logo

Overview

ID MAG04575
Name YHH3_bin.39
Sample SMP0123
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Enterobacterales
Family Alteromonadaceae
Genus Rheinheimera
Species
Assembly information
Completeness (%) 73.96
Contamination (%) 3.7
GC content (%) 52.0
N50 (bp) 3,279
Genome size (bp) 2,980,456

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3325

Gene name Description KEGG GOs EC E-value Score Sequence
YHH3_k127_10015243_0 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02461 - - 7.171e-198 622.0
YHH3_k127_10015243_1 General secretion pathway protein F K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 513.0
YHH3_k127_10015243_10 Type II secretion system (T2SS), protein M - - - 0.00000000000000000000000000000000000000000000000000000000000000000003936 235.0
YHH3_k127_10015243_11 type II secretion system protein I J K02458 - - 0.000000000000000000000000000000001509 136.0
YHH3_k127_10015243_2 General secretion pathway protein K K02460 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 505.0
YHH3_k127_10015243_3 3'(2'),5'-bisphosphate nucleotidase K01082 - 3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 454.0
YHH3_k127_10015243_4 subfamily IA, variant 3 K20881 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 421.0
YHH3_k127_10015243_5 type II secretion system protein N K02463 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 382.0
YHH3_k127_10015243_6 General secretion pathway protein J K02459 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 339.0
YHH3_k127_10015243_7 general secretion pathway protein h K02457 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 286.0
YHH3_k127_10015243_8 Type II secretion system (T2SS), protein G - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001855 263.0
YHH3_k127_10015243_9 Hydrolase K08312 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002493 246.0
YHH3_k127_10052605_0 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 426.0
YHH3_k127_10052605_1 Pseudouridine synthase K06177 - 5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 410.0
YHH3_k127_10052605_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 354.0
YHH3_k127_10052605_4 SMART Nucleotide binding protein, PINc K07175 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 324.0
YHH3_k127_10052605_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000743 279.0
YHH3_k127_10075740_0 glyoxalase III activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002175 259.0
YHH3_k127_10088779_0 peptidase - - - 9.631e-198 624.0
YHH3_k127_10089734_0 fatty acid transporter K02106 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 1.25e-225 702.0
YHH3_k127_10089734_1 TonB dependent receptor - - - 3.333e-223 696.0
YHH3_k127_10109741_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 1.02e-235 731.0
YHH3_k127_10109741_1 Permeases of the drug metabolite transporter (DMT) superfamily - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 470.0
YHH3_k127_10133123_0 protein conserved in bacteria K11893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002289 415.0
YHH3_k127_10133435_0 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009426 488.0
YHH3_k127_10133435_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000059 235.0
YHH3_k127_10133435_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.00000000000000000000000000000000004432 136.0
YHH3_k127_1013899_0 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005658 499.0
YHH3_k127_1013899_1 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000001719 217.0
YHH3_k127_1016401_0 PFAM Type II secretion system protein E K02454 - - 1.296e-306 942.0
YHH3_k127_1016401_1 general secretion pathway protein D K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 466.0
YHH3_k127_1016401_2 General secretion pathway protein F K02455 - - 0.000000000000000000000000000000005065 128.0
YHH3_k127_10176338_0 synthase III K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004252 544.0
YHH3_k127_10176338_1 FMN binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 415.0
YHH3_k127_10176338_2 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 289.0
YHH3_k127_10176338_3 Butirosin biosynthesis protein H, N-terminal - - - 0.0000000000000000000000000000000000000000000000000000007817 197.0
YHH3_k127_10176338_4 Beta-ketoacyl synthase, N-terminal domain - - - 0.000000000000000000000000000001272 129.0
YHH3_k127_10176338_5 - - - - 0.0000000000000000000000002091 109.0
YHH3_k127_10178846_0 Belongs to the glycosyl hydrolase 13 family K01200 - 3.2.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 309.0
YHH3_k127_10178846_1 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.00000000000000000000000000000000000001638 148.0
YHH3_k127_10196178_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.0 1140.0
YHH3_k127_10196178_1 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 468.0
YHH3_k127_10196178_2 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000002549 186.0
YHH3_k127_10196963_0 Protein involved in outer membrane biogenesis - - - 1.229e-265 826.0
YHH3_k127_10196963_1 Na H antiporter - - - 3.566e-218 679.0
YHH3_k127_10196963_2 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008419 257.0
YHH3_k127_10214655_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 328.0
YHH3_k127_10214655_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 321.0
YHH3_k127_10226199_0 carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 464.0
YHH3_k127_10226199_1 carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007156 273.0
YHH3_k127_10226199_2 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002912 265.0
YHH3_k127_10226199_3 Beta-lactamase - - - 0.000000000000000000009368 94.0
YHH3_k127_10240535_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 8.804e-321 985.0
YHH3_k127_10240535_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 1.81e-244 760.0
YHH3_k127_10240535_2 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.000000001756 60.0
YHH3_k127_10245004_0 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 5e-324 992.0
YHH3_k127_10245004_1 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 350.0
YHH3_k127_10245004_2 Ferredoxin K00523,K04755,K08952,K08953,K08954,K18077 GO:0005575,GO:0005622,GO:0005623,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044464,GO:0046858 1.17.1.1 0.0000000000000000000000000000000000000000000000002307 176.0
YHH3_k127_10245004_3 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.0000000000000000000000000000000000000000001386 160.0
YHH3_k127_10245004_4 - - - - 0.0000000000000000000000000000000000000000167 154.0
YHH3_k127_10271051_0 TIGRFAM ATP-dependent helicase HrpA K03578 - 3.6.4.13 1.185e-303 935.0
YHH3_k127_10271051_1 Asparaginase K13051 - 3.4.19.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 534.0
YHH3_k127_10271051_2 Domain in cystathionine beta-synthase and other proteins. K07182 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006143 264.0
YHH3_k127_10274272_0 Belongs to the BI1 family K19416 - - 0.000000000000000000000000000000000000000000000000000000000000000000001562 236.0
YHH3_k127_10274272_1 TIGRFAM sulfur relay protein TusD DsrE K07235 GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0019417,GO:0044237,GO:0055114 - 0.00000000000000000000000000000000000000000000000000003853 190.0
YHH3_k127_10274272_2 Belongs to the DsrF TusC family K07236 - - 0.0000000000000000000000000000000000000000001378 161.0
YHH3_k127_1030990_0 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000000001257 181.0
YHH3_k127_1030990_1 acr, cog1565 - - - 0.000000000000000000000000000000000000000000000002173 190.0
YHH3_k127_10322696_0 Belongs to the ABC transporter superfamily K02031,K02032,K13896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004059 515.0
YHH3_k127_10322696_1 peptide transport system, permease K02034,K12370,K15582,K19228 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 502.0
YHH3_k127_10324572_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001102 257.0
YHH3_k127_10324572_1 Glycyl-tRNA synthetase beta subunit K01879 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.14 0.000000000000000000000000000000000000000000000000000000002056 201.0
YHH3_k127_10324572_2 - - - - 0.000000000000000000000000000000000000000000000000000001196 194.0
YHH3_k127_10328142_0 AlkA N-terminal domain K13529 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004558 515.0
YHH3_k127_10329022_0 Membrane dipeptidase (Peptidase family M19) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 428.0
YHH3_k127_10329022_1 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006226 339.0
YHH3_k127_10349903_0 Capsule polysaccharide K07266 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 306.0
YHH3_k127_10349903_1 Glycosyl transferase 4-like - - - 0.00000000000000000000004508 101.0
YHH3_k127_10359059_0 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 2903.0
YHH3_k127_10359059_1 Pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 357.0
YHH3_k127_10359059_2 Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation K01305 - - 0.00000000000000000000000000007321 117.0
YHH3_k127_10370415_0 PFAM Na H antiporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 458.0
YHH3_k127_10370415_1 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000665 354.0
YHH3_k127_10385523_0 Nicotinamide mononucleotide transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 358.0
YHH3_k127_10385523_1 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.000000000000000000000000000000000000000000000000000000000000009142 216.0
YHH3_k127_10385523_2 YKOF-related Family - - - 0.00000000000000000000000000000000000000002091 153.0
YHH3_k127_10396329_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 8.446e-278 862.0
YHH3_k127_10418819_0 TonB dependent receptor - - - 0.0 1193.0
YHH3_k127_10418819_1 - - - - 0.000003537 50.0
YHH3_k127_1042061_0 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 554.0
YHH3_k127_10459012_0 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 464.0
YHH3_k127_10468878_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 8.516e-218 679.0
YHH3_k127_10468878_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 286.0
YHH3_k127_10482587_0 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 302.0
YHH3_k127_10482587_1 Type II secretion system K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 288.0
YHH3_k127_10498027_0 COG0841 Cation multidrug efflux pump K03296,K18138 - - 9.687e-245 761.0
YHH3_k127_10498027_1 Natural resistance-associated macrophage protein K03322 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 434.0
YHH3_k127_10516004_0 PFAM Aminotransferase class-III - - - 6.047e-243 752.0
YHH3_k127_10516004_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 2.97e-239 747.0
YHH3_k127_10516004_2 arginine N-succinyltransferase K00673 - 2.3.1.109 3.693e-211 657.0
YHH3_k127_10516004_3 succinyldiaminopimelate aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 510.0
YHH3_k127_10516004_4 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 385.0
YHH3_k127_10516004_5 Transcriptional - - - 0.0000000000000000000000000000003241 125.0
YHH3_k127_10517719_0 Fe-S-cluster oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004046 387.0
YHH3_k127_10517719_1 Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 304.0
YHH3_k127_10524331_0 Peptidase, M28 - - - 3.082e-238 742.0
YHH3_k127_10524331_1 Smr protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006054 327.0
YHH3_k127_10524331_2 regulatory protein, arsR - - - 0.0000000000000000000000000000000000000000000000011 176.0
YHH3_k127_10524331_4 COG0784 FOG CheY-like receiver K03413 - - 0.000000000000000000000000000000000000002838 149.0
YHH3_k127_10561797_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 4.041e-204 637.0
YHH3_k127_10561797_1 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000003434 183.0
YHH3_k127_10561797_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000005603 78.0
YHH3_k127_10569963_0 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005596 580.0
YHH3_k127_10569963_1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 537.0
YHH3_k127_10583257_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0006950,GO:0006970,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009268,GO:0009409,GO:0009628,GO:0009651,GO:0009987,GO:0010467,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042802,GO:0043021,GO:0043023,GO:0043024,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0050896,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0 1167.0
YHH3_k127_10583257_1 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005893 318.0
YHH3_k127_10583257_2 PFAM Positive regulator of sigma(E), RseC MucC K03803 - - 0.000000000000000000000000001653 114.0
YHH3_k127_10584234_0 Parallel beta-helix repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 561.0
YHH3_k127_10584234_1 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009427 462.0
YHH3_k127_10584234_2 Signal transduction histidine kinase K07636 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0004721,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016021,GO:0016036,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031224,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0035556,GO:0036211,GO:0042578,GO:0042594,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071496,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.0000000000000000000000000000000000003865 142.0
YHH3_k127_10584755_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009138 285.0
YHH3_k127_10584755_1 Transcriptional regulatory protein, C terminal K02483,K07662 - - 0.000000000000000000000000000000000000000000000000000754 189.0
YHH3_k127_10586565_0 Receptor K02014 - - 0.0 1327.0
YHH3_k127_10586565_1 peptidase K01278 - 3.4.14.5 0.0 1308.0
YHH3_k127_10586565_2 Domain of unknown function (DUF3391) - - - 1.039e-218 683.0
YHH3_k127_10586565_3 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 GO:0003674,GO:0003824,GO:0004845,GO:0004849,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016763,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0042802,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 373.0
YHH3_k127_10586565_4 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001035 277.0
YHH3_k127_10589583_0 Type VI secretion protein, EvpB/VC_A0108, tail sheath K11899,K11900 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004431 359.0
YHH3_k127_10589583_1 ImpE protein K11898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000956 245.0
YHH3_k127_10614635_0 Cytochrome c-type biogenesis protein K02198 - - 0.0 999.0
YHH3_k127_10614635_1 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000000000000000000000000002366 233.0
YHH3_k127_10620165_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 574.0
YHH3_k127_10620165_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 503.0
YHH3_k127_10620165_10 Enoyl-(Acyl carrier protein) reductase K13938 - 1.5.1.3,1.5.1.50 0.0000000001375 61.0
YHH3_k127_10620165_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006176 435.0
YHH3_k127_10620165_3 phosphoesterase, PA-phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 292.0
YHH3_k127_10620165_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003541 274.0
YHH3_k127_10620165_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001236 267.0
YHH3_k127_10620165_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000009056 241.0
YHH3_k127_10620165_7 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.000000000000000000000000000000000000000000000000000001783 196.0
YHH3_k127_10620165_8 PFAM heat shock protein DnaJ domain protein K03686 - - 0.000000000000000000000000000000000000000000000001172 175.0
YHH3_k127_10620165_9 translation initiation factor activity - - - 0.0000000000000000000000009654 103.0
YHH3_k127_10636475_0 Phage late control gene D protein (GPD) K11904 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 490.0
YHH3_k127_10636475_1 PAAR motif - - - 0.000000000000000000000000000000000000000002888 156.0
YHH3_k127_10636475_2 TIGRFAM RHS repeat-associated core domain - - - 0.00000000000000000000000004968 114.0
YHH3_k127_10636475_3 - - - - 0.000000000001561 79.0
YHH3_k127_10650835_0 Catalyzes the formation of 5-methyl-uridine at position 747 (m5U747) in 23S rRNA K03212 - 2.1.1.189 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101 445.0
YHH3_k127_10650835_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000005659 176.0
YHH3_k127_10650835_2 OmpA-like transmembrane domain - - - 0.000000000000000000000000000000000000000007241 161.0
YHH3_k127_10655374_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 0.0 1134.0
YHH3_k127_10655374_1 Fatty acid cis/trans isomerase (CTI) - - - 1.325e-272 844.0
YHH3_k127_10664232_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0 1001.0
YHH3_k127_10664232_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 484.0
YHH3_k127_10666513_0 Double sensory domain of two-component sensor kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 438.0
YHH3_k127_10666513_1 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000384 377.0
YHH3_k127_10666513_2 Protein of unknown function (DUF2798) - - - 0.000000000000000000000000000008252 120.0
YHH3_k127_10667475_0 PFAM major facilitator superfamily MFS_1 K08218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 380.0
YHH3_k127_10667475_1 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.00000000000000000000000000000000000006691 142.0
YHH3_k127_1068366_0 ABC-type antimicrobial peptide transport system, permease component - - - 9.168e-280 882.0
YHH3_k127_10691098_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001727 255.0
YHH3_k127_10694444_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 3.674e-280 869.0
YHH3_k127_10694444_1 PFAM Isochorismatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 323.0
YHH3_k127_10694444_2 S1 P1 nuclease K05986 - 3.1.30.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 309.0
YHH3_k127_10694444_3 hydrolase - - - 0.0000000000000009667 78.0
YHH3_k127_10701846_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 1.914e-273 843.0
YHH3_k127_10701846_1 Selenocysteine lyase - - - 3.453e-217 678.0
YHH3_k127_10701846_2 COG0793 Periplasmic protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005998 552.0
YHH3_k127_10708025_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005831 332.0
YHH3_k127_10708025_1 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.00000000000000000000000000000000000000000000000000004743 189.0
YHH3_k127_10708025_2 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000002173 190.0
YHH3_k127_10708025_3 Domain of unknown function (DUF4331) - - - 0.000000000000000000000000000000000000000000004156 163.0
YHH3_k127_10708025_4 - - - - 0.0000000000000000000000000000000000000000005925 162.0
YHH3_k127_10719971_0 peptidase M24B X-Pro dipeptidase aminopeptidase domain protein K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 347.0
YHH3_k127_10719971_1 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002395 264.0
YHH3_k127_1074970_0 COG2057 Acyl CoA acetate 3-ketoacid CoA transferase beta subunit K01029 - 2.8.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 428.0
YHH3_k127_1074970_1 6-phosphogluconate dehydrogenase, NAD-binding K00020,K00042 - 1.1.1.31,1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 403.0
YHH3_k127_1074970_2 COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01028 - 2.8.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007059 358.0
YHH3_k127_1074970_3 Protein of unknown function (DUF2384) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007825 253.0
YHH3_k127_1074970_4 RES - - - 0.000000000000000000000000000000000000000000000000000000000000000001265 230.0
YHH3_k127_10787010_0 OmpA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 421.0
YHH3_k127_10795333_0 thiol oxidoreductase - - - 0.0 1849.0
YHH3_k127_10795333_1 PepSY-associated TM region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 554.0
YHH3_k127_10807433_0 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 576.0
YHH3_k127_10807433_1 START domain - - - 0.00000000000000000000000000000000000000000000000000000000003035 207.0
YHH3_k127_10807433_2 excinuclease, ATPase subunit - - - 0.000000000000000000000000000000000000000000000000000000000771 204.0
YHH3_k127_10807433_3 - - - - 0.0000000000000000000000000000000000000000000000000000001121 201.0
YHH3_k127_10825723_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 7.859e-256 796.0
YHH3_k127_10825723_1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 357.0
YHH3_k127_10825723_2 Efflux transporter, RND family, MFP subunit K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004595 307.0
YHH3_k127_10846559_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1163.0
YHH3_k127_10846559_1 PFAM Fructosamine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 466.0
YHH3_k127_10846559_2 PFAM Short-chain dehydrogenase reductase SDR K03793 - 1.5.1.33 0.000000000000000000000000000000000000000000000000000000000000001293 223.0
YHH3_k127_10848731_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005274 565.0
YHH3_k127_10848731_1 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 492.0
YHH3_k127_10848731_2 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 425.0
YHH3_k127_10848731_3 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000006361 169.0
YHH3_k127_10848731_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000005209 164.0
YHH3_k127_10852303_0 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005057 423.0
YHH3_k127_10852303_1 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000299 233.0
YHH3_k127_10852804_0 TonB dependent receptor - - - 0.0 1161.0
YHH3_k127_10852804_1 Beta-eliminating lyase K01620 - 4.1.2.48 1.884e-201 631.0
YHH3_k127_10852804_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 589.0
YHH3_k127_10853704_0 Predicted membrane protein (DUF2254) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006458 557.0
YHH3_k127_10853704_1 cellular response to heat K09807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 353.0
YHH3_k127_10853704_2 Protein of unknown function (DUF4199) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 284.0
YHH3_k127_10853704_3 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002295 249.0
YHH3_k127_10853704_4 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000004809 224.0
YHH3_k127_10853704_5 aminopeptidase - - - 0.0000000000000000008713 87.0
YHH3_k127_10859495_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 8.466e-264 818.0
YHH3_k127_10859495_1 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 465.0
YHH3_k127_10859495_2 Protein of unknown function (DUF2919) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002575 258.0
YHH3_k127_10859495_3 Protein of unknown function (DUF3392) - - - 0.0000000000000000000000000000000000000000000000000000000523 196.0
YHH3_k127_10860425_0 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 368.0
YHH3_k127_10860425_1 - - - - 0.0000000000000000000000000000001463 128.0
YHH3_k127_10860425_2 diguanylate cyclase - - - 0.000000000000000000000000002836 112.0
YHH3_k127_10866610_0 COG0823 Periplasmic component of the Tol biopolymer transport system - - - 0.0 1846.0
YHH3_k127_10877215_0 Belongs to the SAICAR synthetase family K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 5.256e-233 722.0
YHH3_k127_10877215_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000749 550.0
YHH3_k127_10877215_2 PFAM membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 450.0
YHH3_k127_10877215_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 296.0
YHH3_k127_10877215_4 histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002933 259.0
YHH3_k127_10877215_5 Acetyltransferase (GNAT) domain K03827 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000209 243.0
YHH3_k127_10877215_6 Putative adhesin - - - 0.0000000000000000000000001367 106.0
YHH3_k127_10880091_0 cytochrome oxidase assembly K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 563.0
YHH3_k127_10880091_1 PFAM cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006994 468.0
YHH3_k127_10880091_2 SURF1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 361.0
YHH3_k127_10880091_3 - - - - 0.0000000000000000000000209 106.0
YHH3_k127_10880091_4 Protein of unknown function (DUF2909) - - - 0.0000000000000000006789 88.0
YHH3_k127_10880091_5 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000001435 66.0
YHH3_k127_10884715_0 MlaA lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003022 256.0
YHH3_k127_10884715_1 exporters of the RND superfamily K07003 - - 0.000000000000000000000000000000000000000000000000000000000001027 217.0
YHH3_k127_10892427_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1623.0
YHH3_k127_10892427_1 TonB-dependent receptor plug K02014 - - 3.928e-235 733.0
YHH3_k127_10892427_2 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000003999 89.0
YHH3_k127_10900108_0 integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005875 556.0
YHH3_k127_10900108_1 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 442.0
YHH3_k127_10900108_2 Thiol disulfide interchange protein K03673 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004444 337.0
YHH3_k127_10900728_0 PFAM peptidase S9 prolyl oligopeptidase active site domain protein - - - 3.092e-231 715.0
YHH3_k127_10900728_1 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000001556 218.0
YHH3_k127_10900728_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000005706 81.0
YHH3_k127_10912586_0 AlkA N-terminal domain K13529 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003506 537.0
YHH3_k127_10918935_0 epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 307.0
YHH3_k127_10918935_1 COG0463 Glycosyltransferases involved in cell wall biogenesis K16702,K18788,K21366 - 2.4.1.122,2.4.1.303 0.0000000000000000000000001976 109.0
YHH3_k127_10924135_0 Na H antiporter K05559 - - 0.0 1148.0
YHH3_k127_10924135_1 PFAM NADH Ubiquinone plastoquinone K05561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005155 528.0
YHH3_k127_10924135_2 COG1006 Multisubunit Na H antiporter, MnhC subunit K00340,K05560,K05567 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000003254 200.0
YHH3_k127_10938190_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004717 305.0
YHH3_k127_10938190_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000007115 214.0
YHH3_k127_10938190_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000001206 137.0
YHH3_k127_10971453_0 PFAM Orn Lys Arg decarboxylase K01584 - 4.1.1.19 1.486e-228 707.0
YHH3_k127_10990771_0 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 4.057e-245 760.0
YHH3_k127_10990771_1 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000002354 259.0
YHH3_k127_10990771_2 Metal-dependent hydrolase K07043 - - 0.00000000000000000000000000000000000000000000000000000000737 202.0
YHH3_k127_1099560_0 Flavodoxin-like fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 341.0
YHH3_k127_1099560_1 Protein of unknown function (DUF3297) - - - 0.000000000000000000000000000000000000000016 153.0
YHH3_k127_1099560_2 Pirin K06911 - - 0.000000000000000000787 85.0
YHH3_k127_10999968_0 peptidase - - - 7.526e-248 766.0
YHH3_k127_10999968_1 Large-conductance mechanosensitive channel, MscL K03282 - - 0.000000000000000000000000000000000000000000000000000000000000000001327 228.0
YHH3_k127_11005072_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006001 488.0
YHH3_k127_11005072_1 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 GO:0003674,GO:0003824,GO:0003841,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016020,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042171,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071617,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007598 371.0
YHH3_k127_11005072_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000058 279.0
YHH3_k127_11005072_3 Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome K09893 GO:0003674,GO:0004857,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008428,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0019219,GO:0019222,GO:0019439,GO:0019899,GO:0030234,GO:0031323,GO:0031324,GO:0032069,GO:0032074,GO:0034641,GO:0034655,GO:0043086,GO:0043170,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0065007,GO:0065009,GO:0071704,GO:0080090,GO:0090304,GO:0098772,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000001104 223.0
YHH3_k127_11005352_0 Transcriptional regulator K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 510.0
YHH3_k127_11005352_1 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000409 442.0
YHH3_k127_11015975_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1223.0
YHH3_k127_11015975_1 - - - - 0.000000000000000000008136 92.0
YHH3_k127_11030449_0 Belongs to the peptidase M16 family K01407 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.24.55 3.358e-224 699.0
YHH3_k127_11030449_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00001965 48.0
YHH3_k127_11038284_0 COG0500 SAM-dependent methyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 532.0
YHH3_k127_11038284_1 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006682 501.0
YHH3_k127_11038284_2 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004844 244.0
YHH3_k127_11038284_3 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000006129 236.0
YHH3_k127_11038284_4 PFAM Thioredoxin K05838 - - 0.00000000000000000000000000001421 118.0
YHH3_k127_11042014_0 Endonuclease I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009045 572.0
YHH3_k127_11061280_0 PFAM Succinylglutamate desuccinylase Aspartoacylase K06987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008125 433.0
YHH3_k127_11061280_1 Protein of unknown function (DUF2884) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 388.0
YHH3_k127_11063785_0 Protein of unknown function (DUF1343) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 531.0
YHH3_k127_11063785_1 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.0000000000000000000000000000000000000000000000000000921 193.0
YHH3_k127_11066515_0 transcriptional regulatory protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 421.0
YHH3_k127_11066515_1 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000000000000000005126 203.0
YHH3_k127_11066515_2 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0000000000000000000000000000000002978 131.0
YHH3_k127_11088686_0 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 0.0 1349.0
YHH3_k127_11088686_1 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000002038 127.0
YHH3_k127_11088686_2 Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and or cell division K08304 GO:0000270,GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009279,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016787,GO:0016798,GO:0019867,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0043170,GO:0044425,GO:0044459,GO:0044462,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.000000000001678 69.0
YHH3_k127_11088686_3 - - - - 0.0000000000112 64.0
YHH3_k127_1108960_0 Histidine kinase K07636 - 2.7.13.3 0.0 1097.0
YHH3_k127_1108960_1 Belongs to the peptidase S8 family K14645 - - 0.0000006466 52.0
YHH3_k127_11097582_0 response regulator receiver - - - 0.0 1110.0
YHH3_k127_11097582_1 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 5.264e-228 713.0
YHH3_k127_11097582_2 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006246 443.0
YHH3_k127_11097582_3 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 355.0
YHH3_k127_11097582_4 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000000000000000000000000000000002778 201.0
YHH3_k127_11104344_0 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 322.0
YHH3_k127_11104344_1 Belongs to the UPF0246 family K09861 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0033194,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:1901700 - 0.000000000000000000000000000000000000000003996 155.0
YHH3_k127_11109683_0 UTP-glucose-1-phosphate uridylyltransferase K00963 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0003983,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005996,GO:0006011,GO:0006012,GO:0006073,GO:0006139,GO:0006629,GO:0006725,GO:0006793,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009056,GO:0009058,GO:0009059,GO:0009103,GO:0009225,GO:0009242,GO:0009244,GO:0009250,GO:0009311,GO:0009312,GO:0009987,GO:0016043,GO:0016051,GO:0016052,GO:0016740,GO:0016772,GO:0016779,GO:0019318,GO:0019320,GO:0019388,GO:0022607,GO:0033499,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043933,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046377,GO:0046401,GO:0046483,GO:0046872,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051748,GO:0055086,GO:0065003,GO:0070569,GO:0071704,GO:0071840,GO:1900725,GO:1900727,GO:1901135,GO:1901137,GO:1901360,GO:1901575,GO:1901576,GO:1903509 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000203 271.0
YHH3_k127_11109683_1 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005 246.0
YHH3_k127_11128696_0 PFAM Band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 570.0
YHH3_k127_11128696_1 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 575.0
YHH3_k127_11128696_2 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000001627 248.0
YHH3_k127_11128696_3 NfeD-like C-terminal, partner-binding K07340 - - 0.00000000000000000000000000000000000000000000000000000000000000000003505 233.0
YHH3_k127_11128696_4 Membrane fusogenic activity K09806 - - 0.0000000000000000000000000000000000000000009695 158.0
YHH3_k127_11133648_0 HELICc2 - - - 0.0009364 50.0
YHH3_k127_11134678_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 540.0
YHH3_k127_11134678_1 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008434 361.0
YHH3_k127_11134678_2 protein conserved in bacteria K09974 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006088 326.0
YHH3_k127_11134678_3 Binding-protein-dependent transport system inner membrane component K02025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 300.0
YHH3_k127_11134678_4 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000002257 181.0
YHH3_k127_11134678_5 Thiol disulfide interchange protein K03673 - - 0.00000000000000000000000000000000000000000000000008905 184.0
YHH3_k127_11134678_6 Carbohydrate ABC transporter membrane protein 2, CUT1 family K02026 - - 0.000000000000000000000000000000000000000005693 171.0
YHH3_k127_1113651_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.0 1241.0
YHH3_k127_1113651_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 555.0
YHH3_k127_1113651_2 Acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 395.0
YHH3_k127_11138673_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008916 350.0
YHH3_k127_11180152_0 Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 608.0
YHH3_k127_11180152_1 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007751 512.0
YHH3_k127_11180152_2 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964 - 4.2.1.109 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 389.0
YHH3_k127_11180152_3 Carbon-nitrogen hydrolase K11206,K13566 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0044464,GO:0050152,GO:0071944,GO:0106008 3.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005191 336.0
YHH3_k127_11180152_4 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 324.0
YHH3_k127_11180152_5 Metal-dependent hydrolase K07043 - - 0.0000000000003986 68.0
YHH3_k127_11180152_6 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 GO:0000096,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0010309,GO:0016491,GO:0016701,GO:0016702,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0051213,GO:0055114,GO:0071704,GO:1901564,GO:1901605 1.13.11.53,1.13.11.54 0.00000008021 59.0
YHH3_k127_1118309_0 TIGRFAM ATP phosphoribosyltransferase, C-terminal domain K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 568.0
YHH3_k127_1118309_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000961 340.0
YHH3_k127_11183525_0 aminotransferase K00813,K00832 - 2.6.1.1,2.6.1.57 4.335e-247 764.0
YHH3_k127_11183525_1 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005997 342.0
YHH3_k127_11183525_2 COG1956 GAF domain-containing protein - - - 0.0000000000000000000001651 96.0
YHH3_k127_11201965_0 thiol oxidoreductase - - - 0.0 1621.0
YHH3_k127_11201965_1 Uncharacterised MFS-type transporter YbfB K19577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 526.0
YHH3_k127_11201965_2 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 435.0
YHH3_k127_11201965_3 signal transduction protein with EFhand domain - - - 0.000000000000000000000000000000000000000002642 156.0
YHH3_k127_11201965_4 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.0009684 46.0
YHH3_k127_11218552_0 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0 1275.0
YHH3_k127_11218552_1 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004147 351.0
YHH3_k127_11218552_2 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001449 247.0
YHH3_k127_11218552_3 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000001244 194.0
YHH3_k127_11218552_4 Domain of unknown function (DUF4394) - - - 0.0000000000000000000000000000007466 128.0
YHH3_k127_1122723_0 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 506.0
YHH3_k127_1122723_1 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 380.0
YHH3_k127_1122723_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006473 285.0
YHH3_k127_11228718_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 4.363e-209 653.0
YHH3_k127_11228718_1 Signal transducing histidine kinase, homodimeric K03407 - 2.7.13.3 1.696e-205 640.0
YHH3_k127_11228718_2 MotA/TolQ/ExbB proton channel family K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004779 247.0
YHH3_k127_11228718_3 PFAM OmpA MotB domain protein K02557 - - 0.00000000000003154 72.0
YHH3_k127_11247698_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 6.483e-278 860.0
YHH3_k127_11247698_1 Peptidoglycan polymerase that is essential for cell division K03588 - - 1.855e-224 699.0
YHH3_k127_11247698_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 1.604e-221 692.0
YHH3_k127_11247698_3 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008051 543.0
YHH3_k127_11247698_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006266 519.0
YHH3_k127_11247698_5 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 434.0
YHH3_k127_11247698_6 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008953 438.0
YHH3_k127_11247698_7 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000001074 162.0
YHH3_k127_11268618_0 EVE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001136 253.0
YHH3_k127_11268618_1 Acyl-CoA thioesterase K10805 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006629,GO:0006631,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016042,GO:0016054,GO:0016289,GO:0016787,GO:0016788,GO:0016790,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0042802,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0046483,GO:0047617,GO:0051186,GO:0055086,GO:0071704,GO:0072329,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000001345 239.0
YHH3_k127_11272909_0 AcrB/AcrD/AcrF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008578 571.0
YHH3_k127_11272909_1 Citrate transporter - - - 0.0000000000000000000000000001594 116.0
YHH3_k127_1129655_0 COG0438 Glycosyltransferase - - - 0.000000000000000000000000000000000000000000000000000002707 205.0
YHH3_k127_11305762_0 PFAM binding-protein-dependent transport systems inner membrane component K02038 - - 2.812e-264 817.0
YHH3_k127_11305762_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007114 327.0
YHH3_k127_11305762_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000002218 218.0
YHH3_k127_11307430_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 7.04e-254 790.0
YHH3_k127_11307430_1 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 344.0
YHH3_k127_11307430_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 318.0
YHH3_k127_1130801_0 pfam abc K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 571.0
YHH3_k127_1130801_1 Class II Aldolase and Adducin N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006648 277.0
YHH3_k127_1130801_2 PFAM binding-protein-dependent transport systems inner membrane component K02050 - - 0.000000000000000000001446 93.0
YHH3_k127_11321221_0 Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate K00899 - 2.7.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000329 469.0
YHH3_k127_11321221_1 signal transduction protein containing sensor and EAL domains - - - 0.00000000000000002337 90.0
YHH3_k127_11361593_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0 1415.0
YHH3_k127_11361593_1 Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP) K06957 - 2.3.1.193 1.565e-265 833.0
YHH3_k127_11361593_10 Protein of unknown function, DUF484 K09921 - - 0.0000000000000000000000000000000000459 145.0
YHH3_k127_11361593_2 Fungal trichothecene efflux pump (TRI12) - - - 3.445e-227 707.0
YHH3_k127_11361593_3 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 557.0
YHH3_k127_11361593_4 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 542.0
YHH3_k127_11361593_5 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 507.0
YHH3_k127_11361593_6 hydrolase (HAD superfamily) K20862 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006766,GO:0006767,GO:0006771,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0018130,GO:0022611,GO:0032502,GO:0034641,GO:0042364,GO:0042578,GO:0042726,GO:0042727,GO:0043167,GO:0043169,GO:0043726,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.1.3.102,3.1.3.104 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004735 380.0
YHH3_k127_11361593_7 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000664 290.0
YHH3_k127_11361593_8 DoxX K15977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005329 253.0
YHH3_k127_11385111_0 - - - - 0.0000000000000000000000000000003544 128.0
YHH3_k127_11397815_0 integral membrane protein - - - 3.069e-238 741.0
YHH3_k127_11397815_1 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 492.0
YHH3_k127_11397815_2 type III effector - - - 0.0000000000000000000000000000000000000000000000000000000001108 206.0
YHH3_k127_11397815_3 AlkA N-terminal domain K13529 - 3.2.2.21 0.000000000000000000007484 94.0
YHH3_k127_1140067_0 COG1956 GAF domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001619 243.0
YHH3_k127_1140067_1 Translation Initiation Factor K03113 GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0002190,GO:0002192,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0110017,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000002104 220.0
YHH3_k127_11403346_0 Metal dependent phosphohydrolases with conserved 'HD' motif. K01129 - 3.1.5.1 2.639e-250 778.0
YHH3_k127_11403346_1 PepSY-associated TM region - - - 7.265e-233 722.0
YHH3_k127_11403346_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000002743 235.0
YHH3_k127_11403346_11 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.00000000000000000000000000000000000000000000000000000000001044 223.0
YHH3_k127_11403346_12 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000005305 199.0
YHH3_k127_11403346_13 Esterase PHB depolymerase K03932 - - 0.000000000003355 78.0
YHH3_k127_11403346_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 556.0
YHH3_k127_11403346_3 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000875 490.0
YHH3_k127_11403346_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 486.0
YHH3_k127_11403346_5 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 472.0
YHH3_k127_11403346_6 pfam abc - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006871 368.0
YHH3_k127_11403346_7 HAD-hyrolase-like K01838,K19270 GO:0000287,GO:0003674,GO:0003824,GO:0003850,GO:0004346,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0050084,GO:0050286,GO:0050308,GO:0050309 3.1.3.23,5.4.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 351.0
YHH3_k127_11403346_8 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07693 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 344.0
YHH3_k127_11403346_9 ABC-2 family transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006922 323.0
YHH3_k127_114223_0 Y_Y_Y domain - - - 1.05e-252 792.0
YHH3_k127_11423450_0 protein conserved in bacteria - - - 0.0 1035.0
YHH3_k127_11423450_1 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003158 422.0
YHH3_k127_11423450_2 Bacterial protein of unknown function (DUF924) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009407 287.0
YHH3_k127_11423450_3 Proteolipid membrane potential modulator - - - 0.0000000000000000000000000242 109.0
YHH3_k127_11423450_4 protein-S-isoprenylcysteine methyltransferase - - - 0.0000000003165 62.0
