Overview

ID MAG04578
Name YHH3_bin.44
Sample SMP0123
Taxonomy
Kingdom Bacteria
Phylum Arandabacterota
Class Arandabacteria
Order Arandabacterales
Family Arandabacteraceae
Genus
Species
Assembly information
Completeness (%) 64.39
Contamination (%) 1.19
GC content (%) 63.0
N50 (bp) 2,235
Genome size (bp) 1,109,653

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1185

Gene name Description KEGG GOs EC E-value Score Sequence
YHH3_k127_10031728_0 Type II secretion system (T2SS), protein E, N-terminal domain K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005268 258.0
YHH3_k127_10031728_1 Competence protein ComEA K02237 - - 0.000000000000002484 78.0
YHH3_k127_10042121_0 DNA recombination K09760 - - 0.00000000000000000000000000000000000000000000008975 183.0
YHH3_k127_10054724_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009330,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140097,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005753 491.0
YHH3_k127_10054724_1 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000001574 100.0
YHH3_k127_10054724_2 Protein of unknown function (DUF721) - - - 0.00000000005405 67.0
YHH3_k127_10058118_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 309.0
YHH3_k127_10058118_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000002737 252.0
YHH3_k127_10058118_2 PFAM Phosphoglycerate mutase K02226,K22305 - 3.1.3.3,3.1.3.73 0.00000000000000000000000000000000000009633 151.0
YHH3_k127_10058118_3 RNase_H superfamily K07502 - - 0.00000000000000000000000000024 120.0
YHH3_k127_10096494_0 SAICAR synthetase K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000003927 219.0
YHH3_k127_10096494_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000002119 138.0
YHH3_k127_10096651_0 Belongs to the PEP-utilizing enzyme family K01007 - 2.7.9.2 2.87e-322 1009.0
YHH3_k127_10096651_1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 9.1e-201 641.0
YHH3_k127_10096651_2 glutamate dehydrogenase [NAD(P)+] activity K00260,K00261,K00262 GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.2,1.4.1.3,1.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000001725 254.0
YHH3_k127_10137012_0 Fibronectin type 3 domain - - - 0.0000000002601 72.0
YHH3_k127_10160270_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 576.0
YHH3_k127_10160270_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.0000000000000000000000000000000000000001762 151.0
YHH3_k127_10160270_2 Permease YjgP YjgQ K11720 - - 0.0000000000000000000000000000000004234 141.0
YHH3_k127_1020118_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000005154 164.0
YHH3_k127_1020118_1 repeat-containing protein - - - 0.0000378 56.0
YHH3_k127_10273561_0 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.000000002123 70.0
YHH3_k127_10284449_0 Involved in DNA repair and RecF pathway recombination K03584 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000008359 146.0
YHH3_k127_10284449_1 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000447 67.0
YHH3_k127_10284449_2 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000006336 59.0
YHH3_k127_10337212_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 310.0
YHH3_k127_10346055_0 Tetratricopeptide repeat - - - 0.000000000000000004983 94.0
YHH3_k127_10346055_1 Lamin Tail Domain - - - 0.0000000007474 66.0
YHH3_k127_1035062_0 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000000000000000000000000000000009906 201.0
YHH3_k127_1035062_1 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000000000000000000000000000003475 195.0
YHH3_k127_10352177_0 DNA photolyase K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 339.0
YHH3_k127_10352177_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008988 282.0
YHH3_k127_10352177_2 Ferritin-like domain K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000008427 202.0
YHH3_k127_10352177_3 acetyltransferase - - - 0.0001812 47.0
YHH3_k127_10368458_0 alginic acid biosynthetic process - - - 0.00000000000000000000000000000004244 144.0
YHH3_k127_10414219_0 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000008962 247.0
YHH3_k127_10414219_1 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00172 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000009222 235.0
YHH3_k127_10414219_2 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000104 126.0
YHH3_k127_10414219_3 TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, delta subunit K00171 - 1.2.7.1 0.000000000000000000000000000006685 128.0
YHH3_k127_10414219_4 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00169 - 1.2.7.1 0.0000000000000000000001368 106.0
YHH3_k127_10420129_0 - - - - 0.00000000000751 70.0
YHH3_k127_10420129_1 Ketosteroid isomerase-related protein - - - 0.000000009352 64.0
YHH3_k127_10435287_0 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000002955 180.0
YHH3_k127_1048062_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006625 276.0
YHH3_k127_1048062_1 Belongs to the SEDS family K03588 - - 0.00000000000000000000000005882 114.0
YHH3_k127_10494331_0 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000000000004019 178.0
YHH3_k127_10494331_1 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.000000000011 67.0
YHH3_k127_10494331_2 Carbohydrate family 9 binding domain-like - - - 0.00000007623 61.0
YHH3_k127_10593934_0 dTDP-4-dehydrorhamnose reductase K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000001667 189.0
YHH3_k127_10593934_1 - - - - 0.000000000000003727 79.0
YHH3_k127_10646814_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 4.828e-225 714.0
YHH3_k127_10648272_0 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004236 281.0
YHH3_k127_10648272_1 Biotin carboxylase K01959,K01961 - 6.3.4.14,6.4.1.1,6.4.1.2 0.000000000000000000000000000000000000000000000000009286 181.0
YHH3_k127_10670019_0 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005832 362.0
YHH3_k127_10693196_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 411.0
YHH3_k127_10693196_1 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000005216 231.0
YHH3_k127_10693196_2 MreB/Mbl protein K03569 - - 0.000000000000000000000000000000000000000000002627 173.0
YHH3_k127_10723007_0 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 302.0
YHH3_k127_10723007_1 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009893 252.0
YHH3_k127_10723007_2 - - - - 0.000000000000000000000000000000000000000000000000000001679 198.0
YHH3_k127_10723007_3 - - - - 0.00000000000000000000000000000000000000000000000004561 185.0
YHH3_k127_10723007_4 Zincin-like metallopeptidase K00930 - 2.7.2.8 0.00000000000000000000000003489 111.0
YHH3_k127_1073656_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005505 386.0
YHH3_k127_10741309_0 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000002191 132.0
YHH3_k127_10741309_1 DNA-binding transcriptional activator of the SARP family - - - 0.0005938 52.0
YHH3_k127_10770994_0 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000004734 220.0
YHH3_k127_10807952_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 453.0
YHH3_k127_10815491_0 CarboxypepD_reg-like domain - - - 0.0004729 53.0
YHH3_k127_10846686_0 Histidine kinase - - - 0.00000000000000000001387 106.0
YHH3_k127_10883972_0 PFAM transferase hexapeptide repeat containing protein K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000209 216.0
YHH3_k127_10883972_1 peptidyl-tyrosine sulfation - - - 0.000000000007864 73.0
YHH3_k127_10904927_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 9.601e-215 681.0
YHH3_k127_10905874_0 Cytochrome D1 heme domain - - - 0.000000000000000007854 96.0
YHH3_k127_10916075_0 PAS domain - - - 0.00001338 58.0
YHH3_k127_10925953_0 - - - - 0.000000000000000000000000000000001338 146.0
YHH3_k127_10925953_1 Large extracellular alpha-helical protein - - - 0.00000000000001192 87.0
YHH3_k127_10935900_0 zinc ion binding K06204 - - 0.000000000000002581 81.0
YHH3_k127_10935900_1 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000002205 70.0
YHH3_k127_10943065_0 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000005478 261.0
YHH3_k127_10943065_1 amine dehydrogenase activity - - - 0.00000000004918 76.0
YHH3_k127_10943065_2 RHS Repeat - - - 0.00000000006486 76.0
YHH3_k127_10943065_3 domain protein K20276 - - 0.000000000149 71.0
YHH3_k127_10948494_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000001218 67.0
YHH3_k127_1099893_0 UDP-N-acetylmuramate-L-alanine ligase activity K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 562.0
YHH3_k127_1099893_1 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000006955 113.0
YHH3_k127_1099893_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000007685 65.0
YHH3_k127_11051852_0 Belongs to the ClpA ClpB family K03696 GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 593.0
YHH3_k127_11051852_1 Surface antigen K07277 GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.00000000000000000000000000000000000000000000000000000000000000000000000001288 275.0
YHH3_k127_11133524_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000003293 117.0
YHH3_k127_11169747_0 Major facilitator superfamily K08222 - - 0.0005105 52.0
YHH3_k127_11182288_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000619 478.0
YHH3_k127_11193778_0 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000007954 179.0
YHH3_k127_11193778_1 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000002251 101.0
YHH3_k127_11215365_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 312.0
YHH3_k127_11215365_1 glycyl-tRNA aminoacylation K01878,K14164 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016874,GO:0016875,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0140098,GO:0140101 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004798 296.0
YHH3_k127_11229443_0 Catalyzes the conversion of 1-proline-5-carboxylate dehydrogenase to L-glutamate K00294 - 1.2.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 389.0
YHH3_k127_11231739_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 6.837e-245 779.0
YHH3_k127_11231739_1 Belongs to the Smg family K03747 - - 0.0000000000000000000706 96.0
YHH3_k127_11231739_2 PFAM SEC-C motif K09858 - - 0.0000001892 52.0
YHH3_k127_11303155_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019904,GO:0022607,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043335,GO:0043933,GO:0044085,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0065003,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 566.0
YHH3_k127_11303155_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000001446 78.0
YHH3_k127_11303155_2 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000002856 58.0
YHH3_k127_11307593_0 DNA polymerase K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 2.612e-298 942.0
YHH3_k127_11307593_1 Exopolysaccharide biosynthesis protein YbjH - - - 0.00000000000000000000000000000000000003703 154.0
YHH3_k127_11310481_0 PFAM EamA-like transporter family - - - 0.0008684 44.0
