - - 0.0000000000000000000000000000000000000002483 152.0
YHH3_k127_7115900_43 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000000000000000000117 137.0
YHH3_k127_7115900_44 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000003493 145.0
YHH3_k127_7115900_45 PFAM CheW domain protein K13488 - - 0.0000000000000000000000000007807 118.0
YHH3_k127_7115900_46 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000006712 98.0
YHH3_k127_7115900_47 Sel1 domain protein repeat-containing protein K07126 - - 0.00000000000000008 89.0
YHH3_k127_7115900_48 IS30 family K07482 - - 0.00004851 46.0
YHH3_k127_7115900_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K13490 - - 1.69e-214 692.0
YHH3_k127_7115900_6 PFAM aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 1.156e-211 661.0
YHH3_k127_7115900_7 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 601.0
YHH3_k127_7115900_8 fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 589.0
YHH3_k127_7115900_9 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 587.0
YHH3_k127_7253778_0 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 562.0
YHH3_k127_7253778_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009784 515.0
YHH3_k127_7253778_2 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000000000000000000000000000000000000002206 198.0
YHH3_k127_7253778_3 IS30 family K07482 - - 0.00004851 46.0
YHH3_k127_7384764_0 Molybdopterin oxidoreductase Fe4S4 domain K21307 - 1.8.5.6 0.0 1358.0
YHH3_k127_7384764_1 Sulfate transporter antisigma-factor antagonist STAS K03321 - - 3.954e-310 957.0
YHH3_k127_7384764_2 DMSO reductase anchor subunit (DmsC) K21309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 497.0
YHH3_k127_7384764_3 4Fe-4S binding domain K21308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 482.0
YHH3_k127_7384764_4 response to heat K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000007625 242.0
YHH3_k127_7386464_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1424.0
YHH3_k127_7386464_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1256.0
YHH3_k127_7386464_10 LysM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004201 413.0
YHH3_k127_7386464_11 Histidine kinase K07673 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007438 360.0
YHH3_k127_7386464_12 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 328.0
YHH3_k127_7386464_13 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000001582 256.0
YHH3_k127_7386464_14 Domain of unknown function (DUF4390) - - - 0.00000000000000000000000000000000000000000000000000000000000000269 225.0
YHH3_k127_7386464_15 Protein of unknown function (DUF494) K03747 - - 0.00000000000000000000000000000000000000000000000000000000000005464 216.0
YHH3_k127_7386464_16 helix_turn_helix, Lux Regulon K07684 - - 0.00000000000000000000000000000000000000000000000000000000353 206.0
YHH3_k127_7386464_17 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000000000000000000000000000000000000002716 172.0
YHH3_k127_7386464_2 histidine kinase HAMP region domain protein - - - 1.135e-310 966.0
YHH3_k127_7386464_3 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 6.084e-248 771.0
YHH3_k127_7386464_4 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 3.197e-225 701.0
YHH3_k127_7386464_5 SMART Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 594.0
YHH3_k127_7386464_6 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000357 578.0
YHH3_k127_7386464_7 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 582.0
YHH3_k127_7386464_8 DNA recombination-mediator protein A K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005117 499.0
YHH3_k127_7386464_9 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009425 437.0
YHH3_k127_7406183_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1416.0
YHH3_k127_7406183_1 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 0.0 1042.0
YHH3_k127_7406183_10 Cytochrome c K17223 - - 0.000000000000000000000000000000000000000000001321 167.0
YHH3_k127_7406183_11 PFAM Sulphur oxidation protein SoxZ K17227 - - 0.000000000000000000000000000000000000000001739 159.0
YHH3_k127_7406183_12 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000000000005439 134.0
YHH3_k127_7406183_13 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000000001078 80.0
YHH3_k127_7406183_14 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.000000002736 63.0
YHH3_k127_7406183_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 1.068e-240 751.0
YHH3_k127_7406183_3 transporter component K07112 - - 3.613e-209 653.0
YHH3_k127_7406183_4 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006799 523.0
YHH3_k127_7406183_5 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009568 439.0
YHH3_k127_7406183_6 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007249 422.0
YHH3_k127_7406183_7 sulfur oxidation protein SoxY K17226 - - 0.000000000000000000000000000000000000000000000000000000000000000004251 228.0
YHH3_k127_7406183_8 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.000000000000000000000000000000000000000000000000000000000000000278 228.0
YHH3_k127_7406183_9 Thioredoxin-like K07152 - - 0.0000000000000000000000000000000000000000000000000000000001455 207.0
YHH3_k127_7471789_0 Fumarate reductase flavoprotein C-term K00394 - 1.8.99.2 0.0 1269.0
YHH3_k127_7471789_1 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006653 567.0