YHH3_k127_11451576_0 Zinc-dependent metalloprotease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000242 262.0
YHH3_k127_11451576_1 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000002246 237.0
YHH3_k127_114519_0 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 531.0
YHH3_k127_114519_1 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 348.0
YHH3_k127_114519_2 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002492 268.0
YHH3_k127_114519_3 signal transduction protein with a C-terminal ATPase domain K08082 - 2.7.13.3 0.000000000000000000000000000000000000004884 149.0
YHH3_k127_114519_5 protein conserved in bacteria - - - 0.000000000000000000000004041 105.0
YHH3_k127_11453640_0 Flavodoxin K00380 - 1.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002766 610.0
YHH3_k127_11453640_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 599.0
YHH3_k127_11453640_2 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 GO:0000270,GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0003977,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006629,GO:0006725,GO:0006793,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009225,GO:0009226,GO:0009252,GO:0009273,GO:0009987,GO:0016051,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0018130,GO:0019134,GO:0019438,GO:0030203,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0042546,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0046872,GO:0055086,GO:0070569,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903509 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 392.0
YHH3_k127_11453640_3 Protein of unknown function (DUF1439) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003914 279.0
YHH3_k127_11465199_0 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 326.0
YHH3_k127_11465199_1 glycosyl transferase K01181,K13668 - 2.4.1.346,3.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004899 324.0
YHH3_k127_11465199_2 Acyltransferase family K21005 - - 0.00000000000000000000000000000001222 140.0
YHH3_k127_11465199_3 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000006541 92.0
YHH3_k127_11465199_4 Polysaccharide biosynthesis protein - - - 0.00000000004947 66.0
YHH3_k127_11472812_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 569.0
YHH3_k127_11472812_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003894 344.0
YHH3_k127_11472812_2 2OG-Fe(II) oxygenase superfamily K07394 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004877 310.0
YHH3_k127_11475213_0 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 1.423e-308 965.0
YHH3_k127_11475213_1 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 1.098e-220 696.0
YHH3_k127_11475213_2 COG2863 Cytochrome c553 - - - 0.000000000000000000000000000000000000000003535 163.0
YHH3_k127_11475213_3 Endoribonuclease L-PSP - - - 0.0000000000002651 72.0
YHH3_k127_11478232_0 Glycosyl hydrolase family 115 - - - 0.0 1073.0
YHH3_k127_11478232_1 Glycosyl hydrolases family 43 K01198,K01209 - 3.2.1.37,3.2.1.55 7.594e-203 646.0
YHH3_k127_11478232_2 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 520.0
YHH3_k127_11478232_3 Periplasmic binding protein-like domain K02529 GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 468.0
YHH3_k127_11478232_4 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0004801,GO:0016740,GO:0016744 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 365.0
YHH3_k127_11478232_5 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 354.0
YHH3_k127_11478232_6 PFAM Major Facilitator Superfamily - - - 0.00000000000000003524 81.0
YHH3_k127_11506082_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 523.0
YHH3_k127_11506082_1 Chromate transporter K07240 - - 0.0001088 45.0
YHH3_k127_11517518_0 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0033554,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0050896,GO:0051716,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009465 386.0
YHH3_k127_11517518_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000105,GO:0000107,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.0000000000000000000000000000000000000000000000000000003903 194.0
YHH3_k127_11524680_0 Belongs to the bacterial flagellin family K02397 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 342.0
YHH3_k127_11524888_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 3.324e-204 636.0
YHH3_k127_11524888_1 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate K03473 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0033711,GO:0034641,GO:0036001,GO:0036094,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.290 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 585.0
YHH3_k127_11531176_0 Prolyl oligopeptidase family - - - 0.0 1224.0
YHH3_k127_11531176_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298 - 1.10.3.10,1.9.3.1 0.0 1047.0
YHH3_k127_11531176_2 COG1622 Heme copper-type cytochrome quinol oxidases, subunit 2 K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 569.0
YHH3_k127_11531176_3 Histidine kinase K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000963 399.0
YHH3_k127_11531176_4 COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3 K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 374.0
YHH3_k127_11531176_5 CBS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006157 310.0
YHH3_k127_11531176_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002918 268.0
YHH3_k127_11531176_7 Transcriptional regulatory protein, C terminal K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008636 254.0
YHH3_k127_11531176_8 Heme copper-type cytochrome quinol oxidase subunit 3 K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000006265 206.0
YHH3_k127_11531176_9 Prokaryotic Cytochrome C oxidase subunit IV - - - 0.000000000000000000000000000000000000688 141.0
YHH3_k127_11542217_0 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 590.0
YHH3_k127_11542217_1 Protein of unknown function (DUF2726) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 350.0
YHH3_k127_11542217_2 Chemotaxis sensory transducer K03776 - - 0.00000000000000000000000000000000000000000000009341 169.0
YHH3_k127_11550226_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.248e-256 793.0
YHH3_k127_11550226_1 DeoR C terminal sensor domain K02444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006781 458.0
YHH3_k127_11550226_2 Flavodoxin K00380 - 1.8.1.2 0.00000000000000000000000000000000001457 141.0
YHH3_k127_11556453_0 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003991 307.0
YHH3_k127_11556453_1 DNA polymerase III K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000002597 254.0
YHH3_k127_11571592_0 TIGRFAM RHS repeat-associated core domain - - - 2.401e-305 943.0
YHH3_k127_11578748_0 Diguanylate cyclase - - - 3.203e-266 845.0
YHH3_k127_11578748_1 amidohydrolase - - - 0.000000000000001769 77.0
YHH3_k127_11583384_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 436.0
YHH3_k127_11583384_1 Belongs to the TrpC family K13498 GO:0000162,GO:0003674,GO:0003824,GO:0004425,GO:0004640,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.48,5.3.1.24 0.00000000000000000000000000000000000000001669 158.0
YHH3_k127_11584585_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 326.0
YHH3_k127_11587443_0 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082 428.0
YHH3_k127_11587443_1 Histidine Phosphotransfer domain - - - 0.00000000008721 70.0
YHH3_k127_11587443_2 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor - - - 0.00000294 51.0
YHH3_k127_11593921_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 4.5e-268 827.0
YHH3_k127_11593921_1 helical bimodular (HBM) domain K03406 - - 1.024e-238 747.0
YHH3_k127_11593921_2 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000000000000003301 170.0
YHH3_k127_11612836_0 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000692 580.0
YHH3_k127_11612836_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 530.0
YHH3_k127_11612836_2 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002636 465.0
YHH3_k127_11612836_3 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003348 312.0
YHH3_k127_11612836_4 Transcriptional regulator PadR-like family K10947 - - 0.00000000000000000000000000000000000000000000000000007287 188.0
YHH3_k127_11612836_5 - - - - 0.0000000000000000000000000000000000000000000000756 173.0
YHH3_k127_11612836_6 - - - - 0.00000000000000000000000000000000000001866 146.0
YHH3_k127_11618212_0 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 393.0
YHH3_k127_11618212_1 MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004409 338.0
YHH3_k127_11618212_2 amino acid transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006489 252.0
YHH3_k127_11618212_3 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000005112 177.0
YHH3_k127_11618212_4 Biopolymer transport protein ExbD/TolR K03559 - - 0.0000000000000000000000000000006786 126.0
YHH3_k127_11618212_5 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000002176 113.0
YHH3_k127_11619208_0 Acyltransferase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 504.0
YHH3_k127_11619208_1 Acyltransferase - - - 0.00000000000000000000000000000000000001222 144.0
YHH3_k127_11634665_0 Membrane protease subunits, stomatin prohibitin homologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 493.0
YHH3_k127_11634665_1 Membrane transport protein K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001034 264.0
YHH3_k127_11634665_2 mechanosensitive ion channel K05802 - - 0.0000000000000000000000005766 105.0
YHH3_k127_11634665_3 protein conserved in bacteria - - - 0.000000000000000000001995 94.0
YHH3_k127_11662547_0 phosphohistidine phosphatase K08296 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001595 278.0
YHH3_k127_11662547_1 PFAM Smr - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002177 260.0
YHH3_k127_11662547_2 Middle or third domain of peptidase_M16 - - - 0.0000000000000000000000000000000000000000000000000000000000000006769 220.0
YHH3_k127_11669770_0 conserved secreted or membrane protein precursor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006517 345.0
YHH3_k127_11669770_1 - - - - 0.0000000000000000000001539 98.0
YHH3_k127_11669770_2 - - - - 0.0000000000003698 73.0
YHH3_k127_11669770_3 amino acid transport K01713,K02029,K02030,K09997,K10014 - 4.2.1.51,4.2.1.91 0.000000007829 64.0
YHH3_k127_11675867_0 COG1566 Multidrug resistance efflux pump K03543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 410.0
YHH3_k127_11675867_1 Protein of unknown function (DUF2955) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005664 350.0
YHH3_k127_11675867_2 Transcription regulator that can specifically activate or repress expression of target genes K06075 GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031333,GO:0031334,GO:0043254,GO:0044087,GO:0044089,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2000144,GO:2001141 - 0.00000000000000000000000000000000000008971 147.0
YHH3_k127_11683087_0 Hydrophobe Amphiphile Efflux-1 (HAE1) K18138 - - 3.341e-287 885.0
YHH3_k127_11700944_0 Esterase PHB depolymerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 595.0
YHH3_k127_11716890_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0 1004.0
YHH3_k127_11716890_1 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.0000000000000004765 78.0
YHH3_k127_1173460_0 MatE K03327 - - 2.131e-247 768.0
YHH3_k127_1173460_1 riboflavin synthase, alpha subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005956 352.0
YHH3_k127_1173460_2 Cysteine-rich CPXCG - - - 0.000000000000000000000000000000006616 128.0
YHH3_k127_1173460_3 PFAM Short-chain dehydrogenase reductase SDR K03793 - 1.5.1.33 0.00000000000000000000000000000002722 127.0
YHH3_k127_1177938_0 MltA-interacting protein MipA K07274 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 412.0
YHH3_k127_1177938_1 Esterase PHB depolymerase - - - 0.00000000000000000000000000000000000000000000000000000000000000007782 224.0
YHH3_k127_1177938_2 - - - - 0.00000000000002302 76.0
YHH3_k127_11784783_0 TIGRFAM DNA topoisomerase III K03169 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006035 472.0
YHH3_k127_11784783_1 - - - - 0.00000000000000000000000000000000000000000000000001235 183.0
YHH3_k127_1179766_0 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 430.0
YHH3_k127_1179766_1 Fe-S protein K06938 - - 0.0000000000000000000000000000000000000000111 154.0
YHH3_k127_11798622_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 2.962e-248 773.0
YHH3_k127_11798622_1 AAA ATPase, central domain protein K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 283.0
YHH3_k127_11798622_2 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000000000000000000000000000000000000002549 221.0
YHH3_k127_11798622_3 part of a sulfur-relay system K11179 - - 0.000000000000000000000000000000000000000000000000000007728 191.0
YHH3_k127_11798622_4 DsrH like protein - - - 0.00000000000000000003223 91.0
YHH3_k127_11818393_0 PFAM peptidase M2, peptidyl-dipeptidase A K01283 - 3.4.15.1 0.0 1162.0
YHH3_k127_11818393_1 ABC transporter transmembrane region K06147 - - 6.075e-273 843.0
YHH3_k127_11818393_2 sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 368.0
YHH3_k127_11818393_3 PAS domain - - - 0.000000000000000000000000000000000002473 141.0
YHH3_k127_1181925_0 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006419 447.0
YHH3_k127_1181925_2 - - - - 0.0000000000000000000002633 97.0
YHH3_k127_11824956_0 Transcriptional regulator K13634 - - 4.979e-206 641.0
YHH3_k127_11824956_1 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000972 430.0
YHH3_k127_11824956_2 Bacterial extracellular solute-binding proteins, family 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 378.0
YHH3_k127_11824956_3 Histidine kinase-like ATPases - - - 0.00000000002951 63.0
YHH3_k127_11858756_0 Diguanylate cyclase - - - 0.0 1324.0
YHH3_k127_11858756_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007698 359.0
YHH3_k127_11873656_0 EamA-like transporter family K15269 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005979 329.0
YHH3_k127_11873656_1 Uracil phosphoribosyltransferase K00761 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000001582 261.0
YHH3_k127_11873656_2 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family K00354,K10680 - 1.6.99.1 0.000000000000000000000000000000000001213 147.0
YHH3_k127_11873722_0 COG0620 Methionine synthase II (cobalamin-independent) K00549 - 2.1.1.14 6.717e-204 637.0
YHH3_k127_11873722_1 Domain of unknown function (DUF1852) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000451 518.0
YHH3_k127_11873722_2 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000000002151 152.0
YHH3_k127_11874105_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.0 1405.0
YHH3_k127_11874105_1 PFAM Phosphoglycerate mutase - - - 0.00000000000000000000000000000000000000005799 153.0
YHH3_k127_11874105_2 Bacterial extracellular solute-binding proteins, family 3 - - - 0.0000000000000000000000000000004823 132.0
YHH3_k127_11874208_0 Protein of unknown function (DUF3584) - - - 0.0 1555.0
YHH3_k127_11874208_1 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle - - - 4.926e-237 736.0
YHH3_k127_11874208_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009957 389.0
YHH3_k127_11874208_3 Protein of unknown function (DUF1375) - - - 0.00000000000000000000000000003072 116.0
YHH3_k127_11875171_0 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 1.543e-253 785.0
YHH3_k127_11875171_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000006883 234.0
YHH3_k127_11881573_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 489.0
YHH3_k127_11881573_1 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000001454 238.0
YHH3_k127_11881573_2 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.0000000000000000000000000000000000000000000000000000000000000000001731 231.0
YHH3_k127_11888595_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 495.0
YHH3_k127_11888595_1 Belongs to the D-glutamate cyclase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005672 370.0
YHH3_k127_11892488_0 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004339 267.0
YHH3_k127_11892488_1 TonB-dependent receptor plug K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005301 249.0
YHH3_k127_11892488_2 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000000000001172 221.0
YHH3_k127_11905697_0 Belongs to the peptidase S16 family - - - 0.0 1034.0
YHH3_k127_11905697_1 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000572 216.0
YHH3_k127_11907555_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K02484,K07644 GO:0003674,GO:0003824,GO:0004672,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0033554,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 9.367e-282 869.0
YHH3_k127_11907555_1 Transcriptional regulatory protein, C terminal K07665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 346.0
YHH3_k127_11907555_2 multicopper oxidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007438 241.0
YHH3_k127_11907555_3 MltA-interacting MipA family protein - - - 0.0004827 44.0
YHH3_k127_11937087_0 TIGRFAM Penicillin-binding protein 1C K05367 - 2.4.1.129 0.0 1271.0
YHH3_k127_11937087_1 PFAM Alpha-2-macroglobulin K06894 - - 0.0 1253.0
YHH3_k127_11937087_2 Amidohydrolase family - - - 0.00000004475 55.0
YHH3_k127_11938523_0 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 476.0
YHH3_k127_11938523_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03214 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000005101 209.0
YHH3_k127_11950802_0 alkaline phosphatase - - - 0.0 1065.0
YHH3_k127_11952047_0 Belongs to the flagella basal body rod proteins family K02392 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 423.0
YHH3_k127_11952047_1 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001869 260.0
YHH3_k127_11952047_2 Flagellar basal body rod protein K02391 - - 0.000000000000000000000000000000000000000000000000000000000000000005118 229.0
YHH3_k127_11952047_3 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.0000000000000001177 80.0
YHH3_k127_11953119_0 - K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000924 321.0
YHH3_k127_11953119_1 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 330.0
YHH3_k127_11953119_2 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002791 249.0
YHH3_k127_11956580_0 PFAM Glucose Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 553.0
YHH3_k127_11956580_1 PFAM Amino acid-binding ACT K03567 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 299.0
YHH3_k127_11956580_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002088 270.0
YHH3_k127_11956580_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000001083 114.0
YHH3_k127_11958622_0 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 437.0
YHH3_k127_11958622_1 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005219 264.0
YHH3_k127_11958622_2 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000000000002018 244.0
YHH3_k127_11958622_3 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000000000000000000000000000002455 198.0
YHH3_k127_11959413_0 Secretin N-terminal domain K12282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 586.0
YHH3_k127_11959413_1 carbon utilization - - - 0.0000000001004 63.0
YHH3_k127_1196418_0 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 1.131e-284 886.0
YHH3_k127_1196418_1 COGs COG4299 conserved - - - 1.924e-207 649.0
YHH3_k127_1196418_2 Nucleoside H+ symporter K05820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 540.0
YHH3_k127_1196418_3 Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 414.0
YHH3_k127_1196418_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 385.0
YHH3_k127_11967477_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 2.679e-195 610.0
YHH3_k127_11967477_1 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 569.0
YHH3_k127_11967477_2 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.0000000000000000000000000000000000000000000000000000000000005526 226.0
YHH3_k127_11974024_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005227 594.0
YHH3_k127_11974024_1 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 543.0
YHH3_k127_11974024_2 TIGRFAM glutamine amidotransferase of anthranilate synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 347.0
YHH3_k127_11974024_3 Belongs to the TrpC family K01609,K13498 GO:0000162,GO:0003674,GO:0003824,GO:0004425,GO:0004640,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.48,5.3.1.24 0.000000000000000000005131 94.0
YHH3_k127_1197416_0 Peptidase M14, carboxypeptidase A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006559 501.0
YHH3_k127_1197416_1 The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters K02170 - 3.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 335.0
YHH3_k127_1197416_2 Competence protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004284 250.0
YHH3_k127_1197416_3 COG1749 Flagellar hook protein FlgE - - - 0.0000000000000000000000000000000000006565 141.0
YHH3_k127_1197416_4 SprA-related family - - - 0.0000000000000000000004916 96.0
YHH3_k127_11984047_0 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007539 518.0
YHH3_k127_11984047_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003973 280.0
YHH3_k127_11984047_2 PFAM HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002725 238.0
YHH3_k127_11984047_3 Glutathione S-transferase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000007379 232.0
YHH3_k127_11984047_4 protein conserved in bacteria K09975 - - 0.00000000000000000000000000000000000000000000000000000002588 202.0
YHH3_k127_11984047_5 COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases - - - 0.0000000000000000000000000000000000000000000000000000004711 206.0
YHH3_k127_11984047_6 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000001882 198.0
YHH3_k127_11984047_7 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 GO:0001098,GO:0001108,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042802,GO:0043254,GO:0044087,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.000003469 58.0
YHH3_k127_11988620_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 5.6e-322 988.0
YHH3_k127_11997011_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 2.194e-219 681.0
YHH3_k127_12000548_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 1.055e-250 777.0
YHH3_k127_12000548_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 555.0
YHH3_k127_12000548_2 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000000000000001395 174.0
YHH3_k127_12000548_3 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 GO:0000003,GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0019954,GO:0022402,GO:0022414,GO:0031224,GO:0031226,GO:0032153,GO:0032505,GO:0043093,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0071944 - 0.000000000000000000012 96.0
YHH3_k127_12005462_0 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07661 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000524 442.0
YHH3_k127_12005462_1 Histidine kinase K02484 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000001024 239.0
YHH3_k127_12022589_0 O-Antigen ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000007315 235.0
YHH3_k127_12040744_0 Domain of unknown function (DUF4010) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 602.0
YHH3_k127_12040744_1 PFAM YaeQ - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007966 335.0
YHH3_k127_12040744_2 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000154 273.0
YHH3_k127_12040744_3 - - - - 0.000001559 53.0
YHH3_k127_12064472_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 9.632e-195 609.0
YHH3_k127_12064472_1 PFAM Major Facilitator Superfamily - - - 0.0000000000000000001491 89.0
YHH3_k127_12079237_0 Controls the transcription of genes involved in arginine and lysine metabolism K05596 GO:0003674,GO:0003676,GO:0003677,GO:0003681,GO:0003700,GO:0005488,GO:0006275,GO:0006355,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032297,GO:0043565,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0090329,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000104,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 312.0
YHH3_k127_12079237_1 LysE type translocator K06895 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003261 243.0
YHH3_k127_12084016_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 1.033e-240 746.0
YHH3_k127_12084016_1 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 GO:0003674,GO:0003824,GO:0004149,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0008289,GO:0009060,GO:0009987,GO:0015980,GO:0016417,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016751,GO:0016999,GO:0017144,GO:0019752,GO:0031405,GO:0031406,GO:0032991,GO:0033293,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045333,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:0140096,GO:1901363,GO:1901681,GO:1902494,GO:1990204,GO:1990234 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 597.0
YHH3_k127_12084016_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005605 578.0
YHH3_k127_12084016_3 transcriptional regulator K06211 GO:0000166,GO:0000287,GO:0000309,GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005524,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009268,GO:0009435,GO:0009628,GO:0009987,GO:0010035,GO:0010038,GO:0010446,GO:0016043,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0022607,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043565,GO:0043933,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0046872,GO:0050896,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051716,GO:0055086,GO:0065003,GO:0070566,GO:0070887,GO:0071241,GO:0071248,GO:0071704,GO:0071840,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990837 2.7.1.22,2.7.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006401 410.0
YHH3_k127_12107209_0 Iron-containing alcohol dehydrogenase K08325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 394.0
YHH3_k127_12107209_1 SCO1/SenC K07152 - - 0.0000000000000000000000000000000000000002499 158.0
YHH3_k127_12107209_2 COG0457 FOG TPR repeat - - - 0.00000000000000001839 83.0
YHH3_k127_12108600_0 COG1404 Subtilisin-like serine proteases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 469.0
YHH3_k127_12108600_1 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000005288 72.0
YHH3_k127_12109850_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 6.951e-253 788.0
YHH3_k127_12109850_1 signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 349.0
YHH3_k127_12109850_2 Domain of unknown function (DUF1840) - - - 0.000000000000000000000000000000000000000008045 157.0
YHH3_k127_12115582_0 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 3.876e-245 760.0
YHH3_k127_12115582_1 Protein of unknown function (DUF2384) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 291.0
YHH3_k127_12115582_2 Membrane transport protein K07088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004702 241.0
YHH3_k127_12115582_3 Endonuclease containing a URI domain K07461 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.0000000000000000000000000000000001616 134.0
YHH3_k127_12115582_4 RES domain-containing protein - - - 0.0000002924 53.0
YHH3_k127_12116234_0 SapC - - - 0.0000000000000000000000000000000000000000002747 166.0
YHH3_k127_12116234_1 Tryptophan halogenase K14266 - 1.14.19.9 0.00000000000000000000299 96.0
YHH3_k127_12116234_2 Tryptophan halogenase K14266 - 1.14.19.9 0.0000000000000000000123 94.0
YHH3_k127_12117414_0 Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate - - - 1.423e-258 800.0
YHH3_k127_12117414_1 Arginine N-succinyltransferase beta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 503.0
YHH3_k127_12126177_0 surface antigen - - - 0.00000000000000000000000000000000000000000000002207 183.0
YHH3_k127_1213727_0 PFAM ABC transporter K06158 - - 0.0 1073.0
YHH3_k127_1213727_1 Protein of unknown function (DUF2390) - - - 0.00000000000000000000000000000000000000000000000001099 185.0
YHH3_k127_12139279_0 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 418.0
YHH3_k127_12139279_1 TonB dependent receptor K16088 - - 0.0000000000000000003696 92.0
YHH3_k127_12140735_0 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 332.0
YHH3_k127_12140735_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000008685 226.0
YHH3_k127_12141005_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 6.002e-274 845.0
YHH3_k127_12160569_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 326.0
YHH3_k127_12160569_1 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000468 258.0
YHH3_k127_12171480_0 Belongs to the GPI family K01810 - 5.3.1.9 1.065e-301 930.0
YHH3_k127_12171480_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005624 282.0
YHH3_k127_12171480_2 Protein of unknown function (DUF3545) - - - 0.000000000000000000000000003112 111.0
YHH3_k127_12175926_0 Citrate transporter - - - 1.326e-250 777.0
YHH3_k127_12175926_1 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 608.0
YHH3_k127_12175926_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 388.0
YHH3_k127_12175926_3 TonB dependent receptor - - - 0.0000000000000000000000000000000000003691 142.0
YHH3_k127_1218452_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 4.281e-314 967.0
YHH3_k127_1218452_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 1.485e-250 775.0
YHH3_k127_1218452_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 4.393e-204 636.0
YHH3_k127_1218452_3 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.0000000000000000000000000000000000000000000000000000000000119 207.0
YHH3_k127_12188790_0 Major facilitator superfamily K08224 - - 1.671e-201 633.0
YHH3_k127_12188790_1 Belongs to the pseudouridine synthase RsuA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 315.0
YHH3_k127_12188790_2 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K03088 - - 0.0000000000000000000000000000000000000000000000000000000000005071 212.0
YHH3_k127_12188790_3 TonB dependent receptor K02014 - - 0.0000000000000000000000001783 105.0
YHH3_k127_12215957_0 Alpha beta hydrolase - - - 1.365e-268 830.0
YHH3_k127_12215957_1 TonB dependent receptor - - - 0.00000000000000000000000000007393 121.0
YHH3_k127_12224283_0 PFAM peptidase M48 Ste24p - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 393.0
YHH3_k127_12224283_1 LemA family K03744 - - 0.00000000000000000000000000000000000000000000003371 169.0
YHH3_k127_12231807_0 acetyl-coa hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009083 455.0
YHH3_k127_12231807_1 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.000000003694 61.0
YHH3_k127_12240839_0 PFAM peptidase - - - 8.415e-245 760.0
YHH3_k127_12240839_1 decarboxylase beta subunit K01572 - 4.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 436.0
YHH3_k127_12246901_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1809.0
YHH3_k127_12246901_1 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.000000000000000000000000000000000000000000000000001464 183.0
YHH3_k127_12246901_2 Na H antiporter - - - 0.000000000000000000000000000000000000000004621 155.0
YHH3_k127_12303204_0 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 411.0
YHH3_k127_12303204_1 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006675 254.0
YHH3_k127_12303204_2 PFAM Flagellar hook-length control protein K02414 - - 0.00000000000000000000000000000000000000000000000000000000004061 225.0
YHH3_k127_12303204_3 Flagellar FliJ protein - - - 0.0000000000000000000000000000000000000000000000000000000003849 204.0
YHH3_k127_12314713_0 Dystroglycan-type cadherin domain protein K11005 - - 6.161e-236 737.0
YHH3_k127_12315039_0 Putative diguanylate phosphodiesterase - - - 6.092e-251 787.0
YHH3_k127_12315039_1 Protein of unknown function, DUF481 K07283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 395.0
YHH3_k127_12315039_2 mechanosensitive ion channel K03442 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005953 347.0
YHH3_k127_12324892_0 Alpha-glucosidase K01187 - 3.2.1.20 0.0 1285.0
YHH3_k127_12324892_1 Sigma-70 region 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000061 487.0
YHH3_k127_12324892_2 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000002895 192.0
YHH3_k127_12324892_3 Calcium/calmodulin dependent protein kinase II association domain - - - 0.0000000000002633 70.0
YHH3_k127_12324892_4 Alpha amylase, catalytic domain - - - 0.0000000000004594 71.0
YHH3_k127_12327424_0 transcriptional - - - 7.665e-297 914.0
YHH3_k127_12327424_1 Belongs to the glutaminase family K01425 - 3.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006819 546.0
YHH3_k127_12327424_2 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 - 2.3.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 340.0
YHH3_k127_12327424_3 membrane-bound metal-dependent hydrolases K07038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 329.0
YHH3_k127_12327424_4 Domain of Unknown Function (DUF1543) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005229 269.0
YHH3_k127_12327424_5 membrane-anchored protein - - - 0.000000000000000000000000000000000000000000000000000000000000000002603 229.0
YHH3_k127_12327424_6 Protein of unknown function (DUF2805) - - - 0.000000000000000000000000000000000025 136.0
YHH3_k127_12334877_0 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007186 532.0
YHH3_k127_12334877_1 COG0438 Glycosyltransferase K00754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005431 416.0
YHH3_k127_12334877_2 Belongs to the glycosyltransferase 26 family K05946 - 2.4.1.187 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008518 398.0
YHH3_k127_12334877_3 - - - - 0.0000000588 56.0
YHH3_k127_12335125_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1345.0
YHH3_k127_12335125_1 Protein of unknown function (DUF721) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001483 246.0
YHH3_k127_12335750_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 510.0
YHH3_k127_12335750_1 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006361 326.0
YHH3_k127_12335828_0 Diguanylate cyclase - - - 1.866e-294 912.0
YHH3_k127_12335828_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.197e-202 631.0
YHH3_k127_12335828_2 Protein of unknown function (DUF1569) - - - 0.0000000000000000000000000000000000000000000000000000000000000001425 226.0
YHH3_k127_12335828_3 - - - - 0.00000000000000000000000000000000000000000007866 164.0
YHH3_k127_1233818_0 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity K14540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007379 585.0
YHH3_k127_1233818_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 509.0
YHH3_k127_1233818_2 Peptidoglycan-binding protein, CsiV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 388.0
YHH3_k127_1233818_3 protein conserved in bacteria K09983 - - 0.0000000000000000000000000000000000000000000000004995 178.0
YHH3_k127_1233818_4 Sensors of blue-light using FAD - - - 0.0000000000000000000000000000000000002401 145.0
YHH3_k127_12350466_0 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006742 541.0
YHH3_k127_12350928_0 Beta-lactamase - - - 1.189e-237 741.0
YHH3_k127_12350928_1 Domain of Unknown Function (DUF349) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008846 377.0
YHH3_k127_12350928_2 - - - - 0.000000000000000000000000000000000008365 139.0
YHH3_k127_12350928_3 Protein of unknown function (DUF1315) K09916 - - 0.00000000000000000003809 92.0
YHH3_k127_12351072_0 Concanavalin A-like lectin/glucanases superfamily K12287 - - 0.0 1625.0
YHH3_k127_12351072_1 TIGRFAM ribonuclease, Rne Rng family K08301 - - 1.239e-300 925.0
YHH3_k127_12351072_10 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000000000000000000000000000000000000002759 190.0
YHH3_k127_12351072_11 Prokaryotic N-terminal methylation motif K10924 - - 0.000000000000000000000000000000000000000003847 160.0
YHH3_k127_12351072_12 Pilus assembly protein PilX K12286 - - 0.00000000000000000000000000005846 121.0
YHH3_k127_12351072_2 Protein of unknown function - - - 1.008e-232 735.0
YHH3_k127_12351072_3 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 7.154e-220 683.0
YHH3_k127_12351072_4 Type II secretion system (T2SS), protein F K12278 - - 1.322e-210 659.0
YHH3_k127_12351072_5 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005081 475.0
YHH3_k127_12351072_6 Prokaryotic N-terminal methylation motif K12285 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003279 361.0
YHH3_k127_12351072_7 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 294.0
YHH3_k127_12351072_8 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000914 280.0
YHH3_k127_12351072_9 Prokaryotic N-terminal methylation motif K10927 - - 0.000000000000000000000000000000000000000000000000000000000000000001397 233.0
YHH3_k127_12365749_0 Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins K07400 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 361.0
YHH3_k127_12365749_1 Peptidase M14, carboxypeptidase A - - - 0.00000000000000000000000000000000000000000009154 162.0
YHH3_k127_12374181_0 Thioesterase K12500 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016289,GO:0016787,GO:0016788,GO:0016790,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0047617,GO:0055114,GO:0071704,GO:0072329,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002368 271.0
YHH3_k127_12374181_2 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000000000001795 109.0
YHH3_k127_12385110_0 SMART Phospholipid glycerol acyltransferase K05939 - 2.3.1.40,6.2.1.20 2.723e-300 926.0
YHH3_k127_12394925_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 1.173e-218 690.0
YHH3_k127_12394925_1 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000001239 117.0
YHH3_k127_12403911_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 3.75e-322 989.0
YHH3_k127_12422194_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1444.0
YHH3_k127_12422194_1 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003255 266.0
YHH3_k127_12422194_2 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000007855 170.0
YHH3_k127_12434040_0 Acetyltransferase (GNAT) domain K03830 - - 0.0000000000000000000000000000000000000000000000000002937 188.0
YHH3_k127_12434040_1 TRANSCRIPTIONal - - - 0.0000000000000000000000000000000000000000004763 159.0
YHH3_k127_12434040_2 NADH flavin oxidoreductase NADH oxidase K10680 - - 0.00000000000000000000001269 100.0
YHH3_k127_12434040_3 PAAR repeat-containing protein - - - 0.00000000000002438 74.0
YHH3_k127_12460572_0 chemotaxis, protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 520.0
YHH3_k127_12473831_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 7.08e-250 776.0
YHH3_k127_12473831_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 383.0
YHH3_k127_12473831_2 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000003194 226.0
YHH3_k127_1248624_0 belongs to the aspartokinase family K12524,K12525 GO:0003674,GO:0003824,GO:0004072,GO:0004412,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009085,GO:0009089,GO:0009090,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.3,2.7.2.4 0.0 1079.0
YHH3_k127_1248624_1 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007272 396.0
YHH3_k127_1248624_2 PFAM Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000003577 167.0
YHH3_k127_1250909_0 lipase class 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 368.0
YHH3_k127_12509933_0 Carboxyl transferase domain K01969 - 6.4.1.4 0.0 1070.0
YHH3_k127_12509933_1 Acyl-CoA dehydrogenase, C-terminal domain K00253 - 1.3.8.4 8.248e-250 771.0
YHH3_k127_12509933_2 Belongs to the thiolase family K00626 - 2.3.1.9 3.556e-233 724.0
YHH3_k127_12509933_3 MerR, DNA binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000251 260.0
YHH3_k127_12509933_4 enoyl-CoA hydratase K13766 - 4.2.1.18 0.00000000000000000000000008336 107.0
YHH3_k127_12511928_0 TonB-dependent heme hemoglobin receptor K16087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 494.0
YHH3_k127_12511928_1 EF hand - - - 0.000000000000000000000000000004133 124.0
YHH3_k127_12541883_0 G-rich domain on putative tyrosine kinase K16554,K16692 - - 1.468e-231 738.0
YHH3_k127_12541883_1 COG1596 Periplasmic protein involved in polysaccharide export K20988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005253 244.0
YHH3_k127_12548225_0 oxidoreductase K16044 - 1.1.1.371 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 580.0
YHH3_k127_12548225_1 PFAM chemotaxis sensory transducer K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 365.0
YHH3_k127_12548225_2 Belongs to the peptidase S26 family - - - 0.0000000000000000000000000000000000000006609 148.0
YHH3_k127_12557174_0 LysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009168 562.0
YHH3_k127_12557174_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002126 271.0
YHH3_k127_12557174_2 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.000000000000000000000000000000000000000000000000000000000000000007895 226.0
YHH3_k127_12557174_3 ABC transporter transmembrane region K06147 - - 0.00000000000000000000001402 100.0
YHH3_k127_12558724_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity - - - 0.0 1155.0
YHH3_k127_12558724_1 Nuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005199 277.0
YHH3_k127_12558724_2 Protein of unknown function (DUF1622) - - - 0.000000000000000000000000000000000000002372 149.0
YHH3_k127_12558724_3 Glutathione S-transferase, C-terminal domain - - - 0.00000000000000000000000001124 109.0
YHH3_k127_1255906_0 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 1.017e-207 649.0
YHH3_k127_1255906_1 Receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006519 389.0
YHH3_k127_1255906_2 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000697 381.0
YHH3_k127_1258040_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 8.708e-214 666.0
YHH3_k127_1258040_1 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 308.0
YHH3_k127_1258040_2 Peptidyl-prolyl cis-trans K03774 - 5.2.1.8 0.000000000000000000000000000001796 121.0
YHH3_k127_12586152_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 2.142e-203 635.0
YHH3_k127_12586152_1 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000118 267.0
YHH3_k127_12593941_0 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006423 331.0
YHH3_k127_12593941_1 Signal transduction protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000852 261.0
YHH3_k127_12593941_2 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000004575 122.0
YHH3_k127_12608542_0 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006052 488.0
YHH3_k127_12630047_0 Belongs to the xylose isomerase family K01805 GO:0003674,GO:0003824,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009045,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019323,GO:0042732,GO:0042843,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 5.3.1.5 2.433e-237 739.0
YHH3_k127_12630047_1 Xylulose kinase K00854 - 2.7.1.17 0.0000006047 52.0
YHH3_k127_1263151_0 Protein of unknown function (DUF3010) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007679 261.0
YHH3_k127_1263151_1 - - - - 0.00000000000000000000000000000000000000001423 155.0
YHH3_k127_12634664_0 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 319.0
YHH3_k127_12634664_1 LytTr DNA-binding domain - - - 0.0000000000000004003 79.0
YHH3_k127_12634999_0 Drug resistance transporter Bcr CflA subfamily K07552 - - 1.707e-214 670.0
YHH3_k127_12634999_1 Bacterial Na+/H+ antiporter B (NhaB) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 406.0
YHH3_k127_12634999_2 Bacterial extracellular solute-binding proteins, family 3 - - - 0.00000000000000000000000000000000000000000000000714 175.0
YHH3_k127_12643249_0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K00134 - 1.2.1.12 8.952e-218 677.0
YHH3_k127_12643249_1 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000004947 238.0
YHH3_k127_12643249_2 Patatin-like phospholipase - - - 0.0000000000000001452 90.0
YHH3_k127_1265512_0 aconitate hydratase K20455 - 4.2.1.117 0.0 1328.0
YHH3_k127_1265512_1 Belongs to the citrate synthase family K01659 GO:0003674,GO:0003824,GO:0004108,GO:0006082,GO:0006091,GO:0006113,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016740,GO:0016746,GO:0016829,GO:0016830,GO:0016833,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0036440,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0046459,GO:0046912,GO:0050440,GO:0055114,GO:0071704 2.3.3.5 2.824e-233 724.0
YHH3_k127_1265512_2 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006113,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0015980,GO:0016042,GO:0016054,GO:0016829,GO:0016830,GO:0016833,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0032787,GO:0042737,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0046421,GO:0046459,GO:0046872,GO:0055114,GO:0071704,GO:0072329,GO:1901575 4.1.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000412 431.0