YHH3_k127_11326778_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009687 383.0
YHH3_k127_11326778_1 Protein of unknown function (DUF512) - - - 0.000000001039 63.0
YHH3_k127_11326778_2 Belongs to the PlsY family - - - 0.00003331 46.0
YHH3_k127_11337524_0 alginic acid biosynthetic process - - - 0.00006105 54.0
YHH3_k127_11337524_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000134 47.0
YHH3_k127_11395811_0 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009445 291.0
YHH3_k127_11395811_1 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02372,K02535,K13599,K16363 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0019171 3.5.1.108,4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 286.0
YHH3_k127_11395811_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000002834 112.0
YHH3_k127_11404026_0 smart pdz dhr glgf K04771,K04772 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 306.0
YHH3_k127_11406103_0 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000001704 151.0
YHH3_k127_11406103_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000001525 128.0
YHH3_k127_11406103_2 - - - - 0.000000001173 62.0
YHH3_k127_11413414_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000007998 80.0
YHH3_k127_11413414_1 extracellular matrix structural constituent - - - 0.000000003187 69.0
YHH3_k127_11413414_2 domain protein K07004,K09955,K20276 - - 0.000001294 61.0
YHH3_k127_11424865_0 TIGRFAM glycyl-radical enzyme activating protein family K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005761 320.0
YHH3_k127_11424865_1 Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde K00656,K20038 - 2.3.1.54,4.3.99.4 0.00000000000000000000000000000000000000000000000000000000000000000000000005372 258.0
YHH3_k127_11428673_0 Methionine synthase B12-binding module cap domain protein K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000001165 235.0
YHH3_k127_11428673_1 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000003236 184.0
YHH3_k127_11428673_2 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000006322 119.0
YHH3_k127_11456287_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.0000000000000000000000000000000000000000000004603 179.0
YHH3_k127_11456287_1 ATP-dependent DNA helicase K03657 GO:0000018,GO:0000166,GO:0000287,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0009892,GO:0009987,GO:0010605,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030312,GO:0030554,GO:0031323,GO:0031324,GO:0032392,GO:0032508,GO:0032552,GO:0032554,GO:0032558,GO:0032564,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0036094,GO:0040007,GO:0042623,GO:0043138,GO:0043140,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0045910,GO:0045934,GO:0046483,GO:0046872,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051276,GO:0051716,GO:0060255,GO:0060542,GO:0060543,GO:0065007,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.0000000000000000000000000000000000000002053 152.0
YHH3_k127_11488997_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000001123 231.0
YHH3_k127_11488997_1 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0030312,GO:0032984,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000001633 223.0
YHH3_k127_11488997_2 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000002557 76.0
YHH3_k127_11488997_3 transferase activity, transferring alkyl or aryl (other than methyl) groups K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.000000000000006771 77.0
YHH3_k127_11523802_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 388.0
YHH3_k127_11523802_1 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001431 241.0
YHH3_k127_11524087_0 Malic enzyme, NAD binding domain K00027,K00029 - 1.1.1.38,1.1.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000002448 250.0
YHH3_k127_11524087_1 polysaccharide catabolic process K01179,K01218 - 3.2.1.4,3.2.1.78 0.00000361 53.0
YHH3_k127_11524087_2 - - - - 0.00002662 48.0
YHH3_k127_11538813_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1086.0
YHH3_k127_11538813_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000207 172.0
YHH3_k127_11538813_2 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000005003 171.0
YHH3_k127_11569913_0 - - - - 0.0000000000000003307 91.0
YHH3_k127_11575318_0 Dienelactone hydrolase family - - - 0.00000000000000000002384 104.0
YHH3_k127_11577967_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007536 372.0
YHH3_k127_11603184_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 376.0
YHH3_k127_11603184_1 Domain of unknown function (DUF4438) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009825 337.0
YHH3_k127_11603184_2 mRNA catabolic process K06950,K09163 - - 0.00000000000000000000000000000000000000000001891 168.0
YHH3_k127_11632329_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004672 298.0
YHH3_k127_11632329_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000000000000001328 93.0
YHH3_k127_11714188_0 amino acid activation for nonribosomal peptide biosynthetic process K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000001039 184.0
YHH3_k127_11727333_0 Binding-protein-dependent transport system inner membrane component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 296.0
YHH3_k127_11727333_1 binding-protein-dependent transport systems inner membrane component K02025,K15771 - - 0.00000000000000000000000000000000000000000000000000000000000000000009565 235.0
YHH3_k127_11728080_0 May be involved in recombinational repair of damaged DNA K03631,K13582 GO:0000724,GO:0000725,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009295,GO:0009314,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0030312,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071944,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 366.0
YHH3_k127_11728080_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000001154 243.0
YHH3_k127_11728080_2 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K07138 - - 0.00000000000000000000000000000000000000004675 156.0
YHH3_k127_11735122_0 Penicillin-binding protein 1A K05366 GO:0003674,GO:0005488,GO:0005515,GO:0042802 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000001559 189.0
YHH3_k127_11735122_1 Bacterial Ig-like domain 2 - - - 0.0009967 46.0
YHH3_k127_11758232_0 CoA enzyme activase uncharacterised domain (DUF2229) - - - 1.237e-294 923.0
YHH3_k127_11760490_0 LemA family K03744 - - 0.0000000000000000000000000000000000000000006108 164.0
YHH3_k127_11760490_1 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000003149 143.0
YHH3_k127_11760490_2 TPM domain K06872 - - 0.0000000000000000000000000003242 124.0
YHH3_k127_11769624_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005895 580.0
YHH3_k127_11769624_1 Amino acid kinase family K00926 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008804,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019546,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.7.2.2 0.00000000000000000000000000000000000000000000004745 173.0
YHH3_k127_11783340_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044464,GO:0051258,GO:0051301,GO:0065003,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000606 382.0
YHH3_k127_11783340_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000001998 209.0
YHH3_k127_11785595_0 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 511.0
YHH3_k127_11785595_1 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009984 473.0
YHH3_k127_11785595_2 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 443.0
YHH3_k127_11785595_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 392.0
YHH3_k127_11785595_4 Binding-protein-dependent transport system inner membrane component K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 370.0
YHH3_k127_11785595_5 Binding-protein-dependent transport system inner membrane component K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 311.0
YHH3_k127_11785595_6 PFAM response regulator receiver K07657,K07663 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002006 283.0
YHH3_k127_11785595_7 negative regulation of phosphate transmembrane transport K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0060255,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.00000000000000000000000000000000000000000000000000000000000004356 220.0
YHH3_k127_11788701_0 nucleotidyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000007619 214.0
YHH3_k127_11803284_0 TIGRFAM methylmalonyl-CoA mutase N-terminal domain K01848 - 5.4.99.2 3.857e-248 777.0
YHH3_k127_11803284_1 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 479.0
YHH3_k127_11803284_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 348.0
YHH3_k127_11803284_3 B12 binding domain K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000001091 200.0
YHH3_k127_11809769_0 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000000000000000003491 207.0
YHH3_k127_11809769_1 metallophosphoesterase K07096 - - 0.00000000000000000000000000000000000000003343 157.0
YHH3_k127_11814349_0 Sporulation initiation inhibitor protein Soj K03496 - - 0.00000000000000000000000000000000000000000000000000000000000244 224.0
YHH3_k127_11814349_1 Conserved protein domain typically associated with flavoprotein oxygenases DIM6 NTAB family - - - 0.0000000000000000000000006005 111.0
YHH3_k127_11900013_0 Peptidase M1, membrane alanine aminopeptidase K01269 - - 0.00001146 59.0
YHH3_k127_11910826_0 - - - - 0.0000000000000000007465 92.0
YHH3_k127_11910826_1 Immune inhibitor A peptidase M6 K09607 - - 0.000000000000125 83.0
YHH3_k127_1193338_0 Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000001322 205.0
YHH3_k127_1193338_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000001184 143.0
YHH3_k127_1193338_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000002469 136.0
YHH3_k127_1193338_3 - - - - 0.0000000000000000000000000001866 122.0
YHH3_k127_11937589_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000008378 151.0
YHH3_k127_11937589_1 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000002659 136.0
YHH3_k127_11937589_2 Cell division protein FtsQ K03589 - - 0.000005903 57.0
YHH3_k127_11973103_0 TGS domain K06944 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001136 285.0
YHH3_k127_11973103_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000008714 230.0
YHH3_k127_11979403_0 NADH dehydrogenase K00335 - 1.6.5.3 1.545e-228 718.0
YHH3_k127_11979403_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0000000000000000000000000000000000000000000000000000000000001446 217.0
YHH3_k127_11980035_0 PFAM Mg2 transporter protein CorA family protein K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 305.0
YHH3_k127_11980035_1 Domain of unknown function (DUF1732) K03316 - - 0.000000000000000000000000000000000000000000000000000000000000000000002477 245.0
YHH3_k127_11980035_2 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000002118 192.0
YHH3_k127_11980035_3 Domain of unknown function (DUF370) K09777 - - 0.0000000000000000000001708 107.0