YHH3_k127_7471789_10 - - - - 0.0000000000000000000000000000000000000000000000000000000006501 203.0
YHH3_k127_7471789_11 Domain of unknown function (DUF4279) - - - 0.000000000000000000000000000000000000000000000000000000001015 204.0
YHH3_k127_7471789_12 - - - - 0.00000000000000000000000000000000000000000001742 161.0
YHH3_k127_7471789_2 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000407 426.0
YHH3_k127_7471789_3 Histidine kinase K07673 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 399.0
YHH3_k127_7471789_4 Adenosine-5'-phosphosulfate reductase beta subunit K00395 - 1.8.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 344.0
YHH3_k127_7471789_5 helix_turn_helix, Lux Regulon K07684 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 334.0
YHH3_k127_7471789_6 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 299.0
YHH3_k127_7471789_7 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001582 254.0
YHH3_k127_7471789_8 Histidine triad (Hit) protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003261 243.0
YHH3_k127_7471789_9 rhodanese-related sulfurtransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001719 236.0
YHH3_k127_7513232_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 4.948e-319 983.0
YHH3_k127_7513232_1 General secretory system II protein E domain protein K02454 - - 2.058e-286 889.0
YHH3_k127_7513232_10 ABC transporter K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 392.0
YHH3_k127_7513232_11 Tetrapyrrole (Corrin/Porphyrin) Methylases K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005749 352.0
YHH3_k127_7513232_12 ATPase MipZ K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 350.0
YHH3_k127_7513232_13 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002349 272.0
YHH3_k127_7513232_14 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000000000000000000000000003194 231.0
YHH3_k127_7513232_15 Scaffold protein Nfu NifU - - - 0.0000000000000000000000000000000000000000000000000000000000000003697 224.0
YHH3_k127_7513232_16 NifU-like N terminal domain K04488 - - 0.000000000000000000000000000000000000000000000000000000000002759 213.0
YHH3_k127_7513232_17 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000000000000000000000000000000000001821 196.0
YHH3_k127_7513232_18 Belongs to the UPF0310 family - - - 0.00000000000000000000000000000000000000000000004923 171.0
YHH3_k127_7513232_19 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000001358 155.0
YHH3_k127_7513232_2 FeS assembly protein SufB K09014 - - 1.283e-265 822.0
YHH3_k127_7513232_21 Transcriptional regulator - - - 0.000000000000000000000000000000000000001141 151.0
YHH3_k127_7513232_22 conserved small protein - - - 0.00000000000000000000000000000000000002476 146.0
YHH3_k127_7513232_23 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000000000000000008323 121.0
YHH3_k127_7513232_24 - - - - 0.0000000000000002952 81.0
YHH3_k127_7513232_25 Mannose-6-phosphate isomerase K16011 - 2.7.7.13,5.3.1.8 0.0000000000003569 68.0
YHH3_k127_7513232_26 dehydrogenase - - - 0.00001286 48.0
YHH3_k127_7513232_3 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 4.036e-204 641.0
YHH3_k127_7513232_4 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004744 559.0
YHH3_k127_7513232_5 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645,K13935,K15355 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 538.0
YHH3_k127_7513232_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 522.0
YHH3_k127_7513232_7 Capsule polysaccharide biosynthesis protein K07265 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 466.0
YHH3_k127_7513232_8 KR domain K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 426.0
YHH3_k127_7513232_9 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 403.0
YHH3_k127_7574118_0 Belongs to the DegT DnrJ EryC1 family K02805 - 2.6.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 577.0
YHH3_k127_7574118_1 Glycosyl transferase family 2 K20534 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 487.0
YHH3_k127_7574118_2 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 307.0
YHH3_k127_7574118_3 GtrA-like protein - - - 0.0000000000000000000000000000000000464 137.0
YHH3_k127_7574118_5 IS30 family K07482 - - 0.00001035 48.0
YHH3_k127_7575187_0 Alpha amylase, C-terminal all-beta domain K00700 - 2.4.1.18 0.0 1292.0
YHH3_k127_7575187_1 Glycosyl hydrolase family 57 - - - 1.34e-296 917.0
YHH3_k127_7575187_10 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.00000000000000000000000000000000000000000000000000000000000000000000000001524 263.0
YHH3_k127_7575187_11 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000002111 193.0
YHH3_k127_7575187_12 VanZ like family - - - 0.000000000000000000000000000000000000000000001262 167.0
YHH3_k127_7575187_13 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000001215 171.0
YHH3_k127_7575187_14 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000003466 166.0
YHH3_k127_7575187_15 - - - - 0.000000003998 60.0
YHH3_k127_7575187_16 - - - - 0.00000002403 55.0
YHH3_k127_7575187_17 Helix-turn-helix XRE-family like proteins - - - 0.0000002124 57.0
YHH3_k127_7575187_18 IS30 family K07482 - - 0.00001035 48.0
YHH3_k127_7575187_19 SMART helix-turn-helix domain protein K18831 - - 0.00001502 48.0