YHH3_k127_1265512_3 Similarity to COG0437 Fe-S-cluster-containing hydrogenase components 1(Evalue - - - 0.000001979 49.0
YHH3_k127_12672269_0 peptidase dimerisation domain - - - 5.489e-221 686.0
YHH3_k127_12672269_1 Belongs to the DEAD box helicase family K05591 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 471.0
YHH3_k127_1268078_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 1.891e-210 654.0
YHH3_k127_1268078_1 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 554.0
YHH3_k127_1268078_2 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004721 342.0
YHH3_k127_1268078_3 COG0790 FOG TPR repeat, SEL1 subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002586 274.0
YHH3_k127_1268078_4 Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second- messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a - - - 0.000000000000000000000000000000000000000000000000000975 188.0
YHH3_k127_1268078_5 Protein of unknown function (DUF493) K09158 - - 0.000000000000000000000000000000000000000000000001735 174.0
YHH3_k127_12709574_0 Biotin-lipoyl like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006941 536.0
YHH3_k127_12709574_1 PFAM membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003051 270.0
YHH3_k127_12709574_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000001194 154.0
YHH3_k127_12718906_0 Diguanylate cyclase - - - 1.796e-312 964.0
YHH3_k127_12718906_1 Middle or third domain of peptidase_M16 - - - 2.626e-240 749.0
YHH3_k127_12727065_0 Bacterial sugar transferase K03606 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 558.0
YHH3_k127_12727065_1 Putative beta-barrel porin 2 K20920 - - 0.000000000000000000000000004862 120.0
YHH3_k127_12727065_2 - - - - 0.00000000000000000005443 103.0
YHH3_k127_12751804_0 ABC transporter K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 361.0
YHH3_k127_12772883_0 Part of a membrane complex involved in electron transport K03614 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009164 479.0
YHH3_k127_12772883_1 Part of a membrane complex involved in electron transport K03615 - - 0.0000001494 56.0
YHH3_k127_12788639_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000007891 248.0
YHH3_k127_12790543_0 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007149 400.0
YHH3_k127_12790543_1 COG2203 FOG GAF domain - - - 0.00000000000000000000000000000000000000000000000000000000000395 211.0
YHH3_k127_12799293_0 transporter K12942 - - 2e-323 992.0
YHH3_k127_12799293_1 Histidine kinase - - - 6.148e-242 751.0
YHH3_k127_12799293_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 397.0
YHH3_k127_12799293_3 Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepressors, hypoxanthine or guanine, thereby effecting transcription repression K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005321 362.0
YHH3_k127_12806427_0 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 7.18e-221 685.0
YHH3_k127_12806427_1 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002265 376.0
YHH3_k127_1281543_0 ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006553 521.0
YHH3_k127_1281543_1 BON domain - - - 0.0000000002008 61.0
YHH3_k127_12826666_0 Acts as a magnesium transporter K06213 - - 9.276e-267 824.0
YHH3_k127_12826666_1 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008368 464.0
YHH3_k127_12826666_2 Belongs to the RimK family K05844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008168 264.0
YHH3_k127_12833844_0 Pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 1.84e-205 640.0
YHH3_k127_12834986_0 Aromatic amino acid lyase K01745 - 4.3.1.3 1.612e-244 767.0
YHH3_k127_12834986_1 Bacterial lipid A biosynthesis acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 292.0
YHH3_k127_12834986_2 exporter - - - 0.000000000000000000000000000000000000000000000000000000006449 218.0
YHH3_k127_12834986_3 thioesterase K07107 - - 0.0000000000000000000000000000000000000000000000001086 182.0
YHH3_k127_12834986_4 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000004568 64.0
YHH3_k127_12835983_0 PFAM Peptidase M22, glycoprotease K14742 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837 375.0
YHH3_k127_12835983_1 Helicase K03722 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008266 263.0
YHH3_k127_12835983_2 - - - - 0.0000000000000000000000000000000000000001871 152.0
YHH3_k127_12835983_3 KR domain - - - 0.00000000000000000006047 90.0
YHH3_k127_12866931_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 4.792e-223 696.0
YHH3_k127_12876693_0 Receptor K02014 - - 4.861e-207 647.0
YHH3_k127_12876693_1 SH3 domain (SH3b1 type) - - - 0.0000000001911 65.0
YHH3_k127_12888646_0 peptidase, M13 K01415,K07386 - 3.4.24.71 5.956e-281 867.0
YHH3_k127_12888646_1 Domain of unknown function (DUF4401) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 388.0
YHH3_k127_12888646_2 Membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007418 378.0
YHH3_k127_1299969_0 response regulator receiver K07713,K07715 - - 1.576e-269 833.0
YHH3_k127_1299969_1 Adenosine/AMP deaminase K01488,K21053 - 3.5.4.2,3.5.4.4 1.019e-256 792.0
YHH3_k127_1299969_2 Histidine kinase K07711 - 2.7.13.3 9.452e-247 768.0
YHH3_k127_1299969_3 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 555.0
YHH3_k127_1299969_4 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 552.0
YHH3_k127_1299969_5 Cupin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 355.0
YHH3_k127_1299969_6 acyl-coa hydrolase K10806 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 320.0
YHH3_k127_1299969_7 intracellular protease amidase - - - 0.000000000000000000000000000000000000000000000000001409 185.0
YHH3_k127_1299969_8 Protein of unknown function (DUF2288) - - - 0.000000000000000000000000000000000000000000000000002005 184.0
YHH3_k127_1299969_9 - - - - 0.000000000000000000000000000000000004904 145.0
YHH3_k127_1303995_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1404.0
YHH3_k127_1303995_1 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 - - 1.255e-272 843.0
YHH3_k127_1303995_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000009541 262.0
YHH3_k127_1307602_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1381.0
YHH3_k127_1307602_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides - - - 0.00000000000000000000000000000000000000000000000000000000000000001861 224.0
YHH3_k127_1308699_0 Involved in the TonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 558.0
YHH3_k127_1308699_1 Membrane protein involved in colicin uptake K03646 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0016020,GO:0016021,GO:0016032,GO:0017038,GO:0019058,GO:0019904,GO:0030260,GO:0031224,GO:0031226,GO:0032153,GO:0033036,GO:0042221,GO:0042493,GO:0042886,GO:0042891,GO:0043213,GO:0044403,GO:0044409,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046677,GO:0046678,GO:0046718,GO:0046790,GO:0050896,GO:0051179,GO:0051234,GO:0051301,GO:0051701,GO:0051704,GO:0051716,GO:0051806,GO:0051828,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:0071944,GO:0097718,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701 - 0.0000000000000000000000000000000000000000000000000000000000000000001523 233.0
YHH3_k127_1324790_0 Part of a membrane complex involved in electron transport K03615 - - 6.985e-194 623.0
YHH3_k127_1339959_0 Glycosyl transferase family 2 K07011,K20444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 424.0
YHH3_k127_1350564_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007129 308.0
YHH3_k127_1350564_1 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000001049 244.0
YHH3_k127_1370770_0 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 357.0
YHH3_k127_1370770_1 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001217 249.0
YHH3_k127_1370770_2 PFAM Uncharacterised conserved protein UCP029693 - - - 0.0000000000000000000000000000000000000000000000000000000001568 203.0
YHH3_k127_1380067_0 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 2.14e-240 746.0
YHH3_k127_1380067_1 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 496.0
YHH3_k127_1380067_2 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003886 287.0
YHH3_k127_1384724_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 1.522e-305 942.0
YHH3_k127_1384724_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007536 457.0
YHH3_k127_1384724_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 439.0
YHH3_k127_1384724_3 SCP-2 sterol transfer family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008398 299.0
YHH3_k127_1384724_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.0000000000000000000000000000000001775 134.0
YHH3_k127_1384724_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 GO:0002790,GO:0003674,GO:0005215,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0034613,GO:0042886,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705 - 0.0000000000000000000000000001252 116.0
YHH3_k127_1384724_6 - - - - 0.00002173 48.0
YHH3_k127_1386871_0 Receptor - - - 2.096e-310 956.0
YHH3_k127_1386871_1 (GGDEF) domain - - - 0.0000000000000000000000000000000000000000004396 159.0
YHH3_k127_1394919_0 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 462.0
YHH3_k127_1394919_1 CreA protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005377 277.0
YHH3_k127_140334_0 glucose galactose transporter K02429 - - 3.9e-235 732.0
YHH3_k127_140334_1 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000004267 242.0
YHH3_k127_140334_2 COGs COG4299 conserved - - - 0.0000000000000000000000000000000007204 130.0
YHH3_k127_1407290_0 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 390.0
YHH3_k127_1407290_1 Membrane - - - 0.0000000000000000000000000000000000000000000000000000001765 195.0
YHH3_k127_1407290_2 Protein of unknown function (DUF3301) - - - 0.000000000000000000000000000000000000000000000000002442 182.0
YHH3_k127_1407290_3 Protein of unknown function (DUF2789) - - - 0.0000000000000004089 80.0
YHH3_k127_1407290_4 tRNA pseudouridine synthase C - - - 0.0000008931 52.0
YHH3_k127_1428223_0 Oligopeptidase K01354 - 3.4.21.83 0.000000000000000000000000000000000000000000000000000000000000000000000000019 252.0
YHH3_k127_1428223_1 Catalyzes the phosphorylation of thiamine to thiamine phosphate K07251 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019165,GO:0044237 2.7.1.89 0.00000000000000000000000000000000000000000000001654 175.0
YHH3_k127_1428223_2 - - - - 0.000000000000000000000000001916 112.0
YHH3_k127_1431527_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.228e-241 748.0
YHH3_k127_1443157_0 His Kinase A (phosphoacceptor) domain - - - 9.335e-222 692.0
YHH3_k127_1443157_1 COG0534 Na -driven multidrug efflux pump K03327 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007549 460.0
YHH3_k127_1443157_2 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000778 442.0
YHH3_k127_1443157_3 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 406.0
YHH3_k127_1443157_4 epimerase, PhzC PhzF homolog - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 369.0
YHH3_k127_1443157_6 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000139 194.0
YHH3_k127_1449296_0 of ABC transporters with duplicated ATPase - - - 8.329e-252 779.0
YHH3_k127_1449296_1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase K01625 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008675,GO:0008700,GO:0008948,GO:0016829,GO:0016830,GO:0016831,GO:0016832,GO:0016833,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0106009 4.1.2.14,4.1.3.42 0.0000000000000000000000000000000000000000000000000000000000000000004508 229.0
YHH3_k127_1449984_0 type I secretion outer membrane protein, TolC K12340 - - 4.511e-203 642.0
YHH3_k127_1449984_1 Lipid A biosynthesis K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008778 457.0
YHH3_k127_1449984_2 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 360.0
YHH3_k127_1449984_3 protein conserved in bacteria K09920 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000291 244.0
YHH3_k127_1449984_4 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 - 3.1.4.53 0.00000000000000000000003536 100.0
YHH3_k127_1493679_0 PFAM Aminotransferase class-III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004186 387.0
YHH3_k127_1493679_1 Signal transduction protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001055 259.0
YHH3_k127_1503653_0 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000665 502.0
YHH3_k127_1503653_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005634 302.0
YHH3_k127_1503653_2 membrane transporter protein K07090 - - 0.000000000000000000000000000001244 121.0
YHH3_k127_1538028_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F - - - 0.0 1302.0
YHH3_k127_1538028_1 modulator of DNA gyrase K03592 - - 7.96e-271 835.0
YHH3_k127_1538028_2 Belongs to the UPF0307 family K09889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001073 253.0
YHH3_k127_1539393_0 COG3525 N-acetyl-beta-hexosaminidase K12373 - 3.2.1.52 3.725e-208 659.0
YHH3_k127_154831_0 NGG1p interacting factor 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 396.0
YHH3_k127_154831_1 glycosyl transferase family 2 K20444 - - 0.00000000000000000000000000000000000000000000000000002234 190.0
YHH3_k127_154831_2 - - - - 0.000000000000000000000000000000000000008392 148.0
YHH3_k127_154831_3 Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs K06219 GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097697,GO:0140098,GO:0140101,GO:1901360 - 0.0000001246 53.0
YHH3_k127_1552898_0 With MotB forms the ion channels that couple flagellar rotation to proton sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 435.0
YHH3_k127_1552898_1 PFAM OmpA MotB domain protein K02557 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009288,GO:0009425,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044425,GO:0044459,GO:0044461,GO:0044463,GO:0044464,GO:0071944,GO:0120100,GO:0120101 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006411 402.0
YHH3_k127_1552898_2 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003092 282.0
YHH3_k127_1552898_3 TIGRFAM RNA polymerase sigma factor, FliA WhiG family K02405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002147 251.0
YHH3_k127_1552898_4 Type III flagellar switch regulator (C-ring) FliN C-term - - - 0.000000000000000000000000000000000000000000000000000000000000007073 227.0
YHH3_k127_1552898_5 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.0000000000000000000000000000001497 127.0
YHH3_k127_1552898_6 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000000000000008507 124.0
YHH3_k127_1552898_7 Flagellar hook-length control protein K02414 - - 0.00000000000000000000000006619 112.0
YHH3_k127_1552898_8 - - - - 0.0000000000000000006988 93.0
YHH3_k127_1565530_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 7.265e-211 656.0
YHH3_k127_1565530_1 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - GO:0005575,GO:0005623,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043933,GO:0044085,GO:0044464,GO:0051259,GO:0051260,GO:0051301,GO:0065003,GO:0071840 - 0.00000006117 57.0
YHH3_k127_1565530_2 - - - - 0.000000261 53.0
YHH3_k127_157943_0 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000001814 62.0
YHH3_k127_1582489_0 Glycosyl transferase family group 2 - - - 2.169e-234 731.0
YHH3_k127_1582489_1 Diguanylate cyclase, GGDEF domain - - - 1.907e-202 640.0
YHH3_k127_1582489_2 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002551 276.0
YHH3_k127_1591612_0 Outer membrane protein protective antigen OMA87 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 535.0
YHH3_k127_1592472_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000517 290.0
YHH3_k127_1592472_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.000000000000000000000000000006703 119.0
YHH3_k127_1593016_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 4.233e-296 910.0
YHH3_k127_1593016_1 alpha beta alpha domain I K01835 - 5.4.2.2 7.082e-247 763.0
YHH3_k127_1604935_0 Diguanylate cyclase - - - 7.034e-292 905.0
YHH3_k127_162089_0 negative chemotaxis K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 454.0
YHH3_k127_165176_0 Threonine/Serine exporter, ThrE - - - 7.94e-225 700.0
YHH3_k127_165176_1 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005086 292.0
YHH3_k127_165176_2 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000006982 112.0
YHH3_k127_1653800_0 Diguanylate cyclase - - - 1.784e-300 937.0
YHH3_k127_1653800_1 cytochrome - - - 0.00000000000000000000000000000000000006307 144.0
YHH3_k127_1654605_0 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 539.0
YHH3_k127_1654605_1 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008259 319.0
YHH3_k127_1654605_2 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001306 256.0
YHH3_k127_1654605_3 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA K11719 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015920,GO:0016020,GO:0016021,GO:0017089,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001858 255.0
YHH3_k127_1662144_0 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03184 - - 1.856e-213 667.0
YHH3_k127_1662144_1 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 348.0
YHH3_k127_1662144_2 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008826 325.0
YHH3_k127_1662144_3 - - - - 0.000000000000000000005928 98.0
YHH3_k127_1662144_4 - - - - 0.00000007658 55.0
YHH3_k127_1672416_0 Lytic murein transglycosylase K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 494.0
YHH3_k127_1672416_1 YcgL domain-containing protein K09902 - - 0.00000000000000000000000000000000113 132.0
YHH3_k127_1672416_2 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.0000000000000000003194 89.0
YHH3_k127_1680393_0 Peptidase m28 - - - 1.441e-285 877.0
YHH3_k127_1683346_0 Permease YjgP YjgQ family K07091 - - 3.016e-203 636.0
YHH3_k127_1683346_1 permease K11720 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015920,GO:0016020,GO:0016021,GO:0031224,GO:0032991,GO:0033036,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 398.0
YHH3_k127_169428_0 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009538 387.0
YHH3_k127_169428_1 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K03296,K18299 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 336.0
YHH3_k127_1694484_0 polysaccharide export - - - 2.828e-226 714.0
YHH3_k127_1694484_1 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 334.0
YHH3_k127_1694484_2 Transport permease protein K09688 - - 0.00000000000004946 73.0
YHH3_k127_1694484_3 17 kDa common-antigen outer membrane protein - - - 0.0009052 47.0
YHH3_k127_1701489_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1078.0
YHH3_k127_1701489_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 602.0
YHH3_k127_1701489_2 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) - - - 0.00000000000000000000001222 100.0
YHH3_k127_1718516_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008457 482.0
YHH3_k127_1718516_1 Belongs to the P(II) protein family K04751,K04752 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006808,GO:0008144,GO:0008150,GO:0009889,GO:0010565,GO:0017076,GO:0019216,GO:0019217,GO:0019222,GO:0030234,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042304,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0046890,GO:0050789,GO:0050790,GO:0050794,GO:0062012,GO:0065007,GO:0065009,GO:0080090,GO:0097159,GO:0097367,GO:0098772,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000006104 166.0
YHH3_k127_172482_0 VRR_NUC - - - 0.0 1199.0
YHH3_k127_172482_1 COG0530 Ca2 Na antiporter K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 544.0
YHH3_k127_172482_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family K00569 - 2.1.1.67 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 356.0
YHH3_k127_172482_3 - - - - 0.0000000000001051 76.0
YHH3_k127_1731623_0 Transcriptional regulatory protein, C terminal - - - 0.0 1546.0
YHH3_k127_1731623_1 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 432.0
YHH3_k127_1741283_0 xylanase chitin deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 308.0
YHH3_k127_1741283_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002732 267.0
YHH3_k127_1755811_0 FAD linked oxidases, C-terminal domain - - - 0.0 1848.0
YHH3_k127_1755811_1 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 GO:0003674,GO:0003824,GO:0003933,GO:0003935,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019238,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.5.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 378.0
YHH3_k127_1755811_2 Protein of unknown function (DUF1456) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002517 243.0
YHH3_k127_1755811_3 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.00000000000000000000000000000000000134 140.0
YHH3_k127_1769909_0 ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 454.0
YHH3_k127_1770662_0 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 5.076e-202 632.0
YHH3_k127_1770662_1 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 436.0
YHH3_k127_1773322_0 acyl-CoA dehydrogenase K06445 - - 0.0 1146.0
YHH3_k127_1773322_1 Endonuclease Exonuclease phosphatase K07004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 569.0
YHH3_k127_1822041_0 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006434 463.0
YHH3_k127_1822041_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009677 359.0
YHH3_k127_1828752_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1032.0
YHH3_k127_1828752_1 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 487.0
YHH3_k127_1844506_0 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000077 228.0
YHH3_k127_1844506_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000001643 247.0
YHH3_k127_1844506_2 Histidine kinase-like ATPases - - - 0.0000000000000000000000001236 123.0
YHH3_k127_1845785_0 Peptidase S46 - - - 0.0 1310.0
YHH3_k127_1845785_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 2.392e-282 875.0
YHH3_k127_1845785_2 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008406 362.0
YHH3_k127_1845785_3 CBS domain K07168,K07182 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003542 252.0
YHH3_k127_1845785_4 COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.0000000007581 60.0
YHH3_k127_1849744_0 Transketolase, pyrimidine binding domain - - - 0.0 1275.0
YHH3_k127_1849744_1 Acyl-carrier-protein s-malonyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 534.0
YHH3_k127_1849744_2 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 340.0
YHH3_k127_1849744_3 Acyl-CoA dehydrogenase, middle domain - - - 0.00000000000000000000000000000000000000000000000000001509 188.0
YHH3_k127_1852878_0 Protein of unknown function (DUF2802) - - - 0.0000000000000000000000000000000000000000000000000001426 189.0
YHH3_k127_1852878_1 acr, cog1565 - - - 0.00000000000000000000000000000000000000000000000001398 182.0
YHH3_k127_1852878_2 cytoplasmic domain of flagellar protein K04061 - - 0.0000000000000000000000000000000000000000000000001282 178.0
YHH3_k127_1852878_3 PFAM CheW domain protein K03408 - - 0.0000000000000000000000000000355 116.0
YHH3_k127_189031_0 Na H antiporter - - - 9.259e-236 734.0
YHH3_k127_189031_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0000988,GO:0000989,GO:0003674,GO:0003756,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006457,GO:0006458,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010556,GO:0015035,GO:0015036,GO:0016020,GO:0016032,GO:0016043,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0016989,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031326,GO:0032991,GO:0034641,GO:0034645,GO:0042026,GO:0043167,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051704,GO:0055114,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0140096,GO:0140110,GO:1901360,GO:1901576,GO:1903506,GO:2001141 - 5.358e-207 647.0
YHH3_k127_189031_2 peptidase M48, Ste24p - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 471.0
YHH3_k127_189031_3 HPr kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005346 353.0
YHH3_k127_189031_4 Uncharacterised nucleotidyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 349.0
YHH3_k127_189031_6 SMART Phospholipid glycerol acyltransferase K05939 - 2.3.1.40,6.2.1.20 0.0000000000000000000000000000000000003538 141.0
YHH3_k127_189031_7 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000006495 104.0
YHH3_k127_1891867_0 Belongs to the mandelate racemase muconate lactonizing enzyme family K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 3.634e-210 656.0
YHH3_k127_1891867_1 Transcriptional regulator K15835 GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000558 460.0
YHH3_k127_1891867_2 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - - - 0.000000000000000000000000000000000000000000000003543 174.0
YHH3_k127_1891867_3 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000001106 144.0
YHH3_k127_190597_0 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004419 473.0
YHH3_k127_190597_1 regulatory protein AmpE K03807 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 421.0
YHH3_k127_190597_2 PFAM N-acetylmuramoyl-L-alanine amidase family 2 K03806 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004918 308.0
YHH3_k127_190597_3 Cold-shock protein, DNA-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 306.0
YHH3_k127_190597_4 TIGRFAM clan AA aspartic protease, TIGR02281 family K06985 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001145 277.0
YHH3_k127_190597_5 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001481 271.0
YHH3_k127_190597_6 Prokaryotic N-terminal methylation motif K02650 - - 0.000000000000000000001155 100.0
YHH3_k127_1913380_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain - - - 0.0 1361.0
YHH3_k127_1913380_1 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 477.0
YHH3_k127_1913380_2 PFAM Lytic K08309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001467 256.0
YHH3_k127_1917507_0 TIGRFAM amino acid peptide transporter (Peptide H symporter), bacterial - - - 1.847e-313 963.0
YHH3_k127_1917507_1 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 1.143e-210 658.0
YHH3_k127_1917507_2 Male sterility protein K02473 - 5.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008203 563.0
YHH3_k127_1917507_3 Belongs to the UPF0263 family K09901 - - 0.0000000000000000000000000000000000000001292 150.0
YHH3_k127_1917507_4 - - - - 0.00000000000000000000000000000000000002224 145.0
YHH3_k127_1919474_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1324.0
YHH3_k127_1919474_1 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000000000000000000000000000005047 190.0
YHH3_k127_1919474_2 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000001072 181.0
YHH3_k127_1921981_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 557.0
YHH3_k127_1921981_1 antibiotic catabolic process K13277,K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002332 287.0
YHH3_k127_1921981_2 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000000000000000006155 119.0
YHH3_k127_1934338_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005903 598.0
YHH3_k127_1934338_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004075 498.0
YHH3_k127_1934338_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005064 395.0
YHH3_k127_1934338_3 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 357.0
YHH3_k127_1934338_4 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001022 263.0
YHH3_k127_1935494_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00322 - 1.6.1.1 1.647e-250 774.0
YHH3_k127_1935494_1 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K07126 - - 1.642e-238 743.0
YHH3_k127_1935494_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 7.434e-228 707.0
YHH3_k127_1935494_3 WD40 repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 486.0
YHH3_k127_1935494_4 nadh pyrophosphatase K03426 GO:0003674,GO:0003824,GO:0004551,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0030145,GO:0033554,GO:0034641,GO:0035529,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 443.0
YHH3_k127_1935494_5 Peptidyl-prolyl cis-trans K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 382.0
YHH3_k127_1935494_6 Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase K07740 GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 316.0
YHH3_k127_194524_0 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 449.0
YHH3_k127_194524_1 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0000000000000000000000000000000000000000001677 160.0
YHH3_k127_1946923_0 Dicarboxylate transport - - - 2.01e-217 687.0
YHH3_k127_1946923_1 YnbE-like lipoprotein - - - 0.0000000000005533 69.0
YHH3_k127_1965137_0 Alpha amylase, catalytic domain - - - 1.495e-229 715.0
YHH3_k127_1989669_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 534.0
YHH3_k127_1989669_1 COG1680 Beta-lactamase class C and other penicillin binding proteins K01467 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 505.0
YHH3_k127_1989669_2 Maltogenic Amylase, C-terminal domain K16147 - 2.4.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004145 345.0
YHH3_k127_1989669_3 PFAM peptidase S8 and S53 subtilisin kexin sedolisin K08651 - 3.4.21.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 329.0
YHH3_k127_1989669_4 regulation of response to stimulus K13730 - - 0.0000000000000000000000000000000000000000000000001226 203.0
YHH3_k127_1993218_0 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 9.376e-228 707.0
YHH3_k127_1993218_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 518.0
YHH3_k127_1993218_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR - - - 0.00000000000000000000000000000000000000000001424 164.0
YHH3_k127_1999776_0 TonB dependent receptor K02014 - - 0.0 1513.0
YHH3_k127_1999776_1 Glycosyl hydrolases family 16 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 429.0
YHH3_k127_1999776_2 Acetyl-CoA hydrolase/transferase C-terminal domain - - - 0.000000000000000000000000000000001096 134.0
YHH3_k127_2031334_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 1.37e-300 923.0
YHH3_k127_2031334_1 protein conserved in bacteria K09989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 429.0
YHH3_k127_2031334_2 PFAM Alcohol dehydrogenase K12957,K13979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003401 370.0
YHH3_k127_2031334_3 signal transduction protein containing EAL and modified HD-GYP domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005908 313.0
YHH3_k127_203772_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 - 3.1.11.5 1.076e-292 910.0
YHH3_k127_2047572_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008585 288.0
YHH3_k127_2047572_1 TIGRFAM Thioredoxin K03672 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000003034 257.0
YHH3_k127_2047572_2 PFAM Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000002443 87.0
YHH3_k127_2054430_0 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000004526 250.0
YHH3_k127_2054430_1 Phage tail protein (Tail_P2_I) - - - 0.000000000000000000000000008606 115.0
YHH3_k127_2054791_0 Protein of unknown function (DUF3584) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 540.0
YHH3_k127_2054791_1 Domain of unknown function (DUF4340) - - - 0.0000000000000000000000000000000000000006238 160.0
YHH3_k127_2085351_0 TonB dependent receptor - - - 4.195e-211 659.0
YHH3_k127_2095906_0 TonB dependent receptor - - - 4e-316 980.0
YHH3_k127_2095906_1 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0044237 2.7.1.170 0.00000000000001576 74.0
YHH3_k127_2116733_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005194 400.0
YHH3_k127_2116733_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000000001555 207.0
YHH3_k127_2129301_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 7.918e-248 769.0
YHH3_k127_2129301_1 glycyl-tRNA synthetase alpha subunit K01878 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000001115 236.0
YHH3_k127_2135208_0 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 358.0
YHH3_k127_2135208_1 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000002316 220.0
YHH3_k127_2135208_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000000009997 210.0
YHH3_k127_2135208_3 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.0000000000000000000000000000000000001437 141.0
YHH3_k127_2139961_0 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006134 533.0
YHH3_k127_2139961_1 Domain of unknown function (DUF4392) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000665 294.0
YHH3_k127_2150195_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 318.0
YHH3_k127_2150195_1 COG0346 Lactoylglutathione lyase and related lyases - - - 0.000000000000000000000000000000000000000000002191 167.0
YHH3_k127_2170539_0 TIGRFAM Tyrosine recombinase XerD K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 420.0
YHH3_k127_2170539_1 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006968 358.0
YHH3_k127_2183794_0 PFAM Cytochrome bd ubiquinol oxidase, subunit I K00425 - 1.10.3.14 1.999e-264 819.0
YHH3_k127_2183794_1 oxidase subunit K00426 - 1.10.3.14 5.642e-200 625.0
YHH3_k127_2183794_2 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004722 576.0
YHH3_k127_2194376_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 589.0
YHH3_k127_2194376_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005672 551.0
YHH3_k127_2194376_2 phospholipase Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007319 419.0
YHH3_k127_2194376_3 Frataxin-like domain K06202 - - 0.000000000000000000000000000000000000000000000000000000000000004171 218.0
YHH3_k127_2194376_4 Uroporphyrinogen III synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000002796 185.0
YHH3_k127_2199852_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 1.604e-202 637.0
YHH3_k127_2199852_1 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008313 372.0
YHH3_k127_2199852_10 Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000003208 155.0
YHH3_k127_2199852_11 Belongs to the bacterial ribosomal protein bL33 family K02913 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046677,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000001336 102.0
YHH3_k127_2199852_2 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 360.0
YHH3_k127_2199852_3 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005692 357.0
YHH3_k127_2199852_4 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 292.0
YHH3_k127_2199852_5 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000001656 233.0
YHH3_k127_2199852_7 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000000000000000000000000000000000000000000000000000003012 212.0
YHH3_k127_2199852_8 Phospholipid methyltransferase K21310 - 2.1.1.334 0.0000000000000000000000000000000000000000000000000000001427 204.0
YHH3_k127_2199852_9 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000002916 161.0
YHH3_k127_2218939_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0 1064.0
YHH3_k127_2218939_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 4.881e-211 657.0
YHH3_k127_2218939_2 PFAM MazG nucleotide pyrophosphohydrolase K04765 - 3.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003613 454.0
YHH3_k127_2218939_3 Ribosomal subunit interface protein - - - 0.0000000000000000000000000000000000000000000000000000000007031 202.0
YHH3_k127_2231657_0 FAD dependent oxidoreductase K09471 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001958 279.0
YHH3_k127_2231657_1 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004816 251.0
YHH3_k127_2235508_0 Belongs to the glycosyl hydrolase 13 family K01200 - 3.2.1.41 0.0 1552.0
YHH3_k127_2235508_1 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0 1371.0
YHH3_k127_2243852_0 Domain of unknown function (DUF368) K08974 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005127 461.0
YHH3_k127_2243852_1 peptidase K06194 - - 0.000000000000000000000000000000000000021 148.0
YHH3_k127_2248341_0 ZIP Zinc transporter K07238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 452.0
YHH3_k127_2248341_1 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 295.0
YHH3_k127_2248341_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004484 291.0
YHH3_k127_2248341_3 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000003152 205.0
YHH3_k127_2248341_4 - - - - 0.00006222 50.0
YHH3_k127_2248341_5 Otopetrin - GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015252,GO:0015267,GO:0015318,GO:0015672,GO:0016020,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0034220,GO:0051179,GO:0051234,GO:0055085,GO:0098655,GO:0098660,GO:0098662,GO:1902600 - 0.0004874 46.0
YHH3_k127_2271286_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 1.339e-266 824.0
YHH3_k127_2271286_1 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.0000000000000000000000007173 104.0
YHH3_k127_228251_0 chemotaxis protein K03406 - - 2.85e-267 837.0
YHH3_k127_228251_1 Nucleoside-binding outer membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001047 262.0
YHH3_k127_2289843_0 Biotin carboxylase C-terminal domain K01968 - 6.4.1.4 0.0 1211.0
YHH3_k127_2289843_1 HMGL-like K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 556.0
YHH3_k127_2289843_2 enoyl-CoA hydratase K13766 - 4.2.1.18 0.0000000000000000000000000000000000000000000000000000002714 195.0
YHH3_k127_2289843_3 COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01028 - 2.8.3.5 0.00000000000000000000000000000002642 126.0
YHH3_k127_2297790_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003876 506.0
YHH3_k127_2305430_0 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 497.0
YHH3_k127_2308237_0 ABC transporter K15738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007207 277.0
YHH3_k127_2308237_1 Protein of unknown function (DUF3466) - - - 0.000000000000000000000000000000000000000000000000000000000183 209.0
YHH3_k127_2331437_0 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 473.0
YHH3_k127_2331437_1 Esterase PHB depolymerase K03932 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001183 272.0
YHH3_k127_2331437_2 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000001429 161.0
YHH3_k127_2333640_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1783.0
YHH3_k127_2336778_0 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004385 317.0
YHH3_k127_2336778_1 Chalcone isomerase-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005766 246.0
YHH3_k127_2336778_2 Protein of unknown function (DUF2878) - - - 0.00000000000000000000000000000000000000000000000000000001721 201.0
YHH3_k127_2336778_3 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.0000000000000000000000000008894 112.0
YHH3_k127_2341759_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1325.0
YHH3_k127_2369047_0 COG0840 Methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000001112 234.0
YHH3_k127_2369047_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000006034 150.0
YHH3_k127_2374464_0 Fatty acid cis/trans isomerase (CTI) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007885 546.0
YHH3_k127_2374464_1 Domain of unknown function (DUF4394) - - - 0.0000000000000000000000159 102.0
YHH3_k127_2379515_0 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 491.0
YHH3_k127_2379515_1 integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001377 233.0
YHH3_k127_2379515_2 integral membrane protein - - - 0.000000000000000000000000000001566 128.0
YHH3_k127_2379515_3 cAMP biosynthetic process - - - 0.000000000009521 66.0
YHH3_k127_2385640_0 Phytase - - - 3.372e-285 884.0
YHH3_k127_2385640_1 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000000000000000000000000000000000000005174 221.0
YHH3_k127_2385640_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000003991 223.0
YHH3_k127_2387245_0 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 486.0
YHH3_k127_2387245_1 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006152 428.0
YHH3_k127_2395499_0 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 573.0
YHH3_k127_2395499_1 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000004951 177.0
YHH3_k127_2395499_2 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000028,GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070475,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140102,GO:1901360,GO:1901363 2.1.1.182 0.00000000000000000000006743 100.0
YHH3_k127_2426544_0 Belongs to the aldehyde dehydrogenase family K00154 - 1.2.1.68 1.479e-260 809.0
YHH3_k127_2426544_1 COG0477 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 544.0
YHH3_k127_2426544_2 transcriptional regulator K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003425 481.0
YHH3_k127_2426544_3 MFS/sugar transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 449.0
YHH3_k127_2426544_4 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004655 387.0
YHH3_k127_2426544_5 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 308.0
YHH3_k127_2431496_0 Type VI secretion system, TssF K11896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 353.0
YHH3_k127_2431496_1 Type VI secretion, TssG K11895 - - 0.000000000000000000000000000000000531 133.0
YHH3_k127_2449909_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1234.0
YHH3_k127_2449909_1 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 2.528e-318 975.0
YHH3_k127_2480559_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 2.616e-304 935.0
YHH3_k127_2480559_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 8.01e-198 619.0
YHH3_k127_2480559_2 PFAM Orn Lys Arg decarboxylase K01584 - 4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 400.0
YHH3_k127_24888_0 MltA-interacting protein MipA K07274 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 303.0
YHH3_k127_2496592_0 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 504.0
YHH3_k127_2496592_1 Flagellar rod assembly protein muramidase FlgJ K02395 - - 0.0000000000000000000000000000000000000000000001113 171.0
YHH3_k127_2498019_0 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000002352 243.0
YHH3_k127_2498500_0 Two-component sensor kinase CbrA - - - 1.723e-216 675.0
YHH3_k127_2498500_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 323.0
YHH3_k127_2498500_2 membrane - - - 0.000000000000000000000000000000000000000000001503 166.0
YHH3_k127_2507974_0 receptor K02014,K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 302.0
YHH3_k127_2510841_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 3.887e-292 898.0
YHH3_k127_2510841_1 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 374.0
YHH3_k127_2510841_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 328.0
YHH3_k127_2513728_0 PFAM UDP-glucose GDP-mannose dehydrogenase family, NAD binding domain K02472 - 1.1.1.336 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 572.0
YHH3_k127_2513728_1 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000009116 117.0
YHH3_k127_2514127_0 Controls the transcription of genes involved in arginine and lysine metabolism K05596 GO:0003674,GO:0003676,GO:0003677,GO:0003681,GO:0003700,GO:0005488,GO:0006275,GO:0006355,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032297,GO:0043565,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0090329,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000104,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 404.0
YHH3_k127_2514127_1 LysE type translocator K06895 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002317 259.0
YHH3_k127_2514127_2 NIPSNAP family containing protein - - - 0.00000000000000000000000000000000000000000000002049 172.0
YHH3_k127_2514127_3 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000001365 143.0
YHH3_k127_2514549_0 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 375.0
YHH3_k127_2514549_1 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001745 281.0
YHH3_k127_2514549_2 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.000000000000000000000000000000000000003446 147.0
YHH3_k127_2514549_3 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.000000000000000000000000000005042 121.0
YHH3_k127_2519399_0 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 GO:0003674,GO:0005198,GO:0005575,GO:0005623,GO:0009288,GO:0009425,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 373.0
YHH3_k127_2519399_1 Flagellar assembly protein T, middle domain - - - 0.00000000000000000000000000000000000000000000000000000000000003994 225.0
YHH3_k127_2519399_2 protein conserved in bacteria K09860 - - 0.0000000000000000000000000000000000005675 144.0
YHH3_k127_2539095_0 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007122 438.0
YHH3_k127_2539095_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR - - - 0.00000000000000000000000000000000000000000000000000000008317 195.0
YHH3_k127_2554702_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.4e-322 989.0
YHH3_k127_2554702_1 Belongs to the GcvT family K06980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 518.0