YHH3_k127_11990178_0 lipopolysaccharide transport protein B ATP-binding component of ABC superfamily K01990,K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 321.0
YHH3_k127_11990178_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000001479 153.0
YHH3_k127_11990178_2 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000002004 150.0
YHH3_k127_11990178_3 Lipopolysaccharide-assembly, LptC-related - - - 0.00000002507 64.0
YHH3_k127_11998917_0 acetyl-CoA hydrolase transferase - - - 1.417e-212 677.0
YHH3_k127_11998917_1 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 1.159e-197 642.0
YHH3_k127_11998917_2 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001146 255.0
YHH3_k127_11998917_3 Radical SAM superfamily - - - 0.0000000000000000000000000000000000000000000000000000001215 209.0
YHH3_k127_11998917_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000003448 173.0
YHH3_k127_11998917_5 Uncharacterized BCR, YaiI/YqxD family COG1671 K09768 - - 0.000000000000000000000000000000000005501 143.0
YHH3_k127_11998917_6 Domain of unknown function (DUF4910) - - - 0.00000000000000000000000003288 120.0
YHH3_k127_11998917_7 3-demethylubiquinone-9 3-O-methyltransferase activity K16328 - 2.7.1.83 0.000000000000002445 77.0
YHH3_k127_12002818_0 Asparaginyl-tRNA synthetase K01893 GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 317.0
YHH3_k127_12002818_1 Na+/Pi-cotransporter K03324 - - 0.00000000000000000000000000000000000000000000000000000000355 210.0
YHH3_k127_12084870_0 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 418.0
YHH3_k127_12084870_1 5'-deoxynucleotidase activity K07023 - - 0.00000000000000000000000000000000000000000000000000000000000000002322 231.0
YHH3_k127_12084870_2 membrane K08978 - - 0.0000000000000000000000004053 110.0
YHH3_k127_12142250_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 6.239e-205 650.0
YHH3_k127_12142250_1 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000005376 225.0
YHH3_k127_12142250_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000008634 165.0
YHH3_k127_12145305_0 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000006709 222.0
YHH3_k127_1215150_0 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000512 136.0
YHH3_k127_12174191_0 MutL protein K00854 - 2.7.1.17 7.006e-264 824.0
YHH3_k127_12174191_1 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000002246 138.0
YHH3_k127_12174191_2 - - - - 0.000004617 50.0
YHH3_k127_12177035_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008305 307.0
YHH3_k127_12177035_1 PFAM sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004973 279.0
YHH3_k127_12183174_0 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000002964 251.0
YHH3_k127_12183174_1 Belongs to the peptidase C1 family K01365,K01371 GO:0000323,GO:0001503,GO:0001894,GO:0001957,GO:0001968,GO:0003674,GO:0003824,GO:0004175,GO:0004197,GO:0004252,GO:0005488,GO:0005515,GO:0005518,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005764,GO:0005768,GO:0005773,GO:0005775,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008236,GO:0009056,GO:0009057,GO:0009987,GO:0012505,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022411,GO:0022617,GO:0030163,GO:0030198,GO:0030574,GO:0030856,GO:0031410,GO:0031904,GO:0031974,GO:0031981,GO:0031982,GO:0032501,GO:0032963,GO:0036019,GO:0036021,GO:0036072,GO:0042592,GO:0043062,GO:0043170,GO:0043202,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043394,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045453,GO:0045595,GO:0045604,GO:0045616,GO:0045682,GO:0046849,GO:0048771,GO:0048871,GO:0050789,GO:0050793,GO:0050794,GO:0051239,GO:0051603,GO:0060249,GO:0065007,GO:0065008,GO:0070011,GO:0070013,GO:0071704,GO:0071840,GO:0097367,GO:0097708,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:2000026 3.4.22.15,3.4.22.38 0.000000000000000000000000008641 127.0
YHH3_k127_12185353_0 Tricorn protease C1 domain K08676 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 394.0
YHH3_k127_12231481_0 4Fe-4S dicluster domain K11473 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009094 302.0
YHH3_k127_12241503_0 Thiamine biosynthesis protein (ThiI) - - - 0.000000000000000000000000000000000000000000000000000000000000000000005233 241.0
YHH3_k127_12241503_1 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.000000000000000000000000000000000006029 140.0
YHH3_k127_12303165_0 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000004965 238.0
YHH3_k127_12303165_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000001607 220.0
YHH3_k127_12303165_2 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000000000000000000000000000000001326 158.0
YHH3_k127_12303165_3 MraZ protein, putative antitoxin-like K03925 - - 0.0000000000000000000187 97.0
YHH3_k127_12308780_0 PFAM Peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001259 286.0
YHH3_k127_12308780_1 nucleotidyltransferase activity - - - 0.0009594 44.0
YHH3_k127_12353259_0 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007107 555.0
YHH3_k127_12353259_1 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.00000000000000000000000000000000000000000000000000000000001547 213.0
YHH3_k127_12353259_2 DGC domain - - - 0.000000000000000000000000000000000000000001567 163.0
YHH3_k127_12353259_3 redox-active disulfide protein 2 - - - 0.000000000000000000000000001173 113.0
YHH3_k127_12353259_4 PFAM Thioredoxin K03671 - - 0.000000000000000000000000001772 119.0
YHH3_k127_12353259_5 DNA-binding transcription factor activity K03655,K03892 - 3.6.4.12 0.0000000000000000000003725 99.0
YHH3_k127_12353259_6 diguanylate cyclase - - - 0.0007079 51.0
YHH3_k127_12358360_0 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000006456 225.0
YHH3_k127_12358360_1 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 - 3.1.3.18 0.00000000000007671 80.0
YHH3_k127_12366440_0 serine-type peptidase activity K01303 - 3.4.19.1 1.002e-262 823.0
YHH3_k127_12366440_1 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000006389 128.0
YHH3_k127_12366440_2 Belongs to the glycosyl hydrolase 57 family - - - 0.0000000000000001123 87.0
YHH3_k127_12368398_0 Fe-S oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004953 323.0
YHH3_k127_12368398_1 electron transfer flavoprotein, alpha subunit K03522,K22432 - 1.3.1.108 0.0000000000000000000000000000000000001405 142.0
YHH3_k127_12405905_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000004898 270.0
YHH3_k127_12405905_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000007463 173.0
YHH3_k127_12408655_0 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 559.0
YHH3_k127_12448973_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 406.0
YHH3_k127_12453698_0 FAD dependent oxidoreductase K00205,K00362,K02573,K03518,K05927,K07302 - 1.12.5.1,1.2.5.3,1.3.99.16,1.7.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 619.0
YHH3_k127_12466035_0 Two component, sigma54 specific, transcriptional regulator, Fis family K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 292.0
YHH3_k127_12466035_1 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein K04768 - - 0.00000000005432 64.0
YHH3_k127_12466035_2 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000824 64.0
YHH3_k127_1247354_0 D,D-heptose 1,7-bisphosphate phosphatase K02841,K02843,K02849,K03271,K03272,K03273 - 2.7.1.167,2.7.7.70,3.1.3.82,3.1.3.83,5.3.1.28 0.00000000004059 75.0
YHH3_k127_12478904_0 Polymer-forming cytoskeletal - - - 0.000000000000003195 88.0
YHH3_k127_12479558_0 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005173 432.0
YHH3_k127_12481810_0 PFAM Zinc carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 516.0
YHH3_k127_12481810_1 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000001344 89.0
YHH3_k127_12481810_2 protein secretion K20276 - - 0.0000000000022 79.0
YHH3_k127_12481810_3 Peptidase family C25 - - - 0.000001242 61.0
YHH3_k127_12549245_0 CobQ/CobB/MinD/ParA nucleotide binding domain K08252 - 2.7.10.1 0.0000000000000000000000008682 113.0
YHH3_k127_12549245_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000003183 85.0
YHH3_k127_12549245_2 protein involved in exopolysaccharide biosynthesis K16554 - - 0.000000000009199 76.0
YHH3_k127_12571024_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0000988,GO:0000989,GO:0003674,GO:0003756,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006457,GO:0006458,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010556,GO:0015035,GO:0015036,GO:0016020,GO:0016032,GO:0016043,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0016989,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031326,GO:0032991,GO:0034641,GO:0034645,GO:0042026,GO:0043167,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051704,GO:0055114,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0140096,GO:0140110,GO:1901360,GO:1901576,GO:1903506,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000006856 208.0
YHH3_k127_12571024_1 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000007905 99.0
YHH3_k127_12606506_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 465.0
YHH3_k127_12606506_1 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 448.0
YHH3_k127_12606506_2 Glycosyltransferase like family 2 - - - 0.000000000000000000000009764 109.0
YHH3_k127_12650891_0 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530,K05788 - - 0.0000000000000000000001661 102.0
YHH3_k127_12650891_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.000004001 54.0
YHH3_k127_12661542_0 domain, Protein - - - 0.0000000000000000000001482 109.0
YHH3_k127_12686732_0 PFAM glycoside hydrolase, family 13 domain protein - - - 0.000000000000001375 91.0
YHH3_k127_12686732_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000009571 75.0
YHH3_k127_12714919_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 474.0
YHH3_k127_12714919_1 - - - - 0.000000000000000000000000000000000000000000000000000000009162 211.0
YHH3_k127_12714919_2 peptidase activity, acting on L-amino acid peptides - - - 0.00005736 46.0
YHH3_k127_12726395_0 Thiamine-binding protein - - - 0.000000000000000000000001518 105.0
YHH3_k127_12726395_1 COG4970 Tfp pilus assembly protein FimT K08084 - - 0.00004764 52.0
YHH3_k127_12726395_2 Type IV Pilus-assembly protein W K02672 - - 0.0002737 51.0
YHH3_k127_12726395_3 type IV pilus modification protein PilV K02671 - - 0.0005251 48.0
YHH3_k127_12732138_0 Glycogen debranching enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003223 392.0
YHH3_k127_12772343_0 phosphate ion binding K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000528 414.0
YHH3_k127_12772343_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001509 258.0
YHH3_k127_12772343_2 Transcriptional regulator - - - 0.000000000000000000000000000000000000001185 154.0
YHH3_k127_12789089_0 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009869 360.0
YHH3_k127_12789089_1 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000001699 243.0
YHH3_k127_12789089_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000003362 193.0