YHH3_k127_7575187_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 4.722e-284 876.0
YHH3_k127_7575187_3 Phosphoglucose isomerase K01810 - 5.3.1.9 9.45e-273 849.0
YHH3_k127_7575187_4 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 7.028e-258 841.0
YHH3_k127_7575187_5 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 3.502e-248 770.0
YHH3_k127_7575187_6 4-alpha-glucanotransferase K00705 - 2.4.1.25 1.002e-226 711.0
YHH3_k127_7575187_7 6-phosphogluconate dehydrogenase K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005098 525.0
YHH3_k127_7575187_8 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007163 278.0
YHH3_k127_7575187_9 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003238 273.0
YHH3_k127_7583232_0 PFAM transposase IS204 IS1001 IS1096 IS1165 family protein K07485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000039 456.0
YHH3_k127_7685056_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1503.0
YHH3_k127_7685056_1 Protein of unknown function - - - 0.0 1400.0
YHH3_k127_7685056_10 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007898 267.0
YHH3_k127_7685056_11 Zinc-finger domain - - - 0.0000000000000000000000001622 106.0
YHH3_k127_7685056_12 phosphorelay signal transduction system - - - 0.000000000000000000000001218 108.0
YHH3_k127_7685056_14 FecR protein - - - 0.00006495 53.0
YHH3_k127_7685056_2 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1242.0
YHH3_k127_7685056_3 PFAM peptidase U62 modulator of DNA gyrase K03568 - - 4.846e-277 856.0
YHH3_k127_7685056_4 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835,K01840,K15778 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005488,GO:0005975,GO:0005976,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009244,GO:0009311,GO:0009312,GO:0009405,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0042120,GO:0042121,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044419,GO:0046394,GO:0046401,GO:0046402,GO:0046872,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.4.2.2,5.4.2.8 2.517e-245 764.0
YHH3_k127_7685056_5 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004145 591.0
YHH3_k127_7685056_6 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006129 524.0
YHH3_k127_7685056_7 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008616 471.0
YHH3_k127_7764474_0 belongs to the UPF0276 family K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005011 334.0
YHH3_k127_7764474_1 Putative DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 319.0
YHH3_k127_7764474_2 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 312.0
YHH3_k127_7764474_3 PFAM DoxX family protein K15977 - - 0.0000000000000000000000000000000000000000000000000000000000005983 214.0
YHH3_k127_7764474_4 Predicted integral membrane protein (DUF2282) - - - 0.00000000000000002559 85.0
YHH3_k127_7858535_0 long-chain fatty acid transport protein - - - 0.0 1189.0
YHH3_k127_7858535_1 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.0 1013.0
YHH3_k127_7858535_10 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000307 258.0
YHH3_k127_7858535_11 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001319 254.0
YHH3_k127_7858535_12 antibiotic catabolic process K13277,K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002239 280.0
YHH3_k127_7858535_13 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001311 241.0
YHH3_k127_7858535_14 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000183 240.0
YHH3_k127_7858535_15 Belongs to the MsrB Met sulfoxide reductase family K07305,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000216 213.0
YHH3_k127_7858535_16 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000292 221.0
YHH3_k127_7858535_17 YCII-related domain K09780 - - 0.0000000000000000000000000000000000000000003098 159.0
YHH3_k127_7858535_18 TIGRFAM conserved repeat domain - - - 0.0000000000000000000000000000000000000002259 154.0
YHH3_k127_7858535_19 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000006534 132.0
YHH3_k127_7858535_2 Large family of predicted nucleotide-binding domains K07175 - - 4.434e-268 829.0
YHH3_k127_7858535_20 TIGRFAM conserved repeat domain - - - 0.00000000000000000000000000000002091 141.0
YHH3_k127_7858535_21 BolA-like protein K05527 - - 0.00000000000000000000000000001048 121.0
YHH3_k127_7858535_22 Bacterial SH3 domain - - - 0.000000000000000000001895 100.0
YHH3_k127_7858535_23 - - - - 0.00000000000000003884 94.0
YHH3_k127_7858535_24 PFAM Sulphatase-modifying factor - - - 0.00007423 55.0
YHH3_k127_7858535_3 CHASE2 K01768 - 4.6.1.1 4.923e-219 695.0
YHH3_k127_7858535_4 Integrase, catalytic region - - - 6.2e-213 665.0
YHH3_k127_7858535_5 Reverse transcriptase (RNA-dependent DNA polymerase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 505.0
YHH3_k127_7858535_6 PFAM glycine cleavage T protein (aminomethyl transferase) K06980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 397.0
YHH3_k127_7858535_7 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000979 319.0
YHH3_k127_7858535_8 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 319.0
YHH3_k127_7858535_9 Intracellular septation protein A K06190 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 289.0
YHH3_k127_7908571_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1225.0
YHH3_k127_7908571_1 Spermidine synthase K00797 - 2.5.1.16 0.0 1177.0