YHH3_k127_2554702_2 Protein of unknown function (DUF2804) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008596 316.0
YHH3_k127_2554702_3 PFAM peptidylprolyl isomerase FKBP-type K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 300.0
YHH3_k127_2554702_4 Flavinator of succinate dehydrogenase K09159 - - 0.000000000000000000000000000000000000000000006952 163.0
YHH3_k127_2557378_0 Domain of unknown function (DUF4198) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 296.0
YHH3_k127_2559244_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate - - - 0.0 1042.0
YHH3_k127_2559244_1 Amidohydrolase family - - - 3.905e-226 704.0
YHH3_k127_2559244_2 UTRA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 442.0
YHH3_k127_2559244_3 Diguanylate cyclase - - - 0.00000000000008987 74.0
YHH3_k127_2578503_0 alpha amylase catalytic K05343 - 3.2.1.1,5.4.99.16 5.73e-321 987.0
YHH3_k127_2578503_1 sulphate transporter K03321 - - 6.03e-321 988.0
YHH3_k127_2578503_2 Major facilitator superfamily K16211 - - 2.053e-208 650.0
YHH3_k127_2578503_3 PFAM MORN variant repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008633 388.0
YHH3_k127_2579276_0 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 1.906e-276 850.0
YHH3_k127_2579276_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004436 282.0
YHH3_k127_2579276_2 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000000000000000000000000000000000000001821 212.0
YHH3_k127_2579276_3 Catalyzes the conversion of pppGpp to ppGpp. Guanosine pentaphosphate (pppGpp) is a cytoplasmic signaling molecule which together with ppGpp controls the stringent response , an adaptive process that allows bacteria to respond to amino acid starvation, resulting in the coordinated regulation of numerous cellular activities K01524 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006793,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008894,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0015949,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034641,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:1901360 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000003961 187.0
YHH3_k127_2585807_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 3.167e-249 779.0
YHH3_k127_2585807_1 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009827 438.0
YHH3_k127_2585807_2 PFAM ApaG domain protein K06195 - - 0.0000000000000000000000000000000000000000000000000000000000000002044 222.0
YHH3_k127_2607838_0 Thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006243 469.0
YHH3_k127_2607838_1 Belongs to the PAPS reductase family. CysH subfamily K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 462.0
YHH3_k127_2607838_2 C-terminal domain of 1-Cys peroxiredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 386.0
YHH3_k127_2607838_3 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00381 GO:0003674,GO:0003824,GO:0004783,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006790,GO:0008150,GO:0008152,GO:0009337,GO:0009987,GO:0016002,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016673,GO:0019419,GO:0020037,GO:0032991,GO:0044237,GO:0044424,GO:0044464,GO:0046906,GO:0048037,GO:0050311,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0097159,GO:1901363 1.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003877 274.0
YHH3_k127_2607838_4 META domain - - - 0.00000002003 61.0
YHH3_k127_2635722_0 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 5.67e-201 628.0
YHH3_k127_2635722_1 pfam php K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 521.0
YHH3_k127_2635722_10 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000007623 241.0
YHH3_k127_2635722_12 - - - - 0.000000000000000000000001816 104.0
YHH3_k127_2635722_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008116 505.0
YHH3_k127_2635722_3 PFAM Sulphatase-modifying factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612 472.0
YHH3_k127_2635722_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 445.0
YHH3_k127_2635722_5 Belongs to the SUA5 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 398.0
YHH3_k127_2635722_6 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 373.0
YHH3_k127_2635722_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 366.0
YHH3_k127_2635722_8 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 347.0
YHH3_k127_2635722_9 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003123 268.0
YHH3_k127_263896_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1165.0
YHH3_k127_263896_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0 999.0
YHH3_k127_263896_2 Glutaredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004154 346.0
YHH3_k127_263896_3 TIGRFAM nucleotidyltransferase substrate binding protein, HI0074 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007635 275.0
YHH3_k127_263896_4 PFAM DNA polymerase beta domain protein region - - - 0.0000000000000000000000006439 107.0
YHH3_k127_2650_0 ABC-type amino acid transport signal transduction systems periplasmic component K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000805 431.0
YHH3_k127_2650_1 of the alpha beta superfamily K06889 - - 0.00000000000000001796 84.0
YHH3_k127_2652722_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1020.0
YHH3_k127_2652722_1 PFAM RDD domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 321.0
YHH3_k127_2663981_0 PFAM Alpha-2-macroglobulin K06894 - - 0.0 1285.0
YHH3_k127_2663981_1 UPF0313 protein - - - 3.614e-206 643.0
YHH3_k127_2663981_2 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000000000000000000000000000000000000002592 227.0
YHH3_k127_2672213_0 non-ribosomal peptide synthetase - - - 0.0000000000000000000000000000000002166 146.0
YHH3_k127_2686132_0 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003357 505.0
YHH3_k127_2686132_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 300.0
YHH3_k127_2686132_2 protein conserved in bacteria K09897 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0007059,GO:0008150,GO:0009987,GO:0016043,GO:0044424,GO:0044444,GO:0044464,GO:0051276,GO:0071840 - 0.0000000000000000000000000000000000000000000000000000000000000007659 219.0
YHH3_k127_2686132_3 - - - - 0.00000000000000000000008322 99.0
YHH3_k127_2686132_4 Enoyl-CoA hydratase isomerase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.0000000000000000000004046 95.0
YHH3_k127_2687727_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 1e-323 994.0
YHH3_k127_2687727_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000002073 229.0
YHH3_k127_2687727_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000001056 228.0
YHH3_k127_2687727_3 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000000000000000000000000000005251 192.0
YHH3_k127_2687727_4 Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters K03557 - - 0.00000000000000000000000000000000000000000000000000004005 187.0
YHH3_k127_2687727_5 Plasmid maintenance system killer K07334 - - 0.00000000000000000000000000000000000000000000001157 172.0
YHH3_k127_2695083_0 Hydrolase of alkaline phosphatase superfamily K07014 - - 1.499e-224 703.0
YHH3_k127_2695083_1 protein conserved in bacteria K00243 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 494.0
YHH3_k127_2695083_2 Specifically methylates the adenine in position 1618 of 23S rRNA K06970 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008988,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052907,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 472.0
YHH3_k127_2695083_4 membrane - - - 0.00000000000000000000000528 103.0
YHH3_k127_2729161_0 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 298.0
YHH3_k127_2729161_1 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000000005813 209.0
YHH3_k127_2729161_2 kinase domain - - - 0.000000000000000000000000000000000000004454 151.0
YHH3_k127_2745768_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0 1141.0
YHH3_k127_2745768_1 COG0790 FOG TPR repeat, SEL1 subfamily K21217 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 330.0
YHH3_k127_2745768_2 COG0793 Periplasmic protease - - - 0.00000000000000002475 83.0
YHH3_k127_2853559_0 alpha-amylase K01176 GO:0005575,GO:0005576 3.2.1.1 2.727e-284 876.0
YHH3_k127_2853559_1 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 351.0
YHH3_k127_2864932_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009698 323.0
YHH3_k127_2864932_1 domain, Protein K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009358 290.0
YHH3_k127_2870099_0 MacB-like periplasmic core domain K02004 - - 4.256e-210 659.0
YHH3_k127_2870099_1 chemotaxis K03406 - - 0.00000000000000000000000000000000000000000000000000005251 193.0
YHH3_k127_2870099_2 PFAM ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000002285 180.0
YHH3_k127_2879821_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 4.944e-228 707.0
YHH3_k127_2879821_1 Tetrapyrrole (Corrin/Porphyrin) Methylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 295.0
YHH3_k127_2915402_0 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 2.655e-200 627.0
YHH3_k127_2915402_1 COG0500 SAM-dependent methyltransferases - - - 1.452e-196 619.0
YHH3_k127_2915402_2 Nucleotidyl transferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 293.0
YHH3_k127_2915402_4 PFAM NAD-glutamate dehydrogenase K15371 - 1.4.1.2 0.0000000000000000000000000013 111.0
YHH3_k127_2943900_0 COG2252 Permeases K06901 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006918 535.0
YHH3_k127_2965100_0 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 2.131e-242 756.0
YHH3_k127_2965100_1 Transcriptional regulator - - - 0.00000000009229 64.0
YHH3_k127_2973414_0 Receptor - - - 0.0 1415.0
YHH3_k127_2973414_1 Alpha amylase catalytic K00690 - 2.4.1.7 2.779e-288 891.0
YHH3_k127_2973414_2 Major facilitator superfamily - - - 2.709e-229 715.0
YHH3_k127_2973414_3 Transcriptional - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 578.0
YHH3_k127_2973414_4 COG0524 Sugar kinases, ribokinase family K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 439.0
YHH3_k127_2973414_5 belongs to the aldehyde dehydrogenase family K00135,K00141 - 1.2.1.16,1.2.1.20,1.2.1.28,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 409.0
YHH3_k127_2980371_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1185.0
YHH3_k127_2993370_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 313.0
YHH3_k127_2993370_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000004806 233.0
YHH3_k127_2993370_2 PFAM D12 class N6 adenine-specific DNA methyltransferase K06223 - 2.1.1.72 0.000000000000000000000000000000009811 128.0
YHH3_k127_2998444_0 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00651 - 2.3.1.46 3.827e-197 615.0
YHH3_k127_2998444_1 Methyl-accepting Chemotaxis protein - - - 0.00000000000000000004572 92.0
YHH3_k127_2999325_0 PFAM sodium alanine symporter K03310 - - 5.127e-276 851.0
YHH3_k127_2999325_1 TIGRFAM cation diffusion facilitator family transporter K16264 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 503.0
YHH3_k127_2999325_2 protein conserved in bacteria K09918 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0010165,GO:0010212,GO:0031668,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000000000001119 158.0
YHH3_k127_2999325_3 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000002742 137.0
YHH3_k127_3009355_0 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 553.0
YHH3_k127_3009355_1 acyl-CoA thioesterase K01073 - 3.1.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 318.0
YHH3_k127_3009355_2 DP-EP family - - - 0.000000000000000000000000000000000000000000000001688 177.0
YHH3_k127_3009355_3 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000005606 88.0
YHH3_k127_3010509_0 Serine dehydratase beta chain - - - 8.539e-286 881.0
YHH3_k127_3010509_1 Anthranilate synthase component I K01657,K01665 - 2.6.1.85,4.1.3.27 2.181e-259 804.0
YHH3_k127_3010509_2 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 342.0
YHH3_k127_3010509_3 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003025 317.0
YHH3_k127_3010509_4 Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria - - - 0.0000000000000000000000000000000000181 135.0
YHH3_k127_3020885_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 432.0
YHH3_k127_3020885_1 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001651 261.0
YHH3_k127_3020885_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.000000000000000000000000000000000000000000000000000000000001016 211.0
YHH3_k127_3020885_3 Protein of unknown function (DUF3718) - - - 0.00000000000000000000000000000000000000000000000000000001822 198.0
YHH3_k127_304223_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 2.057e-209 656.0
YHH3_k127_304223_1 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000003064 179.0
YHH3_k127_304223_2 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000001053 162.0
YHH3_k127_305902_0 His Kinase A (phosphoacceptor) domain - - - 3.941e-199 629.0
YHH3_k127_305902_1 response regulator receiver K07666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003312 370.0
YHH3_k127_305902_2 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 317.0
YHH3_k127_305902_3 )-iron permease K07243 - - 0.000000000000000000000000000000000000000000000000000000000000001716 225.0
YHH3_k127_305902_4 Cupredoxin-like domain - - - 0.0000000000000000000000000000000004786 135.0
YHH3_k127_3061636_0 protein conserved in bacteria K09989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 342.0
YHH3_k127_3061636_1 AAA domain (dynein-related subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000002967 232.0
YHH3_k127_3066119_0 TIGRFAM Serine O-acetyltransferase K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 522.0
YHH3_k127_3066119_1 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 465.0
YHH3_k127_3066119_2 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008157 417.0
YHH3_k127_3066119_3 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000007658 172.0
YHH3_k127_3066119_4 Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins K13643 - - 0.000000003542 58.0
YHH3_k127_3073953_0 Domain of unknown function (DUF4331) - - - 9.735e-257 795.0
YHH3_k127_3073953_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000001178 215.0
YHH3_k127_308830_0 TonB-dependent Receptor Plug K16089 - - 0.0 1345.0
YHH3_k127_308830_1 chitinase K01183 - 3.2.1.14 0.0 1324.0
YHH3_k127_308830_2 peptidase, M13 K01415,K07386 - 3.4.24.71 0.0 1228.0
YHH3_k127_308830_3 COG4772 Outer membrane receptor for Fe3 -dicitrate K16091 - - 1.205e-267 842.0
YHH3_k127_308830_4 Glutathionylspermidine synthase preATP-grasp - - - 1.43e-234 727.0
YHH3_k127_308830_5 2OG-Fe(II) oxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006793 428.0
YHH3_k127_308830_6 Protein of unknown function (DUF1190) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501 376.0
YHH3_k127_308830_7 Domain of Unknown Function (DUF350) K08989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002836 240.0
YHH3_k127_308830_8 thioesterase K07107 - - 0.0000000000000000000000000000000000000000000000000000005614 194.0
YHH3_k127_3096063_0 TIGRFAM glutaminyl-tRNA synthetase K01886 - 6.1.1.18 0.0 1106.0
YHH3_k127_3096063_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 383.0
YHH3_k127_3096063_2 threonine efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 280.0
YHH3_k127_3096063_3 Protein of unknown function (DUF3185) - - - 0.000000000000000000000000000007172 119.0
YHH3_k127_3096063_4 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.00008172 47.0
YHH3_k127_3110243_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533 - 3.6.3.4 0.0 1002.0
YHH3_k127_3110243_1 Transcriptional regulator K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 421.0
YHH3_k127_3110243_2 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 340.0
YHH3_k127_3110243_3 Universal stress protein family K14055 - - 0.00000000000000000000000000000000000000000000000001855 182.0
YHH3_k127_3110243_4 TIGRFAM cytochrome oxidase maturation protein, cbb3-type - - - 0.00000000000000001131 83.0
YHH3_k127_3122571_0 COG1073 Hydrolases of the alpha beta superfamily - - - 5.17e-305 946.0
YHH3_k127_3123441_0 redox-sensitive transcriptional activator SoxR K13639 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0044424,GO:0044464,GO:0048037,GO:0050896,GO:0051536,GO:0051537,GO:0051540 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004164 280.0
YHH3_k127_3123441_1 COG0346 Lactoylglutathione lyase and related lyases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007156 273.0
YHH3_k127_3123441_2 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003059 244.0
YHH3_k127_3123441_3 Tricorn protease C1 domain K08676 - - 0.00000000000000000000000000000000000000000000000000000000007557 204.0
YHH3_k127_3123441_4 flavoprotein - - - 0.000000000000000000000000000000000000000000000002147 179.0
YHH3_k127_3123441_5 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000000000000000000000000000000000008278 150.0
YHH3_k127_3123441_6 Diguanylate cyclase K21021 - 2.7.7.65 0.0000000000000000000000000000000000000061 148.0
YHH3_k127_3139203_0 Phage tail sheath protein K06907 - - 3.22e-204 642.0
YHH3_k127_3139203_1 Protein of unknown function (DUF4255) - - - 0.0000000000000000000000000000000000000000000000000003858 190.0
YHH3_k127_3139203_2 - - - - 0.0000000000000000000001808 107.0
YHH3_k127_3146409_0 Type II secretory pathway component ExeA K02450,K12283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006679 491.0
YHH3_k127_3146409_1 Secretin N-terminal domain K12282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001434 273.0
YHH3_k127_3146855_0 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 326.0
YHH3_k127_3146855_1 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002318 265.0
YHH3_k127_3146855_2 PFAM response regulator receiver - - - 0.0000000000003236 69.0
YHH3_k127_3155011_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.0 1787.0
YHH3_k127_3155011_1 AefR-like transcriptional repressor, C-terminal region K18301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004294 280.0
YHH3_k127_3155011_2 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003002 238.0
YHH3_k127_3155011_3 DoxX - - - 0.00000000000000000000000004481 107.0
YHH3_k127_3161296_0 Belongs to the CarA family K01956 - 6.3.5.5 1.084e-235 732.0
YHH3_k127_3161296_1 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009058 471.0
YHH3_k127_3161296_2 Belongs to the CarB family K01955 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008672 263.0
YHH3_k127_3161296_3 Iron-containing alcohol dehydrogenase K08325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006675 258.0
YHH3_k127_3181624_0 PFAM Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006764 527.0
YHH3_k127_3181624_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 405.0
YHH3_k127_3181624_2 SCO1 SenC K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001576 282.0
YHH3_k127_3201141_0 penicillin amidase K01434 - 3.5.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 580.0
YHH3_k127_3201141_1 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 316.0
YHH3_k127_3201141_2 Cytochrome C556 - - - 0.00000000000000000000000000000000000000000000000000000000000000000006162 234.0
YHH3_k127_3201141_3 Diguanylate cyclase - - - 0.00000000000000000000000000000001569 130.0
YHH3_k127_3205494_0 Endonuclease Exonuclease phosphatase K07004 - - 7.589e-269 839.0
YHH3_k127_3205494_1 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006497 596.0
YHH3_k127_3205494_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 GO:0002943,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050896,GO:0055114,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 391.0
YHH3_k127_3205494_3 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000009698 59.0
YHH3_k127_3211174_0 Acyltransferase - - - 5.108e-308 946.0
YHH3_k127_3211174_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 499.0
YHH3_k127_3211174_2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 343.0
YHH3_k127_3212731_0 Carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006613 601.0
YHH3_k127_3212731_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 367.0
YHH3_k127_3212731_2 response regulator K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003793 346.0
YHH3_k127_3212731_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004854 349.0
YHH3_k127_3212731_4 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000006271 230.0
YHH3_k127_3212731_5 S4 domain K14761 - - 0.00000000002368 63.0
YHH3_k127_3217401_0 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 1.057e-267 830.0
YHH3_k127_3217401_1 PFAM CBS domain K06189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005276 544.0
YHH3_k127_3217401_2 PA domain - - - 0.00000000000000000000000000000000000000000000000000000004088 199.0
YHH3_k127_3217401_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000184 78.0
YHH3_k127_3244317_0 COG3170 Tfp pilus assembly protein FimV K08086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 406.0
YHH3_k127_3255705_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003299 502.0
YHH3_k127_3255705_1 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 457.0
YHH3_k127_3275433_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1391.0
YHH3_k127_3275433_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002905 280.0
YHH3_k127_329234_0 Diguanylate cyclase - - - 9.832e-208 651.0
YHH3_k127_329234_1 Belongs to the arginase family K01479 - 3.5.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006132 460.0
YHH3_k127_3314885_0 oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000395 349.0
YHH3_k127_3314885_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000002194 121.0
YHH3_k127_3326664_0 Sugar transferase, PEP-CTERM EpsH1 system associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 610.0
YHH3_k127_3326664_1 Transmembrane exosortase (Exosortase_EpsH) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003369 288.0
YHH3_k127_3326664_2 TIGRFAM FemAB-related protein, PEP-CTERM system-associated - - - 0.000000000002156 66.0
YHH3_k127_3339973_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 603.0
YHH3_k127_3339973_1 PFAM peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.00000000000000000000000006556 108.0
YHH3_k127_3350346_0 ABC-type antimicrobial peptide transport system, permease component - - - 0.0 1262.0
YHH3_k127_3350346_1 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003657 424.0
YHH3_k127_3350346_2 COG0845 Membrane-fusion protein - - - 0.0000000004945 61.0
YHH3_k127_3350674_0 CHASE - - - 1.83e-264 827.0
YHH3_k127_3350674_1 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003846 427.0
YHH3_k127_3361054_0 response regulator receiver - - - 2.174e-206 646.0
YHH3_k127_3407651_0 COG0457 FOG TPR repeat K12284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000212 272.0
YHH3_k127_3407651_1 Secretion system protein K12276 - - 0.00000000000000000000000000000000001967 136.0
YHH3_k127_3413332_0 ATPase FliI YscN family K02412 - 3.6.3.14 2.423e-258 799.0
YHH3_k127_3413332_1 flagellar assembly protein FliH K02411 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 340.0
YHH3_k127_3434606_0 Rhamnan synthesis protein F - - - 0.0000000000000000000000000000000000000000000000000000000000002386 230.0
YHH3_k127_3434606_1 Glycosyl transferases group 1 K13004,K21011 - - 0.00000000000000000000000000006097 118.0
YHH3_k127_3457745_0 DNA RNA helicase - - - 0.0 1131.0
YHH3_k127_3457745_1 MMPL family K07003 - - 1.071e-198 627.0
YHH3_k127_3457745_2 COG3170 Tfp pilus assembly protein FimV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 537.0
YHH3_k127_3457745_3 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 375.0
YHH3_k127_3457745_4 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000947 272.0
YHH3_k127_3457745_5 - - - - 0.000000000000000000000000000000000000000000000000000007056 198.0
YHH3_k127_346626_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00018 - 1.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 342.0
YHH3_k127_3467946_0 PFAM Transglutaminase-like K22452 - 2.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007582 497.0
YHH3_k127_3467946_1 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009701 323.0
YHH3_k127_3485815_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 589.0
YHH3_k127_3502057_0 Phage tail protein (Tail_P2_I) - - - 0.00000000000000000000000000000000000000000000000000000000000001946 234.0
YHH3_k127_3503512_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 492.0
YHH3_k127_3503512_1 response regulator receiver - - - 0.000000000003094 68.0
YHH3_k127_3503561_0 YcjX-like family, DUF463 K06918 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 361.0
YHH3_k127_3503561_1 phage shock protein C K03973 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010556,GO:0010557,GO:0010604,GO:0016020,GO:0019222,GO:0044464,GO:0048518,GO:0050789,GO:0060255,GO:0065007,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000002045 237.0
YHH3_k127_3503561_2 Phage shock protein B K03970 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000004526 54.0
YHH3_k127_3518935_0 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 422.0
YHH3_k127_3526559_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.278e-257 795.0
YHH3_k127_3526559_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 608.0
YHH3_k127_3526559_2 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 296.0
YHH3_k127_3526559_3 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.0000000000000000001281 89.0
YHH3_k127_3537612_0 Lysophospholipase K01048 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0008150,GO:0008152,GO:0016020,GO:0016298,GO:0016740,GO:0016746,GO:0016747,GO:0016787,GO:0016788,GO:0044238,GO:0044464,GO:0052689,GO:0071704,GO:0071944 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 444.0
YHH3_k127_3537612_1 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 281.0
YHH3_k127_3537612_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000002906 139.0
YHH3_k127_3537612_3 cyclic-guanylate-specific phosphodiesterase activity - - - 0.000000000000000001156 90.0
YHH3_k127_3537808_0 COG1070 Sugar (pentulose and hexulose) kinases K00854 GO:0003674,GO:0003824,GO:0004856,GO:0005975,GO:0005996,GO:0005997,GO:0005998,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019321,GO:0019323,GO:0042732,GO:0042843,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0046365,GO:0046835,GO:0071704,GO:1901575 2.7.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 573.0
YHH3_k127_3537808_1 transcriptional regulator K02529 GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000002003 144.0
YHH3_k127_3580237_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18989 - - 3.772e-319 983.0
YHH3_k127_3580237_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18990 - - 0.000000000000000000000000000000000000000000000000000000000000009625 217.0
YHH3_k127_3596764_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 344.0
YHH3_k127_3596764_1 Peptidase S46 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 319.0
YHH3_k127_3596764_2 regulation of DNA repair K03565 GO:0003674,GO:0006282,GO:0008150,GO:0019219,GO:0019222,GO:0030234,GO:0031323,GO:0048583,GO:0050789,GO:0050790,GO:0050794,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0065009,GO:0080090,GO:0080134,GO:0080135,GO:0098772,GO:2001020 - 0.0000000001804 61.0
YHH3_k127_360729_0 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008628 570.0
YHH3_k127_360729_1 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 377.0
YHH3_k127_360729_2 COG0848 Biopolymer transport protein - - - 0.00000000000000000000000000000000000000000003209 166.0
YHH3_k127_360729_3 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000002882 135.0
YHH3_k127_360729_4 - - - - 0.000000000000000000000000000001427 124.0
YHH3_k127_360729_5 biopolymer transport protein - - - 0.000000000000000000001377 96.0
YHH3_k127_3644173_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.0 1077.0
YHH3_k127_3644173_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006049 511.0
YHH3_k127_3644173_2 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000661 61.0
YHH3_k127_3651557_0 Thermostable hemolysin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 321.0
YHH3_k127_3651557_1 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002828 316.0
YHH3_k127_3651557_2 transcriptional regulator K06211 GO:0000166,GO:0000287,GO:0000309,GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005524,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009268,GO:0009435,GO:0009628,GO:0009987,GO:0010035,GO:0010038,GO:0010446,GO:0016043,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0022607,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043565,GO:0043933,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0046872,GO:0050896,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051716,GO:0055086,GO:0065003,GO:0070566,GO:0070887,GO:0071241,GO:0071248,GO:0071704,GO:0071840,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990837 2.7.1.22,2.7.7.1 0.0000000000000000000000000000000000000000000000000000000000000000001931 231.0
YHH3_k127_3681065_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 400.0
YHH3_k127_3681065_1 oxidoreductase - - - 0.00000000621 56.0
YHH3_k127_3681065_2 - - - - 0.000000008464 58.0
YHH3_k127_3707522_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 596.0
YHH3_k127_3707522_1 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005904 549.0
YHH3_k127_3707522_2 redox protein, regulator of disulfide bond formation K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002068 240.0
YHH3_k127_3707522_3 Protein of unknown function (DUF3802) - - - 0.00000000000000000000000000000000000000000000000000000003767 198.0
YHH3_k127_3754177_0 COG0840 Methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006328 535.0
YHH3_k127_3755280_0 response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007313 571.0
YHH3_k127_3755280_1 signal transduction Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 502.0
YHH3_k127_3755280_2 COG0845 Membrane-fusion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 424.0
YHH3_k127_3755280_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009314,GO:0009380,GO:0009381,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.00000000000000000001138 91.0
YHH3_k127_3758940_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.0 1393.0
YHH3_k127_3758940_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000002451 81.0
YHH3_k127_3758940_2 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000001915 70.0
YHH3_k127_3796318_0 F5/8 type C domain - - - 8.117e-213 687.0
YHH3_k127_3796318_1 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 583.0
YHH3_k127_3797337_0 PFAM AMP-dependent synthetase and ligase - - - 6.62e-238 747.0
YHH3_k127_3797337_1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01586 - 4.1.1.20 1.368e-209 658.0
YHH3_k127_3797337_2 alginic acid biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 340.0
YHH3_k127_3797337_3 PFAM UDP-glucose GDP-mannose dehydrogenase family, NAD binding domain K02472 - 1.1.1.336 0.00000000000000000000000000000000000000000000000000000002916 197.0
YHH3_k127_3797337_4 Phosphopantetheine attachment site - - - 0.00000000000000000000000000000053 124.0
YHH3_k127_3797337_5 TIGRFAM Hydrolase, ortholog 1, exosortase system type 1 associated - - - 0.0000000000000005807 81.0
YHH3_k127_3815271_0 Serine aminopeptidase, S33 K00433 - 1.11.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 302.0
YHH3_k127_3815271_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004224 309.0
YHH3_k127_3815271_2 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005826 260.0
YHH3_k127_3815271_3 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.0000000000000000000000008736 104.0
YHH3_k127_3815271_4 Diguanylate cyclase - - - 0.000000000000001271 91.0
YHH3_k127_3853068_0 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 - 3.6.4.13 0.0 1097.0
YHH3_k127_3853068_1 COG0308 Aminopeptidase N - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001136 269.0
YHH3_k127_3864643_0 TraT complement resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 385.0
YHH3_k127_3864643_1 TraT complement resistance - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 289.0
YHH3_k127_3870232_0 TIGRFAM ATP-dependent DNA helicase, RecQ K03654 - 3.6.4.12 2.373e-298 918.0
YHH3_k127_3878339_0 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 467.0
YHH3_k127_3878339_1 Divergent polysaccharide deacetylase K09798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000911 273.0
YHH3_k127_3879408_0 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003305 591.0
YHH3_k127_3879408_1 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003845 419.0
YHH3_k127_3879408_2 Domain of unknown function (DUF2383) - - - 0.00000000000000000000000000000000000000000000000000000000000000000007413 234.0
YHH3_k127_390246_0 TonB-dependent Receptor Plug K16092 - - 5.779e-252 784.0
YHH3_k127_390246_1 Flavin containing amine oxidoreductase K06955 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 391.0
YHH3_k127_390246_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 291.0
YHH3_k127_390246_3 short chain dehydrogenase - - - 0.00000000005596 66.0
YHH3_k127_3906879_0 Flagellar hook protein FlgE K02390 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000326 470.0
YHH3_k127_3906879_1 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.00000000000000000000000000000000000000000000000000000000001104 213.0
YHH3_k127_3906879_2 PFAM flagellar basal body rod protein K02391 - - 0.00000000000000000000000001795 109.0
YHH3_k127_3906879_3 Belongs to the flagella basal body rod proteins family K02388 - - 0.000000000000000002153 84.0
YHH3_k127_3917817_0 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 1.805e-200 631.0
YHH3_k127_3917817_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009655 513.0
YHH3_k127_3917817_2 Colicin V production protein K03558 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 289.0
YHH3_k127_3917817_3 Sporulation related domain K03749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003357 275.0
YHH3_k127_392636_0 Iron-containing alcohol dehydrogenase K08325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008717 591.0
YHH3_k127_392636_1 intracellular protease amidase - - - 0.000000000000000000000000000000000000000000000000001118 184.0
YHH3_k127_3932997_0 TonB-dependent Receptor Plug K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 614.0
YHH3_k127_3932997_1 PFAM Glucose Sorbosone dehydrogenase - - - 0.0000000002866 60.0
YHH3_k127_3939219_0 5TM C-terminal transporter carbon starvation CstA K06200 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042594,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051716,GO:0071496,GO:0071944 - 1.888e-239 745.0
YHH3_k127_3939219_1 diguanylate cyclase - - - 3.577e-207 659.0
YHH3_k127_394333_0 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003428 433.0
YHH3_k127_394333_1 PFAM Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000000000000000003312 226.0
YHH3_k127_3949732_0 Serine threonine protein kinase involved in cell cycle control K07178 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005704 506.0
YHH3_k127_3949732_1 Esterase PHB depolymerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 413.0
YHH3_k127_3949732_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000161 235.0
YHH3_k127_3949732_3 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000006289 222.0
YHH3_k127_3949732_4 relative of glutathione S-transferase, MAPEG superfamily K07136 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000001372 194.0
YHH3_k127_3949732_5 - - - - 0.00000000000000000000000000000000000000000000000009333 187.0
YHH3_k127_3949732_6 - - - - 0.0000000000000000000000000000000000000000002261 164.0
YHH3_k127_3952052_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 314.0
YHH3_k127_3952052_1 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 289.0
YHH3_k127_3952052_2 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.00000002525 55.0
YHH3_k127_3952052_3 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 GO:0000166,GO:0003674,GO:0003824,GO:0004638,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0016874,GO:0016879,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034028,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.4.18 0.00005159 46.0
YHH3_k127_3952910_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005848 444.0
YHH3_k127_3952910_1 - - - - 0.000000000007023 66.0
YHH3_k127_3953714_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 527.0
YHH3_k127_3953714_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.000000000000000000000004257 101.0
YHH3_k127_396416_0 PFAM amino acid permease-associated region K03294 - - 1.796e-214 671.0
YHH3_k127_396416_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 345.0
YHH3_k127_396416_2 synthase III K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000004132 170.0
YHH3_k127_3970062_0 COG0464 ATPases of the AAA class K06027 - 3.6.4.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005004 379.0
YHH3_k127_3970062_1 Domain of unknown function (DUF4157) - - - 0.0000000000000000001818 95.0
YHH3_k127_3972695_0 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 2.129e-205 642.0
YHH3_k127_3972695_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 1.302e-199 626.0
YHH3_k127_3972695_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007134 436.0
YHH3_k127_3972695_3 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005061 410.0
YHH3_k127_3972695_4 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 363.0
YHH3_k127_3972695_5 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000001308 259.0
YHH3_k127_3972695_6 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000000000000000000000000000000000000294 183.0
YHH3_k127_3972695_7 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000000000000000002624 140.0
YHH3_k127_3977881_0 Belongs to the mannose-6-phosphate isomerase type 2 family K00971,K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 360.0
YHH3_k127_3977881_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 303.0
YHH3_k127_3977881_2 Belongs to the glycosyltransferase 26 family K05946 - 2.4.1.187 0.000000000000000000000000000000000000000000000000000000000000008491 224.0
YHH3_k127_3977881_3 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000006896 196.0
YHH3_k127_3981158_0 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004413,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006566,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009088,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 496.0
YHH3_k127_3981158_1 Belongs to the aspartokinase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 406.0
YHH3_k127_3985668_0 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 507.0
YHH3_k127_3985668_1 Protein tyrosine kinase K08282,K11916,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 426.0
YHH3_k127_3985668_2 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 388.0
YHH3_k127_3985668_3 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 362.0
YHH3_k127_3985668_4 Forkhead associated domain K07169,K11894,K11913 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004645 283.0
YHH3_k127_3985668_5 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 K11906 - - 0.000000000000000000000000000000000000000000000173 172.0
YHH3_k127_3985668_6 protein conserved in bacteria K11893 - - 0.0000000001344 63.0
YHH3_k127_3989167_0 helix_turn _helix lactose operon repressor K06145 - - 7.78e-197 615.0
YHH3_k127_3989167_1 TonB-dependent Receptor Plug Domain K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 471.0
YHH3_k127_3989465_0 Protein of unknown function - - - 6.429e-284 886.0
YHH3_k127_3989465_1 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.000000000000001624 80.0
YHH3_k127_39913_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008805 563.0
YHH3_k127_39913_1 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000006332 141.0
YHH3_k127_4017302_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006464 603.0
YHH3_k127_4017302_1 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000006733 167.0
YHH3_k127_404515_0 Hydrolase Family 16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 578.0
YHH3_k127_404515_1 COG4240 Predicted kinase K15918 - 2.7.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001704 269.0
YHH3_k127_404515_2 COG4240 Predicted kinase K15918 - 2.7.1.31 0.00000000000000000002254 95.0
YHH3_k127_404515_3 fatty acid transporter K02106 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000008019 68.0
YHH3_k127_404515_4 Citrate transporter - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0004362 43.0
YHH3_k127_4050117_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0 1689.0
YHH3_k127_4050117_1 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006058 528.0
YHH3_k127_4050117_2 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 523.0
YHH3_k127_4050117_3 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 474.0
YHH3_k127_4050117_4 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 289.0
YHH3_k127_4050117_5 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000004523 126.0
YHH3_k127_4089068_0 Belongs to the peptidase S16 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007641 353.0
YHH3_k127_4089068_1 DoxX - - - 0.00000000000000000000000000000000000000000000000000000000001613 207.0
YHH3_k127_4104251_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000009736 243.0
YHH3_k127_4104251_1 AAA domain - - - 0.00000000000000000000000000000000001173 136.0
YHH3_k127_4106614_0 type IV pilus assembly PilZ - - - 2.025e-313 973.0
YHH3_k127_4106614_1 phosphoserine phosphatase SerB K01079 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 449.0
YHH3_k127_4106614_2 membrane protein affecting hemolysin expression K07186 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 325.0
YHH3_k127_4106614_3 COG0084 Mg-dependent DNase K03424 - - 0.00000000000000000002005 91.0
YHH3_k127_4124974_0 Mn2 and Fe2 transporters of the NRAMP family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004212 242.0
YHH3_k127_4124974_2 GCN5-related N-acetyl-transferase K06975 - - 0.000000000000000000000000000000000001384 139.0
YHH3_k127_4128319_0 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008216 488.0
YHH3_k127_4128319_1 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K14160 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 295.0
YHH3_k127_4128319_2 - - - - 0.000000000000000000004211 96.0
YHH3_k127_4128319_3 Catalyzes the formation of 5-methyl-uridine at position 747 (m5U747) in 23S rRNA K03212 - 2.1.1.189 0.0000000000000002671 78.0
YHH3_k127_4129097_0 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 GO:0001539,GO:0003674,GO:0005198,GO:0005575,GO:0005576,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009420,GO:0009421,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0097588 - 4.472e-244 760.0
YHH3_k127_4129097_1 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005371 391.0
YHH3_k127_4129097_2 flagellar protein FliS K02422 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006784 259.0
YHH3_k127_4129097_3 flagellar protein FlaG K06603 - - 0.000000000000000000000000000000000004032 137.0
YHH3_k127_4152739_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1362.0
YHH3_k127_4152739_1 periplasmic ligand-binding sensor domain - - - 1.879e-204 648.0
YHH3_k127_4152739_2 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004944 362.0
YHH3_k127_4152739_3 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009238 300.0
YHH3_k127_4152739_4 Bacterial extracellular solute-binding proteins, family 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 303.0
YHH3_k127_4152739_5 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000003251 261.0
YHH3_k127_4152739_6 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000000000000000000000000000000000002826 248.0
YHH3_k127_4152739_7 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000000000000000000000000000001204 174.0
YHH3_k127_4166289_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009898 539.0
YHH3_k127_4166289_1 regulation of DNA repair K03565 GO:0003674,GO:0006282,GO:0008150,GO:0019219,GO:0019222,GO:0030234,GO:0031323,GO:0048583,GO:0050789,GO:0050790,GO:0050794,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0065009,GO:0080090,GO:0080134,GO:0080135,GO:0098772,GO:2001020 - 0.0000000000000000000000000000000000000000000000000000005106 194.0
YHH3_k127_4174696_0 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 593.0
YHH3_k127_4174696_1 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 556.0