YHH3_k127_12789089_3 DegT/DnrJ/EryC1/StrS aminotransferase family K00812 - 2.6.1.1 0.00000000000000000000001876 101.0
YHH3_k127_12789089_4 B12 binding domain - - - 0.00000000000000000007816 102.0
YHH3_k127_12809491_0 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003105 327.0
YHH3_k127_12809491_1 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000008058 117.0
YHH3_k127_12809491_2 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00176 - 1.2.7.3 0.000000000000000001408 87.0
YHH3_k127_12829507_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000226 263.0
YHH3_k127_12829507_1 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000005944 85.0
YHH3_k127_12829507_2 Dehydrogenase K03519 - 1.2.5.3 0.000001061 57.0
YHH3_k127_1284691_0 - - - - 0.00000596 58.0
YHH3_k127_12881758_0 Formiminotransferase-cyclodeaminase K00603,K01746,K13990 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009749 394.0
YHH3_k127_12881758_1 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.00000000000000000000000000000005439 129.0
YHH3_k127_1300879_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 522.0
YHH3_k127_1300879_1 lactate metabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 516.0
YHH3_k127_1300879_2 - - - - 0.00000001143 61.0
YHH3_k127_1300879_3 nitrate reductase activity - - - 0.000003965 49.0
YHH3_k127_1302508_0 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 481.0
YHH3_k127_1302508_1 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008635 280.0
YHH3_k127_1302508_2 Restriction endonuclease BglII - - - 0.000000000000000000000006479 101.0
YHH3_k127_1302508_3 protein targeting - - - 0.00000000000000000000001395 116.0
YHH3_k127_1315240_0 type II secretion system K02653 - - 0.0000000000000000000000000000000006096 132.0
YHH3_k127_1315240_1 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding - - - 0.00000000000000000000000167 119.0
YHH3_k127_1345277_0 Ferritin-like domain K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005491 319.0
YHH3_k127_1345277_1 Conserved repeat domain - - - 0.0003687 52.0
YHH3_k127_1376500_0 PFAM outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000001728 173.0
YHH3_k127_1394691_0 Fis Family K02584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008743 310.0
YHH3_k127_1410552_0 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000000001005 171.0
YHH3_k127_1410552_1 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000005005 164.0
YHH3_k127_1410552_2 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000003116 160.0
YHH3_k127_1410552_3 peptidylprolyl isomerase K03769,K07533 - 5.2.1.8 0.00000000000000000000000000000001372 141.0
YHH3_k127_1410552_4 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000001453 95.0
YHH3_k127_145573_0 citrate CoA-transferase activity K01643 - 2.8.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007958 537.0
YHH3_k127_1507308_0 Belongs to the peptidase S8 family K08651 - 3.4.21.66 0.0000000000000000001522 104.0
YHH3_k127_1518233_0 PFAM carboxyl transferase K01615 - 4.1.1.70 1.843e-240 757.0
YHH3_k127_1518233_1 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009388 357.0
YHH3_k127_1540443_0 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006267 282.0
YHH3_k127_1540443_1 peptidase activity, acting on L-amino acid peptides K07752 - 3.4.17.22 0.0003443 44.0
YHH3_k127_1550431_0 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009599 436.0
YHH3_k127_1550431_1 Protein of unknown function (DUF1116) K02381 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007603 354.0
YHH3_k127_1567541_0 domain protein - - - 0.000000000000000000000000000002762 139.0
YHH3_k127_1567541_1 Tetratricopeptide repeat - - - 0.000443 52.0
YHH3_k127_162941_0 amine dehydrogenase activity - - - 6.151e-233 752.0
YHH3_k127_162941_1 stress-induced mitochondrial fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004786 282.0
YHH3_k127_162941_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000002275 119.0
YHH3_k127_162941_3 anti-sigma regulatory factor, serine threonine protein kinase K04757 - 2.7.11.1 0.0000000000000464 78.0
YHH3_k127_162941_4 STAS domain K04749 - - 0.00000008049 58.0
YHH3_k127_1646670_0 Evidence 5 No homology to any previously reported sequences K07004 - - 0.000000000000000000000000000000000000000000000000000001981 207.0
YHH3_k127_1646670_1 Phosphoesterase, PA-phosphatase related K01096,K19302 - 3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.000000000000000000000002727 110.0
YHH3_k127_1646670_2 guanyl-nucleotide exchange factor activity K01179,K03929,K09612,K12287,K19701,K19702 GO:0003674,GO:0003824,GO:0004177,GO:0005575,GO:0005623,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0036211,GO:0042597,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.2.1.4,3.4.11.10,3.4.11.24,3.4.11.6 0.00000000000008958 83.0
YHH3_k127_1682346_0 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 308.0
YHH3_k127_1696433_0 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 395.0
YHH3_k127_1696433_1 PFAM Orn DAP Arg decarboxylase 2 K01581 - 4.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007 383.0
YHH3_k127_1696433_2 Hep Hag repeat protein - - - 0.00000000000000002082 96.0
YHH3_k127_1706243_0 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000006691 229.0
YHH3_k127_1706243_1 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K00627,K01571,K02160 - 2.3.1.12,4.1.1.3 0.0000000000000000000000000000000000001602 148.0
YHH3_k127_1706243_2 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000001803 144.0
YHH3_k127_1706243_3 PFAM peptidase M24 K01262,K01271 - 3.4.11.9,3.4.13.9 0.000000000000000000000000000004779 120.0
YHH3_k127_1738756_0 PSP1 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002544 259.0
YHH3_k127_1738756_1 PFAM Peptidase M23 K21471 - - 0.000000000000000000000000000000000000000001719 170.0
YHH3_k127_1753337_0 PFAM peptidase M16 domain protein K07263 - - 0.000000000000000000000004129 112.0
YHH3_k127_1758205_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 314.0
YHH3_k127_1758205_1 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000001721 81.0
YHH3_k127_1774194_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 511.0
YHH3_k127_1774194_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.0000000000000000000000000000000000000000000000002024 183.0
YHH3_k127_177549_0 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000246 93.0
YHH3_k127_1819826_0 Histidine ammonia-lyase K01745 - 4.3.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 471.0
YHH3_k127_1824655_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.0000000000000000000000000000000000000000000001859 174.0
YHH3_k127_1824655_1 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000000001865 133.0
YHH3_k127_183377_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 301.0
YHH3_k127_183377_1 Nucleotidyl transferase K00975 - 2.7.7.27 0.0000000000000000000000000000000000000001367 156.0
YHH3_k127_1857498_0 elongation factor G K02355 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0030312,GO:0044237,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000613 606.0
YHH3_k127_1857498_1 PFAM Xylose isomerase domain protein TIM barrel - - - 0.0003777 48.0
YHH3_k127_1863155_0 PA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002101 239.0
YHH3_k127_1920207_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000007953 235.0
YHH3_k127_1920207_1 Ribosomal RNA small subunit methyltransferase G K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0002039 47.0
YHH3_k127_1942110_0 Domain of unknown function (DUF4139) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009802 388.0
YHH3_k127_1942110_1 protein conserved in bacteria K15539 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.000000005542 65.0
YHH3_k127_1957375_0 mismatched DNA binding K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000001192 189.0
YHH3_k127_1957375_1 lipopolysaccharide metabolic process K07502,K08309,K19804,K21572 - - 0.0000000000000000000000000000000000000000000000003027 184.0
YHH3_k127_1975213_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K02887,K03628 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 544.0
YHH3_k127_1975213_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 422.0
YHH3_k127_1975213_2 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00000000000000000000000000000000000000000000000000000000000000000007715 241.0
YHH3_k127_1975213_3 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.000000000000000000000000000000744 127.0
YHH3_k127_1975213_4 50S ribosomal protein L31 K02909 - - 0.0000000000000000000000000001485 115.0
YHH3_k127_1985400_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006761 511.0
YHH3_k127_1985400_1 Mut7-C ubiquitin K09122 - - 0.00000001682 57.0
YHH3_k127_2002896_0 Endoribonuclease that initiates mRNA decay K18682 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 622.0
YHH3_k127_2002896_1 YmdB-like protein K09769 - - 0.0000000000000000000000000000000000000000000000009806 177.0
YHH3_k127_2002896_2 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.0000000000000000000003298 100.0
YHH3_k127_2002896_3 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000007848 70.0
YHH3_k127_2027813_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004429 535.0
YHH3_k127_2057055_0 - - - - 0.00000000000000000000007771 114.0
YHH3_k127_2057055_1 Hep Hag repeat protein K01406,K21449 - 3.4.24.40 0.0000000000007772 81.0
YHH3_k127_2057055_2 nucleotide catabolic process K05996 - 3.4.17.18 0.00000000001095 78.0
YHH3_k127_2057055_3 Predicted periplasmic protein (DUF2271) - - - 0.000000926 60.0
YHH3_k127_2057055_4 Tetratricopeptide repeat - - - 0.000002243 57.0
YHH3_k127_2057055_5 Subtilase family K13277 GO:0005575,GO:0005576 - 0.0000148 58.0
YHH3_k127_2077502_0 Dihydroorotate dehydrogenase K17723 - 1.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006097 377.0
YHH3_k127_2101535_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003512 431.0
YHH3_k127_2168174_0 oxidoreductase activity K07114 - - 0.00000000000000000000000000000000000000000000000000001804 198.0
YHH3_k127_2186632_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K08483 - 2.7.3.9,2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007154 516.0
YHH3_k127_2186632_1 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.0000000000000000000000000226 111.0
YHH3_k127_2186632_2 phosphocarrier protein HPr K11189 - - 0.00000000000000000009681 92.0
YHH3_k127_2186632_3 TIGRFAM bifunctional phosphoglucose phosphomannose isomerase K15916 - 5.3.1.8,5.3.1.9 0.00000000003865 68.0
YHH3_k127_2211818_0 Belongs to the peptidase M16 family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 311.0
YHH3_k127_2211818_1 Methyltransferase domain - - - 0.00000000000000000000000004342 119.0
YHH3_k127_2211818_2 acetyltransferase - - - 0.0000000000000000000000004149 113.0
YHH3_k127_2242241_0 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007707 342.0
YHH3_k127_2242241_1 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000004275 197.0