YHH3_k127_7908571_10 PFAM peptidase S1 and S6 chymotrypsin Hap K04691,K04772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 551.0
YHH3_k127_7908571_11 Sulfatase-modifying factor enzyme 1 K20333 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008815 527.0
YHH3_k127_7908571_12 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005212 514.0
YHH3_k127_7908571_13 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 511.0
YHH3_k127_7908571_14 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 507.0
YHH3_k127_7908571_15 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 498.0
YHH3_k127_7908571_16 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 483.0
YHH3_k127_7908571_17 Sigma-70 factor, region 1.2 K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 462.0
YHH3_k127_7908571_18 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 457.0
YHH3_k127_7908571_19 Cytochrome C oxidase, mono-heme subunit/FixO - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 456.0
YHH3_k127_7908571_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 9.408e-306 948.0
YHH3_k127_7908571_20 endonuclease III K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 458.0
YHH3_k127_7908571_21 P-loop ATPase protein family K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 452.0
YHH3_k127_7908571_22 Pfam Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 452.0
YHH3_k127_7908571_23 Serine Threonine protein K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 456.0
YHH3_k127_7908571_24 ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 424.0
YHH3_k127_7908571_25 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 381.0
YHH3_k127_7908571_26 Histidine biosynthesis protein K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004928 378.0
YHH3_k127_7908571_27 NIF3 (NGG1p interacting factor 3) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009592 374.0
YHH3_k127_7908571_28 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 362.0
YHH3_k127_7908571_29 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 354.0
YHH3_k127_7908571_3 PFAM cytochrome c oxidase subunit I K00404 - 1.9.3.1 4.457e-297 912.0
YHH3_k127_7908571_30 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004666 349.0
YHH3_k127_7908571_31 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 347.0
YHH3_k127_7908571_32 Glutathione S-transferase, C-terminal domain K03599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 343.0
YHH3_k127_7908571_33 cytochrome - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 321.0
YHH3_k127_7908571_34 TIGRFAM 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003502 299.0
YHH3_k127_7908571_35 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006338 280.0
YHH3_k127_7908571_36 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008107 282.0
YHH3_k127_7908571_37 Cytochrome C and Quinol oxidase polypeptide I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006118 276.0
YHH3_k127_7908571_38 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K00404 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003327 273.0
YHH3_k127_7908571_39 PFAM Heptaprenyl diphosphate synthase component I K00805 - 2.5.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005005 267.0
YHH3_k127_7908571_4 Polysulphide reductase, NrfD K00185 - - 1.287e-267 827.0
YHH3_k127_7908571_40 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003408 265.0
YHH3_k127_7908571_41 PFAM Metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002265 260.0
YHH3_k127_7908571_42 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005847 256.0
YHH3_k127_7908571_43 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000105 256.0
YHH3_k127_7908571_44 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001674 246.0
YHH3_k127_7908571_45 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001872 248.0
YHH3_k127_7908571_46 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000329 236.0
YHH3_k127_7908571_47 - - - - 0.000000000000000000000000000000000000000000000000000000000000000008121 230.0
YHH3_k127_7908571_48 - - - - 0.00000000000000000000000000000000000000000000000000000000000000004471 230.0
YHH3_k127_7908571_49 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000008621 216.0
YHH3_k127_7908571_5 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 6.546e-251 780.0
YHH3_k127_7908571_50 HIT domain K02503 - - 0.00000000000000000000000000000000000000000000000000000000002432 207.0
YHH3_k127_7908571_51 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.000000000000000000000000000000000000000000000000000000004718 204.0
YHH3_k127_7908571_52 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.00000000000000000000000000000000000000000000000000000001163 203.0
YHH3_k127_7908571_53 Serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000006232 202.0
YHH3_k127_7908571_54 Stringent starvation protein B K03600 - - 0.0000000000000000000000000000000000000000000000008131 179.0
YHH3_k127_7908571_55 NusG domain II - - - 0.000000000000000000000000000000000000000000000002613 175.0
YHH3_k127_7908571_56 PFAM sigma 54 modulation protein ribosomal protein S30EA K05808 - - 0.000000000000000000000000000000000000000000000004637 174.0
YHH3_k127_7908571_57 Phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.00000000000000000000000000000000000000000001492 164.0