YHH3_k127_4174696_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003661 447.0
YHH3_k127_4174696_3 COG NOG14600 non supervised orthologous group - - - 0.0000000000000000000000000000000003555 130.0
YHH3_k127_4174696_4 - - - - 0.0000000000005831 69.0
YHH3_k127_4175393_0 TonB-dependent Receptor Plug K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 512.0
YHH3_k127_4177767_0 domain, Protein K20276 - - 2.117e-225 707.0
YHH3_k127_4180107_0 UDP binding domain K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 349.0
YHH3_k127_4180107_1 glycosyl transferase family 2 K20444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001778 279.0
YHH3_k127_4189246_0 COG0075 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004806 572.0
YHH3_k127_4189246_1 Eukaryotic aspartyl protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 449.0
YHH3_k127_4190920_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1048.0
YHH3_k127_4190920_1 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 481.0
YHH3_k127_4190920_2 Role in flagellar biosynthesis K02421 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 336.0
YHH3_k127_4190920_3 bacterial-type flagellum assembly K02420 - - 0.0000000006406 59.0
YHH3_k127_4195863_0 membrane carboxypeptidase (Penicillin-binding protein) - - - 0.0 1093.0
YHH3_k127_4195863_1 diguanylate cyclase - - - 0.000000000000000001932 85.0
YHH3_k127_4202873_0 Receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004851 604.0
YHH3_k127_4207900_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 4.535e-297 913.0
YHH3_k127_4207900_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 1.194e-206 646.0
YHH3_k127_4207900_2 inhibitor of MCP methylation, homolog of CheC K03409 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005773 275.0
YHH3_k127_4207900_3 binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007172 270.0
YHH3_k127_4207900_4 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003475 249.0
YHH3_k127_4207900_5 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.000000000000000000000000000000000000000000000000000000008878 198.0
YHH3_k127_4207900_6 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000000000007575 151.0
YHH3_k127_4209097_0 Protein of unknown function (DUF3379) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 305.0
YHH3_k127_4209097_1 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000008664 145.0
YHH3_k127_4215441_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005706 293.0
YHH3_k127_4215441_1 protein conserved in bacteria K09986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002323 268.0
YHH3_k127_4215441_2 Mechanosensitive ion channel K03442 - - 0.00000000000000000000000003013 109.0
YHH3_k127_4217170_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006615 455.0
YHH3_k127_4217170_1 Protein of unknown function (DUF2892) - - - 0.00000000000000000000000003367 109.0
YHH3_k127_4220961_0 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.0000000000000000000000000000000000000000000000003042 179.0
YHH3_k127_4220961_1 bacterial-type flagellum organization K02279,K02386 - - 0.00000000000000000000000000000000000000000005399 173.0
YHH3_k127_4220961_2 Belongs to the flagella basal body rod proteins family K02388 - - 0.00000000000000000000000000000000003887 135.0
YHH3_k127_4220961_4 Polymer-forming cytoskeletal - - - 0.0000000000000000000001507 100.0
YHH3_k127_4230453_0 Phage tail sheath protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003381 415.0
YHH3_k127_4230453_1 Phage late control gene D protein (GPD) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001845 259.0
YHH3_k127_4230453_2 LysM domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003141 244.0
YHH3_k127_4230453_3 T4-like virus tail tube protein gp19 - - - 0.00000000000000000000000000000000000000000000000000000000008463 208.0
YHH3_k127_4230453_4 PFAM Phage-related baseplate assembly protein - - - 0.000000000000000000000000000000000000003105 152.0
YHH3_k127_4230453_5 T4-like virus tail tube protein gp19 - - - 0.0000000000000000000000000000000000001303 143.0
YHH3_k127_4239926_0 TIGRFAM Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 301.0
YHH3_k127_4239926_1 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000009765 254.0
YHH3_k127_4239926_2 Mn2 and Fe2 transporters of the NRAMP family - - - 0.00000000000000000000000000000000000000000000000000001127 190.0
YHH3_k127_4254292_0 PFAM sodium alanine symporter - - - 3.862e-227 706.0
YHH3_k127_4254292_1 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008138 364.0
YHH3_k127_4254292_2 Chromate transporter K07240 - - 0.00000000000000003361 83.0
YHH3_k127_427540_0 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 483.0
YHH3_k127_427540_1 kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 346.0
YHH3_k127_428738_0 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 - 2.7.11.5 5.18e-226 702.0
YHH3_k127_428738_1 COG0564 Pseudouridylate synthases, 23S RNA-specific K06177 - 5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 488.0
YHH3_k127_428738_2 DTW domain containing protein K05812 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 391.0
YHH3_k127_428738_3 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 317.0
YHH3_k127_428738_4 Belongs to the UPF0178 family K09768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004186 274.0
YHH3_k127_428738_5 S4 domain K14761 - - 0.0008002 42.0
YHH3_k127_4332084_0 Outer membrane receptor proteins mostly Fe transport - - - 0.0 1507.0
YHH3_k127_4332084_1 PFAM aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 382.0
YHH3_k127_4335357_0 histidine kinase HAMP region domain protein - - - 1.118e-202 642.0
YHH3_k127_4335357_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 462.0
YHH3_k127_4344323_0 Type VI secretion system, TssF K11896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 348.0
YHH3_k127_4344323_1 Gene 25-like lysozyme K11897 - - 0.0000000000000000000000000000000000000000000000000000002588 198.0
YHH3_k127_4345199_0 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 2.563e-214 667.0
YHH3_k127_4345199_1 PFAM Magnesium chelatase, ChlI subunit K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 429.0
YHH3_k127_4345199_2 COG0471 Di- and tricarboxylate transporters - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 291.0
YHH3_k127_4348448_0 Tryptophan halogenase K14266 - 1.14.19.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 565.0
YHH3_k127_4348448_1 Cupin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007749 388.0
YHH3_k127_4348448_2 SapC - - - 0.0000000000000000000000000000000000000001583 153.0
YHH3_k127_4349544_0 AMP-binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009636 320.0
YHH3_k127_4349544_1 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006419 308.0
YHH3_k127_4349544_2 Membrane - - - 0.000000000000000000000000000007881 126.0
YHH3_k127_4349544_3 acyl carrier protein K02078 - - 0.000000000000000000000000001916 113.0
YHH3_k127_4349544_4 Phosphopantetheine attachment site K02078 - - 0.00000000000000000000000001199 111.0
YHH3_k127_4349544_5 3-hydroxymyristoyl 3-hydroxydecanoyl-(acyl carrier protein) - - - 0.0000000000000000001092 94.0
YHH3_k127_4349544_6 Bacterial lipid A biosynthesis acyltransferase - - - 0.00001655 49.0
YHH3_k127_4354203_0 Baseplate J-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003979 371.0
YHH3_k127_4354203_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007268 249.0
YHH3_k127_4354203_2 protein of Photorhabdus and some similarities with - - - 0.00000000000000000000000000000000000000000002477 172.0
YHH3_k127_4356555_0 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005396 419.0
YHH3_k127_4356555_1 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.000000000000000001491 88.0
YHH3_k127_4356555_2 Dipeptidyl peptidase IV - - - 0.0000000000003462 72.0
YHH3_k127_4356555_3 hydrolase, TatD family K03424 - - 0.000000000001252 69.0
YHH3_k127_435684_0 Belongs to the GST superfamily K11209 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007375 467.0
YHH3_k127_435684_1 alpha/beta hydrolase fold - - - 0.00000000000000005168 80.0
YHH3_k127_4371515_0 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007022 523.0
YHH3_k127_4371515_1 FixH K09926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 294.0
YHH3_k127_4371515_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533 - 3.6.3.4 0.0000000000000000000000000000000000000000000000000000000004888 203.0
YHH3_k127_4378890_0 Cytochrome C biogenesis protein transmembrane region - - - 0.0 1052.0
YHH3_k127_4378890_1 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 342.0
YHH3_k127_4378890_2 signal transduction protein containing sensor and EAL domains - - - 0.00000000000000000000000000000000000000000000000000000000000006393 225.0
YHH3_k127_4378890_3 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000002542 210.0
YHH3_k127_438640_0 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor - - - 5.041e-292 923.0
YHH3_k127_438640_1 TIGRFAM Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 379.0
YHH3_k127_4394517_0 TIGRFAM Oxaloacetate decarboxylase, alpha subunit K01571 - 4.1.1.3 1.528e-308 948.0
YHH3_k127_4394517_1 oxaloacetate decarboxylase gamma chain K01573 GO:0003674,GO:0003824,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008150,GO:0008948,GO:0015672,GO:0016829,GO:0016830,GO:0016831,GO:0030001,GO:0051179,GO:0051234 4.1.1.3 0.00000000000000000006187 91.0
YHH3_k127_4396655_0 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 506.0
YHH3_k127_4396655_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002916 244.0
YHH3_k127_4396655_2 peptidase - - - 0.000000000000000000000001119 118.0
YHH3_k127_4443063_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 4.963e-229 710.0
YHH3_k127_4543026_0 Cys/Met metabolism PLP-dependent enzyme K01760 - 4.4.1.8 8.009e-234 725.0
YHH3_k127_4543026_1 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.0000000000000000786 83.0
YHH3_k127_4543312_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.0 1350.0
YHH3_k127_4543312_1 Tryptophan halogenase K14266 - 1.14.19.9 1.374e-271 842.0
YHH3_k127_4543312_2 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 424.0
YHH3_k127_4543312_3 Cupin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 384.0
YHH3_k127_4543312_4 SapC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004217 283.0
YHH3_k127_4544368_0 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 473.0
YHH3_k127_4544368_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 422.0
YHH3_k127_4544368_2 His Kinase A (phosphoacceptor) domain K18143 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 403.0
YHH3_k127_4544368_3 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000000000000000000000000000000000000007943 230.0
YHH3_k127_4544368_4 COG3668 Plasmid stabilization system protein K19092 - - 0.000000000000000000000000000000004145 130.0
YHH3_k127_4544368_5 addiction module antidote protein, CC2985 family K07746 - - 0.00000000000000000000001575 102.0
YHH3_k127_4544368_6 COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01028 - 2.8.3.5 0.0000000006814 60.0
YHH3_k127_4545160_0 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 362.0
YHH3_k127_4545160_1 AraC family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 340.0
YHH3_k127_4545160_2 Protein of unknown function (DUF2891) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 314.0
YHH3_k127_4545160_3 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 316.0
YHH3_k127_4545160_4 Esterase lipase - - - 0.0000000000000000000000000002249 116.0
YHH3_k127_4546171_0 single-stranded-DNA-specific exonuclease RecJ K07462 - - 3.042e-285 880.0
YHH3_k127_4546293_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 8.752e-287 894.0
YHH3_k127_4546293_1 Protein involved in outer membrane biogenesis - - - 0.00000001195 56.0
YHH3_k127_4582188_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 7.176e-242 749.0
YHH3_k127_4582188_1 TIGRFAM type IV pilus biogenesis stability protein PilW K02656 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000796 306.0
YHH3_k127_4582188_2 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000002349 197.0
YHH3_k127_4595050_0 FAD dependent oxidoreductase K09471 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 427.0
YHH3_k127_4595050_1 TonB-dependent Receptor Plug K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 353.0
YHH3_k127_4615027_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 7.232e-206 641.0
YHH3_k127_4615027_1 Belongs to the DnaA family. HdA subfamily K10763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 412.0
YHH3_k127_4615027_2 Uncharacterized protein conserved in bacteria (DUF2066) K09938 - - 0.00000000000000000000000000000000001501 141.0
YHH3_k127_4615174_0 basal body rod protein K02392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008932 493.0
YHH3_k127_4615174_1 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 366.0
YHH3_k127_4615174_2 TIGRFAM flagellar basal-body rod protein FlgF K02391 - - 0.0000000000000000000000000000000000000000000000000000000000000005612 221.0
YHH3_k127_4615174_3 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.0000000000000000000000000000000000000004771 150.0
YHH3_k127_4623888_0 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005746 559.0
YHH3_k127_4623888_1 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000001058 178.0
YHH3_k127_4623888_2 PFAM YCII-related K09780 - - 0.00000000000000000000000000000000000000000004305 164.0
YHH3_k127_4644801_0 amidohydrolase - - - 1.541e-274 846.0
YHH3_k127_4644801_1 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 561.0
YHH3_k127_4649317_0 chemotaxis sensory transducer K03406 - - 1.342e-269 835.0
YHH3_k127_4649317_1 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 370.0
YHH3_k127_4649317_2 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 364.0
YHH3_k127_4649317_3 - - - - 0.0000001544 53.0
YHH3_k127_4652353_0 - K21449 - - 0.00000000000000009465 89.0
YHH3_k127_465594_0 Belongs to the UPF0061 (SELO) family - - - 5.396e-245 764.0
YHH3_k127_465594_1 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 377.0
YHH3_k127_465594_2 Bacterial inner membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000001281 210.0
YHH3_k127_465594_3 TonB dependent receptor - - - 0.00000000000000000000000002303 109.0
YHH3_k127_465594_4 capsular polysaccharide biosynthesis protein K01104 - 3.1.3.48 0.000000000000001666 79.0
YHH3_k127_465594_5 amino acid aldolase or racemase K01753 - 4.3.1.18 0.000001301 51.0
YHH3_k127_4682343_0 Cyclase dehydrase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001169 269.0
YHH3_k127_4682343_1 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0070930,GO:0071704,GO:0097159,GO:1901363,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007067 258.0
YHH3_k127_4682343_2 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000000009319 66.0
YHH3_k127_4684821_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11745,K11747 - - 9.197e-246 773.0
YHH3_k127_4684821_1 Belongs to the peptidase M16 family K01407 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.24.55 4.295e-201 631.0
YHH3_k127_4684821_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 294.0
YHH3_k127_4689923_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 438.0
YHH3_k127_4689923_1 Domain of unknown function (DUF4115) K15539 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008649 329.0
YHH3_k127_4696364_0 protein related to deoxyribodipyrimidine photolyase K06876 - - 2.309e-246 768.0
YHH3_k127_4696364_1 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005167 406.0
YHH3_k127_4696364_2 Protein of unknown function (DUF2796) - - - 0.00000000000000000000000000000000001424 139.0
YHH3_k127_4696618_0 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA K06169 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 400.0
YHH3_k127_4696618_1 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 349.0
YHH3_k127_4706316_0 Belongs to the DEAD box helicase family - - - 1.955e-233 727.0
YHH3_k127_4706316_1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001035 253.0
YHH3_k127_4706316_2 Acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000005025 224.0
YHH3_k127_4706316_3 - - - - 0.000000000000000000000000000000000000000000001009 168.0
YHH3_k127_4707078_0 Periplasmic Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001299 248.0
YHH3_k127_4707078_1 protein conserved in bacteria K09939 - - 0.00000000000000000000000000000000000000000000000000000000000000002362 226.0
YHH3_k127_4707078_2 ABC-type Co2 transport system, periplasmic component - - - 0.00000000000000000000000000000000000001523 145.0
YHH3_k127_4720318_0 DNA polymerase III K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009782 348.0
YHH3_k127_4720318_1 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005135 246.0
YHH3_k127_4727120_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004325 521.0
YHH3_k127_4727120_1 Thiazole biosynthesis protein ThiH K03150 GO:0003674,GO:0003824,GO:0005488,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016829,GO:0016830,GO:0017144,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0036355,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 490.0
YHH3_k127_4727120_2 phosphomethylpyrimidine kinase K14153 - 2.5.1.3,2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 424.0
YHH3_k127_4727120_3 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 360.0
YHH3_k127_4727120_4 ThiS family K03154 - - 0.0000003626 54.0
YHH3_k127_4730854_0 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 593.0
YHH3_k127_4730854_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 590.0
YHH3_k127_4730854_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007093 291.0
YHH3_k127_4730854_3 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009813 273.0
YHH3_k127_4730854_4 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000517 96.0
YHH3_k127_4743978_0 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 556.0
YHH3_k127_4743978_1 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 379.0
YHH3_k127_4743978_2 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006075 319.0
YHH3_k127_4743978_3 Bacterial-like globin K06886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001523 270.0
YHH3_k127_4757681_0 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 1.091e-236 734.0
YHH3_k127_4766200_0 Belongs to the 5'-nucleotidase family K11751 - 3.1.3.5,3.6.1.45 1.595e-274 856.0
YHH3_k127_4766200_1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001059 252.0
YHH3_k127_4766200_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000004167 195.0
YHH3_k127_4790500_0 PFAM Type II secretion system protein E K02669 - - 3.821e-198 623.0
YHH3_k127_4790500_1 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 376.0
YHH3_k127_4790500_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008671 316.0
YHH3_k127_4801424_0 Two-component sensor kinase CbrA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 608.0
YHH3_k127_4801424_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 490.0
YHH3_k127_4801424_2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 425.0
YHH3_k127_4801535_0 PFAM Mammalian cell entry related K06192 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001189 253.0
YHH3_k127_4801535_1 ABC-type transport auxiliary lipoprotein component K09857 - - 0.000000000000000000000000000000000000000000000000000000000001525 214.0
YHH3_k127_4802540_0 histidine ammonia-lyase K01745 GO:0003674,GO:0003824,GO:0004397,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016840,GO:0016841,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564 4.3.1.3 2.256e-258 801.0
YHH3_k127_4819235_0 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K01761 - 2.5.1.48,4.4.1.11 1.154e-242 752.0
YHH3_k127_4819235_1 Transcriptional regulator of aromatic amino acids metabolism K03721 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006782 598.0
YHH3_k127_4819235_2 Phenylalanine-4-hydroxylase K00500 GO:0003674,GO:0003824,GO:0004497,GO:0004505,GO:0006082,GO:0006520,GO:0006558,GO:0006559,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016491,GO:0016705,GO:0016714,GO:0017144,GO:0019439,GO:0019752,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902221,GO:1902222 1.14.16.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 522.0
YHH3_k127_4819235_3 Domain of unknown function (DUF697) K08990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 464.0
YHH3_k127_4819235_4 YcjX-like family, DUF463 K06918 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 290.0
YHH3_k127_4819235_5 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000000000000000000000000000000000000000000323 237.0
YHH3_k127_4843825_0 Anion-transporting ATPase K01551 - 3.6.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003294 544.0
YHH3_k127_4843825_1 - - - - 0.00000000000000000000000000000000003598 136.0
YHH3_k127_4843825_2 - - - - 0.000000007106 60.0
YHH3_k127_4852487_0 PFAM ComEC Rec2-related protein K02238 - - 0.000000000000000000000000000001166 134.0
YHH3_k127_4852822_0 PFAM malic K00029 - 1.1.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 501.0
YHH3_k127_4852822_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000002192 177.0
YHH3_k127_4852822_2 50S ribosomal protein L31 K02909 - - 0.0000000000000000000000000000000000000000009318 156.0
YHH3_k127_4891052_0 COG0491 Zn-dependent hydrolases, including glyoxylases K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 306.0
YHH3_k127_4891052_1 - - - - 0.000000000000000000000000000009062 120.0
YHH3_k127_4912863_0 Conserved repeat domain - - - 0.0000000000000000000000000000000000000000000000000000000000001301 228.0
YHH3_k127_4912863_1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000004091 84.0
YHH3_k127_4918135_0 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 1.26e-275 850.0
YHH3_k127_4923646_0 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008583 391.0
YHH3_k127_4923646_1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 387.0
YHH3_k127_4923646_3 Protein of unknown function (DUF3833) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006311 319.0
YHH3_k127_4923646_4 Domain of unknown function (DUF4136) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005956 306.0
YHH3_k127_4923646_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000005273 166.0
YHH3_k127_4924845_0 deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002708 408.0
YHH3_k127_4924845_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 288.0
YHH3_k127_4924845_2 LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001474 267.0
YHH3_k127_4924845_4 - - - - 0.00000000000000004902 80.0
YHH3_k127_4924845_5 - - - - 0.0000000000000528 80.0
YHH3_k127_4924845_6 - - - - 0.0000000000001476 73.0
YHH3_k127_4924845_7 Bacterial PH domain - - - 0.000000213 53.0
YHH3_k127_4924845_8 Bacterial PH domain - - - 0.0006817 46.0
YHH3_k127_4924872_0 Membrane - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001651 269.0
YHH3_k127_4924872_1 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000001422 186.0
YHH3_k127_4929425_0 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005105 600.0
YHH3_k127_4937938_0 fatty acid desaturase - - - 2.228e-210 655.0
YHH3_k127_4937938_1 Oxidoreductase FAD-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000188 252.0
YHH3_k127_493857_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 575.0
YHH3_k127_493857_1 COG0331 (acyl-carrier-protein) S-malonyltransferase K00645 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 413.0
YHH3_k127_494033_0 Copper chaperone PCu(A)C K09796 - - 0.00000000000000000000000000000000000000000003583 164.0
YHH3_k127_494033_1 PspC domain - - - 0.0000000000000000000000000002768 114.0
YHH3_k127_494033_2 PFAM Uncharacterised conserved protein UCP029693 - - - 0.00000000000006565 72.0
YHH3_k127_4981956_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 556.0
YHH3_k127_4981956_1 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001877 269.0
YHH3_k127_498728_0 transcriptional K03765 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 430.0
YHH3_k127_5006640_0 Transcriptional - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 320.0
YHH3_k127_5006640_1 MltA-interacting protein MipA K07274 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009858 276.0
YHH3_k127_5006640_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000001546 101.0
YHH3_k127_5006640_3 Histidine kinase K07645 - 2.7.13.3 0.00000000000000006554 82.0
YHH3_k127_5015366_0 CarboxypepD_reg-like domain - - - 5.423e-297 919.0
YHH3_k127_5018365_0 peptidase dimerisation domain - - - 7.573e-264 816.0
YHH3_k127_5018365_1 TAP-like protein - - - 4.514e-215 680.0
YHH3_k127_5018365_2 ABC-2 family transporter protein K09696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004106 572.0
YHH3_k127_5018365_3 ATPases associated with a variety of cellular activities K09697 - 3.6.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 430.0
YHH3_k127_5018365_4 Methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000002912 156.0
YHH3_k127_5018365_5 Methyltransferase - - - 0.00000002891 54.0
YHH3_k127_5022159_0 MORN repeat variant - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 565.0
YHH3_k127_5022159_1 glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.00000000000000000000000000000000000000000000000000000000000000000253 228.0
YHH3_k127_5022962_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 1.83e-275 850.0
YHH3_k127_503499_0 Hydrophobe Amphiphile Efflux-1 (HAE1) K03296,K18138,K18299 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 481.0
YHH3_k127_503499_1 Outer membrane efflux protein - - - 0.000000000000000001767 86.0
YHH3_k127_5038337_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 1.701e-239 743.0
YHH3_k127_5038337_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 4.875e-222 691.0
YHH3_k127_5038337_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 406.0
YHH3_k127_5038337_3 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003527 278.0
YHH3_k127_5038364_0 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 481.0
YHH3_k127_5038364_1 COG2203 FOG GAF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002489 284.0
YHH3_k127_5038364_2 AefR-like transcriptional repressor, C-terminal region K19736 - - 0.000000000000000000000000000000000000000000000000000000000003011 215.0
YHH3_k127_5038364_3 - - - - 0.0000000000000000000000000000000000000000000008384 173.0
YHH3_k127_5038364_4 PepSY-associated TM region - - - 0.0000000000000001804 82.0
YHH3_k127_5038364_6 Protein of unknown function (DUF3325) - - - 0.00000132 56.0
YHH3_k127_5040250_0 PFAM YicC-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003386 560.0
YHH3_k127_5040250_1 C-5 cytosine-specific DNA methylase K00558 - 2.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009068 519.0
YHH3_k127_5040250_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003997 467.0
YHH3_k127_5040250_3 May nick specific sequences that contain T G mispairs resulting from m5C-deamination K07458 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009351 239.0
YHH3_k127_5040250_4 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000009858 175.0
YHH3_k127_5041243_0 phosphate binding protein K02040 - - 1.965e-195 613.0
YHH3_k127_5041243_1 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 515.0
YHH3_k127_5041243_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007974 278.0
YHH3_k127_5041243_3 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000002098 171.0
YHH3_k127_504547_0 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03892 - - 0.000000000000000000000000000000000000000000000000000000000000002083 224.0
YHH3_k127_504547_1 chemotaxis, protein K03406 - - 0.0000000000000000000000000000000000000000001822 162.0
YHH3_k127_50621_0 PFAM Glutamine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 492.0
YHH3_k127_50621_1 acyl-CoA dehydrogenase K06445 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006153 405.0
YHH3_k127_50621_2 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 320.0
YHH3_k127_50621_3 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000009145 215.0
YHH3_k127_5063641_0 mechanosensitive ion channel K05802 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 580.0
YHH3_k127_5063641_1 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 539.0
YHH3_k127_5070241_0 Beta-ketoacyl synthase, C-terminal domain K00647 - 2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 346.0
YHH3_k127_5070241_1 COG0842 ABC-type multidrug transport system, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000458 346.0
YHH3_k127_5070241_2 COG1131 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 312.0
YHH3_k127_5070241_3 Domain of unknown function (DUF4872) - - - 0.00000000000000000000000000000000000000000000000000000000009715 208.0
YHH3_k127_5070241_4 - - - - 0.00000000000000000000000000000000000007917 149.0
YHH3_k127_5070241_5 Transglycosylase associated protein - - - 0.00000000000000000000000000000000000149 139.0
YHH3_k127_5070241_6 Acyl carrier protein K02078 - - 0.0000000000000000000000001641 108.0
YHH3_k127_5070241_7 - - - - 0.000000000000000000000002993 107.0
YHH3_k127_5070241_8 lysine biosynthetic process via aminoadipic acid K00997,K06133 - 2.7.8.7 0.00000122 57.0
YHH3_k127_5072073_0 TIGRFAM Diguanylate cyclase - - - 0.0 1024.0
YHH3_k127_5073065_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 477.0
YHH3_k127_5073065_1 Efflux transporter, RND family, MFP subunit K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 370.0
YHH3_k127_5078154_0 TIGRFAM Threonine synthase K01733 - 4.2.3.1 3.181e-249 772.0
YHH3_k127_5078154_1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006629 396.0
YHH3_k127_5078154_2 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004413,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006566,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009088,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.1.39 0.000000000000007921 74.0
YHH3_k127_5103978_0 Sel1-like repeats. K07126 - - 2.156e-306 953.0
YHH3_k127_5103978_1 PFAM Three-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 1.707e-288 900.0
YHH3_k127_5103978_2 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 462.0
YHH3_k127_5103978_3 COG1404 Subtilisin-like serine proteases K14645 GO:0005575,GO:0005576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 372.0
YHH3_k127_510740_0 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.0000000000000000000000000000000000000000002579 166.0
YHH3_k127_510740_1 Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation K06140 - - 0.00000000000000000000000000000000000000009613 154.0
YHH3_k127_510740_2 Glutathione S-transferase, N-terminal domain - - - 0.000000000001504 68.0
YHH3_k127_510740_3 Transcription elongation factor K06140 - - 0.000000002892 63.0
YHH3_k127_5113392_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 1.084e-251 782.0
YHH3_k127_5113392_1 MltA-interacting protein MipA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008575 526.0
YHH3_k127_5113392_2 Oxidoreductase NAD-binding domain K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 406.0
YHH3_k127_5113392_3 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides K07232 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008728 383.0
YHH3_k127_5145687_0 COG0542 ATPases with chaperone activity, ATP-binding subunit K11907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 408.0
YHH3_k127_5145687_1 Type VI secretion, TssG K11895 - - 0.00000000000000000000000003717 114.0
YHH3_k127_5162329_0 Isocitrate isopropylmalate dehydrogenase K00030,K07246 - 1.1.1.41,1.1.1.83,1.1.1.93,4.1.1.73 2.392e-207 646.0
YHH3_k127_5162329_1 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008973,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 488.0
YHH3_k127_5162329_2 Phosphorylase superfamily K03784 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005843 445.0
YHH3_k127_5162329_3 CMP dCMP deaminase, zinc-binding K01487 - 3.5.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 338.0
YHH3_k127_5162329_4 Acts on guanine, xanthine and to a lesser extent hypoxanthine K00769 GO:0000310,GO:0003674,GO:0003824,GO:0004422,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006166,GO:0006177,GO:0006188,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032261,GO:0032263,GO:0032264,GO:0032265,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0043094,GO:0043101,GO:0043173,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046040,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097292,GO:0097293,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 297.0
YHH3_k127_5162329_5 conserved protein - GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000005972 137.0
YHH3_k127_5189038_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1326.0
YHH3_k127_5189038_1 COG0823 Periplasmic component of the Tol biopolymer transport system - - - 0.0 1302.0
YHH3_k127_5189038_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage - - - 1.014e-216 674.0
YHH3_k127_5189038_3 Belongs to the CinA family K03743 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004164 280.0
YHH3_k127_5194592_0 Cobalamin synthesis protein cobW C-terminal domain - - - 1.431e-231 719.0
YHH3_k127_5196017_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07287 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009986,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0042802,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045229,GO:0061024,GO:0071709,GO:0071840,GO:0071944,GO:0098552,GO:0098796,GO:1990063 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008494 470.0
YHH3_k127_5196017_1 Uncharacterized protein conserved in bacteria (DUF2066) K09938 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002132 245.0
YHH3_k127_5196017_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000003007 177.0
YHH3_k127_5206602_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1152.0
YHH3_k127_5206602_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004238 392.0
YHH3_k127_5212358_0 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.0 1187.0
YHH3_k127_5212358_1 associated with various cellular activities K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000051 510.0
YHH3_k127_5222811_0 Acts as a magnesium transporter K06213 - - 5.155e-251 778.0
YHH3_k127_5222811_1 Outer membrane protein protective antigen OMA87 - - - 0.0000000000000000000000000000000000000000000000000005472 188.0
YHH3_k127_5252363_0 Chemotaxis sensory transducer K03776 - - 1.115e-206 648.0
YHH3_k127_5288223_0 TonB dependent receptor K16088 - - 7.785e-263 820.0
YHH3_k127_5300063_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 7.145e-272 857.0
YHH3_k127_5300063_1 Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs K06219 GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097697,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006526 400.0
YHH3_k127_5300063_2 NGG1p interacting factor 3 - - - 0.000000000000000000000000000000008352 127.0
YHH3_k127_5319076_0 Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair K03580 - - 2.759e-288 890.0
YHH3_k127_5319076_1 SMART Nucleotide binding protein, PINc K07175 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003943 451.0
YHH3_k127_5320284_0 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 2.811e-202 632.0
YHH3_k127_5320284_1 exporters of the RND superfamily K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 389.0
YHH3_k127_5320284_2 exporters of the RND superfamily K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006161 290.0
YHH3_k127_5320284_3 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006346 241.0
YHH3_k127_5320284_4 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000003427 241.0
YHH3_k127_5320284_5 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000002601 232.0
YHH3_k127_5325058_0 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.0 1697.0
YHH3_k127_5325058_1 Y_Y_Y domain - - - 0.0 1467.0
YHH3_k127_5325058_2 Ammonium transporter K03320 - - 1.594e-253 784.0
YHH3_k127_5325058_3 Transcriptional regulator K15835 GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 473.0
YHH3_k127_5325058_4 peptidase, M13 K01415,K07386 - 3.4.24.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 434.0
YHH3_k127_5325058_5 Belongs to the P(II) protein family K04752 - - 0.00000000000000000000000000000000000000000000000000000000000000001495 224.0
YHH3_k127_5325058_6 Uncharacterised protein family (UPF0231) K09910 - - 0.00000000000000000000000000000000000000000000000000000000001049 209.0
YHH3_k127_5333066_0 Response regulator of the LytR AlgR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 516.0
YHH3_k127_5333066_1 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009645 494.0
YHH3_k127_533430_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000469 481.0
YHH3_k127_533430_1 BadF BadG BcrA BcrD type K18676 - 2.7.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 384.0
YHH3_k127_5334551_0 Asparaginyl-tRNA synthetase K01893 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 1.138e-261 811.0
YHH3_k127_5334551_1 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 374.0
YHH3_k127_5334551_2 - - - - 0.000000000000000000000000000000000000000000000000000000000002702 210.0
YHH3_k127_5355407_0 Sel1-like repeats. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005729 370.0
YHH3_k127_5355407_1 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 325.0
YHH3_k127_5355407_2 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00000000000004131 74.0
YHH3_k127_5357586_0 Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA K00564,K11391 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052916,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.172,2.1.1.174 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 604.0
YHH3_k127_5357586_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005049 314.0
YHH3_k127_5357586_2 Lipoprotein K07286 - - 0.00000000000000000000000000000000000000000000000000000000000000001366 229.0
YHH3_k127_5357586_3 - - - - 0.00000000000000000000000000000000000000000000000000001178 191.0
YHH3_k127_5357586_4 PFAM Major Facilitator Superfamily K08218 - - 0.0000000000000000000000000000000000000114 147.0
YHH3_k127_5357586_5 2OG-Fe(II) oxygenase superfamily - - - 0.0000000000000000000000008377 106.0
YHH3_k127_5368702_0 Biotin-lipoyl like K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007028 420.0
YHH3_k127_5368702_1 COG0841 Cation multidrug efflux pump K03296,K18138 - - 0.0000000000000001336 79.0
YHH3_k127_539929_0 membrane carboxypeptidase (Penicillin-binding protein) - - - 8.616e-242 763.0
YHH3_k127_539929_1 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 0.00000000000002992 72.0
YHH3_k127_5403261_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 3.384e-253 786.0
YHH3_k127_5403261_1 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000002134 162.0
YHH3_k127_5407501_0 protein conserved in bacteria K09919 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 468.0
YHH3_k127_5407501_1 Protein of unknown function (DUF938) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 293.0
YHH3_k127_5435312_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 1.209e-295 915.0
YHH3_k127_5435312_1 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 3.955e-197 616.0
YHH3_k127_5435312_2 Responsible for synthesis of pseudouridine from uracil K06177 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 371.0
YHH3_k127_5435312_3 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 356.0
YHH3_k127_5435312_4 Enoyl-CoA hydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 342.0
YHH3_k127_5435312_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000005098 216.0
YHH3_k127_5435312_6 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000008665 185.0
YHH3_k127_5435312_7 AAA domain (dynein-related subfamily) - - - 0.0000000000000000000000000000000000000001528 150.0
YHH3_k127_5446651_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 1.237e-227 710.0
YHH3_k127_5446651_1 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007749 246.0
YHH3_k127_5452817_0 COG2273 Beta-glucanase Beta-glucan synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 398.0
YHH3_k127_5452817_1 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004659 276.0
YHH3_k127_545871_0 Glyco_18 - - - 0.0 1701.0
YHH3_k127_545871_1 protein conserved in bacteria K03933,K21712 - - 9.66e-240 746.0
YHH3_k127_5476438_0 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000081 276.0
YHH3_k127_5476438_1 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002426 263.0
YHH3_k127_5476438_2 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000001522 179.0
YHH3_k127_5476438_3 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000009308 171.0
YHH3_k127_5478820_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000054 603.0
YHH3_k127_5478820_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0000000000000000000000000002464 114.0
YHH3_k127_5482174_0 5-carboxymethyl-2-hydroxymuconate isomerase K01826 - 5.3.3.10 0.0000000000000000000000000000000000000000000000000000000018 202.0
YHH3_k127_5482174_1 Belongs to the glycosyl hydrolase 2 family K05970 - 3.1.1.53 0.00000000000000000000000000000000000000000000000002625 183.0
YHH3_k127_551680_0 PA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 312.0
YHH3_k127_551680_1 Esterase PHB depolymerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002944 261.0
YHH3_k127_5538078_0 Signal transducing histidine kinase, homodimeric K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 485.0
YHH3_k127_5538078_1 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) K03414 - - 0.000000000000000000000000000000000000000002396 156.0
YHH3_k127_554846_0 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 4.835e-209 655.0
YHH3_k127_554846_1 membrane carboxypeptidase (Penicillin-binding protein) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 331.0
YHH3_k127_5553724_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0 1098.0
YHH3_k127_5553724_1 PFAM Uncharacterised protein family (UPF0227) K07000 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 309.0
YHH3_k127_5553724_2 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 GO:0003674,GO:0003824,GO:0004112,GO:0004114,GO:0004115,GO:0005488,GO:0005506,GO:0008081,GO:0008150,GO:0008198,GO:0009987,GO:0016043,GO:0016787,GO:0016788,GO:0042545,GO:0042578,GO:0043167,GO:0043169,GO:0045229,GO:0046872,GO:0046914,GO:0071554,GO:0071555,GO:0071840 3.1.4.53 0.00000000000000000000000000002164 118.0
YHH3_k127_5555536_0 AraC family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 357.0
YHH3_k127_5555536_1 (GGDEF) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006088 317.0
YHH3_k127_5618250_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004018 351.0
YHH3_k127_5618250_1 Nucleotidyltransferase substrate binding protein like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006396 253.0
YHH3_k127_5618250_2 Histidine phosphatase superfamily (branch 1) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001302 249.0
YHH3_k127_5618250_3 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000001657 198.0
YHH3_k127_5618250_4 Nucleotidyltransferase domain K07076 - - 0.0000000000000000000000000000000000000000001345 160.0
YHH3_k127_5630613_0 TIGRFAM RHS repeat-associated core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006083 317.0
YHH3_k127_5634780_0 PFAM aminotransferase class I and II, regulatory protein GntR HTH - - - 0.00000000000000000000000000000000000000000000000000000005812 200.0
YHH3_k127_5634780_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000001535 196.0
YHH3_k127_5634780_2 aminopeptidase N - - - 0.00000000000000000000000000000000005546 136.0
YHH3_k127_5634780_3 Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions K02553 - - 0.00001098 48.0
YHH3_k127_5637607_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 480.0
YHH3_k127_5637607_1 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009348 249.0
YHH3_k127_5637607_2 Belongs to the HesB IscA family K05997,K13628 - - 0.000000000000000000000000000000000000000002122 156.0
YHH3_k127_5647702_0 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 481.0
YHH3_k127_564781_0 GGDEF domain - - - 2.347e-210 670.0
YHH3_k127_564781_1 Pyridoxal-phosphate dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 417.0
YHH3_k127_564781_2 Pilus assembly protein - - - 0.000000000000000000000000000000000000000000882 162.0
YHH3_k127_5649914_0 Isocitrate dehydrogenase NADP-dependent, monomeric type K00031 - 1.1.1.42 1.662e-196 617.0
YHH3_k127_5650508_0 Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair K03580 - - 2.524e-231 722.0