YHH3_k127_2246365_0 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 298.0
YHH3_k127_2246365_1 Putative regulatory protein - - - 0.0000000000000000003958 89.0
YHH3_k127_2283651_0 peptidase activity, acting on L-amino acid peptides K01337,K05994,K20276 - 3.4.11.10,3.4.21.50 0.00000000000000000000000000000000000001775 156.0
YHH3_k127_2283651_1 protein related to plant photosystem II stability assembly factor - - - 0.000000000002838 78.0
YHH3_k127_2321580_0 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000001752 173.0
YHH3_k127_2347449_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008319 400.0
YHH3_k127_2347449_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0000028,GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009891 291.0
YHH3_k127_2347449_10 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.000000000002451 70.0
YHH3_k127_2347449_11 Forms part of the polypeptide exit tunnel K02926 - - 0.0000000004722 64.0
YHH3_k127_2347449_2 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000009139 203.0
YHH3_k127_2347449_3 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000001626 185.0
YHH3_k127_2347449_4 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000009654 152.0
YHH3_k127_2347449_5 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000000004466 126.0
YHH3_k127_2347449_6 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.0000000000000000000000000000004831 124.0
YHH3_k127_2347449_7 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000003176 115.0
YHH3_k127_2347449_8 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000008262 104.0
YHH3_k127_2347449_9 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000007201 91.0
YHH3_k127_2361218_0 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744,K09774 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001681 274.0
YHH3_k127_237656_0 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003803 480.0
YHH3_k127_237656_1 quinone binding K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000003464 175.0
YHH3_k127_237656_2 4 iron, 4 sulfur cluster binding K00331,K14088,K14105 - 1.6.5.3 0.00000000000000000000000000000000000000000000647 166.0
YHH3_k127_237656_3 PFAM NADH Ubiquinone plastoquinone (complex I) K12137 - - 0.00000000000000000000000002241 118.0
YHH3_k127_237656_4 PFAM NADH-ubiquinone oxidoreductase, chain 49kDa K00333,K12142,K15830 GO:0003674,GO:0005488,GO:0016151,GO:0043167,GO:0043169,GO:0046872,GO:0046914 1.6.5.3 0.00000000000000000009479 99.0
YHH3_k127_2390584_0 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 393.0
YHH3_k127_2390584_1 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.00000000000000000000000000000003007 134.0
YHH3_k127_2390584_2 acetyltransferase - - - 0.0000000000000000004615 96.0
YHH3_k127_2403628_0 Permease YjgP YjgQ family protein K07091,K11720 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000000000000000000000000000000000000000000000000002554 257.0
YHH3_k127_2403628_1 lipopolysaccharide-transporting ATPase activity K11720 - - 0.000000000000000001136 88.0
YHH3_k127_240952_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 466.0
YHH3_k127_2411225_0 Protein of unknown function (DUF541) K09797 - - 0.00000000000000000000000000000000000000000000000000003026 196.0
YHH3_k127_2411825_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 604.0
YHH3_k127_2427844_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000008299 179.0
YHH3_k127_2446688_0 serine-type peptidase activity K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 592.0
YHH3_k127_2463793_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 424.0
YHH3_k127_2484786_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036,K02068,K06857 - 3.6.3.27,3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000000000008896 235.0
YHH3_k127_2484786_1 phosphoserine phosphatase activity K01768,K07315 - 3.1.3.3,4.6.1.1 0.000000000000000000000000000000000000000007163 171.0
YHH3_k127_2486728_0 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.000000000000000000000000000000000000000000000000000001472 199.0
YHH3_k127_2486728_1 cellulose binding K00505 - 1.14.18.1 0.00000000002352 66.0
YHH3_k127_2505905_0 PFAM Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000001192 121.0
YHH3_k127_2505905_1 PTS system, Lactose/Cellobiose specific IIB subunit K02768,K02769,K02770 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563 2.7.1.202 0.0000000000000000000000008546 109.0
YHH3_k127_2506541_0 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004259 362.0
YHH3_k127_2506541_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006097 298.0
YHH3_k127_2565863_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 374.0
YHH3_k127_2565863_1 Bacterial regulatory protein, Fis family K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 316.0
YHH3_k127_2565863_2 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.0000000000006781 78.0
YHH3_k127_2569215_0 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000000000000000000000001215 175.0
YHH3_k127_2569215_1 TPR Domain containing protein K12600 - - 0.0000000000000001947 91.0
YHH3_k127_2569215_2 PFAM histone deacetylase superfamily - - - 0.0000001456 57.0
YHH3_k127_2569215_3 Putative zinc-finger - - - 0.0000003471 57.0
YHH3_k127_2570380_0 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 315.0
YHH3_k127_2570380_1 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000000000000000000005491 235.0
YHH3_k127_2571305_0 NADH dehydrogenase K00335,K18331 - 1.12.1.3,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 412.0
YHH3_k127_2571305_1 4Fe-4S ferredoxin, iron-sulfur binding - - - 0.00000000000000000000000000000000000000000000000000333 189.0
YHH3_k127_2571425_0 Propeptide_C25 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002743 298.0
YHH3_k127_2571425_1 Two component regulator propeller - - - 0.0000000000000000000000000000000000002976 154.0
YHH3_k127_2575616_0 PFAM NADH Ubiquinone plastoquinone (complex I) K05568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004198 372.0
YHH3_k127_2575616_1 Na+/H+ ion antiporter subunit K05569 - - 0.0000000000000000000000000000002689 128.0
YHH3_k127_2575616_2 antiporter activity K05570 - - 0.000000000000001908 78.0
YHH3_k127_2618390_0 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001425 286.0
YHH3_k127_2618390_1 transcriptional regulator K07736 - - 0.0000000000009113 76.0
YHH3_k127_2618390_2 helix_turn_helix, mercury resistance - - - 0.0001017 52.0
YHH3_k127_2626638_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 350.0
YHH3_k127_2626638_1 Bacterial phospho-glucose isomerase C-terminal SIS domain K15916 - 5.3.1.8,5.3.1.9 0.00000000000000000000000000000000000000000000000000007453 195.0
YHH3_k127_2638037_0 Participates in both transcription termination and antitermination K02600 GO:0001000,GO:0001121,GO:0001125,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043175,GO:0043244,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003891 395.0
YHH3_k127_2638037_1 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000003127 244.0
YHH3_k127_2638037_2 Required for maturation of 30S ribosomal subunits K09748 - - 0.000000000000000000000000001779 117.0
YHH3_k127_2650544_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 GO:0003674,GO:0003824,GO:0004749,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016772,GO:0016778,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004576 388.0
YHH3_k127_2650544_1 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000001924 169.0
YHH3_k127_2650544_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000001506 136.0
YHH3_k127_2650544_3 Could be involved in septation K06412 - - 0.00000000096 67.0
YHH3_k127_2653749_0 Type IV pilus assembly protein PilM; K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000001849 250.0
YHH3_k127_2653749_1 PFAM Pilus assembly protein, PilO K02664 - - 0.000000000000001273 86.0
YHH3_k127_2653749_2 fimbrial biogenesis protein PilN K02663 - - 0.00000000000000406 83.0
YHH3_k127_2657612_0 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004443 460.0
YHH3_k127_2657612_1 Exonuclease, RNase T and DNA polymerase III - - - 0.0000000000000000000001665 99.0
YHH3_k127_2666190_0 PFAM oxidoreductase FAD NAD(P)-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 308.0
YHH3_k127_2666190_1 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000007358 157.0
YHH3_k127_2684475_0 Integral membrane sensor signal transduction histidine kinase K07709,K13924 - 2.1.1.80,2.7.13.3,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000006752 276.0
YHH3_k127_2684475_1 PglZ domain - - - 0.000000000000000000000000000499 115.0
YHH3_k127_2684475_2 Mut7-C ubiquitin K09122 - - 0.000000000000007913 76.0
YHH3_k127_2686520_0 Acyl-CoA dehydrogenase, C-terminal domain K18244 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 360.0
YHH3_k127_2686661_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002086 252.0
YHH3_k127_2686661_1 COG0760 Parvulin-like peptidyl-prolyl isomerase K03769,K03771 - 5.2.1.8 0.000000000000000000000000000001632 127.0
YHH3_k127_2686661_2 OsmC-like protein K07397 - - 0.000000000000000000000000000001934 124.0
YHH3_k127_2746180_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0001968,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005518,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030312,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035375,GO:0042866,GO:0043236,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0044877,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050840,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 4.2.1.11 0.00000000000000000000000000000000000000002933 169.0
YHH3_k127_2832030_0 TIGRFAM hydro-lyase, Fe-S type, tartrate fumarate subfamily, alpha subunit K01677,K03779 - 4.2.1.2,4.2.1.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004318 308.0
YHH3_k127_2832030_1 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000003604 220.0
YHH3_k127_2832030_2 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000698 127.0
YHH3_k127_2857495_0 Metallo-beta-lactamase superfamily K02238 - - 0.000000000000000000000007523 115.0
YHH3_k127_2857495_1 Binding-protein-dependent transport system inner membrane component K02025 - - 0.00000000000000000000447 97.0
YHH3_k127_2873344_0 domain protein K02238 - - 0.00000000000000000000000000000268 134.0
YHH3_k127_2911268_1 protein secretion K09800 - - 0.00000000003276 72.0
YHH3_k127_2911268_2 Zn_pept K05996 - 3.4.17.18 0.00001293 55.0
YHH3_k127_2927897_0 Evidence 5 No homology to any previously reported sequences - - - 0.000158 45.0
YHH3_k127_2940601_0 - - - - 0.00004652 55.0
YHH3_k127_2943542_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000327 239.0
YHH3_k127_2943542_1 PFAM 2-hydroxyglutaryl-CoA dehydratase D-component - - - 0.000000000000000000000000000000000000000009118 156.0
YHH3_k127_2943542_2 transferase activity, transferring glycosyl groups K01186,K01371,K20276 - 3.2.1.18,3.4.22.38 0.000003017 59.0