YHH3_k127_7908571_58 - - - - 0.0000000000000000000000000000000000000000009653 160.0
YHH3_k127_7908571_59 - - - - 0.000000000000000000000000000000000000002972 149.0
YHH3_k127_7908571_6 4 iron, 4 sulfur cluster binding K02574 - - 1.548e-222 696.0
YHH3_k127_7908571_61 - - - - 0.0000000000000000000000000000000003137 138.0
YHH3_k127_7908571_62 - - - - 0.0000000000000000000000000000000009465 135.0
YHH3_k127_7908571_63 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000000000000000000000000002791 132.0
YHH3_k127_7908571_65 Rhodanese Homology Domain - - - 0.000000000000000000000000000000006681 135.0
YHH3_k127_7908571_66 - - - - 0.0000000000000000000000000002838 117.0
YHH3_k127_7908571_67 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000000000003116 110.0
YHH3_k127_7908571_7 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 2.782e-199 631.0
YHH3_k127_7908571_70 - - - - 0.0000000000001412 73.0
YHH3_k127_7908571_71 - - - - 0.0000000000002516 74.0
YHH3_k127_7908571_72 IS30 family K07482 - - 0.00001035 48.0
YHH3_k127_7908571_8 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 586.0
YHH3_k127_8022280_0 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009115 567.0
YHH3_k127_8022280_1 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 314.0
YHH3_k127_8022280_2 Histidine triad (Hit) protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003647 244.0
YHH3_k127_8022280_3 rhodanese-related sulfurtransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001126 235.0
YHH3_k127_8022280_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000009952 222.0
YHH3_k127_8022280_5 Domain of unknown function (DUF4279) - - - 0.0000000000000000000000000000000000000000000000000000000001115 207.0
YHH3_k127_8022280_6 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000000000002895 148.0
YHH3_k127_8022280_8 IS30 family K07482 - - 0.00001035 48.0
YHH3_k127_8083235_0 PFAM ABC transporter related - - - 0.0 997.0
YHH3_k127_8083235_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 1.775e-311 960.0
YHH3_k127_8083235_10 Protein of unknown function, DUF481 K07283 - - 0.000000000000000000000000000000000000000000000000003035 191.0
YHH3_k127_8083235_11 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.00000000000000000000000000000000000000000006227 160.0
YHH3_k127_8083235_12 - - - - 0.000000000000000000000000000000000000000008148 161.0
YHH3_k127_8083235_13 PTS HPr component phosphorylation site K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000802 148.0
YHH3_k127_8083235_14 - - - - 0.0000931 46.0
YHH3_k127_8083235_15 Pfam Transposase - - - 0.0004317 43.0
YHH3_k127_8083235_2 Glutamate-cysteine ligase K01919 - 6.3.2.2 2.707e-234 730.0
YHH3_k127_8083235_3 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 1.169e-208 652.0
YHH3_k127_8083235_4 PFAM Major facilitator superfamily K08218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 601.0
YHH3_k127_8083235_5 aminopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009241 523.0
YHH3_k127_8083235_6 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 465.0
YHH3_k127_8083235_7 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008894 323.0
YHH3_k127_8083235_8 TIGRFAM ornithine aminotransferase K00819 - 2.6.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005482 277.0
YHH3_k127_8083235_9 PFAM PTS system fructose subfamily IIA component K02821 - 2.7.1.194 0.00000000000000000000000000000000000000000000000000000008968 197.0
YHH3_k127_8442422_0 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 415.0
YHH3_k127_8442422_1 - - - - 0.00000000000000000005475 92.0
YHH3_k127_8442422_2 Cytochrome c7 and related cytochrome c - - - 0.000000007847 58.0
YHH3_k127_8528329_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1410.0
YHH3_k127_8528329_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0 1092.0
YHH3_k127_8528329_10 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 507.0
YHH3_k127_8528329_11 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 501.0
YHH3_k127_8528329_12 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 419.0
YHH3_k127_8528329_13 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005584 383.0
YHH3_k127_8528329_14 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007812 390.0
YHH3_k127_8528329_15 ParB-like nuclease domain K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 375.0
YHH3_k127_8528329_16 Phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 329.0
YHH3_k127_8528329_17 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001102 279.0
YHH3_k127_8528329_18 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004365 267.0
YHH3_k127_8528329_19 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004202 252.0
YHH3_k127_8528329_2 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 0.0 1015.0
YHH3_k127_8528329_20 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000000000000000000000000000000000000000000000000001411 226.0
YHH3_k127_8528329_21 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000000000000000000000000502 217.0
YHH3_k127_8528329_22 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000000000000000000000000000000000000000111 215.0
YHH3_k127_8528329_23 Thioredoxin-like K07152 - - 0.000000000000000000000000000000000000000000000000000000005326 203.0
YHH3_k127_8528329_24 sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000000000000000001514 201.0