YHH3_k127_5650508_1 Responsible for synthesis of pseudouridine from uracil K06177 - 5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 372.0
YHH3_k127_5650508_2 OmpA family - - - 0.00000000000000000000000000000000000000009142 153.0
YHH3_k127_5650738_0 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K18800 - - 1.712e-199 628.0
YHH3_k127_5650738_1 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 542.0
YHH3_k127_5650738_2 Belongs to the UPF0149 family K09895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 330.0
YHH3_k127_5650738_3 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000001085 89.0
YHH3_k127_5659670_0 acyl-CoA dehydrogenase - - - 0.0 1120.0
YHH3_k127_5659670_1 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 383.0
YHH3_k127_5687421_0 penicillin amidase K01434 - 3.5.1.11 4.177e-232 724.0
YHH3_k127_5687421_1 PFAM Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 475.0
YHH3_k127_5705240_0 PFAM C4-dicarboxylate anaerobic - - - 1.985e-266 823.0
YHH3_k127_5705240_1 Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation K01305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 503.0
YHH3_k127_5713757_0 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 298.0
YHH3_k127_5713757_1 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000001203 230.0
YHH3_k127_5713757_2 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000003231 196.0
YHH3_k127_5718710_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007973 462.0
YHH3_k127_5721692_0 of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004715 483.0
YHH3_k127_5721692_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 424.0
YHH3_k127_5721692_2 COG0840 Methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000647 304.0
YHH3_k127_5724611_0 Polysaccharide biosynthesis protein K03328 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005767 355.0
YHH3_k127_5731293_0 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 3.713e-226 704.0
YHH3_k127_5731293_1 PFAM Endonuclease Exonuclease phosphatase K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 511.0
YHH3_k127_5731293_2 D-alanyl-D-alanine carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 290.0
YHH3_k127_5731293_3 Nucleoid-associated protein K06899 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003727,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0009295,GO:0042802,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044424,GO:0044464,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000003256 244.0
YHH3_k127_5731293_4 UPF0208 membrane protein K09899 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0010639,GO:0016020,GO:0033043,GO:0033044,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0065007,GO:0071944,GO:2001251 - 0.000000000000000000000000000000000000000000000000000000000000005507 220.0
YHH3_k127_5731293_5 Belongs to the ArsC family - - - 0.000000000000000000000000000000000000000000000000000008366 190.0
YHH3_k127_5733425_0 Role in flagellar biosynthesis K02421 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 483.0
YHH3_k127_5733425_1 Plays a role in the flagellum-specific transport system K02419 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004974 423.0
YHH3_k127_5733425_2 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 301.0
YHH3_k127_5733425_3 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003269 241.0
YHH3_k127_5733425_4 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.00000000000000000000000000000000000000000000000000000000002633 207.0
YHH3_k127_5733425_5 flagellar K02418 - - 0.00000000000000000000000000000000000000000000000000002361 193.0
YHH3_k127_5733425_6 Role in flagellar biosynthesis K02420 - - 0.0000000000000000000000000000000000000000001166 160.0
YHH3_k127_5754904_0 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 4.798e-216 673.0
YHH3_k127_5754904_1 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 416.0
YHH3_k127_5754904_2 Sodium hydrogen exchanger K11105 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 282.0
YHH3_k127_5771421_0 Prolyl oligopeptidase K01322 - 3.4.21.26 0.0 1143.0
YHH3_k127_5771421_1 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008973,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 326.0
YHH3_k127_5787912_0 BadF BadG BcrA BcrD K18676 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0047931 2.7.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 505.0
YHH3_k127_5787912_1 SIS domain - - - 0.00000000000000000000000000000000000000005956 152.0
YHH3_k127_5793911_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 4.767e-239 742.0
YHH3_k127_5814703_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.622e-292 900.0
YHH3_k127_5814703_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000002712 206.0
YHH3_k127_5819650_0 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004218 333.0
YHH3_k127_5819650_1 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.0000000000000000000000000000000000000000000000000003847 192.0
YHH3_k127_5854020_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1011.0
YHH3_k127_5854020_1 TonB dependent receptor - - - 0.00000000000000000000000000000000000001729 144.0
YHH3_k127_5854020_2 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.0000000000000000000000000000005975 122.0
YHH3_k127_5854020_3 - - - - 0.000001438 50.0
YHH3_k127_5854020_4 - - - - 0.000009161 49.0
YHH3_k127_586138_0 Bacterial protein of unknown function (DUF885) - - - 7.973e-229 714.0
YHH3_k127_586138_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 466.0
YHH3_k127_586138_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 327.0
YHH3_k127_5868637_0 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats - - - 2.665e-261 818.0
YHH3_k127_5868637_1 Allophanate hydrolase subunit 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 524.0
YHH3_k127_5868637_2 Reduces the stability of FtsZ polymers in the presence of ATP K06916 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 459.0
YHH3_k127_5868637_3 LamB/YcsF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 424.0
YHH3_k127_5868637_4 Allophanate hydrolase subunit 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 399.0
YHH3_k127_5868637_5 LysR family K03576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001369 270.0
YHH3_k127_5868637_6 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001071 258.0
YHH3_k127_5868637_7 Domain of unknown function (DUF4392) - - - 0.000000000000000000000000000000000000000000000000001869 183.0
YHH3_k127_5869961_0 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 501.0
YHH3_k127_5869961_1 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000002557 233.0
YHH3_k127_5882040_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 9.07e-226 702.0
YHH3_k127_5882040_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007195 566.0
YHH3_k127_5900080_0 PFAM peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 3.435e-304 944.0
YHH3_k127_5900080_1 Na+/H+ antiporter family K03315 - - 0.00000000000000000001635 91.0
YHH3_k127_5902160_0 Belongs to the aspartokinase family K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009085,GO:0009089,GO:0009090,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.4 5.714e-263 813.0
YHH3_k127_5902160_1 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008006 430.0
YHH3_k127_5902160_2 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000506 425.0
YHH3_k127_5902160_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 360.0
YHH3_k127_5902160_4 to the N-terminal domain of Lon protease' K07157 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001321 262.0
YHH3_k127_5902160_5 Peptidase m28 - - - 0.0000000000000000000000000000000000000000000000000000000000001844 214.0
YHH3_k127_5902160_6 - - - - 0.0000000000000000000000000000000000000000000000000000001496 197.0
YHH3_k127_5902408_0 TIGRFAM Flagellar hook-associated protein 3 K02397 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 468.0
YHH3_k127_5902408_1 TIGRFAM Flagellar hook-associated protein, FlgK K02396 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007537 448.0
YHH3_k127_5902408_2 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.000000000000000004361 85.0
YHH3_k127_5903460_0 Signal transduction histidine kinase - - - 2.659e-238 749.0
YHH3_k127_5903460_1 Major facilitator superfamily - - - 0.000000000002437 67.0
YHH3_k127_5908155_0 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008679 550.0
YHH3_k127_5908155_1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004754 306.0
YHH3_k127_5908155_2 COG0438 Glycosyltransferase K00754 - - 0.0000000000000000542 81.0
YHH3_k127_590845_0 Oxidoreductase FAD-binding domain - - - 0.000000000000000000000000000000000000000000000003723 186.0
YHH3_k127_5928451_0 PFAM methyltransferase small - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 514.0
YHH3_k127_5928451_1 Protein of unknown function (DUF3293) - - - 0.000000000000000000000000000000000000008136 145.0
YHH3_k127_5928816_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 1.57e-289 891.0
YHH3_k127_5928816_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 1.092e-224 698.0
YHH3_k127_5928816_2 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004428 442.0
YHH3_k127_5928816_3 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.0000000000000000000000000000000000000000000000000000000000000000001758 231.0
YHH3_k127_5928816_4 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000000001064 80.0
YHH3_k127_5947621_0 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 542.0
YHH3_k127_5947621_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 534.0
YHH3_k127_5947621_2 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005929 351.0
YHH3_k127_5947621_3 Hydrolyzes dipeptides containing N-terminal aspartate residues. May play a role in allowing the cell to use peptide aspartate to spare carbon otherwise required for the synthesis of the aspartate family of amino acids K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002295 331.0
YHH3_k127_5947621_4 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004141,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017076,GO:0017144,GO:0018130,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000668 261.0
YHH3_k127_5947621_5 PFAM PhnA protein K06193 - - 0.0000000000000000000000000000000000000000000000000000000000008151 211.0
YHH3_k127_5947621_6 Eukaryotic aspartyl protease - - - 0.00000000000000002456 81.0
YHH3_k127_5948733_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1293.0
YHH3_k127_5948733_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 2.191e-242 750.0
YHH3_k127_5948733_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K03472 - 1.2.1.72 1.076e-196 615.0
YHH3_k127_5948733_3 Belongs to the phosphoglycerate kinase family K00927 GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 389.0
YHH3_k127_5948733_4 transporter K12942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007994 250.0
YHH3_k127_5965830_0 Glycosyltransferase 36 associated - - - 0.0 1530.0
YHH3_k127_5965830_1 COG2211 Na melibiose symporter and related transporters K03292 - - 8.355e-234 730.0
YHH3_k127_5965830_2 Oxidoreductase - - - 0.000000000000000000000000003707 113.0
YHH3_k127_5972201_0 High frequency lysogenization protein HflD homolog K07153 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 329.0
YHH3_k127_5972201_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000003163 225.0
YHH3_k127_5972201_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000001197 186.0
YHH3_k127_5973564_0 cyclic-guanylate-specific phosphodiesterase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 616.0
YHH3_k127_5973564_1 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 577.0
YHH3_k127_5973564_2 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006132 300.0
YHH3_k127_5973564_3 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000227 243.0
YHH3_k127_5973564_4 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000000000000000000000006707 152.0
YHH3_k127_598352_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.0 1084.0
YHH3_k127_598352_1 PFAM Kelch - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000483 520.0
YHH3_k127_598352_2 PFAM Uncharacterised protein family UPF0066 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007321 447.0
YHH3_k127_598352_3 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003882 265.0
YHH3_k127_598352_4 Belongs to the RelE toxin family K19092 - - 0.0000000007944 60.0
YHH3_k127_598352_5 PFAM Kelch - - - 0.0000114 47.0
YHH3_k127_598469_0 Patatin-like phospholipase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001722 245.0
YHH3_k127_598469_1 WYL domain - - - 0.0000000000000000000000000000000000000000000000000000000528 200.0
YHH3_k127_5996900_0 ABC transporter - - - 0.0 1009.0
YHH3_k127_5996900_1 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.00000001411 56.0
YHH3_k127_6013832_0 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 2.176e-243 752.0
YHH3_k127_6041991_0 PFAM Histone deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 550.0
YHH3_k127_6041991_1 Peptidoglycan-binding domain 1 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 322.0
YHH3_k127_6041991_2 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000001891 236.0
YHH3_k127_6041991_3 Acetyl-CoA hydrolase/transferase N-terminal domain - - - 0.00000000000000000000000000000000000000000001845 162.0
YHH3_k127_6041991_4 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000003252 113.0
YHH3_k127_6048562_0 Serine carboxypeptidase - - - 4.79e-318 975.0
YHH3_k127_6058181_0 hydrolase, family 1 K05350 - 3.2.1.21 1.564e-252 784.0
YHH3_k127_6058181_1 transporter K02429 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004116 378.0
YHH3_k127_6058181_2 MFS/sugar transport protein - - - 0.000000000000000000000000000000000000000000000000000000000008578 208.0
YHH3_k127_606120_0 protein and some similarities with VgrG protein - - - 5.041e-205 654.0
YHH3_k127_606120_1 type VI secretion protein - - - 0.0000000000000000000000000000000000000000000000000345 179.0
YHH3_k127_606120_2 Gene 25-like lysozyme K06903 - - 0.000000000000000000000000000000000000002961 150.0
YHH3_k127_606120_3 protein of Photorhabdus and some similarities with - - - 0.00000000001366 74.0
YHH3_k127_6102209_0 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 293.0
YHH3_k127_6102209_1 AraC-type transcriptional regulator N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007696 293.0
YHH3_k127_6171755_0 Capsule assembly protein Wzi - - - 5.234e-242 752.0
YHH3_k127_6171755_1 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002729 393.0
YHH3_k127_6171755_2 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009357 308.0
YHH3_k127_6171755_3 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 291.0
YHH3_k127_6195027_0 Glycosyl hydrolases family 8 K15531 - 3.2.1.156 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 456.0
YHH3_k127_6195027_1 MFS/sugar transport protein - - - 0.0000000004352 61.0
YHH3_k127_6205463_0 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 457.0
YHH3_k127_6205463_1 other phosphorylase family 1 K01243 - 3.2.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 398.0
YHH3_k127_6205463_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 334.0
YHH3_k127_6205463_3 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000003037 214.0
YHH3_k127_6205463_4 AlkA N-terminal domain K13529 - 3.2.2.21 0.000000000000000000000000000003668 119.0
YHH3_k127_62175_0 Citrate transporter - - - 0.0 1304.0
YHH3_k127_62175_1 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 325.0
YHH3_k127_62175_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000001778 172.0
YHH3_k127_6234069_0 SAM-dependent methyltransferase K06969 - 2.1.1.191 1.652e-231 720.0
YHH3_k127_6234069_1 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003467 241.0
YHH3_k127_6234069_2 YceI-like domain - - - 0.0000000000000000000000000000000000000000005209 164.0
YHH3_k127_6237332_0 Prolyl oligopeptidase family - - - 4.72e-300 933.0
YHH3_k127_6237332_1 helix_turn_helix, arabinose operon control protein K19694 - - 0.000000004148 57.0
YHH3_k127_6240778_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 8.809e-231 722.0
YHH3_k127_6241109_0 Belongs to the ALAD family K01698 - 4.2.1.24 1.172e-203 635.0
YHH3_k127_6241109_1 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 5.557e-203 634.0
YHH3_k127_6241109_2 diguanylate cyclase - - - 0.000000000000000000000000000000000000000001865 160.0
YHH3_k127_624479_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K16872 - 2.3.1.207 1.249e-204 641.0
YHH3_k127_624479_1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) - - - 0.000000000000000000006363 91.0
YHH3_k127_6246963_0 Zinc carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006647 505.0
YHH3_k127_6246963_1 PFAM Na H antiporter - - - 0.000000000000000000000000000004882 119.0
YHH3_k127_6283739_0 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 6.557e-263 813.0
YHH3_k127_6283739_1 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 2.233e-200 625.0
YHH3_k127_6283739_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 358.0
YHH3_k127_6283739_3 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000005987 158.0
YHH3_k127_6292053_0 PFAM Alpha-2-macroglobulin K06894 - - 1.253e-263 816.0
YHH3_k127_6326208_0 Phosphatase K07093 - - 0.0 1053.0
YHH3_k127_6326208_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004711 466.0
YHH3_k127_6335024_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1291.0
YHH3_k127_6335024_1 SH3 domain K07184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 319.0
YHH3_k127_6335024_2 helix_turn_helix ASNC type - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 306.0
YHH3_k127_6335024_3 CYTH - - - 0.0000000000000000000000000000000000000000000000000000000000001068 215.0
YHH3_k127_6335024_4 CYTH - - - 0.00000000000000000000001742 100.0
YHH3_k127_6388596_0 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 449.0
YHH3_k127_6400381_0 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 495.0
YHH3_k127_6400381_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005749 450.0
YHH3_k127_6407208_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 4.164e-267 826.0
YHH3_k127_6414651_0 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000005038 220.0
YHH3_k127_6414651_1 TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000001525 222.0
YHH3_k127_6418161_0 transporter antisigma-factor antagonist STAS K03321 - - 3.362e-287 885.0
YHH3_k127_6418161_1 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 507.0
YHH3_k127_6418161_2 PFAM Citrate transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 364.0
YHH3_k127_6418161_3 peptidyl-tyrosine sulfation K00525,K01768 - 1.17.4.1,4.6.1.1 0.0000000000000000000000000000000000000000000000002092 176.0
YHH3_k127_6430917_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 589.0
YHH3_k127_6430917_1 Glycosyl transferase, family 2 - - - 0.00000000000000000000000004761 107.0
YHH3_k127_6462158_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0 1129.0
YHH3_k127_6462158_1 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 299.0
YHH3_k127_6462158_2 Sporulation related domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007757 284.0
YHH3_k127_647786_0 Bacterial protein of unknown function (DUF885) - - - 1.174e-233 726.0
YHH3_k127_6495160_0 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 602.0
YHH3_k127_6495160_1 - - - - 0.000000000000000000000000000000001059 136.0
YHH3_k127_650631_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009641 482.0
YHH3_k127_650631_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000002882 164.0
YHH3_k127_6526056_0 aminotransferase class I and II K00375 - - 5.744e-224 702.0
YHH3_k127_6526056_1 Asparaginase K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 447.0
YHH3_k127_6526056_2 Putative FMN-binding domain K07734 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008317 293.0
YHH3_k127_6526056_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003898 238.0
YHH3_k127_6526056_4 Lipase (class 3) - - - 0.00000000000000000000000000000000000000000000000000000000000000003319 224.0
YHH3_k127_6526056_5 PFAM ATPase, BadF BadG BcrA BcrD type K18676 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0047931 2.7.1.8 0.000000000000000000000000000000000000000000000000000000001857 211.0
YHH3_k127_6526056_6 - - - - 0.000000000000000000000000000000000000000000000000000003589 196.0
YHH3_k127_6526056_7 Participates in the control of copper homeostasis K06201 GO:0006873,GO:0006875,GO:0006878,GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0019725,GO:0030003,GO:0042221,GO:0042592,GO:0046688,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0055065,GO:0055070,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0098771 - 0.00000000000000000000000000000000000000002265 163.0
YHH3_k127_6526056_8 F5/8 type C domain - - - 0.00000000000000000000000003248 109.0
YHH3_k127_6528019_0 cellulose 1,4-beta-cellobiosidase activity - - - 0.0000000000000000000000000000006636 127.0
YHH3_k127_6528019_1 - - - - 0.000000003085 63.0
YHH3_k127_653410_0 non-ribosomal peptide synthetase K16416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 392.0
YHH3_k127_6539645_0 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 600.0
YHH3_k127_6539645_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009612 323.0
YHH3_k127_6554273_0 alpha beta alpha domain I K01835 - 5.4.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 391.0
YHH3_k127_6554273_1 Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated K03645 GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006275,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008150,GO:0008156,GO:0009314,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010385,GO:0010556,GO:0010558,GO:0010605,GO:0016043,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032991,GO:0032993,GO:0042802,GO:0043565,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044729,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0060255,GO:0065003,GO:0065007,GO:0071840,GO:0080090,GO:0090143,GO:0090329,GO:0097159,GO:0098813,GO:1901363,GO:1990097,GO:1990837,GO:2000104,GO:2000112,GO:2000113 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 287.0
YHH3_k127_6554273_2 Alpha beta hydrolase K01175 - - 0.0000000000000000000000000000000000000000000000000000000008626 203.0
YHH3_k127_656021_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1331.0
YHH3_k127_656021_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 302.0
YHH3_k127_656021_2 May be involved in cell division K05803 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009987,GO:0016020,GO:0030674,GO:0044464,GO:0051301,GO:0060090,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001008 283.0
YHH3_k127_656021_3 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000000000000000000000006688 171.0
YHH3_k127_6573587_0 Oligopeptidase K01354 - 3.4.21.83 5.607e-290 893.0
YHH3_k127_6575938_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1005.0
YHH3_k127_6575938_1 PFAM Metal-dependent phosphohydrolase, HD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 556.0
YHH3_k127_6575938_2 PFAM Metal-dependent phosphohydrolase, HD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 532.0
YHH3_k127_6575938_3 Type II secretion system protein B K02451 - - 0.0000000000000000000000000000000000000000000000000000000000000000009089 236.0
YHH3_k127_6575938_4 Type II secretory pathway component ExeA K02450 - - 0.0000000000000000287 81.0
YHH3_k127_657900_0 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009691 447.0
YHH3_k127_657900_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008933 385.0
YHH3_k127_6591373_0 synthase III K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006092 508.0
YHH3_k127_6591373_1 Iron-containing redox enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 348.0
YHH3_k127_6591373_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 302.0
YHH3_k127_66091_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 8.335e-274 845.0
YHH3_k127_66091_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 285.0
YHH3_k127_66091_2 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000005879 177.0
YHH3_k127_66091_3 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.00000000000000000002656 90.0
YHH3_k127_661451_0 TIGRFAM ATP-dependent helicase HrpA K03578 - 3.6.4.13 0.0 1352.0
YHH3_k127_661451_1 PilZ domain - - - 0.000000000000000000000000001395 112.0
YHH3_k127_6657026_0 response regulator K07712 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 514.0
YHH3_k127_6657026_1 signal transduction histidine kinase K07708 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 423.0
YHH3_k127_6668415_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 1.586e-267 826.0
YHH3_k127_6668415_1 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 454.0
YHH3_k127_6668415_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 429.0
YHH3_k127_6668415_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 392.0
YHH3_k127_6668415_4 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003701 260.0
YHH3_k127_6668415_5 PFAM Preprotein translocase SecG subunit K03075 - - 0.00000000000000000000000000000000000000000000000000002693 191.0
YHH3_k127_6668415_6 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000004208 170.0
YHH3_k127_6668415_7 - - - - 0.00000000002032 64.0
YHH3_k127_6668415_8 - - - - 0.0000747 47.0
YHH3_k127_6715932_0 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 7.3e-313 964.0
YHH3_k127_6715932_1 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002374 267.0
YHH3_k127_6775703_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 572.0
YHH3_k127_6775703_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003242 313.0
YHH3_k127_6777612_0 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000798 462.0
YHH3_k127_6777612_1 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002452 247.0
YHH3_k127_6779269_0 Belongs to the GPAT DAPAT family K00631 GO:0003674,GO:0003824,GO:0004366,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006629,GO:0006631,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0019752,GO:0031224,GO:0031226,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.3.1.15 0.0 1397.0
YHH3_k127_6779269_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 3.633e-220 685.0
YHH3_k127_6779269_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006769 524.0
YHH3_k127_6779269_3 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006586 386.0
YHH3_k127_6779911_0 Double sensory domain of two-component sensor kinase - - - 4.357e-205 648.0
YHH3_k127_6779911_1 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 496.0
YHH3_k127_6789097_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 391.0
YHH3_k127_6789097_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009782 348.0
YHH3_k127_6789097_2 Uracil DNA glycosylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009824 287.0
YHH3_k127_6789097_3 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005241 237.0
YHH3_k127_6789097_4 Thioredoxin - - - 0.0000000000000000000000000000000000000006868 155.0
YHH3_k127_6789097_5 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.000000000000000000000000000000000000271 143.0
YHH3_k127_6789097_6 - - - - 0.000000000000359 71.0
YHH3_k127_6789097_7 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000001674 49.0
YHH3_k127_6816189_0 May be involved in recombination K03554 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 527.0
YHH3_k127_6816189_1 signal transduction protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007421 431.0
YHH3_k127_6816189_2 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 381.0
YHH3_k127_6816189_3 Histidine Phosphotransfer domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 380.0
YHH3_k127_6831500_0 Pirin K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009536 353.0
YHH3_k127_6831500_1 PFAM Periplasmic binding protein LacI transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008898 349.0
YHH3_k127_6831500_2 lipoprotein NlpE involved in copper resistance K06079 - - 0.00000000000000000000000000000000000000000000000004168 182.0
YHH3_k127_6831500_3 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.00004519 48.0
YHH3_k127_684858_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 372.0
YHH3_k127_684858_1 PFAM MucB RseB K03598 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 333.0
YHH3_k127_684858_2 An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E K03597 GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002615 281.0
YHH3_k127_684858_3 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000976 79.0
YHH3_k127_6854168_0 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component K00380 - 1.8.1.2 0.0 1044.0
YHH3_k127_6854168_1 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00381 - 1.8.1.2 5.744e-242 749.0
YHH3_k127_6854168_2 Protein of unknown function (DUF2884) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 310.0
YHH3_k127_6856227_0 Glycosyl hydrolases family 16 - - - 6.861e-213 668.0
YHH3_k127_6856227_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003945 452.0
YHH3_k127_6862432_0 carboxypeptidase - - - 0.0 1034.0
YHH3_k127_6862432_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 451.0
YHH3_k127_6868892_0 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 479.0
YHH3_k127_6868892_1 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 357.0
YHH3_k127_6868892_2 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009898,GO:0015232,GO:0015886,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019897,GO:0019898,GO:0022857,GO:0031224,GO:0031234,GO:0032991,GO:0042623,GO:0043190,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051181,GO:0051184,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098533,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:1901678,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.41 0.0000000000000000000000000000000000000226 146.0
YHH3_k127_6868892_3 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009898,GO:0015886,GO:0016020,GO:0031224,GO:0031226,GO:0031235,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051181,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098552,GO:0098562,GO:1901678 - 0.00000000000000000000004746 99.0
YHH3_k127_6871915_0 Diguanylate cyclase - - - 0.0 1631.0
YHH3_k127_6871915_1 ABC transporter transmembrane region K06147 - - 8.926e-285 884.0
YHH3_k127_6871915_2 response regulator receiver K07315 - 3.1.3.3 8.677e-205 644.0
YHH3_k127_6871915_3 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005589 557.0
YHH3_k127_6871915_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 381.0
YHH3_k127_6871915_5 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008042 257.0
YHH3_k127_6871915_6 PFAM CheB methylesterase K00575,K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000009412 184.0
YHH3_k127_6871915_7 - - - - 0.000000000000000000000000000001221 130.0
YHH3_k127_6871915_8 phosphorelay signal transduction system - - - 0.000000000003088 69.0
YHH3_k127_6924539_0 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 2.668e-238 741.0
YHH3_k127_6924539_1 Esterase of the alpha-beta hydrolase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005591 600.0
YHH3_k127_6924539_2 - - - - 0.0000000000000000000000000000000000008664 145.0
YHH3_k127_6927443_0 Part of a membrane complex involved in electron transport K03612 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006278 329.0
YHH3_k127_6927443_1 Part of a membrane complex involved in electron transport K03614 - - 0.00000000000000000000000000000000000000000000000000000000000000002199 224.0
YHH3_k127_6927443_2 Part of a membrane complex involved in electron transport K03613 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016651,GO:0031224,GO:0044425,GO:0044464,GO:0055114,GO:0071944 - 0.00000001476 57.0
YHH3_k127_6928096_0 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 479.0
YHH3_k127_6928096_1 General secretion pathway protein C K02452 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 443.0
YHH3_k127_6928096_2 Belongs to the HSP15 family K04762 - - 0.000000000000000000000000000000000000000000000000000000000000000000000263 239.0
YHH3_k127_6928096_3 general secretion pathway protein D K02453 - - 0.00000000000000000000000000000000000000000000000000000003643 198.0
YHH3_k127_6931305_0 PFAM Major Facilitator Superfamily - - - 2.298e-259 806.0
YHH3_k127_6931305_1 - - - - 9.974e-206 650.0
YHH3_k127_6931305_2 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 301.0
YHH3_k127_6931305_3 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000003533 245.0
YHH3_k127_6940697_0 asparagine synthase, glutamine-hydrolyzing K01953 GO:0000166,GO:0003674,GO:0003824,GO:0004066,GO:0004071,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006528,GO:0006529,GO:0006541,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009066,GO:0009067,GO:0009987,GO:0016053,GO:0016054,GO:0016211,GO:0016597,GO:0016874,GO:0016879,GO:0016880,GO:0016884,GO:0017076,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0034641,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046395,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901607 6.3.5.4 0.0 1115.0
YHH3_k127_6940697_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 1.17e-237 738.0
YHH3_k127_6940697_2 COG1668 ABC-type Na efflux pump, permease component K09696 - - 8.976e-218 683.0
YHH3_k127_6940697_3 succinylglutamate desuccinylase K01437 - 3.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 554.0
YHH3_k127_6940697_4 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 496.0
YHH3_k127_6940697_5 Protein of unknown function (DUF3025) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004295 397.0
YHH3_k127_6940697_6 COG2906 Bacterioferritin-associated ferredoxin K02192 - - 0.0000000000000000000007656 96.0
YHH3_k127_6947782_0 synthetase K01908 - 6.2.1.17 8.485e-306 942.0
YHH3_k127_6947782_1 PFAM Class I peptide chain release factor K15034 - - 0.0000006805 52.0
YHH3_k127_6951270_0 Phage tail sheath protein K06907 - - 0.000000000000000000000000000000000000001379 160.0
YHH3_k127_6956188_0 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000009885 208.0
YHH3_k127_6956188_1 - - - - 0.000000000000000000000000000000000000000000000000000000001444 205.0
YHH3_k127_6956188_3 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000001314 115.0
YHH3_k127_6967392_0 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 537.0
YHH3_k127_6967392_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000001858 188.0
YHH3_k127_6970440_0 twin-arginine translocation pathway signal protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008171 263.0
YHH3_k127_6970440_1 oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000004204 201.0
YHH3_k127_6970440_2 PFAM Alpha beta hydrolase K07019 - - 0.0000000000000002142 79.0
YHH3_k127_697803_0 COG3209 Rhs family protein - - - 3.331e-272 853.0
YHH3_k127_6991212_0 protein conserved in bacteria - - - 0.0 1135.0
YHH3_k127_6991212_1 PFAM Malic enzyme, NAD binding domain K00029 - 1.1.1.40 0.0 1022.0
YHH3_k127_6991212_2 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000001409 185.0
YHH3_k127_6996751_0 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 3.64e-240 745.0
YHH3_k127_6996751_1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001099 244.0
YHH3_k127_6996751_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000204 220.0
YHH3_k127_6996751_3 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000078 171.0
YHH3_k127_6996751_4 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases K00657 - 2.3.1.57 0.000000000000004927 75.0
YHH3_k127_7000946_0 PFAM Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 569.0
YHH3_k127_7000946_1 Protein of unknown function (DUF1722) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 564.0
YHH3_k127_7000946_2 Belongs to the DNA photolyase family K01669 GO:0003674,GO:0003824,GO:0003904,GO:0003913,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 484.0
YHH3_k127_7000946_3 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001549 226.0
YHH3_k127_7019592_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 1.004e-271 858.0
YHH3_k127_7019592_1 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 1.039e-213 669.0
YHH3_k127_7019592_2 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 6.046e-209 656.0
YHH3_k127_7019592_3 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 324.0
YHH3_k127_7019592_4 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0015399,GO:0015405,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051234,GO:0051641,GO:0055085,GO:0070727,GO:0071944,GO:0072657,GO:0089705,GO:0097159,GO:0097367,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1990778 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008682 280.0
YHH3_k127_7019592_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000001172 218.0
YHH3_k127_7019592_6 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 0.000000000000000000000000000499 115.0
YHH3_k127_7026100_0 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006226 594.0
YHH3_k127_7026100_1 Periplasmic or secreted lipoprotein K04065 GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000141 267.0
YHH3_k127_7026100_2 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000006982 201.0
YHH3_k127_7026100_4 Putative exonuclease SbcCD, C subunit K03546 - - 0.000000006614 59.0
YHH3_k127_7033584_0 esterase of the alpha-beta hydrolase superfamily K07001 - - 6.427e-221 689.0
YHH3_k127_7033584_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 451.0
YHH3_k127_7033584_2 Protein of unknown function (DUF3014) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 308.0
YHH3_k127_7033584_3 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 293.0
YHH3_k127_7054806_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 544.0
YHH3_k127_7054806_1 signal transduction protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 508.0
YHH3_k127_7054806_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 461.0
YHH3_k127_7054806_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005149 292.0
YHH3_k127_7054806_4 Uncharacterized protein conserved in bacteria (DUF2256) - - - 0.000000000000006477 77.0
YHH3_k127_7058669_0 Pfam:DUF303 K05970 - 3.1.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000849 427.0
YHH3_k127_7071500_0 modulator of DNA gyrase K03568 - - 5.276e-294 904.0
YHH3_k127_7071500_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family - - - 1.503e-194 608.0
YHH3_k127_7071500_2 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.000000000000000000002876 93.0
YHH3_k127_7083300_0 Belongs to the thiolase family K00632 - 2.3.1.16 2.72e-265 820.0
YHH3_k127_7083300_1 associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007723 597.0
YHH3_k127_7083300_2 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 516.0
YHH3_k127_7083300_3 PFAM von Willebrand factor type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002995 503.0
YHH3_k127_7083300_4 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001467 264.0
YHH3_k127_7083300_6 Enoyl-CoA hydratase isomerase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.0000006047 52.0
YHH3_k127_7087290_0 Carboxylesterase family K01066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 428.0
YHH3_k127_7087290_1 Nitroreductase family K10679 - 1.5.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008554 372.0
YHH3_k127_7087290_2 Protein of unknown function (DUF2955) - - - 0.0000000000000585 72.0
YHH3_k127_7092165_0 Domain of unknown function (DUF4478) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008265 469.0
YHH3_k127_7092165_1 Helix-hairpin-helix class 2 (Pol1 family) motifs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003523 422.0
YHH3_k127_7092165_2 Gram-negative-bacterium-type cell outer membrane assembly - - - 0.0000000000000000000000000000000000000000000000004141 179.0
YHH3_k127_7097837_0 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 392.0
YHH3_k127_7097837_1 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 290.0
YHH3_k127_7097837_2 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000000000000000000000000000004362 149.0
YHH3_k127_7097837_3 Thiamine monophosphate synthase K03574 - 3.6.1.55 0.000000000000000000000000000000000000001079 148.0
YHH3_k127_7097837_4 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000003193 98.0
YHH3_k127_7101695_0 PFAM NAD-glutamate dehydrogenase K15371 - 1.4.1.2 0.0 2623.0
YHH3_k127_7101695_1 MMPL family K07003 - - 0.0 1374.0
YHH3_k127_7101695_2 Photosynthesis system II assembly factor YCF48 - - - 0.000000000000000000000000000000000000000000001633 166.0
YHH3_k127_7134013_0 chain length determinant protein K10107 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 374.0
YHH3_k127_713599_0 Part of a membrane complex involved in electron transport K03615 - - 3.377e-232 721.0
YHH3_k127_713599_1 Part of a membrane complex involved in electron transport K03617 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 353.0
YHH3_k127_713599_2 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 349.0
YHH3_k127_7153080_0 aconitate hydratase K20455 - 4.2.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000001951 257.0
YHH3_k127_7153080_1 AcnD-accessory protein PrpF K09788 - - 0.000000000000000000000000000000000000000000000000000000000000006918 217.0
YHH3_k127_7157378_0 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 462.0
YHH3_k127_7157378_1 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 446.0
YHH3_k127_7157378_2 ParD-like antitoxin of type II bacterial toxin-antitoxin system - - - 0.000000000000000001126 87.0
YHH3_k127_7175373_0 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009985 324.0
YHH3_k127_7175373_1 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000147 255.0
YHH3_k127_7175640_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1142.0
YHH3_k127_7175640_1 Cytochrome C oxidase, cbb3-type, subunit III K02277 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000118 181.0
YHH3_k127_7182640_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 7.33e-262 809.0
YHH3_k127_7182640_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 329.0
YHH3_k127_7203894_0 Protein of unknown function (DUF2806) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 456.0
YHH3_k127_7203894_1 TIGRFAM Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001306 270.0
YHH3_k127_7203894_2 CheY-like receiver - - - 0.000000000000000000000000000000000000000000000000001128 192.0
YHH3_k127_7213826_0 3-Methyladenine DNA glycosylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 415.0
YHH3_k127_7213826_1 Specifically methylates the guanosine in position 1516 of 16S rRNA K15984 - 2.1.1.242 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004464 357.0
YHH3_k127_7213826_3 PFAM peptidase M3A and M3B, thimet oligopeptidase F K01414 - 3.4.24.70 0.00000000000000000000000000004218 115.0
YHH3_k127_7216180_0 Dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 378.0
YHH3_k127_7216180_1 oxidoreductase K03810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 314.0
YHH3_k127_7219168_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004435 559.0
YHH3_k127_7219168_1 CYTH - - - 0.00000001642 58.0
YHH3_k127_7223993_0 O-Antigen ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 361.0
YHH3_k127_7246471_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1438.0
YHH3_k127_7246471_1 FCD K05799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004829 410.0
YHH3_k127_726768_0 Two-component sensor kinase CbrA - - - 1.685e-267 826.0
YHH3_k127_7277682_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0 1704.0
YHH3_k127_7277682_1 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 552.0
YHH3_k127_7277682_2 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 402.0
YHH3_k127_7277682_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 376.0
YHH3_k127_7277682_4 Alpha beta hydrolase - - - 0.0000000000000000000000000000006257 123.0
YHH3_k127_7277682_5 - - - - 0.0000000000000000000002067 100.0
YHH3_k127_7284215_0 Baseplate J-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 452.0
YHH3_k127_7293532_0 SIS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 422.0
YHH3_k127_7293532_1 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 382.0
YHH3_k127_7298409_0 sigma54 specific, transcriptional regulator, Fis family K10941 - - 1.891e-248 773.0
YHH3_k127_7298409_1 Sigma-54 interaction domain K10943 - - 1.049e-224 703.0
YHH3_k127_7298409_10 PFAM flagellar hook-basal body complex protein FliE K02408 - - 0.00001207 49.0
YHH3_k127_7298409_2 Belongs to the DegT DnrJ EryC1 family - - - 1.496e-210 658.0
YHH3_k127_7298409_3 nucleoside-diphosphate sugar epimerases K15894 - 4.2.1.115 4.027e-199 622.0