YHH3_k127_2943542_3 FlgD Ig-like domain - - - 0.00001567 57.0
YHH3_k127_2991985_0 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000004351 244.0
YHH3_k127_2992168_0 FAD dependent oxidoreductase K03388,K16885 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 406.0
YHH3_k127_2992168_1 heterodisulfide reductase K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000326 74.0
YHH3_k127_3005147_0 COG0607 Rhodanese-related sulfurtransferase - - - 0.0000000000000000003175 95.0
YHH3_k127_3005147_1 cellulase activity - - - 0.0002396 54.0
YHH3_k127_3005523_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 537.0
YHH3_k127_3005523_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006858 311.0
YHH3_k127_3005523_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000002228 231.0
YHH3_k127_3021876_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 4.907e-246 773.0
YHH3_k127_3021876_1 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000001635 212.0
YHH3_k127_3021876_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000001842 60.0
YHH3_k127_3021876_3 - - - - 0.000007889 54.0
YHH3_k127_3079012_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003332 292.0
YHH3_k127_3079012_1 ATPases associated with a variety of cellular activities K02003 - - 0.0000003625 52.0
YHH3_k127_3079012_2 Belongs to the ompA family - - - 0.00007403 48.0
YHH3_k127_3141511_0 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 507.0
YHH3_k127_3168477_0 Polymer-forming cytoskeletal - - - 0.000005648 59.0
YHH3_k127_3168477_1 Is the anti-sigma factor for SigW. The presence of RsiW leads to the inactivation of SigW, and its proteolytic destruction to sigma-W activation - GO:0005575,GO:0016020 - 0.0002131 53.0
YHH3_k127_3178026_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K20810 - 3.5.4.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 301.0
YHH3_k127_3178026_1 PFAM amidohydrolase K01464 - 3.5.2.2 0.000000000000000000000000000000006662 130.0
YHH3_k127_3209305_0 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000001135 196.0
YHH3_k127_3209305_1 - - - - 0.000000000000000000000000000006239 130.0
YHH3_k127_3209305_2 Methyltransferase small domain - - - 0.00000000000000003206 93.0
YHH3_k127_3209305_3 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000002189 78.0
YHH3_k127_3209305_4 - - - - 0.00000000000002822 74.0
YHH3_k127_3209305_5 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0001254 46.0
YHH3_k127_3253847_0 BNR repeat-like domain K05989 - 3.2.1.40 0.0001104 48.0
YHH3_k127_3253847_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0009346 50.0
YHH3_k127_3258580_0 TIGRFAM RNA polymerase sigma factor, FliA WhiG K02405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006077 248.0
YHH3_k127_3258580_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000003232 197.0
YHH3_k127_3258580_2 two component, sigma54 specific, transcriptional regulator, Fis family K02667 - - 0.00000000000000000001671 103.0
YHH3_k127_3262389_0 Sulfatase - - - 0.000000000000000000000000000000000000000008562 170.0
YHH3_k127_3288047_0 PFAM Peptidase M16 inactive domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 303.0
YHH3_k127_3288047_1 Mycolic acid cyclopropane synthetase - - - 0.00000000000001812 74.0
YHH3_k127_3348758_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 336.0
YHH3_k127_3348758_1 alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001066 267.0
YHH3_k127_3348758_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.00000000000000000000004937 101.0
YHH3_k127_3353149_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 453.0
YHH3_k127_3353149_1 Right handed beta helix region - - - 0.0000002863 62.0
YHH3_k127_3359432_0 - K07283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 293.0
YHH3_k127_3359432_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000006209 195.0
YHH3_k127_3413234_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000001267 208.0
YHH3_k127_3413234_1 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000001242 199.0
YHH3_k127_3418009_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 5.659e-200 637.0
YHH3_k127_3418009_1 carboxylase, biotin carboxylase K01961,K01968,K11263 - 6.3.4.14,6.4.1.2,6.4.1.3,6.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005778 427.0
YHH3_k127_3418009_2 Biotin-requiring enzyme - - - 0.00000000000000000002663 97.0
YHH3_k127_3420692_0 Oxidoreductase family, NAD-binding Rossmann fold K13018 - 2.3.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004106 365.0
YHH3_k127_3420692_1 PFAM transferase hexapeptide repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000005038 230.0
YHH3_k127_3469448_0 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006311 319.0
YHH3_k127_3469448_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000001627 205.0
YHH3_k127_347138_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003176 327.0
YHH3_k127_347138_1 Intracellular proteinase inhibitor - - - 0.00000000000000001875 86.0
YHH3_k127_3523998_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 467.0
YHH3_k127_3523998_1 PFAM photosystem I assembly BtpA K06971 - - 0.00000000788 59.0
YHH3_k127_3533564_0 Belongs to the glycosyl hydrolase 5 (cellulase A) family K19355 - 3.2.1.78 0.00000000000000000000000000000000000000001955 166.0
YHH3_k127_3549242_0 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009546 392.0
YHH3_k127_3549242_1 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000208 211.0
YHH3_k127_3577834_0 polysaccharide export K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007192 255.0
YHH3_k127_3577834_1 Chain length determinant protein K01153,K05789,K07011,K16554 - 3.1.21.3 0.000007195 53.0
YHH3_k127_364930_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 598.0
YHH3_k127_3655530_0 Endonuclease I K07004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 308.0
YHH3_k127_3655530_1 general secretion pathway protein K02456,K02650 - - 0.00000362 54.0
YHH3_k127_3661407_0 Protein of unknown function (DUF2723) K16928 - - 0.00000000000000000000000000000000000000000000000000000000000000001382 239.0
YHH3_k127_3661407_1 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000002334 107.0
YHH3_k127_3669514_0 AIR synthase related protein, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009777 329.0
YHH3_k127_3684652_0 Belongs to the glycosyl hydrolase 57 family K16149 - 2.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006931 474.0
YHH3_k127_3710936_0 cellulase activity K06882 - - 0.0000000000000000000000000000000000000000000007115 175.0
YHH3_k127_3710936_1 cell adhesion involved in biofilm formation - - - 0.000000000000008749 87.0
YHH3_k127_371920_0 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 1.006e-200 636.0
YHH3_k127_371920_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003786 322.0
YHH3_k127_371920_2 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 311.0
YHH3_k127_371920_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000007638 225.0
YHH3_k127_371920_4 acr, cog1399 K07040 - - 0.00000000000000000001285 98.0
YHH3_k127_371920_5 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000005584 87.0
YHH3_k127_3786644_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 412.0
YHH3_k127_3786644_1 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K14091 - - 0.0000000000000000000000000000000000000000001808 168.0
YHH3_k127_3786644_2 PFAM NADH-ubiquinone oxidoreductase, chain 49kDa K00333,K14090 - 1.6.5.3 0.0000000001443 63.0
YHH3_k127_3786644_3 hydrogenase maturation protease K08315 GO:0003674,GO:0003824,GO:0004175,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.23.51 0.0000000002417 68.0
YHH3_k127_3788372_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000001809 271.0
YHH3_k127_3812068_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 1.826e-204 651.0
YHH3_k127_3812068_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.0003457 48.0
YHH3_k127_3845989_0 Male sterility protein - - - 0.000000000000000000000000000000000000000000000000000000000746 215.0
YHH3_k127_3845989_1 Long-chain fatty acid--CoA ligase K01897 - 6.2.1.3 0.0000000000000000000001197 102.0
YHH3_k127_3854397_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567,K04568 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006518,GO:0006520,GO:0006629,GO:0006644,GO:0006650,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009405,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019637,GO:0019752,GO:0030312,GO:0030322,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0040007,GO:0042221,GO:0042391,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046471,GO:0046483,GO:0046486,GO:0046677,GO:0046872,GO:0050896,GO:0051704,GO:0065007,GO:0065008,GO:0071704,GO:0071944,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005437 532.0
YHH3_k127_3854397_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 392.0
YHH3_k127_3854397_2 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005239 322.0
YHH3_k127_3854397_3 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000006342 233.0
YHH3_k127_3854397_4 protein with conserved CXXC pairs K19411 GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170 - 0.000000000000000000000000000000000000000002987 160.0
YHH3_k127_3854397_5 Catalyzes the specific phosphorylation of arginine residues in proteins K19405 - 2.7.14.1 0.0000000000000000000000000000000000000001391 156.0
YHH3_k127_3861373_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000004413 209.0
YHH3_k127_3861373_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000002404 70.0
YHH3_k127_3870771_0 PFAM X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009806 353.0
YHH3_k127_3886015_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008224 524.0
YHH3_k127_3886015_1 Rubredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 292.0
YHH3_k127_3886015_2 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000004269 158.0
YHH3_k127_3886015_3 Rubrerythrin - - - 0.0000000000000000000000000000002564 128.0
YHH3_k127_3922025_0 PFAM Aminotransferase class I and II K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 336.0
YHH3_k127_3928157_0 PFAM Class II aldolase adducin K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000002429 214.0
YHH3_k127_3928157_1 Ethanolamine utilisation protein EutN/carboxysome K04028 GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 0.00000000000000000001275 94.0
YHH3_k127_3928157_2 Ethanolamine utilisation protein EutN/carboxysome K04028 - - 0.00002074 47.0
YHH3_k127_394281_0 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005769 316.0
YHH3_k127_394281_1 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00006204 50.0
YHH3_k127_3957641_0 - - - - 0.00000000000000000000000000000000000000000000000000000001664 209.0
YHH3_k127_3957641_1 - - - - 0.00000000000002087 83.0
YHH3_k127_3973196_0 Transglutaminase-like superfamily - - - 0.000000000000000000000003836 120.0