YHH3_k127_8528329_25 Cytochrome c K17223 - - 0.00000000000000000000000000000000000000000000005876 171.0
YHH3_k127_8528329_26 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000004973 173.0
YHH3_k127_8528329_27 PFAM Sulphur oxidation protein SoxZ K17227 - - 0.00000000000000000000000000000000000000001797 155.0
YHH3_k127_8528329_28 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000000000000000000000004983 140.0
YHH3_k127_8528329_29 - - - - 0.00000000000000000000000000000000004041 141.0
YHH3_k127_8528329_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.09e-302 931.0
YHH3_k127_8528329_30 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000000000000001407 132.0
YHH3_k127_8528329_31 - - - - 0.00000000000000000000000000000001277 131.0
YHH3_k127_8528329_32 - - - - 0.000000000000000000000001328 111.0
YHH3_k127_8528329_33 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000000006388 80.0
YHH3_k127_8528329_34 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.0000000007506 65.0
YHH3_k127_8528329_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.839e-280 864.0
YHH3_k127_8528329_5 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 8.197e-232 723.0
YHH3_k127_8528329_6 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 7.437e-213 675.0
YHH3_k127_8528329_7 transporter component K07112 - - 9.333e-198 620.0
YHH3_k127_8528329_8 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007836 602.0
YHH3_k127_8528329_9 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 515.0
YHH3_k127_8528530_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1545.0
YHH3_k127_8528530_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00646,K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 9.292e-243 753.0
YHH3_k127_8528530_2 Outer membrane usher protein K07347 - - 3.66e-241 769.0
YHH3_k127_8528530_3 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 471.0
YHH3_k127_8528530_4 Biotin-lipoyl like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009752 408.0
YHH3_k127_8528530_5 Pili and flagellar-assembly chaperone, PapD N-terminal domain K07346 - - 0.0000000000000000000000000000000000000000000000000000000000000001929 228.0
YHH3_k127_8528530_6 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000000005651 138.0
YHH3_k127_8528530_7 Spore Coat Protein U domain - - - 0.00000000000000000000002078 111.0
YHH3_k127_8651102_0 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 4.548e-204 647.0
YHH3_k127_89090_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 4.518e-238 745.0
YHH3_k127_89090_1 HI0933-like protein K07007 - - 1.814e-210 659.0
YHH3_k127_89090_10 PFAM CHAD domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 468.0
YHH3_k127_89090_11 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008552 418.0
YHH3_k127_89090_12 Peptidogalycan biosysnthesis/recognition K09919 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 400.0
YHH3_k127_89090_13 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009115 389.0
YHH3_k127_89090_14 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 379.0
YHH3_k127_89090_15 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008789 358.0
YHH3_k127_89090_16 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007017 329.0
YHH3_k127_89090_17 LemA Family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 317.0
YHH3_k127_89090_18 Protein of unknown function (DUF938) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 307.0
YHH3_k127_89090_19 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002736 280.0
YHH3_k127_89090_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K14067 - 6.2.1.9 7.779e-207 648.0
YHH3_k127_89090_20 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000004064 263.0
YHH3_k127_89090_21 COG1512 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002218 269.0
YHH3_k127_89090_22 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000002124 242.0
YHH3_k127_89090_23 TPM domain - - - 0.00000000000000000000000000000000000000000000000000000000000001037 219.0
YHH3_k127_89090_24 Eukaryotic integral membrane protein (DUF1751) - - - 0.000000000000000000000000000000000000000000000000000000002857 205.0
YHH3_k127_89090_25 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000007546 187.0
YHH3_k127_89090_26 - - - - 0.00000000000000000000000000000000000000000000000000318 186.0
YHH3_k127_89090_27 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.000000000000000000000000000000000000000003644 168.0
YHH3_k127_89090_28 Domain of unknown function (DUF4389) - - - 0.0000000000000000000005676 98.0
YHH3_k127_89090_29 Major facilitator Superfamily K06902 - - 0.0000000000002244 70.0
YHH3_k127_89090_3 PFAM alanine dehydrogenase PNT domain protein K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 605.0
YHH3_k127_89090_30 endonuclease activity - - - 0.00000000005596 66.0
YHH3_k127_89090_31 DNA polymerase X family K02347 - - 0.00001771 48.0
YHH3_k127_89090_4 Belongs to the HpcH HpaI aldolase family K01644,K08691 - 4.1.3.24,4.1.3.25,4.1.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004111 566.0
YHH3_k127_89090_5 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 567.0
YHH3_k127_89090_6 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 541.0
YHH3_k127_89090_7 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002973 513.0