YHH3_k127_7298409_4 COG2089 Sialic acid synthase K01654 - 2.5.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004771 562.0
YHH3_k127_7298409_5 COG3980 Spore coat polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 443.0
YHH3_k127_7298409_6 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 422.0
YHH3_k127_7298409_7 COG1083 CMP-N-acetylneuraminic acid synthetase K00983 - 2.7.7.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 335.0
YHH3_k127_7298409_8 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005984 249.0
YHH3_k127_7298409_9 N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000003474 222.0
YHH3_k127_7308113_0 Capsule polysaccharide biosynthesis protein K07266 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 464.0
YHH3_k127_7308113_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000007189 177.0
YHH3_k127_7308113_2 Glycosyltransferase family 29 (sialyltransferase) - - - 0.000008698 57.0
YHH3_k127_7311744_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003991 428.0
YHH3_k127_7311744_1 TIGRFAM ATP phosphoribosyltransferase, C-terminal domain K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000211 155.0
YHH3_k127_7318727_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily K06968 - 2.1.1.186 2.089e-232 720.0
YHH3_k127_7318727_1 Endonuclease/Exonuclease/phosphatase family - - - 4.216e-210 657.0
YHH3_k127_7318727_2 Alpha/beta hydrolase family K07020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 305.0
YHH3_k127_7318727_3 Protein of unknown function (DUF423) - - - 0.00008979 50.0
YHH3_k127_7330106_0 aminopeptidase - - - 0.0 1026.0
YHH3_k127_7330106_1 Transcriptional regulator, LysR family K21703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 424.0
YHH3_k127_7330106_2 Na+-dependent bicarbonate transporter superfamily K07086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 394.0
YHH3_k127_7336607_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 0.0 1753.0
YHH3_k127_7336607_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000008792 233.0
YHH3_k127_7342114_0 Belongs to the IlvD Edd family K01690 - 4.2.1.12 0.0 1019.0
YHH3_k127_7342114_1 Belongs to the bacterial glucokinase family K00845 GO:0003674,GO:0003824,GO:0004340,GO:0004396,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0051156,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006428 480.0
YHH3_k127_7342114_2 KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.00000000000000000000000000000000000000000000000008092 178.0
YHH3_k127_7349849_0 TIGRFAM 3'(2'),5'-bisphosphate nucleotidase K01082 - 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 451.0
YHH3_k127_7349849_1 Belongs to the pseudouridine synthase RsuA family K06183 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.19 0.000000000000000000000000000000000000000000000000001016 183.0
YHH3_k127_7349849_2 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.00000000000000000000000000000192 120.0
YHH3_k127_7354402_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 1.267e-226 703.0
YHH3_k127_7354402_1 ATP-NAD AcoX kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 606.0
YHH3_k127_7354402_2 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 574.0
YHH3_k127_7354402_3 Major facilitator superfamily K05820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007644 509.0
YHH3_k127_7354402_4 FKBP-type peptidyl-prolyl isomerase K03773 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 370.0
YHH3_k127_7354402_6 PFAM Smr - - - 0.000000000001516 67.0
YHH3_k127_7356364_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005472 591.0
YHH3_k127_7356364_1 MFS/sugar transport protein K03292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006772 561.0
YHH3_k127_7356364_2 Glycosyl hydrolases family 43 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 557.0
YHH3_k127_7370776_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 385.0
YHH3_k127_7370776_1 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000001256 193.0
YHH3_k127_7388589_0 Phage tail sheath protein K06907 - - 0.000000000000000000000000000000000000000000000005123 180.0
YHH3_k127_7394707_0 Glycosyl hydrolases family 43 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000387 435.0
YHH3_k127_7394707_1 Aldose 1-epimerase K01785 - 5.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000002032 256.0
YHH3_k127_7394707_2 Dienelactone hydrolase family - - - 0.00000000000000000000000005211 111.0
YHH3_k127_7400222_0 Zn-dependent hydrolases of the beta-lactamase fold - - - 1.853e-206 644.0
YHH3_k127_7400222_1 Citrate transporter - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007936 520.0
YHH3_k127_7400222_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 335.0
YHH3_k127_7400222_3 Superinfection immunity protein - - - 0.0000000000000000000000000000000000000000000000007599 175.0
YHH3_k127_7400222_4 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000001625 63.0
YHH3_k127_7406172_0 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004361 452.0
YHH3_k127_7406172_1 PFAM EAL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 441.0
YHH3_k127_7412113_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840,K15778 - 5.4.2.2,5.4.2.8 3.169e-207 654.0
YHH3_k127_7412113_1 Belongs to the mannose-6-phosphate isomerase type 2 family K00971,K16011 GO:0000271,GO:0003674,GO:0003824,GO:0004475,GO:0005975,GO:0005976,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0008152,GO:0008905,GO:0008928,GO:0009058,GO:0009059,GO:0009242,GO:0009628,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0016772,GO:0016779,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0046377,GO:0050896,GO:0070568,GO:0071704,GO:1901135,GO:1901137,GO:1901576 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 520.0
YHH3_k127_7438810_0 Tryptophan halogenase K14266 - 1.14.19.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 592.0
YHH3_k127_7455385_0 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family K05548,K08138,K08139 GO:0003674,GO:0005215,GO:0005351,GO:0005402,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008643,GO:0015075,GO:0015077,GO:0015078,GO:0015144,GO:0015145,GO:0015146,GO:0015148,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015519,GO:0015672,GO:0015749,GO:0015750,GO:0015753,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034219,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000395 283.0
YHH3_k127_7455385_1 Glycosyl hydrolases family 8 K15531 - 3.2.1.156 0.000000000000000000000000008245 115.0
YHH3_k127_7459463_0 Methyl-transferase K00563 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008270,GO:0008649,GO:0008757,GO:0008989,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046914,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.187 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 392.0
YHH3_k127_7459463_1 Belongs to the UPF0263 family K09901 - - 0.0000008127 56.0
YHH3_k127_7489251_0 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 510.0
YHH3_k127_7489251_1 TraB family K09973 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003608 259.0
YHH3_k127_7491093_0 glycosyl transferase family 2 K20444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009174 460.0
YHH3_k127_7491093_1 TIGRFAM channel protein, hemolysin III family K11068 - - 0.0000000000000000000000000000000000000000000001344 169.0
YHH3_k127_7501072_0 - - - - 8.313e-224 712.0
YHH3_k127_7501072_1 Protein of unknown function (DUF3570) - - - 2.188e-204 638.0
YHH3_k127_7501072_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 533.0
YHH3_k127_7501072_3 - - - - 0.00000000000000000000000000000000000000004039 157.0
YHH3_k127_7551069_0 protein conserved in bacteria K11891 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007774 340.0
YHH3_k127_7559841_0 Asparaginase K01424 - 3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 409.0
YHH3_k127_7559841_1 Domain of Unknown Function (DUF349) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 360.0
YHH3_k127_7565802_0 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004844 263.0
YHH3_k127_7565802_1 Membrane protein involved in colicin uptake K03646 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0016020,GO:0016021,GO:0016032,GO:0017038,GO:0019058,GO:0019904,GO:0030260,GO:0031224,GO:0031226,GO:0032153,GO:0033036,GO:0042221,GO:0042493,GO:0042886,GO:0042891,GO:0043213,GO:0044403,GO:0044409,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046677,GO:0046678,GO:0046718,GO:0046790,GO:0050896,GO:0051179,GO:0051234,GO:0051301,GO:0051701,GO:0051704,GO:0051716,GO:0051806,GO:0051828,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:0071944,GO:0097718,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701 - 0.00000000000000000000000000000000000000000000000000005787 190.0
YHH3_k127_7565802_2 PFAM MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000001439 106.0
YHH3_k127_7598219_0 Protein of unknown function DUF115 - - - 0.000000000000000000000000000000000000000000004844 175.0
YHH3_k127_7598219_1 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.000009475 49.0
YHH3_k127_7598317_0 PFAM Tex-like protein N-terminal K06959 - - 0.0 1374.0
YHH3_k127_7598317_1 Histidine kinase K07638 - 2.7.13.3 2.889e-259 801.0
YHH3_k127_7598317_2 response regulator receiver K07659 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 480.0
YHH3_k127_7598317_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001732 270.0
YHH3_k127_7598317_4 Belongs to the peptidase S8 family K20755 - 3.4.21.121 0.00000000000000000000000000000000000000000000000000000000005522 206.0
YHH3_k127_7614951_0 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 358.0
YHH3_k127_7614951_1 Beta-ketoacyl synthase, N-terminal domain K09458 - 2.3.1.179 0.000000000000000003202 86.0
YHH3_k127_7614951_2 3-hydroxylacyl-(acyl carrier protein) dehydratase - - - 0.00000000000000001093 85.0
YHH3_k127_7638820_0 COG2165 Type II secretory pathway, pseudopilin PulG K10927 - - 0.0000000000000000000000000000000000000000000001371 175.0
YHH3_k127_7638820_1 Prokaryotic N-terminal methylation motif K12285 - - 0.0000000000000000000000000000000000000000006017 167.0
YHH3_k127_7638820_2 Prokaryotic N-terminal methylation motif K10926 - - 0.00000000003182 70.0
YHH3_k127_7638820_3 Prokaryotic N-terminal methylation motif K10924 - - 0.0000002278 55.0
YHH3_k127_7644195_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F K01414 - 3.4.24.70 0.0 1242.0
YHH3_k127_7644195_1 - - - - 0.00000000000000000000002654 100.0
YHH3_k127_7644367_0 PFAM Response regulator receiver domain K07662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005699 365.0
YHH3_k127_7644367_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000008132 120.0
YHH3_k127_7644367_2 P pilus assembly Cpx signaling pathway, periplasmic inhibitor zinc-resistance associated protein K06006 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0008150,GO:0009987,GO:0010033,GO:0014070,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0044464,GO:0050896,GO:0051082,GO:0061077,GO:1990507 - 0.0000006053 55.0
YHH3_k127_7657894_0 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 2.549e-302 933.0
YHH3_k127_7657894_1 Magnesium chelatase, subunit ChlI - - - 2.547e-195 612.0
YHH3_k127_7657894_2 PFAM Binding-protein-dependent transport K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 543.0
YHH3_k127_7680267_0 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 448.0
YHH3_k127_7680267_1 Bacterial protein of unknown function (DUF898) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 446.0
YHH3_k127_7680267_2 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000004642 194.0
YHH3_k127_7680267_3 Amidohydrolase family - - - 0.0000000000000000009518 90.0
YHH3_k127_7690367_0 Tellurite resistance protein TerB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001381 255.0
YHH3_k127_7690367_1 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.000000000000000000000000000000000000000000000000000000000004149 217.0
YHH3_k127_7690367_2 - - - - 0.00000000000000000000000000000000000000001752 154.0
YHH3_k127_7691156_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501 527.0
YHH3_k127_7691156_1 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 422.0
YHH3_k127_7691156_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001029 269.0
YHH3_k127_7692202_0 protein involved in benzoate metabolism K05782 - - 2.652e-213 666.0
YHH3_k127_7692202_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.000000000000000000000000000000000000000000000000292 177.0
YHH3_k127_7727750_0 - - - - 0.00000000007954 73.0
YHH3_k127_7729743_0 Belongs to the TtcA family K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 576.0
YHH3_k127_7729743_1 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K03796 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 467.0
YHH3_k127_7729743_2 Universal stress protein family K14055 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008248 365.0
YHH3_k127_7729743_3 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004832 303.0
YHH3_k127_7729743_4 Protein of unknown function (DUF2987) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008727 263.0
YHH3_k127_7738760_0 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 442.0
YHH3_k127_7738760_1 glyoxalase bleomycin resistance protein - - - 0.000000000000000000000000000000000000000000000000000000000001059 212.0
YHH3_k127_7738760_2 PFAM Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000008034 162.0
YHH3_k127_7738760_3 diguanylate cyclase - - - 0.00000000000000000008222 98.0
YHH3_k127_7739017_0 Lipocalin-like domain K03098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 303.0
YHH3_k127_7739017_1 COG0412 Dienelactone hydrolase and related enzymes - - - 0.000000000000000000000000000000000000000000000000000000000000000000002382 240.0
YHH3_k127_7747555_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0 1215.0
YHH3_k127_7747555_1 Glycosyl hydrolase family 65, N-terminal domain K01194,K01838,K04844,K05342 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0016787,GO:0030312,GO:0044464,GO:0071944 2.4.1.64,3.2.1.28,5.4.2.6 1.211e-319 995.0
YHH3_k127_7747555_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005876 569.0
YHH3_k127_7747555_3 COG1609 Transcriptional regulators K02529,K03484 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 552.0
YHH3_k127_7747555_4 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 501.0
YHH3_k127_7747555_5 Haloacid dehalogenase-like hydrolase K01838 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008801,GO:0009292,GO:0009294,GO:0009987,GO:0016853,GO:0016866,GO:0016868,GO:0033554,GO:0042221,GO:0043167,GO:0043169,GO:0044238,GO:0044764,GO:0046677,GO:0046872,GO:0050896,GO:0051704,GO:0051716,GO:0071704 5.4.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 295.0
YHH3_k127_7747555_6 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000005081 117.0
YHH3_k127_7748022_0 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006658 434.0
YHH3_k127_7748022_1 Acyl carrier protein phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001683 246.0
YHH3_k127_7748022_2 methylated DNA-protein cysteine methyltransferase K07443 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0005488,GO:0005515,GO:0019899,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000002147 194.0
YHH3_k127_7748022_3 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.00000000000000000000000000000000000017 145.0
YHH3_k127_7748022_4 COG3783 Soluble cytochrome b562 K15536 - - 0.00000000000000000000000000000000008347 136.0
YHH3_k127_7748022_6 - - - - 0.00000000000000000000000002192 109.0
YHH3_k127_7748022_8 - - - - 0.0000000000007269 76.0
YHH3_k127_774833_0 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 343.0
YHH3_k127_774833_1 Flagellar assembly protein T, C-terminal domain - - - 0.0000000000000000000000000000000000000008112 153.0
YHH3_k127_774833_2 - - - - 0.00000000000000000002723 100.0
YHH3_k127_7755681_0 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 1.436e-209 657.0
YHH3_k127_7755681_1 paraquat-inducible protein A K03808 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003095 373.0
YHH3_k127_7770793_0 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K07106 - 4.2.1.126 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008017 443.0
YHH3_k127_7770793_1 Protein of unknown function (DUF1343) - - - 0.000000000000000000000000000000000000005267 147.0
YHH3_k127_7787001_0 Domain of unknown function (DUF4397) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000047 594.0
YHH3_k127_7787001_1 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.000000000000000000000006155 101.0
YHH3_k127_780737_0 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 - 2.5.1.54 2.201e-295 907.0
YHH3_k127_780737_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000004887 81.0
YHH3_k127_780737_2 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.000000000001361 67.0
YHH3_k127_7817844_0 OmpA family - - - 6.908e-311 955.0
YHH3_k127_7817844_1 Toxic anion resistance family protein - - - 1.567e-219 685.0
YHH3_k127_7817844_2 NMT1/THI5 like K02051 - - 5.258e-209 651.0
YHH3_k127_7817844_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006286 439.0
YHH3_k127_7817844_4 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 384.0
YHH3_k127_7817844_5 ABC-type nitrate sulfonate bicarbonate transport system, permease component K02050 - - 0.0000000000000000000000007207 108.0
YHH3_k127_7855443_0 Chloride channel - - - 1.717e-269 832.0
YHH3_k127_7855443_1 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 2.006e-207 646.0
YHH3_k127_7855443_2 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 532.0
YHH3_k127_7855443_3 Uncharacterised protein family (UPF0093) K08973 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001251 251.0
YHH3_k127_7860081_0 Pyridoxal-dependent decarboxylase conserved domain K13745 - 4.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006593 519.0
YHH3_k127_788445_0 Belongs to the DEAD box helicase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007641 602.0
YHH3_k127_7894169_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 600.0
YHH3_k127_7894169_1 TrkA-C domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 514.0
YHH3_k127_7906837_0 Domain of unknown function (DUF4386) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003401 270.0
YHH3_k127_7906837_1 Amidohydrolase family - - - 0.0000000000000000000000000000003688 124.0
YHH3_k127_7906837_2 - - - - 0.0000000000000000000000001412 113.0
YHH3_k127_7906837_3 of the alpha beta superfamily K06889 - - 0.000000000004367 69.0
YHH3_k127_7908837_0 Efflux pump K18138,K18299 - - 0.0 1335.0
YHH3_k127_7908837_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005307 353.0
YHH3_k127_7949590_0 Belongs to the DEAD box helicase family - - - 8.354e-240 745.0
YHH3_k127_7949590_1 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) K15460 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016430,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.223 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001811 272.0
YHH3_k127_7949590_2 Winged helix DNA-binding domain K09927 - - 0.000000000000000000000000000000000000000000000000000000003569 202.0
YHH3_k127_7968145_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 1.715e-253 793.0
YHH3_k127_7968145_1 Cell wall hydrolase autolysin K01448 - 3.5.1.28 3.312e-237 737.0
YHH3_k127_7968145_10 - - - - 0.00000000000000000000000000000000000000000000000002768 180.0
YHH3_k127_7968145_11 Fe-S protein K06938 - - 0.000000000000000009535 85.0
YHH3_k127_7968145_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 3.51e-229 713.0
YHH3_k127_7968145_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 4.79e-196 619.0
YHH3_k127_7968145_4 Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Prokaryotic type I sub-subfamily K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006336 539.0
YHH3_k127_7968145_5 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009965 520.0
YHH3_k127_7968145_6 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 410.0
YHH3_k127_7968145_7 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 349.0
YHH3_k127_7968145_8 MerC mercury resistance protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001026 240.0
YHH3_k127_7968145_9 ATPase or kinase K06925 - - 0.00000000000000000000000000000000000000000000000000000002274 200.0
YHH3_k127_7981100_0 PFAM Mammalian cell entry related K06192 - - 8.638e-200 626.0
YHH3_k127_7999962_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009003 369.0
YHH3_k127_7999962_1 PFAM Bile acid sodium symporter K03453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 297.0
YHH3_k127_7999962_2 - - - - 0.00000000000000000000000000000000000001817 149.0
YHH3_k127_8003857_0 COG0500 SAM-dependent methyltransferases - - - 2.068e-205 644.0
YHH3_k127_8018906_0 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.0 1152.0
YHH3_k127_8018906_1 response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009401 290.0
YHH3_k127_8018906_2 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000008077 241.0
YHH3_k127_804854_0 peptidylprolyl isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006149 513.0
YHH3_k127_8051501_0 Protein of unknown function (DUF2914) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006343 518.0
YHH3_k127_8051501_1 synthetase K01908 - 6.2.1.17 0.000000000000000000000000000000000000000000000000000000001572 201.0
YHH3_k127_8061352_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 2206.0
YHH3_k127_8061352_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 8.395e-198 617.0
YHH3_k127_8061352_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 350.0
YHH3_k127_8061352_3 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0003824,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008194,GO:0008289,GO:0008610,GO:0008654,GO:0008915,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0019637,GO:0019897,GO:0019898,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000003554 200.0
YHH3_k127_8061352_4 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000009551 126.0
YHH3_k127_8064995_0 2OG-Fe(II) oxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003542 252.0
YHH3_k127_8064995_1 Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions - GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0017144,GO:0034641,GO:0042723,GO:0044237,GO:0044281,GO:0046483,GO:0071704,GO:0072527,GO:1901360,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000104 229.0
YHH3_k127_8065552_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 1.18e-196 615.0
YHH3_k127_8065552_1 Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate K00899 - 2.7.1.100 0.00000000000000000000000000000000000000000000000000000000000000000003011 235.0
YHH3_k127_8067791_0 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 524.0
YHH3_k127_8067791_1 DNA polymerase III, delta' K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 408.0
YHH3_k127_8067791_2 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005259 332.0
YHH3_k127_8067791_3 PFAM Aminotransferase, class IV K02619 - 4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000001832 256.0
YHH3_k127_8071516_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007423 381.0
YHH3_k127_8071516_1 - - - - 0.000000000000000000000002144 102.0
YHH3_k127_8080287_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 1.37e-295 911.0
YHH3_k127_8091990_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 6.543e-280 865.0
YHH3_k127_8091990_1 TrkA-C domain - - - 0.0000000000000000000000000000000000000000000000000000000000001789 213.0
YHH3_k127_8091990_2 TIGRFAM sulfate adenylyltransferase, small subunit K00957 - 2.7.7.4 0.0000000000000000000000000000000000000000005662 157.0
YHH3_k127_8103233_0 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - - - 1.411e-255 794.0
YHH3_k127_8103233_1 DNA Recombination protein RmuC K09760 GO:0006139,GO:0006259,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:1901360 - 4.955e-212 663.0
YHH3_k127_8103233_2 AI-2E family transporter K03548 - - 2.693e-195 613.0
YHH3_k127_8103233_3 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 388.0
YHH3_k127_8103233_4 Belongs to the WrbA family K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005143 331.0
YHH3_k127_8103233_5 Predicted membrane protein (DUF2069) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002289 238.0
YHH3_k127_8103233_6 Arsenate reductase and related K00537 - 1.20.4.1 0.00000000000000000000000000000000000000000000001378 173.0
YHH3_k127_8103233_7 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.0000000000000001177 80.0
YHH3_k127_8103233_8 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.0000007014 52.0
YHH3_k127_8103526_0 Belongs to the peptidase S8 family - - - 7.888e-281 872.0
YHH3_k127_8105169_0 RNA-metabolising metallo-beta-lactamase K07576 - - 9.849e-261 809.0
YHH3_k127_8105169_1 Prephenate dehydrogenase K04517 - 1.3.1.12 2.132e-199 625.0
YHH3_k127_8105169_2 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000739 504.0
YHH3_k127_8105169_3 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 497.0
YHH3_k127_8105169_4 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003546 437.0
YHH3_k127_8105169_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase K08234 - - 0.0000000000000000000000000000000000000000000000000000000000000000007156 229.0
YHH3_k127_8111711_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1335.0
YHH3_k127_8111711_1 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000002264 189.0
YHH3_k127_811283_0 Secretion system protein K12276 - - 7.449e-276 852.0
YHH3_k127_8114974_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 396.0
YHH3_k127_8114974_1 Hemolysins and related proteins containing CBS domains - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002232 269.0
YHH3_k127_8114974_2 Protein of unknown function (DUF3718) - - - 0.0000000000000000000000000000000000000000002178 162.0
YHH3_k127_8114974_3 Natural resistance-associated macrophage protein K03322 - - 0.0000000000000000000000000008549 114.0
YHH3_k127_8119919_0 - - - - 8.205e-259 812.0
YHH3_k127_8119919_1 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 6.066e-208 649.0
YHH3_k127_8123700_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1120.0
YHH3_k127_8123700_1 Copper resistance protein D K07245 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 343.0
YHH3_k127_8123700_2 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006776 303.0
YHH3_k127_8123700_3 PFAM regulatory protein, MerR K19591 - - 0.000000000000000000000000000000000000000000000000000000000000002419 220.0
YHH3_k127_8128282_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 2.401e-289 908.0
YHH3_k127_8128282_1 Glycosyl hydrolase family 3 C-terminal domain K05349 - 3.2.1.21 0.0001643 45.0
YHH3_k127_8142656_0 Belongs to the UPF0276 family K09930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 410.0
YHH3_k127_8142656_1 Putative DNA-binding domain K09929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007615 322.0
YHH3_k127_8142656_2 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000001124 219.0
YHH3_k127_8143533_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 6.61e-248 767.0
YHH3_k127_8143533_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 494.0
YHH3_k127_8143533_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 316.0
YHH3_k127_8143533_3 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004571 278.0
YHH3_k127_8145399_0 periplasmic ligand-binding sensor domain - - - 0.0 1615.0
YHH3_k127_8145399_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1127.0
YHH3_k127_8145399_2 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 570.0
YHH3_k127_8145399_3 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 486.0
YHH3_k127_8145399_4 PFAM MotA TolQ ExbB proton channel K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 455.0
YHH3_k127_8145399_5 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000000000000000000002345 179.0
YHH3_k127_8145399_6 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 - 2.8.1.4 0.0000000000000000000000000000000003457 133.0
YHH3_k127_8145399_7 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000000000000000000006397 132.0
YHH3_k127_8158629_0 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 307.0
YHH3_k127_8161058_0 inner membrane component K02011 - - 7.361e-291 899.0
YHH3_k127_8161058_1 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008982 577.0
YHH3_k127_8161058_2 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.00000000000000000000000000000000000000009142 153.0
YHH3_k127_8161058_3 extracellular solute-binding protein K02012 - - 0.000000000000000000000009448 100.0
YHH3_k127_8167677_0 COG0841 Cation multidrug efflux pump K03296,K18138 - - 2.69e-233 728.0
YHH3_k127_817565_0 Protein kinase domain K12132 - 2.7.11.1 2.209e-280 865.0
YHH3_k127_817565_1 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000003715 224.0
YHH3_k127_8179923_0 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA - - - 2.365e-223 694.0
YHH3_k127_8183292_0 TonB dependent receptor - - - 0.0 1377.0
YHH3_k127_8183292_1 Gram-negative porin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 406.0
YHH3_k127_8183292_2 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007712 377.0
YHH3_k127_8183292_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000454 347.0
YHH3_k127_8220620_0 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003272 249.0
YHH3_k127_8220620_2 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.000000000001568 66.0
YHH3_k127_8223760_0 PFAM LppC K07121 - - 6.185e-256 802.0
YHH3_k127_8223760_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006334 524.0
YHH3_k127_8223760_2 Receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 494.0
YHH3_k127_8223760_3 Protein of unknown function, DUF599 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006667 402.0
YHH3_k127_8223760_4 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 353.0
YHH3_k127_8223760_5 PFAM transport-associated - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005037 317.0
YHH3_k127_8223760_6 Rard protein K05786 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016021,GO:0031224,GO:0044425,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002535 269.0
YHH3_k127_8223760_7 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000000000000000000000000000002866 189.0
YHH3_k127_8223760_8 - - - - 0.00000000000000000000000000000000007114 138.0
YHH3_k127_8226376_0 6-phosphogluconolactonase activity - - - 0.0000000000000000000000000000000000000002837 165.0
YHH3_k127_8226376_1 family outer membrane protein - - - 0.0000000000000000000000000000000000155 151.0
YHH3_k127_8232405_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0 1043.0
YHH3_k127_8232405_1 response regulator K07689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 417.0
YHH3_k127_8232405_2 Belongs to the BI1 family K19416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002468 253.0
YHH3_k127_8236506_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 570.0
YHH3_k127_8241859_0 N-terminal 7TM region of histidine kinase - - - 9.613e-311 962.0
YHH3_k127_8241859_1 response regulator receiver K02481 - - 2.786e-256 795.0
YHH3_k127_8241859_2 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 349.0
YHH3_k127_8241859_3 Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009994 267.0
YHH3_k127_824236_0 Polysaccharide pyruvyl transferase K16710 - - 4.868e-211 659.0
YHH3_k127_824236_1 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 367.0
YHH3_k127_824236_2 Cold-shock protein, DNA-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000006681 236.0
YHH3_k127_824236_3 Dystroglycan-type cadherin domain protein K11005 - - 0.0000000000000000000000000000000000000000000000000000000000000001641 224.0
YHH3_k127_824236_4 - - - - 0.0000000000000000000000000000000000000000000003007 168.0
YHH3_k127_824236_5 GrpB protein - - - 0.00000000004746 66.0
YHH3_k127_8244757_0 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000002161 161.0
YHH3_k127_8244757_1 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000000000000004286 101.0
YHH3_k127_8244757_2 - - - - 0.00000000002956 76.0
YHH3_k127_8245369_0 HemY protein K02498 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007384 520.0
YHH3_k127_8245369_1 Uracil DNA glycosylase superfamily - - - 0.000000000000000000000000000000000000000000000000000007759 196.0
YHH3_k127_8245369_2 HemX, putative uroporphyrinogen-III C-methyltransferase K02496 - 2.1.1.107 0.000000000000001103 79.0
YHH3_k127_8256567_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 5.292e-262 812.0
YHH3_k127_8256567_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009082 556.0
YHH3_k127_8256567_2 PFAM UBA THIF-type NAD FAD binding K22132 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 481.0
YHH3_k127_8256567_3 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005523 449.0
YHH3_k127_8256567_4 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 437.0
YHH3_k127_8256567_5 pseudouridine synthase Rlu family protein K06177 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004425 353.0
YHH3_k127_8256567_6 PFAM Fe-S metabolism associated K02426 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002484 261.0
YHH3_k127_8256567_7 Belongs to the UPF0434 family K09791 - - 0.0000000000000003463 79.0
YHH3_k127_8258244_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0 1458.0
YHH3_k127_8258244_1 SapC - - - 0.000000000000000000000000000000000000001723 149.0
YHH3_k127_8264247_0 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 514.0
YHH3_k127_8264247_1 COG0226 ABC-type phosphate transport system, periplasmic component - - - 0.000000000000000000000000000000000000000001194 160.0
YHH3_k127_8271158_0 Domain of unknown function (DUF4862) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000507 555.0
YHH3_k127_8271158_1 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA - - - 0.00000000000000000001793 96.0
YHH3_k127_8276315_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000375 391.0
YHH3_k127_8276315_1 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 304.0
YHH3_k127_8276315_2 Histidine kinase - - - 0.000000000000000000004151 94.0
YHH3_k127_8276315_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000005273 68.0
YHH3_k127_8285050_0 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 2.452e-293 902.0
YHH3_k127_8285050_1 PFAM TrkA-N domain K03499 - - 1.132e-281 869.0
YHH3_k127_8285050_2 Splits dipeptides with a prolyl residue in the C- terminal position K01271 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009056,GO:0009987,GO:0016787,GO:0016805,GO:0019538,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0070573,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.13.9 5.118e-277 854.0
YHH3_k127_8285050_3 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 3.487e-237 738.0
YHH3_k127_8285050_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008084 511.0
YHH3_k127_8285050_5 PFAM Lytic K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005464 479.0
YHH3_k127_8285050_6 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 302.0
YHH3_k127_8285050_7 PFAM Peptidoglycan-binding lysin domain - - - 0.000000000000000000000000000000000000000000001097 167.0
YHH3_k127_8308039_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 2.093e-194 609.0
YHH3_k127_8308039_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 289.0
YHH3_k127_8308840_0 amine dehydrogenase activity - - - 2.558e-223 699.0
YHH3_k127_8308840_1 extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 468.0
YHH3_k127_8308840_2 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009113 449.0
YHH3_k127_8330524_0 PFAM MORN variant repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006625 281.0
YHH3_k127_8350529_0 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008095 413.0
YHH3_k127_8350529_1 Long-chain fatty acid--CoA ligase - - - 0.00000000000000000000000000000000000000000000000000002986 194.0
YHH3_k127_8381843_0 PFAM Sodium sulphate symporter K14445 - - 6.361e-205 647.0
YHH3_k127_8381843_1 Belongs to the pseudouridine synthase RsuA family K06182,K06183 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.19,5.4.99.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009929 466.0
YHH3_k127_8381843_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 302.0
YHH3_k127_8412769_0 Histidine Phosphotransfer domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007026 542.0
YHH3_k127_8412769_1 COG4242 Cyanophycinase and related exopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000002326 204.0
YHH3_k127_8416068_0 Middle or third domain of peptidase_M16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 563.0
YHH3_k127_8443050_0 Belongs to the BCCT transporter (TC 2.A.15) family K03451 - - 1.722e-309 953.0
YHH3_k127_8443050_1 phosphate-selective porin O and P - - - 5.816e-196 618.0
YHH3_k127_8443050_2 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006669 542.0
YHH3_k127_8443050_3 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 535.0
YHH3_k127_8443050_4 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000933 244.0
YHH3_k127_8445451_0 Oxidoreductase - - - 3.427e-315 975.0
YHH3_k127_8445451_1 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 6.063e-256 801.0
YHH3_k127_8445451_2 COG1082 Sugar phosphate isomerases epimerases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004151 531.0
YHH3_k127_8445451_3 transcriptional K05499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 403.0
YHH3_k127_8445451_4 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 289.0
YHH3_k127_8445451_5 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000003485 231.0
YHH3_k127_8445451_6 Gluconate 2-dehydrogenase subunit 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000003421 227.0
YHH3_k127_8445451_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000007634 64.0
YHH3_k127_8452553_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 3.58e-226 705.0
YHH3_k127_8452553_1 DinB family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006011 306.0
YHH3_k127_8452553_2 PFAM UBA THIF-type NAD FAD binding K21029 - 2.7.7.80 0.00000000000000000000000000000000003769 134.0
YHH3_k127_8467738_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 584.0
YHH3_k127_8467738_1 Exopolysaccharide biosynthesis protein YbjH - GO:0000271,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016051,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0045226,GO:0046379,GO:0071704,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 339.0
YHH3_k127_8467738_2 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase - - - 0.000000000000000003335 85.0
YHH3_k127_8481867_0 PFAM LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 391.0
YHH3_k127_8481867_1 thiol oxidoreductase - - - 0.0000000000000000000000007082 108.0
YHH3_k127_8481867_2 copper chaperone K07213 - - 0.0002378 45.0
YHH3_k127_849599_0 TrkA-C domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 362.0
YHH3_k127_849599_1 Catalyzes the synthesis of activated sulfate K00860,K00958 - 2.7.1.25,2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004436 316.0
YHH3_k127_849599_2 single-stranded DNA 5'-3' exodeoxyribonuclease activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 314.0
YHH3_k127_849599_3 UDP binding domain K00012 - 1.1.1.22 0.00000000000002401 73.0
YHH3_k127_8497162_0 Tricorn protease C1 domain K08676 - - 2.667e-295 910.0
YHH3_k127_8502792_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1362.0
YHH3_k127_8502792_1 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.0 1144.0
YHH3_k127_850530_0 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007407 575.0
YHH3_k127_8520388_0 Winged helix DNA-binding domain K09927 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001176 277.0
YHH3_k127_8520388_1 Low-potential electron donor to a number of redox enzymes K03840 GO:0000166,GO:0003674,GO:0005488,GO:0010181,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000005511 249.0
YHH3_k127_8526955_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 286.0
YHH3_k127_8526955_2 PAS fold - - - 0.00000000000000000000000000000000000002021 153.0
YHH3_k127_8526955_3 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0000008978 54.0
YHH3_k127_8532857_0 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002136 334.0
YHH3_k127_8532857_1 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 317.0
YHH3_k127_8532857_2 Tautomerase enzyme K01821 - 5.3.2.6 0.000000000000000000000000001689 113.0
YHH3_k127_8535340_0 Prepilin-type cleavage methylation-like K02672 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 450.0
YHH3_k127_8535340_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 391.0
YHH3_k127_8535340_2 COG4970 Tfp pilus assembly protein FimT K08084 - - 0.000000000000000000000000000000000000000000000000000000000001028 213.0
YHH3_k127_8535340_3 type IV pilus modification protein PilV K02458,K02671 - - 0.00000000000000000000000000000000000000000000000764 176.0
YHH3_k127_8535340_4 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.0000000000000000000000000000000001874 136.0
YHH3_k127_8536956_0 PFAM Cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003834 447.0
YHH3_k127_8536956_1 Protein of unknown function (DUF3224) - - - 0.000000000000000000000000000000000000000000000000396 178.0
YHH3_k127_8536956_2 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000001633 166.0
YHH3_k127_8538618_0 Calcineurin-like phosphoesterase - - - 1.209e-213 678.0
YHH3_k127_8542480_0 PFAM Magnesium chelatase, ChlI subunit K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 430.0
YHH3_k127_8542480_1 MMPL family K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 403.0
YHH3_k127_8543176_0 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007135 601.0
YHH3_k127_8543176_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007858 516.0
YHH3_k127_8543176_2 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006339 477.0
YHH3_k127_8543176_3 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003203 428.0
YHH3_k127_8543176_4 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 411.0
YHH3_k127_8543176_5 - - - - 0.0000000000000000000000000000000000000000000000000003511 187.0
YHH3_k127_8558204_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 2.878e-205 641.0
YHH3_k127_8558204_1 short chain dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005073 250.0
YHH3_k127_8573828_0 Metallo-beta-lactamase superfamily - - - 0.0 1218.0
YHH3_k127_8573828_1 Sigma-70, region 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007661 363.0
YHH3_k127_8573828_2 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity K01118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 334.0
YHH3_k127_8573828_3 COG3806 Anti-sigma factor K07167 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006021 292.0
YHH3_k127_8573828_4 Multifunctional regulator of fatty acid metabolism K03603 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006355,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010563,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019216,GO:0019217,GO:0019219,GO:0019220,GO:0019222,GO:0019395,GO:0019752,GO:0030258,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032787,GO:0032991,GO:0032993,GO:0034440,GO:0042304,GO:0043436,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045723,GO:0045833,GO:0045834,GO:0045892,GO:0045893,GO:0045923,GO:0045934,GO:0045935,GO:0045936,GO:0046889,GO:0046890,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051252,GO:0051253,GO:0051254,GO:0055114,GO:0060255,GO:0062012,GO:0062013,GO:0065007,GO:0071071,GO:0071072,GO:0071704,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1903725,GO:1903726,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000004629 80.0
YHH3_k127_8586360_0 arabinose efflux permease K03445 - - 6.796e-198 624.0
YHH3_k127_8586360_1 Cytochrome c oxidase accessory protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005246 328.0
YHH3_k127_8586360_2 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 328.0
YHH3_k127_8586360_3 Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions K02553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 312.0
YHH3_k127_8586360_5 Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions K02553 - - 0.000000000000000000000004898 102.0
YHH3_k127_8587503_0 regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 392.0
YHH3_k127_8618657_0 response regulator receiver - - - 2.505e-203 641.0
YHH3_k127_8618657_1 TIGRFAM TIGR00645 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002888 221.0
YHH3_k127_8636388_0 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 3.911e-221 690.0
YHH3_k127_8652556_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1165.0
YHH3_k127_8652556_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000002684 73.0