YHH3_k127_3995404_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009330,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140097,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 381.0
YHH3_k127_3995404_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000001164 57.0
YHH3_k127_4032724_0 Immune inhibitor A peptidase M6 K09607 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003406 282.0
YHH3_k127_4036728_0 Beta-eliminating lyase K01667 - 4.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 448.0
YHH3_k127_4036728_1 Cys/Met metabolism PLP-dependent enzyme K01739,K01758,K01760,K01761 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004121,GO:0004123,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48,4.4.1.1,4.4.1.11,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 417.0
YHH3_k127_405558_0 PFAM thiamine pyrophosphate enzyme K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000008991 235.0
YHH3_k127_405558_1 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000001233 216.0
YHH3_k127_4093969_0 PFAM Ferredoxin thioredoxin reductase catalytic beta chain - - - 0.00000000000000000000000000000000000000000000000008374 179.0
YHH3_k127_4093969_1 PFAM Glutaredoxin K06191 - - 0.00000000000000000000001833 105.0
YHH3_k127_4093969_2 Rubrerythrin - - - 0.0000004604 56.0
YHH3_k127_4130892_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004811 400.0
YHH3_k127_4130892_1 Belongs to the Orn Lys Arg decarboxylase class-II family K01586 - 4.1.1.20 0.0000000000000000000000000000000005595 135.0
YHH3_k127_4132141_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000004097 179.0
YHH3_k127_4132141_1 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins K07533 - 5.2.1.8 0.00000000000002077 85.0
YHH3_k127_4180461_0 uridine kinase K00876 - 2.7.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000577 286.0
YHH3_k127_4180461_1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.000000000000000000000000000000001814 134.0
YHH3_k127_4180461_2 C4-type zinc ribbon domain K07164 - - 0.0000001009 62.0
YHH3_k127_4180461_3 Domain of unknown function (DUF1730) K18979 - 1.17.99.6 0.00003926 48.0
YHH3_k127_4190659_0 Thioredoxin-like [2Fe-2S] ferredoxin K05586 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000001979 198.0
YHH3_k127_4190659_1 cheY-homologous receiver domain K03413,K07315,K13924 - 2.1.1.80,3.1.1.61,3.1.3.3 0.00000000000000008774 87.0
YHH3_k127_4203335_0 Fe-S cluster domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 315.0
YHH3_k127_4203335_1 sigma factor antagonist activity K03458,K04757 - 2.7.11.1 0.000000000000000000000000000000000000002371 156.0
YHH3_k127_4203335_2 PFAM DRTGG domain - - - 0.000000000000000000000000346 110.0
YHH3_k127_4212270_0 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006906 566.0
YHH3_k127_4212270_1 Aldehyde dehydrogenase family K00294 - 1.2.1.88 0.0000000000000000000000000000000000000000000000001173 181.0
YHH3_k127_4235480_0 Ribonuclease E/G family K08301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 454.0
YHH3_k127_4235480_1 Ribosomal prokaryotic L21 protein K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000002806 87.0
YHH3_k127_4266932_0 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595,K06883 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 312.0
YHH3_k127_4266932_1 - - - - 0.000000000000000004005 86.0
YHH3_k127_4269252_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 537.0
YHH3_k127_4269252_1 Polysaccharide biosynthesis protein K01784,K02473,K03274 - 5.1.3.2,5.1.3.20,5.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 356.0
YHH3_k127_4269252_2 diguanylate cyclase - - - 0.00000000000000000000000000000000000000003074 157.0
YHH3_k127_427019_0 NAD- dependent epimerase dehydratase K01710,K08678 - 4.1.1.35,4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 498.0
YHH3_k127_427019_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000004443 131.0
YHH3_k127_4275115_0 lyase activity K01387,K03301 - 3.4.24.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004163 364.0
YHH3_k127_4281022_0 Glycosyl transferase family 41 K09667 - 2.4.1.255 0.000004534 58.0
YHH3_k127_4288530_0 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006635 320.0
YHH3_k127_4299646_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 298.0
YHH3_k127_4299646_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000167 256.0
YHH3_k127_4333621_0 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001443 282.0
YHH3_k127_4333621_1 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.00000000000000000000000000000000002179 145.0
YHH3_k127_4333621_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.000000000000000000000000001949 115.0
YHH3_k127_441032_0 UvrD/REP helicase N-terminal domain K03656,K03657 GO:0000018,GO:0000166,GO:0000287,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0009892,GO:0009987,GO:0010605,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030312,GO:0030554,GO:0031323,GO:0031324,GO:0032392,GO:0032508,GO:0032552,GO:0032554,GO:0032558,GO:0032564,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0036094,GO:0040007,GO:0042623,GO:0043138,GO:0043140,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0045910,GO:0045934,GO:0046483,GO:0046872,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051276,GO:0051716,GO:0060255,GO:0060542,GO:0060543,GO:0065007,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 360.0
YHH3_k127_441032_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000003598 102.0
YHH3_k127_441032_2 Belongs to the amidase family K01426,K19795 - 3.5.1.4,3.5.1.95 0.000006373 49.0
YHH3_k127_4505659_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 484.0
YHH3_k127_4516287_0 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 508.0
YHH3_k127_4516287_1 NACHT domain - - - 0.0000000000000000000000000000005372 136.0
YHH3_k127_4516287_2 Belongs to the peptidase S8 family - - - 0.00000000003525 78.0
YHH3_k127_452806_0 ABC transporter K02021,K06147,K06148,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004023 559.0
YHH3_k127_452806_1 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843 - - 0.000000002804 66.0
YHH3_k127_4591336_0 SurA N-terminal domain K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000003764 183.0
YHH3_k127_4625639_0 Aspartyl protease - - - 0.000000000000000000000000002433 126.0
YHH3_k127_4625639_1 Cupin superfamily (DUF985) K09705 - - 0.0000000000000000000000006451 109.0
YHH3_k127_4637576_0 Belongs to the UPF0173 family - - - 0.0000000000000000000000000000000000000000000000000000000001099 211.0
YHH3_k127_4637576_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005,K13888 - - 0.00000000000000000000000000000000000000000000007418 179.0
YHH3_k127_4641363_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 293.0
YHH3_k127_4641363_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000001776 154.0
YHH3_k127_464749_0 - - - - 0.000000000000000000001193 96.0
YHH3_k127_464749_1 COG0477 Permeases of the major facilitator superfamily - - - 0.0000000002015 69.0
YHH3_k127_4663526_0 TIGRFAM Acetate-CoA ligase K01895 - 6.2.1.1 7.933e-251 786.0
YHH3_k127_4663526_1 NADPH-quinone reductase (modulator of drug activity B) K00355 - 1.6.5.2 0.0000000000000000000000000000000000000000000000004534 181.0
YHH3_k127_4663526_2 Calcium/calmodulin dependent protein kinase II association domain - - - 0.000000000000000000000000000000000000000001969 160.0
YHH3_k127_4663526_3 methyltransferase activity - - - 0.000000000000000000000001549 110.0
YHH3_k127_4663526_4 FR47-like protein - - - 0.0000000000006812 72.0
YHH3_k127_4705592_0 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000004049 143.0
YHH3_k127_4705592_1 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000565 137.0
YHH3_k127_4705592_2 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530,K05788 - - 0.0000000000000000000000000002147 116.0
YHH3_k127_4705592_3 Cupin domain - - - 0.0000000000000000000001557 104.0
YHH3_k127_4705592_4 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000000005188 94.0
YHH3_k127_4715701_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008926 510.0
YHH3_k127_4715701_1 PUA-like domain K00958 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 434.0
YHH3_k127_4715701_2 Catalyzes the synthesis of activated sulfate K00958 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000002845 202.0
YHH3_k127_4715701_3 type I phosphodiesterase nucleotide pyrophosphatase K01138 - - 0.000000003482 59.0
YHH3_k127_4742214_0 Ftsk_gamma K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004539 501.0
YHH3_k127_4742214_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000005994 89.0
YHH3_k127_4742214_2 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000002329 60.0
YHH3_k127_4769817_0 methyltransferase K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000001385 217.0
YHH3_k127_4769817_1 NmrA-like family K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000201 166.0
YHH3_k127_47922_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 552.0
YHH3_k127_4813484_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 501.0
YHH3_k127_4813484_1 Carbon starvation protein K06200 - - 0.000000000000000000000000000000006937 130.0
YHH3_k127_4829152_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 402.0
YHH3_k127_4847042_0 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000002645 139.0
YHH3_k127_4847042_1 Phosphate-selective porin O and P - - - 0.00000000000000000000000007126 119.0
YHH3_k127_4852049_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000001029 86.0
YHH3_k127_4857256_0 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 305.0
YHH3_k127_4857256_1 FAD dependent oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000003926 237.0
YHH3_k127_4857256_2 Methyl-viologen-reducing hydrogenase, delta subunit K14127 - 1.8.98.5,1.8.98.6 0.0000000000000009176 82.0
YHH3_k127_4877233_0 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004318 308.0
YHH3_k127_4877233_1 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000002813 102.0
YHH3_k127_4877233_2 PFAM glycosyl transferase family 2 K07011 - - 0.0000000000004056 73.0
YHH3_k127_4911294_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004236 281.0
YHH3_k127_4911294_1 Tetratricopeptide repeat - - - 0.000000000001316 79.0
YHH3_k127_4933438_0 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000001221 129.0
YHH3_k127_4933438_1 deoxyhypusine monooxygenase activity - - - 0.00000000000000009645 87.0
YHH3_k127_4933438_2 - - - - 0.00000000001237 76.0
YHH3_k127_4933438_3 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.00000003778 56.0
YHH3_k127_4938875_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01006,K22424 - 2.7.3.13,2.7.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009018 404.0
YHH3_k127_4938875_1 Sigma-54 interaction domain K03413,K13589 - - 0.0000001005 55.0
YHH3_k127_4946952_0 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008964 488.0
YHH3_k127_4946952_1 Electron transfer flavoprotein domain K03521 - - 0.0000000000000000000000000000000000000324 147.0