YHH3_k127_89090_8 (GGDEF) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000536 519.0
YHH3_k127_89090_9 Alpha/beta hydrolase family K03928 - 3.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 465.0
YHH3_k127_9005818_0 Belongs to the UPF0061 (SELO) family - - - 2.195e-245 765.0
YHH3_k127_9005818_1 PFAM DEAD DEAH box helicase domain protein - - - 4.377e-207 653.0
YHH3_k127_9005818_10 protein conserved in bacteria K09954 - - 0.000000000000000000000000000000001347 131.0
YHH3_k127_9005818_12 - - - - 0.00000000002191 70.0
YHH3_k127_9005818_2 Dehydrogenase - - - 2.272e-201 634.0
YHH3_k127_9005818_3 similarity to GP 3192745 - - - 3.378e-194 615.0
YHH3_k127_9005818_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009074 331.0
YHH3_k127_9005818_5 Virulence factor BrkB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007185 327.0
YHH3_k127_9005818_6 TRANSCRIPTIONal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007656 263.0
YHH3_k127_9005818_7 COG3040 Bacterial lipocalin K03098 - - 0.000000000000000000000000000000000000000000000000007108 187.0
YHH3_k127_9005818_8 DsrC like protein K11179 - - 0.00000000000000000000000000000000000000000000000002639 180.0
YHH3_k127_9005818_9 - - - - 0.00000000000000000000000000000000000000000000002891 173.0
YHH3_k127_9256256_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0 1041.0
YHH3_k127_9256256_1 PFAM phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 2.926e-284 880.0
YHH3_k127_9256256_10 KR domain K00059,K03793 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008667,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0022607,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.100,1.5.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 386.0
YHH3_k127_9256256_11 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 317.0
YHH3_k127_9256256_12 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.000000000000000000000000000000000000000000000000000000000000000000002138 241.0
YHH3_k127_9256256_13 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000000000000000001474 213.0
YHH3_k127_9256256_14 Diguanylate cyclase with PAS PAC and GAF sensors - - - 0.000000000000000000000000000000000000000000000000000003667 206.0
YHH3_k127_9256256_15 pathogenesis - - - 0.0000000000000000000000000000000000125 153.0
YHH3_k127_9256256_16 diguanylate cyclase - - - 0.00000000000000000000000000003 127.0
YHH3_k127_9256256_17 DNA-binding protein VF530 - - - 0.00000000000000000000000003579 109.0
YHH3_k127_9256256_18 FecR protein - - - 0.0000000000000000000005969 110.0
YHH3_k127_9256256_19 PFAM Phage derived protein Gp49-like (DUF891) - - - 0.000000000007069 66.0
YHH3_k127_9256256_2 - - - - 8.132e-251 778.0
YHH3_k127_9256256_3 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 1.157e-222 699.0
YHH3_k127_9256256_4 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 595.0
YHH3_k127_9256256_5 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005309 521.0
YHH3_k127_9256256_6 hemolysin activation secretion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003653 482.0
YHH3_k127_9256256_7 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000659 437.0
YHH3_k127_9256256_8 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 397.0
YHH3_k127_9256256_9 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009305 392.0
YHH3_k127_9294723_0 Domain of unknown function (DUF3400) - - - 0.0 2189.0
YHH3_k127_9294723_1 Sodium:solute symporter family - - - 1.791e-205 649.0
YHH3_k127_9294723_2 TIGRFAM phosphate regulon sensor kinase PhoR K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 612.0
YHH3_k127_9294723_3 Two component transcriptional regulator PhoB, winged helix family K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 392.0
YHH3_k127_9294723_4 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 356.0
YHH3_k127_9294723_5 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000002008 99.0
YHH3_k127_9294723_6 B-1 B cell differentiation K07126,K13582 - - 0.00008614 55.0
YHH3_k127_9294723_7 FAD linked oxidase - - - 0.0007563 44.0
YHH3_k127_9370040_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1594.0
YHH3_k127_9370040_1 Penicillin-binding protein OB-like domain K05366 - 2.4.1.129,3.4.16.4 0.0 1192.0
YHH3_k127_9370040_10 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 583.0
YHH3_k127_9370040_11 MltA specific insert domain K08304 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006812 579.0
YHH3_k127_9370040_12 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005981 384.0
YHH3_k127_9370040_13 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 344.0
YHH3_k127_9370040_14 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003677 313.0
YHH3_k127_9370040_15 Pilus assembly protein, PilO K02664 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000926 303.0
YHH3_k127_9370040_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 287.0
YHH3_k127_9370040_17 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003925 280.0
YHH3_k127_9370040_18 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000000000000000000000000000000000000000000000000000003877 260.0
YHH3_k127_9370040_19 Fimbrial assembly protein (PilN) K02663 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001599 253.0
YHH3_k127_9370040_2 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 6.543e-280 865.0