YHH3_k127_8659461_0 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 470.0
YHH3_k127_8659461_1 threonine efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006485 248.0
YHH3_k127_8673852_0 Beta-lactamase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009986 342.0
YHH3_k127_8696747_0 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 5.136e-196 617.0
YHH3_k127_87065_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 6.591e-269 830.0
YHH3_k127_87065_1 Histidine kinase K07645 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 415.0
YHH3_k127_87065_2 - - - - 0.000000000000000000002285 94.0
YHH3_k127_871291_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009133 457.0
YHH3_k127_871291_1 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 346.0
YHH3_k127_8715133_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 538.0
YHH3_k127_8715133_1 Response regulator of the LytR AlgR family K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 496.0
YHH3_k127_8715133_2 Histidine kinase K08082 - 2.7.13.3 0.00000000000000000006187 91.0
YHH3_k127_8720592_0 ABC transporter K15738 - - 5.334e-240 743.0
YHH3_k127_8728798_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 9.496e-249 771.0
YHH3_k127_8738685_0 Site-specific recombinase - - - 0.0 1037.0
YHH3_k127_8738685_1 aminoacyl-histidine dipeptidase K01270 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008270,GO:0009056,GO:0009987,GO:0016787,GO:0016805,GO:0019538,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0070573,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 8.694e-282 870.0
YHH3_k127_8738685_2 periplasmic ligand-binding sensor domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 596.0
YHH3_k127_8738685_3 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009096 472.0
YHH3_k127_8738685_4 LysR substrate binding domain K10918 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 389.0
YHH3_k127_8738685_5 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 303.0
YHH3_k127_8753105_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome - - - 0.0 1369.0
YHH3_k127_8753105_1 Circularly permuted ATP-grasp type 2 - - - 3.302e-278 861.0
YHH3_k127_8753105_2 PFAM Bacterial domain of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 467.0
YHH3_k127_8753105_3 A predicted alpha-helical domain with a conserved ER motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 455.0
YHH3_k127_8753105_4 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000000004093 194.0
YHH3_k127_8753105_5 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases K03829 - - 0.0000000000000000000000000000008752 124.0
YHH3_k127_8753105_6 -acetyltransferase K03829 GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031248,GO:0031365,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564,GO:1902493,GO:1902494,GO:1990234 - 0.00000000000000000173 85.0
YHH3_k127_8753249_0 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 494.0
YHH3_k127_8753249_1 Cobalt uptake substrate-specific transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001481 271.0
YHH3_k127_8753249_2 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000288 264.0
YHH3_k127_8753845_0 Tricorn protease C1 domain K08676 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 530.0
YHH3_k127_8753845_1 Protein of unknown function (DUF533) - - - 0.0000000000000000000000000000000000000000000000000001179 188.0
YHH3_k127_8756386_0 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 347.0
YHH3_k127_8756386_1 PFAM Phosphoglycerate mutase K08296 - - 0.00000000000000000000000000000000000000000000000000000000000000000734 228.0
YHH3_k127_8756386_2 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.000000000000000000000000000000000000000000007733 166.0
YHH3_k127_8756386_3 acyl-CoA thioesterase K01073 - 3.1.2.20 0.000000001435 59.0
YHH3_k127_8762975_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006537 561.0
YHH3_k127_8762975_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 518.0
YHH3_k127_8763539_0 Pyridoxal-dependent decarboxylase conserved domain K13745 - 4.1.1.86 0.0 1045.0
YHH3_k127_8763539_1 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004827 440.0
YHH3_k127_8763539_2 Protein of unknown function (DUF2959) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006999 318.0
YHH3_k127_8763539_3 Fumarate reductase subunit D K00247 GO:0000104,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0008177,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016627,GO:0016635,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803 - 0.0000000000000000000000000000000000000004214 154.0
YHH3_k127_8763539_4 - - - - 0.000000000000000000000000000000001069 130.0
YHH3_k127_8763539_5 Fumarate reductase subunit C K00246 - - 0.00000000000000000004402 90.0
YHH3_k127_87642_0 Prolyl oligopeptidase - - - 0.0 1058.0
YHH3_k127_87642_1 Belongs to the ParA family K03609 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009772 513.0
YHH3_k127_87642_2 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.000000000000000000000000000000000000000003895 155.0
YHH3_k127_87642_3 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.00000000000000000000000000000000000000008525 151.0
YHH3_k127_879518_0 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 468.0
YHH3_k127_879518_1 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000008433 219.0
YHH3_k127_8797150_0 Belongs to the peptidase S51 family - - - 4.75e-270 835.0
YHH3_k127_8797150_1 - - - - 0.0000000000000000001033 95.0
YHH3_k127_8810091_0 Sulfite exporter TauE/SafE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 419.0
YHH3_k127_8810091_1 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005318 265.0
YHH3_k127_8810091_2 Transporter Component K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000001181 235.0
YHH3_k127_8810091_3 transporter component K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000007489 232.0
YHH3_k127_8810091_4 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000001564 205.0
YHH3_k127_8825278_0 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 296.0
YHH3_k127_8825278_1 IG-like fold at C-terminal of FixG, putative oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000004796 191.0
YHH3_k127_883245_0 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 460.0
YHH3_k127_883245_1 Periplasmic component of amino acid ABC-type transporter signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000001049 230.0
YHH3_k127_8846481_0 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 7.505e-253 779.0
YHH3_k127_8846481_1 Fumarylacetoacetate (FAA) hydrolase family K16171 - 3.7.1.2 4.393e-204 636.0
YHH3_k127_8846481_2 Glutathione S-transferase, N-terminal domain K01801 - 5.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 354.0
YHH3_k127_8846481_3 response regulator receiver K03415 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 335.0
YHH3_k127_886114_0 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0 1199.0
YHH3_k127_886114_1 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008017 600.0
YHH3_k127_886114_2 Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host K05801 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 434.0
YHH3_k127_886114_3 Protein of unknown function (DUF3530) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 312.0
YHH3_k127_8862168_0 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009981 280.0
YHH3_k127_8862168_1 PFAM Tripartite ATP-independent periplasmic transporter, DctQ component - - - 0.0000000000000000000000001207 109.0
YHH3_k127_8878690_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 2.607e-235 732.0
YHH3_k127_8878690_1 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 581.0
YHH3_k127_8878690_2 signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004062 246.0
YHH3_k127_8904863_0 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 448.0
YHH3_k127_8904863_1 AI-2E family transporter - - - 0.00000000000000000000000277 102.0
YHH3_k127_8917107_0 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 2.039e-198 620.0
YHH3_k127_8917107_1 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007171 372.0
YHH3_k127_8925173_0 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 344.0
YHH3_k127_8925173_1 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000003546 186.0
YHH3_k127_8954577_0 TIGRFAM Cytochrome c-type biogenesis protein CcmI K02200 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002737 603.0
YHH3_k127_8954577_1 TIGRFAM periplasmic protein K02199 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 329.0
YHH3_k127_8954577_2 PFAM VacJ family lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003864 294.0
YHH3_k127_8954577_3 subunit of a heme lyase K02200 - - 0.0000000000000000000000000000000000000000000000000000001005 199.0
YHH3_k127_8964095_0 HELICc2 K03722 - 3.6.4.12 1.046e-234 730.0
YHH3_k127_8964095_1 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 - 1.13.11.11 2.796e-194 607.0
YHH3_k127_8964095_2 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 465.0
YHH3_k127_8964095_3 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 329.0
YHH3_k127_8964095_4 DNA replication, synthesis of RNA primer K04067 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000002575 250.0
YHH3_k127_8969173_0 Domain of unknown function (DUF3369) - - - 1.833e-307 946.0
YHH3_k127_8969173_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 2.311e-232 723.0
YHH3_k127_8969173_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 9.33e-223 692.0
YHH3_k127_8969173_3 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000715 384.0
YHH3_k127_8969173_4 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001706 248.0
YHH3_k127_8969173_5 PFAM Invasion gene expression up-regulator SirB - - - 0.00000000000000000000000000000000000000000000000000000000000002083 216.0
YHH3_k127_8970706_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 1.422e-284 876.0
YHH3_k127_8970706_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 396.0
YHH3_k127_8974511_0 PFAM H transporting two-sector ATPase alpha beta subunit central region K02412 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 591.0
YHH3_k127_8974511_2 - - - - 0.00000002368 61.0
YHH3_k127_8994909_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0006871 51.0
YHH3_k127_8995130_0 TonB dependent receptor K02014 - - 5.021e-294 917.0
YHH3_k127_8995130_1 UPF0126 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 372.0
YHH3_k127_8995130_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003544 331.0
YHH3_k127_8995130_3 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000332 265.0
YHH3_k127_8995130_4 PepSY-associated TM region - - - 0.00000000000000000000000000000000000000001145 167.0
YHH3_k127_8995130_5 - - - - 0.000000000000000000079 89.0
YHH3_k127_8999571_0 Hydrophobe Amphiphile Efflux-1 (HAE1) K18138 - - 2.539e-206 644.0
YHH3_k127_8999571_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006374 532.0
YHH3_k127_8999571_2 Redox protein regulator of disulfide bond formation K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001059 248.0
YHH3_k127_8999571_3 COG0500 SAM-dependent methyltransferases - - - 0.000000000000000000000004257 101.0
YHH3_k127_9001780_0 Rhomboid-type serine protease that catalyzes intramembrane proteolysis K02441 GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019219,GO:0019222,GO:0019538,GO:0031224,GO:0031226,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0042802,GO:0043170,GO:0043565,GO:0044212,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0080090,GO:0097159,GO:0140096,GO:1901363,GO:1901564,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 430.0
YHH3_k127_9001780_1 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009007 280.0
YHH3_k127_9001780_2 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000007258 263.0
YHH3_k127_9001780_3 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000000000000000000000000000000000000000005875 201.0
YHH3_k127_9001780_4 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000009327 191.0
YHH3_k127_9001780_5 Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide - - - 0.00000000000000000000000000000000000000000002218 163.0
YHH3_k127_9001804_0 DNA photolyase K01669 - 4.1.99.3 7.164e-265 822.0
YHH3_k127_9001804_1 Catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009612 418.0
YHH3_k127_9001804_2 DNA photolyase K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000002439 218.0
YHH3_k127_9007770_0 FAD-dependent dehydrogenases - - - 0.0 1006.0
YHH3_k127_9007770_1 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000000000000000000000001765 215.0
YHH3_k127_9024576_0 PFAM SapC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 361.0
YHH3_k127_9024576_1 COG3525 N-acetyl-beta-hexosaminidase K12373 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000002201 209.0
YHH3_k127_9030618_0 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 0.0 1195.0
YHH3_k127_9030618_1 TIGRFAM ATP-dependent helicase HrpB K03579 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009244 542.0
YHH3_k127_9030618_2 Transcriptional regulatory protein, C terminal - - - 0.0000000000005248 69.0
YHH3_k127_9042268_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 353.0
YHH3_k127_9042268_1 glycosyl transferase family 2 K20444 - - 0.00000000000000000000000000000000000000000000000000000001934 203.0
YHH3_k127_9042268_2 glycosyl transferase family 2 K20444 - - 0.0000005113 51.0
YHH3_k127_9053710_0 Peptidase family M28 - - - 4.423e-299 923.0
YHH3_k127_9053710_1 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000004831 220.0
YHH3_k127_9080493_0 COG5595 Zn-ribbon-containing possibly nucleic-acid-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 400.0
YHH3_k127_9080493_1 Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function K15723 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009898,GO:0016020,GO:0019897,GO:0019898,GO:0031234,GO:0043254,GO:0044087,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0065007,GO:0071944,GO:0098552,GO:0098562 - 0.000000000000000000000000000000006364 130.0
YHH3_k127_9081027_0 TIGRFAM ATP-dependent helicase HrpB K03579 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 539.0
YHH3_k127_9083066_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1055.0
YHH3_k127_9083066_1 response regulator K07664,K18144 - - 0.000000000000543 70.0
YHH3_k127_9084912_0 The M ring may be actively involved in energy transduction K02409 - - 1.472e-241 758.0
YHH3_k127_9084912_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000868 552.0
YHH3_k127_9084912_2 PFAM flagellar motor switch protein FliG K02410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 456.0
YHH3_k127_9084912_3 COG2885 Outer membrane protein and related peptidoglycan-associated K21218 - - 0.00000000000000000000000000000000000000000000009812 179.0
YHH3_k127_9084912_4 Flagellar hook-basal body complex protein FliE K02408 - - 0.000000000000000000000000000000371 125.0
YHH3_k127_9103354_0 PFAM regulatory protein LuxR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001197 265.0
YHH3_k127_9103354_1 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.00000000000000000000000000000000000000181 150.0
YHH3_k127_9151067_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582 GO:0000166,GO:0000724,GO:0000725,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008854,GO:0009314,GO:0009338,GO:0009628,GO:0009987,GO:0015616,GO:0016043,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017076,GO:0017111,GO:0030554,GO:0032392,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044355,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0099046,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 327.0
YHH3_k127_9160318_0 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 2.917e-225 701.0
YHH3_k127_9160318_1 DNA segregation ATPase FtsK SpoIIIE K03466 - - 5.932e-197 620.0
YHH3_k127_9160318_2 Acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 535.0
YHH3_k127_9160318_3 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 416.0
YHH3_k127_9160318_4 SMART Transcription regulator, AsnC-type K03719 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 308.0
YHH3_k127_9160318_5 PFAM Cold-shock K03704 - - 0.000000000000000000000000000000000000006935 145.0
YHH3_k127_9170416_0 Sulfite exporter TauE/SafE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 540.0
YHH3_k127_9170416_1 Tryptophan halogenase K14266 - 1.14.19.9 0.0000003779 53.0
YHH3_k127_9180637_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 542.0
YHH3_k127_9180637_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 458.0
YHH3_k127_9180637_2 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000007141 163.0
YHH3_k127_9180637_3 Ferredoxin K11107 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0006124,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0019538,GO:0022900,GO:0030091,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0048037,GO:0051536,GO:0051537,GO:0051540,GO:0055114,GO:0071704,GO:1901564 - 0.000000000000000000000000000000000000000001874 156.0
YHH3_k127_9196576_0 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme - - - 1.226e-265 822.0
YHH3_k127_9196576_1 Thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 472.0
YHH3_k127_9196576_2 TIGRFAM sulfate adenylyltransferase, small subunit K00957 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 454.0
YHH3_k127_9208895_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 307.0
YHH3_k127_9208895_1 Protein of unknown function (DUF3016) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008763 252.0
YHH3_k127_9213160_0 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 2.587e-214 667.0
YHH3_k127_9213160_1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00263 - 1.4.1.9 1.104e-204 639.0
YHH3_k127_9213160_2 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005531 492.0
YHH3_k127_9213160_3 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 294.0
YHH3_k127_9213160_4 Domain of unknown function (DUF4826) - - - 0.00000000000000000000000000000000000000000000000000000000000000000007411 235.0
YHH3_k127_9213160_5 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000002056 191.0
YHH3_k127_9237690_0 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 346.0
YHH3_k127_9237690_1 Histidine ammonia-lyase K01745 GO:0003674,GO:0003824,GO:0004397,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016840,GO:0016841,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564 4.3.1.3 0.00000002786 55.0
YHH3_k127_9251092_0 PFAM peptidase S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003176 411.0
YHH3_k127_9251092_1 Asparaginase K01424 - 3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000001796 225.0
YHH3_k127_9258832_0 PFAM Citrate transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 439.0
YHH3_k127_9258832_1 COG0834 ABC-type amino acid transport signal transduction systems, periplasmic component domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001814 245.0
YHH3_k127_9258832_2 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003411 235.0
YHH3_k127_9258832_3 Asp/Glu/Hydantoin racemase - - - 0.000000000000000000000000000000000000000000000000001475 185.0
YHH3_k127_9277116_0 Protein of unknown function (DUF3570) - - - 1.613e-258 799.0
YHH3_k127_9277116_1 Sulfatase - - - 5.659e-205 640.0
YHH3_k127_9277116_2 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 481.0
YHH3_k127_9277116_3 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002238 255.0
YHH3_k127_9277116_4 - K13292 - - 0.000000000000000000000000149 110.0
YHH3_k127_9284524_0 chemotaxis K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 458.0
YHH3_k127_9284524_1 PFAM VacJ family lipoprotein K04754 - - 0.0000000000000003667 78.0
YHH3_k127_9292004_0 Oxygen tolerance - - - 6.411e-199 633.0
YHH3_k127_9292004_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K11928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002114 546.0
YHH3_k127_9292004_2 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.000006736 51.0
YHH3_k127_9297760_0 acyl-CoA dehydrogenase K20035 - - 3.87e-236 733.0
YHH3_k127_931176_0 Belongs to the DEAD box helicase family - - - 3.424e-230 719.0
YHH3_k127_931176_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007663 522.0
YHH3_k127_931176_10 PFAM Cold-shock protein, DNA-binding K03704 - - 0.000000000000000000000000000000000000001091 147.0
YHH3_k127_931176_2 PFAM methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 395.0
YHH3_k127_931176_3 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 376.0
YHH3_k127_931176_4 lytic transglycosylase K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 327.0
YHH3_k127_931176_5 PFAM peptidase M1, membrane alanine aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 340.0
YHH3_k127_931176_6 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 333.0
YHH3_k127_931176_7 protein conserved in bacteria (DUF2058) K09912 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002978 277.0
YHH3_k127_931176_8 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000006376 226.0
YHH3_k127_931176_9 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000009947 190.0
YHH3_k127_9316984_0 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 - 2.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006879 581.0
YHH3_k127_9316984_1 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 297.0
YHH3_k127_9316984_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001655 287.0
YHH3_k127_9316984_3 integral membrane protein - - - 0.000000000001177 72.0
YHH3_k127_93252_0 belongs to the aldehyde dehydrogenase family K00135,K00141 - 1.2.1.16,1.2.1.20,1.2.1.28,1.2.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 385.0
YHH3_k127_93252_1 Methyl-transferase K00558 GO:0003674,GO:0003824,GO:0003886,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009008,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0032776,GO:0034641,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044728,GO:0046483,GO:0071704,GO:0090116,GO:0090304,GO:0140097,GO:1901360 2.1.1.37 0.000000000000000008223 86.0
YHH3_k127_9330906_0 D-isomer specific 2-hydroxyacid dehydrogenase K03778,K18916 - 1.1.1.28,1.20.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007656 585.0
YHH3_k127_9330906_1 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 298.0
YHH3_k127_9330906_2 Protein of unknown function (DUF2750) - - - 0.0000000000000000000000000000000000000000000000000000000002426 202.0
YHH3_k127_9330906_3 6-phosphogluconate dehydrogenase, NAD-binding K00020,K00042 - 1.1.1.31,1.1.1.60 0.000000000000000000000000000000000003578 138.0
YHH3_k127_9353249_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1044.0
YHH3_k127_9353249_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 341.0
YHH3_k127_9373998_0 basal body rod protein K02390 - - 1.222e-231 721.0
YHH3_k127_9373998_1 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.00000000000000000000000000000000000000000007144 161.0
YHH3_k127_9373998_2 Flagellar basal body rod protein K02391 - - 0.00000000000000000000000000000000000001199 145.0
YHH3_k127_9375439_0 Bacterial periplasmic substrate-binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 559.0
YHH3_k127_9375439_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 422.0
YHH3_k127_9388685_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000634 536.0
YHH3_k127_9388685_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.000000000000000000000000000000000006879 136.0
YHH3_k127_9397873_0 Concanavalin A-like lectin/glucanases superfamily - - - 0.0 1364.0
YHH3_k127_9397873_1 - - - - 0.0 996.0
YHH3_k127_9397873_2 - - - - 2.242e-225 702.0
YHH3_k127_9397873_3 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000928 511.0
YHH3_k127_9397873_4 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 437.0
YHH3_k127_9397873_5 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006168 396.0
YHH3_k127_9397873_6 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 331.0
YHH3_k127_9397873_7 biopolymer transport protein - - - 0.00000000000000000000000000000000000000000000000000000000004093 206.0
YHH3_k127_9403840_0 nuclear chromosome segregation - - - 0.00000000000000000000000001632 122.0
YHH3_k127_9403840_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000005701 84.0
YHH3_k127_9404825_0 TIGRFAM hydrolase, TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 434.0
YHH3_k127_9404825_1 PFAM Type IV pilus assembly PilZ K02676 - - 0.00000000000000000000000000000000000000000000000000000001592 198.0
YHH3_k127_9410649_0 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 449.0
YHH3_k127_9410649_1 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 364.0
YHH3_k127_9410649_2 LysR substrate binding domain - GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 367.0
YHH3_k127_9410649_3 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 364.0
YHH3_k127_9410649_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000673 280.0
YHH3_k127_9410649_5 of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001782 273.0
YHH3_k127_9410950_0 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 569.0
YHH3_k127_9410950_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004359 527.0
YHH3_k127_9410950_2 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 438.0
YHH3_k127_9410950_3 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 307.0
YHH3_k127_9410950_4 This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis K03764 GO:0000096,GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006355,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0019752,GO:0031323,GO:0031326,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0140110,GO:1901564,GO:1901605,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000001 230.0
YHH3_k127_9410950_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.00000000000000000000000000000000000000000000000000001001 189.0
YHH3_k127_9413190_0 PA domain - - - 3.337e-215 686.0
YHH3_k127_9413190_1 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007425 289.0
YHH3_k127_9428944_0 Peptidase inhibitor I9 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009826 412.0
YHH3_k127_9428944_1 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000002761 143.0
YHH3_k127_9437878_0 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000342 244.0
YHH3_k127_9437878_1 Acetyl xylan esterase (AXE1) - - - 0.0000000000000000000000000000000000000000000000000000000000008171 214.0
YHH3_k127_9437878_2 Acetyl xylan esterase (AXE1) - - - 0.000000000000000000000000000000000000000000000000000000001495 202.0
YHH3_k127_9437878_3 regulatory protein AmpE K03807 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000003263 102.0
YHH3_k127_944865_0 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 2.05e-224 700.0
YHH3_k127_944865_1 PFAM ATP dependent DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005275 457.0
YHH3_k127_944865_2 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009262 388.0
YHH3_k127_944865_3 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004942 364.0
YHH3_k127_944865_4 Belongs to the pirin family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 353.0
YHH3_k127_944865_5 of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001349 269.0
YHH3_k127_944865_6 RTX toxins and related Ca2 binding proteins - - - 0.000000000003117 80.0
YHH3_k127_944865_7 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0002087 54.0
YHH3_k127_9452065_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1745.0
YHH3_k127_9452065_1 Putative general bacterial porin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005765 404.0
YHH3_k127_9452065_2 Domain of unknown function (DUF4920) - - - 0.00000000000000000000000000000000000000000000000007167 181.0
YHH3_k127_9452419_0 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.00000000000000000000000000000000000000000000000000000002194 203.0
YHH3_k127_9452419_1 Protein of unknown function (DUF3261) - - - 0.0000000000000000471 88.0
YHH3_k127_9452419_2 Tryptophan halogenase - - - 0.0000000006061 59.0
YHH3_k127_9461725_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1283.0
YHH3_k127_9461725_1 PFAM C4-dicarboxylate anaerobic - - - 3.26e-269 832.0
YHH3_k127_9461725_2 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 - 2.7.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 333.0
YHH3_k127_9488063_0 Belongs to the peptidase S1C family K04771,K04772 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 413.0
YHH3_k127_9488063_1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04691,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009897,GO:0009986,GO:0009987,GO:0010033,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0033554,GO:0035966,GO:0035967,GO:0042221,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051716,GO:0051788,GO:0070011,GO:0070887,GO:0071218,GO:0071310,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 289.0
YHH3_k127_9488300_0 4-alpha-glucanotransferase K00705,K06044 - 2.4.1.25,5.4.99.15 0.0 1159.0
YHH3_k127_9488300_1 argininosuccinate lyase K01755 - 4.3.2.1 2.869e-274 848.0
YHH3_k127_9488300_2 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 8.824e-256 790.0
YHH3_k127_9488300_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 1.944e-196 615.0
YHH3_k127_9488300_4 Y_Y_Y domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009977 569.0
YHH3_k127_9488300_5 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 512.0
YHH3_k127_9488300_6 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930,K22478 GO:0003674,GO:0003824,GO:0003991,GO:0004042,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016407,GO:0016410,GO:0016597,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0033554,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0050896,GO:0051716,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 379.0
YHH3_k127_9488300_7 OmpA-like transmembrane domain K03286 - - 0.000000000000001889 83.0
YHH3_k127_9536477_0 Flagellar rod assembly protein muramidase FlgJ K02395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007971 273.0
YHH3_k127_9536477_1 TIGRFAM Flagellar hook-associated protein, FlgK K02396 - - 0.000000000000000000000000000000000000000000000000000000000000001421 221.0
YHH3_k127_956143_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 501.0
YHH3_k127_956143_1 COG1131 ABC-type multidrug transport system, ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009313 449.0
YHH3_k127_956143_2 COG0842 ABC-type multidrug transport system, permease component K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 409.0
YHH3_k127_956143_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000007415 222.0
YHH3_k127_9564192_0 amidohydrolase - - - 2.314e-315 972.0
YHH3_k127_9582666_0 pfkB family carbohydrate kinase - - - 7.008e-275 846.0
YHH3_k127_9582666_1 proteins, homologs of microcin C7 resistance protein MccF K01297 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009050,GO:0009056,GO:0009254,GO:0009987,GO:0016787,GO:0019538,GO:0030203,GO:0034641,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.4.17.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001669 265.0
YHH3_k127_9586642_0 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 470.0
YHH3_k127_9586642_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004109 393.0
YHH3_k127_9586642_2 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.000000000000000000000000006658 111.0
YHH3_k127_9587134_0 - - - - 0.0 1022.0
YHH3_k127_9587134_1 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.0 1009.0
YHH3_k127_9587134_2 electron transfer flavoprotein, alpha subunit K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 518.0
YHH3_k127_9587134_3 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007424 435.0
YHH3_k127_9587134_4 Low-potential electron donor to a number of redox enzymes K03839 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 354.0
YHH3_k127_9587134_5 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases K03825 GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031248,GO:0031365,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564,GO:1902493,GO:1902494,GO:1990234 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 300.0
YHH3_k127_9587134_6 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 298.0
YHH3_k127_9587134_7 Domain of unknown function (DUF4442) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 296.0
YHH3_k127_9587134_8 Alpha beta hydrolase K01175 - - 0.00000000000000000000000000000000000000000000000000000000000000000009132 233.0
YHH3_k127_9587134_9 CopG domain protein DNA-binding domain protein - GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 0.0000000000000000000000000000000000000000001657 161.0
YHH3_k127_959683_0 Endonuclease Exonuclease phosphatase K07004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007673 466.0
YHH3_k127_959683_1 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.00000000000000000000000000000000000000000000000000002647 188.0
YHH3_k127_959683_2 ABC transporter transmembrane region K06147 - - 0.0000000000000000000000000000000005674 131.0
YHH3_k127_960017_0 flagellar hook-associated protein K02396 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 464.0
YHH3_k127_960017_1 Flagellar rod assembly protein muramidase FlgJ K02395 - - 0.0000000000000000000000001401 111.0
YHH3_k127_960017_2 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.00000000000000000000006392 99.0
YHH3_k127_960017_3 Belongs to the bacterial flagellin family K02397 - - 0.0000000003382 61.0
YHH3_k127_9601071_0 PFAM von Willebrand factor type A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004488 451.0
YHH3_k127_9601071_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000000000000000001161 100.0
YHH3_k127_9602423_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 1.253e-238 745.0
YHH3_k127_9602423_1 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000216 228.0
YHH3_k127_9602423_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000004102 166.0
YHH3_k127_961833_0 - - - - 3.445e-312 972.0
YHH3_k127_961833_1 Iron permease FTR1 K07243 - - 4.903e-217 690.0
YHH3_k127_961833_2 MORN repeat variant - - - 0.0000000000000000000000000000000000197 138.0
YHH3_k127_961833_3 Mediates influx of magnesium ions K03284 - - 0.000000002986 61.0
YHH3_k127_96214_0 PFAM monooxygenase FAD-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 473.0
YHH3_k127_96214_1 Beta-ketoacyl synthase, C-terminal domain K00647 - 2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 424.0
YHH3_k127_96214_2 Protein of unknown function (DUF3261) - - - 0.000000000000000000005792 101.0
YHH3_k127_96214_3 3-hydroxylacyl-(acyl carrier protein) dehydratase - - - 0.0000000000000004873 79.0
YHH3_k127_9648183_0 Amidohydrolase family - - - 4.281e-225 703.0
YHH3_k127_9648183_1 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002279 256.0
YHH3_k127_9648183_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001639 252.0
YHH3_k127_9669133_0 Protein of unknown function (DUF3422) - - - 1.012e-244 761.0
YHH3_k127_9669133_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004253 491.0
YHH3_k127_9669133_2 Putative zinc- or iron-chelating domain - - - 0.00000000000000000000000000000000000000000004735 162.0
YHH3_k127_9671817_0 protein conserved in bacteria K11891 - - 2.408e-218 694.0
YHH3_k127_9671817_1 Type VI secretion system protein DotU K11892 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 433.0
YHH3_k127_9680594_0 Helicase K03722 - 3.6.4.12 9.6e-290 892.0
YHH3_k127_9691853_0 related to penicillin acylase K07116 - 3.5.1.97 8.047e-294 917.0
YHH3_k127_9692772_0 Beta-lactamase K01467,K19100,K19101,K19215,K20319,K20320 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008800,GO:0016787,GO:0016810,GO:0016812,GO:0042597,GO:0044464 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 326.0
YHH3_k127_9694783_0 Na H antiporter K05559 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 521.0
YHH3_k127_9694783_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.000000000000001224 77.0
YHH3_k127_9698635_0 Hydrophobe Amphiphile Efflux-1 (HAE1) K18138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 353.0
YHH3_k127_9698635_1 transcriptional regulator K03577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007544 332.0
YHH3_k127_9699782_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 1.588e-194 609.0
YHH3_k127_9699782_1 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 322.0
YHH3_k127_9709566_0 Protein of unknown function (DUF3300) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000971 582.0
YHH3_k127_9709566_1 Acyltransferase - - - 0.00000000000000000000000000000000000008306 141.0
YHH3_k127_9734720_0 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 0.0 1173.0
YHH3_k127_9734720_1 GntR family transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000001668 233.0
YHH3_k127_9750659_0 COG0366 Glycosidases - - - 0.0 1057.0
YHH3_k127_9750659_1 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000004826 247.0
YHH3_k127_9750659_2 COG0840 Methyl-accepting chemotaxis protein K03406 - - 0.0000000002944 65.0
YHH3_k127_9760887_0 Pseudouridine synthase K06175 - 5.4.99.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 363.0
YHH3_k127_9760887_1 tRNA pseudouridine synthase C - - - 0.000000000000000000000000000000000000001729 150.0
YHH3_k127_9777210_0 TIGRFAM DNA protecting protein DprA K04096 - - 6.914e-199 625.0
YHH3_k127_9777210_1 Topoisomerase DNA binding C4 zinc finger - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007779 353.0
YHH3_k127_9777210_2 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 323.0
YHH3_k127_9777210_3 Belongs to the Smg family K03747 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008238 312.0
YHH3_k127_9777210_4 PFAM Peptidoglycan-binding lysin domain - - - 0.000000000000000000008281 91.0
YHH3_k127_9784985_0 Transcriptional K02529 - - 5.048e-194 611.0
YHH3_k127_9784985_1 MltA-interacting MipA family protein K07274 - - 0.00000000000000000000000000000000000000000000000000000000000000000004624 237.0
YHH3_k127_9784985_2 PFAM MORN variant repeat protein - - - 0.0000000001664 63.0
YHH3_k127_9787030_0 protease with the C-terminal PDZ domain - - - 3.23e-263 822.0
YHH3_k127_9787030_1 COG0720 6-pyruvoyl-tetrahydropterin synthase K00031 - 1.1.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008766 460.0
YHH3_k127_9787030_2 Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length K01716 - 4.2.1.59,5.3.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 354.0
YHH3_k127_9787030_3 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 287.0
YHH3_k127_9787030_4 PFAM thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007212 258.0
YHH3_k127_9787030_5 PFAM Histidine triad (HIT) protein K02503 - - 0.00000000000000000000000000000000000000000000000000000002947 199.0
YHH3_k127_9787030_6 - - - - 0.0000000000000000000000000000000000000000000006735 166.0
YHH3_k127_9787030_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000002926 147.0
YHH3_k127_9787030_8 Protein of unknown function (DUF3466) - - - 0.000000000000000000000000000000000002155 140.0
YHH3_k127_9787030_9 During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes) K03812 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006950,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032055,GO:0032268,GO:0032269,GO:0033554,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043555,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112,GO:2000113 - 0.000000000000000000000000000000004722 128.0
YHH3_k127_9801795_0 fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007895 417.0
YHH3_k127_9801795_1 Domain of unknown function (DUF4287) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009701 310.0
YHH3_k127_9801795_2 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000001364 189.0
YHH3_k127_9801795_3 DNA-binding transcription factor activity - - - 0.0000000000000000000000000004501 117.0
YHH3_k127_9801795_4 Domain of unknown function (DUF4287) - - - 0.000000000000000000000001087 104.0
YHH3_k127_9801795_5 Zinc-binding dehydrogenase - - - 0.0000000000000000000000509 100.0
YHH3_k127_9813052_0 GGDEF domain - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 359.0
YHH3_k127_9817105_0 FtsX-like permease family K02004 - - 1.48e-280 871.0
YHH3_k127_9817105_1 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 361.0
YHH3_k127_9817105_2 PFAM lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 292.0
YHH3_k127_9817105_3 single-stranded-DNA-specific exonuclease recJ K07462 - - 0.0000000000004431 70.0
YHH3_k127_9817105_4 - - - - 0.00000005735 55.0
YHH3_k127_9851548_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 3.794e-261 809.0
YHH3_k127_9851548_1 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 2.917e-218 679.0
YHH3_k127_9851548_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 588.0
YHH3_k127_9864974_0 MacB-like periplasmic core domain K02004 - - 3.067e-228 712.0
YHH3_k127_9864974_1 pfam abc K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 395.0
YHH3_k127_9864974_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000452 357.0
YHH3_k127_9864974_3 Protein of unknown function (DUF3299) K09950 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008853 323.0
YHH3_k127_9864974_4 Protein of unknown function (DUF2796) - - - 0.000000000000000000000000000000001604 129.0
YHH3_k127_9892214_0 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 9.733e-311 961.0
YHH3_k127_9892214_1 Acyltransferase K02348 GO:0003674,GO:0003824,GO:0006464,GO:0006473,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000002479 214.0
YHH3_k127_9910346_0 COG1335 Amidases related to nicotinamidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 393.0
YHH3_k127_9910346_1 Pirin C-terminal cupin domain K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 393.0
YHH3_k127_9910346_2 PFAM aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 283.0
YHH3_k127_9910346_3 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004897 279.0
YHH3_k127_9913641_0 Diguanylate cyclase - - - 9.273e-253 794.0
YHH3_k127_9913641_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000001385 230.0
YHH3_k127_9950958_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 452.0
YHH3_k127_9950958_1 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006566,GO:0006567,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008270,GO:0008652,GO:0008743,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0030145,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046395,GO:0046870,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 1.1.1.103 0.0000000000000000000000000000000000000000000000000000000000000000000004219 237.0
YHH3_k127_995456_0 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 1.665e-291 900.0
YHH3_k127_995456_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005035 373.0
YHH3_k127_9956835_0 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006716 328.0
YHH3_k127_9956835_1 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000003633 197.0
YHH3_k127_9956835_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000006709 91.0
YHH3_k127_9959201_0 PFAM Transglutaminase-like K22452 - 2.3.2.13 0.00000000000000000000000000000000000000000000000002335 186.0
YHH3_k127_9959201_1 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily K03430 - 2.6.1.37 0.0000000000000000000000000001732 114.0
YHH3_k127_9959201_2 Phosphate-starvation-inducible E - - - 0.000000000000002742 78.0
YHH3_k127_9961364_0 Dehydrogenase E1 component K00161 - 1.2.4.1 5.743e-246 762.0
YHH3_k127_9961364_1 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase K00162,K21417 - 1.2.4.1 2.468e-202 631.0
YHH3_k127_9961364_2 Belongs to the AspA AstE family. Succinylglutamate desuccinylase subfamily K05526 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006807,GO:0008150,GO:0008152,GO:0009017,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.96 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 544.0
YHH3_k127_9961364_3 Diguanylate cyclase K20960 - 2.7.7.65 0.000000000000000000000000000000000000000000000006147 173.0
YHH3_k127_996242_0 PFAM Alpha beta hydrolase K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 505.0
YHH3_k127_996242_1 Belongs to the UPF0270 family K09898 - - 0.000000000000000000000000000000004183 129.0
YHH3_k127_9975205_0 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 382.0
YHH3_k127_9975205_1 - - - - 0.00000002945 55.0
YHH3_k127_9979660_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.0 1035.0
YHH3_k127_9979660_1 Arginyl-tRNA synthetase K01887 - 6.1.1.19 4.394e-264 816.0
YHH3_k127_9979660_2 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000000000000001224 146.0
YHH3_k127_9980703_0 fumarate reductase succinate dehydrogenase flavoprotein domain protein K07007 - - 4.994e-212 661.0