YHH3_k127_9370040_20 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000002328 249.0
YHH3_k127_9370040_21 Pilus assembly protein, PilP K02665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004826 247.0
YHH3_k127_9370040_22 YGGT family K02221 - - 0.0000000000000000000000000000000000000000000000000000000000003048 217.0
YHH3_k127_9370040_23 ApaG domain K06195 - - 0.0000000000000000000000000000000000000000000000000000001197 197.0
YHH3_k127_9370040_24 FecR protein - - - 0.000000000000000000000000000000000000000000001217 169.0
YHH3_k127_9370040_25 Ribosomal silencing factor during starvation K09710 - - 0.00000000000000000000000000000000000001568 148.0
YHH3_k127_9370040_26 type II secretion system protein E K02454,K02652,K12276 - - 0.00000000000000000000000000000000000001649 151.0
YHH3_k127_9370040_27 DUF167 K09131 - - 0.000000000000000000000000000000006268 132.0
YHH3_k127_9370040_28 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000009651 52.0
YHH3_k127_9370040_3 PFAM RNA-binding protein AU-1 Ribonuclease E G K08301 - - 1.067e-259 805.0
YHH3_k127_9370040_4 PFAM type II and III secretion system protein K02666 - - 2.393e-252 797.0
YHH3_k127_9370040_5 Metallo-beta-lactamase superfamily - - - 4.534e-251 779.0
YHH3_k127_9370040_6 THUMP K07444 - - 5.375e-213 664.0
YHH3_k127_9370040_7 PFAM type II secretion system protein E K02670 - - 2.466e-205 643.0
YHH3_k127_9370040_8 PFAM type II secretion system protein E K02669,K12203 - - 1.115e-197 620.0
YHH3_k127_9370040_9 TIGRFAM type IV pilus assembly protein PilM K02662 - - 3.501e-194 610.0
YHH3_k127_9716407_0 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 389.0
YHH3_k127_9716407_1 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000003122 129.0
YHH3_k127_9716407_2 Cytochrome c7 and related cytochrome c - - - 0.000000000000000139 83.0
YHH3_k127_9723955_0 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 1.472e-212 665.0
YHH3_k127_9723955_1 Molybdopterin oxidoreductase Fe4S4 domain K21307 - 1.8.5.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002443 518.0
YHH3_k127_9723955_2 - - - - 0.00000000000000000000000000000000000000000000001268 173.0
YHH3_k127_9813938_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1700.0
YHH3_k127_9813938_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 1.094e-295 922.0
YHH3_k127_9813938_10 Pfam:DUF989 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006879 254.0
YHH3_k127_9813938_11 Ribosomal protein L17 K02879 - - 0.00000000000000000000000000000000000000000000000000000000000000000007978 231.0
YHH3_k127_9813938_12 PFAM Class I peptide chain release factor K15034 - - 0.0000000000000000000000000000000000000000000000002745 180.0
YHH3_k127_9813938_13 DsrE/DsrF-like family K09004 - - 0.000000000000000000000000000000000000004002 152.0
YHH3_k127_9813938_14 cytochrome - - - 0.000000000000000000000002282 105.0
YHH3_k127_9813938_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 1.648e-234 730.0
YHH3_k127_9813938_3 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00322 - 1.6.1.1 3.546e-201 638.0
YHH3_k127_9813938_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 584.0
YHH3_k127_9813938_5 Flavocytochrome c sulphide dehydrogenase, flavin-binding K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 539.0
YHH3_k127_9813938_6 Divalent cation transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 439.0
YHH3_k127_9813938_7 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 394.0
YHH3_k127_9813938_8 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 363.0
YHH3_k127_9813938_9 LysR substrate binding domain K21703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 303.0
YHH3_k127_9922401_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 2.311e-228 711.0
YHH3_k127_9922401_1 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 1.807e-217 676.0
YHH3_k127_9922401_10 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000004432 136.0
YHH3_k127_9922401_2 Belongs to the DegT DnrJ EryC1 family - - - 2.636e-207 649.0
YHH3_k127_9922401_3 Glycosyl transferase family 2 K10012 - 2.4.2.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 538.0
YHH3_k127_9922401_4 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 525.0
YHH3_k127_9922401_5 Formyl transferase, C-terminal domain K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000655 516.0
YHH3_k127_9922401_6 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004125 414.0
YHH3_k127_9922401_7 PFAM Appr-1-p processing domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005253 291.0
YHH3_k127_9922401_8 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000000000000003867 215.0
YHH3_k127_9922401_9 Small Multidrug Resistance protein - - - 0.00000000000000000000000000000000000000000000000000000009378 196.0
YHH3_k127_9961180_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002302 302.0
YHH3_k127_9961180_1 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000002684 214.0
YHH3_k127_9961180_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K03286,K12976,K16079 - - 0.0000000000000000000000000000000000000000000000000000161 196.0
YHH3_k127_9961180_3 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000001158 163.0
YHH3_k127_9961180_4 - - - - 0.000000000000000000000000000000000009159 147.0
YHH3_k127_9961180_5 Cytochrome c K17230 - - 0.0000000000000000003837 95.0