YHH3_k127_4978997_0 Peptidylprolyl isomerase K01802,K03769,K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000001039 179.0
YHH3_k127_4978997_1 Peptidase family M23 - - - 0.000000000000000374 82.0
YHH3_k127_4996546_0 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000004366 117.0
YHH3_k127_4996546_1 BrnA antitoxin of type II toxin-antitoxin system K03179 - 2.5.1.39 0.000000000000000000005427 92.0
YHH3_k127_504779_0 Belongs to the peptidase M10A family K07999 - - 0.0000004772 62.0
YHH3_k127_5054882_0 Protein tyrosine kinase - - - 0.00000000000000000000000000000000005787 140.0
YHH3_k127_5054882_1 stress-induced mitochondrial fusion - - - 0.0000000000000000000000000000157 118.0
YHH3_k127_5054882_2 - - - - 0.000000000000001089 78.0
YHH3_k127_5088051_0 peptidase activity, acting on L-amino acid peptides K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 410.0
YHH3_k127_5089227_0 Secretin and TonB N terminus short domain K02666 - - 0.00000000000000000000000000000000000000000000000000000000000008843 226.0
YHH3_k127_5089227_1 domain protein - - - 0.000003122 55.0
YHH3_k127_5090641_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004183 481.0
YHH3_k127_5150412_0 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000000000000000000000000000000000000000000000000001403 229.0
YHH3_k127_5150412_1 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000000000000000000000000000007209 191.0
YHH3_k127_5150412_2 - - - - 0.00000000000000000000000000000000000000005225 160.0
YHH3_k127_5174968_0 TIGRFAM hydrolase, TatD family K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001118 265.0
YHH3_k127_5174968_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000003166 153.0
YHH3_k127_5191461_0 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000007205 246.0
YHH3_k127_5191461_1 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000003499 112.0
YHH3_k127_5211474_0 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.000000000000000008109 96.0
YHH3_k127_5241908_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 498.0
YHH3_k127_5241908_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000006678 198.0
YHH3_k127_5241908_2 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000131 133.0
YHH3_k127_5320513_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 514.0
YHH3_k127_5333084_0 1,4-alpha-glucan branching enzyme activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 406.0
YHH3_k127_5335889_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004411 474.0
YHH3_k127_5375610_0 translation release factor activity K03265 GO:0001666,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0008150,GO:0009628,GO:0016020,GO:0030312,GO:0036293,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070482,GO:0071944 - 0.0000000000000000000000000000000000000001101 164.0
YHH3_k127_5375610_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.00000000000006467 72.0
YHH3_k127_5375610_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000005527 57.0
YHH3_k127_5376275_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008062 392.0
YHH3_k127_5392867_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 613.0
YHH3_k127_5416411_0 zinc-ribbon domain - - - 0.0000000000000000000000005329 121.0
YHH3_k127_5456445_0 Fructose-1,6-bisphosphatase K01622 - 3.1.3.11,4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 585.0
YHH3_k127_5456445_1 smart pdz dhr glgf K04691,K04771,K08070 GO:0008150,GO:0009266,GO:0009628,GO:0050896 1.3.1.74,3.4.21.107 0.00000000000000000000000003108 123.0
YHH3_k127_5456445_2 Peroxiredoxin K03564 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.11.1.15 0.0001371 52.0
YHH3_k127_546903_0 Phosphoenolpyruvate carboxykinase K01610 - 4.1.1.49 1.395e-208 657.0
YHH3_k127_5471381_0 Peptidase, M16 K07263 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 398.0
YHH3_k127_5524167_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.051e-234 738.0
YHH3_k127_5524167_1 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 300.0
YHH3_k127_5524167_2 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000003132 165.0
YHH3_k127_5524167_3 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.00000000000000000399 95.0
YHH3_k127_5535250_0 Alginate export - - - 0.00000000000000000000000000000000001612 150.0
YHH3_k127_5537149_0 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000003193 195.0
YHH3_k127_5537149_1 PBS lyase HEAT-like repeat - - - 0.00005332 52.0
YHH3_k127_5538638_0 FlgD Ig-like domain K21449 - - 0.0000000000000006869 90.0
YHH3_k127_5538638_1 Prokaryotic N-terminal methylation motif K02458,K02671 - - 0.0000009266 59.0
YHH3_k127_5567733_0 Phosphoribulokinase uridine kinase family K00876 - 2.7.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008425 576.0
YHH3_k127_5567733_1 Domain of unknown function (DUF4416) - - - 0.000000000000000000000000000009792 123.0
YHH3_k127_5631947_0 C-terminal binding-module, SLH-like, of glucodextranase - - - 0.000000000000000000000000000000000000001931 156.0
YHH3_k127_5656329_0 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000001207 235.0
YHH3_k127_5656329_1 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000699 206.0
YHH3_k127_5656329_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000004504 164.0
YHH3_k127_5656329_3 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000003381 126.0
YHH3_k127_5656329_4 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000001695 98.0
YHH3_k127_567821_0 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000003308 79.0
YHH3_k127_567821_1 - - - - 0.00000000001602 76.0
YHH3_k127_5713787_0 Glycosyltransferase family 20 K00697,K13057,K20436 - 2.4.1.15,2.4.1.245,2.4.1.347,2.5.1.135 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007991 431.0
YHH3_k127_5719905_0 GXGXG motif - - - 0.00000000000000000000000000000000000000000000000000000000000001488 218.0
YHH3_k127_5719905_1 PFAM glycosyl transferase family 39 - - - 0.00000000000000000000000000000001725 134.0
YHH3_k127_5719905_2 CARDB - - - 0.0000000665 62.0
YHH3_k127_5770170_0 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 434.0
YHH3_k127_5770170_1 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004043 383.0
YHH3_k127_5770170_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007062 372.0
YHH3_k127_5770170_3 PFAM ABC transporter related K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 328.0
YHH3_k127_5770170_4 PFAM ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000279 208.0
YHH3_k127_5770170_5 RNA-metabolising metallo-beta-lactamase K07576 - - 0.00000000000000000000000000003961 118.0
YHH3_k127_5822884_0 Chain length determinant protein - - - 0.0000000000000000000000003846 111.0
YHH3_k127_5822884_1 Protein conserved in bacteria K20920 - - 0.00000000000000006462 94.0
YHH3_k127_5872883_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009256 347.0
YHH3_k127_5872883_1 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000001534 61.0
YHH3_k127_5879879_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 507.0
YHH3_k127_5879879_1 Metallopeptidase family M24 K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 311.0
YHH3_k127_5879879_10 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000002571 70.0
YHH3_k127_5879879_11 Ribosomal protein L30 K02907 - - 0.000000005918 61.0
YHH3_k127_5879879_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000007719 251.0
YHH3_k127_5879879_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007247 247.0
YHH3_k127_5879879_4 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000000002864 226.0
YHH3_k127_5879879_5 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000518 180.0
YHH3_k127_5879879_6 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000004305 164.0
YHH3_k127_5879879_7 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000001285 163.0
YHH3_k127_5879879_8 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009986,GO:0030246,GO:0030247,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:2001065 - 0.000000000000000000000000000001188 129.0
YHH3_k127_5879879_9 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000001532 119.0
YHH3_k127_5884762_0 ATP synthase subunit beta K02133 GO:0000003,GO:0000166,GO:0000275,GO:0001525,GO:0001568,GO:0001944,GO:0002119,GO:0002164,GO:0003006,GO:0003008,GO:0003674,GO:0003824,GO:0005102,GO:0005215,GO:0005488,GO:0005509,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005753,GO:0005754,GO:0005759,GO:0005886,GO:0005929,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006164,GO:0006629,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006839,GO:0006873,GO:0006885,GO:0006897,GO:0006898,GO:0006928,GO:0006929,GO:0006933,GO:0006950,GO:0006952,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0007162,GO:0007275,GO:0007548,GO:0007568,GO:0007588,GO:0007610,GO:0007617,GO:0007618,GO:0007631,GO:0008144,GO:0008150,GO:0008152,GO:0008324,GO:0008340,GO:0008406,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009295,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009790,GO:0009791,GO:0009892,GO:0009986,GO:0009987,GO:0010259,GO:0010468,GO:0010594,GO:0010595,GO:0010605,GO:0010629,GO:0010632,GO:0010634,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016043,GO:0016192,GO:0016310,GO:0016462,GO:0016469,GO:0016477,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017144,GO:0018130,GO:0019098,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0019725,GO:0019829,GO:0019866,GO:0019904,GO:0019953,GO:0022414,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030003,GO:0030004,GO:0030155,GO:0030228,GO:0030334,GO:0030335,GO:0030421,GO:0030554,GO:0030641,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032501,GO:0032502,GO:0032504,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0035239,GO:0035295,GO:0035639,GO:0036094,GO:0036442,GO:0038024,GO:0040011,GO:0040012,GO:0040017,GO:0040024,GO:0040039,GO:0042287,GO:0042288,GO:0042407,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0042645,GO:0042742,GO:0042755,GO:0042776,GO:0042995,GO:0043050,GO:0043167,GO:0043168,GO:0043169,GO:0043207,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043492,GO:0043532,GO:0043535,GO:0043536,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044703,GO:0044769,GO:0045121,GO:0045137,GO:0045259,GO:0045261,GO:0045267,GO:0046034,GO:0046390,GO:0046483,GO:0046872,GO:0046907,GO:0046933,GO:0046961,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048598,GO:0048608,GO:0048609,GO:0048646,GO:0048731,GO:0048856,GO:0048870,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050829,GO:0050896,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051270,GO:0051272,GO:0051453,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0051707,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0055086,GO:0060255,GO:0061024,GO:0061458,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0071944,GO:0072358,GO:0072359,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0097159,GO:0097367,GO:0097730,GO:0098542,GO:0098589,GO:0098655,GO:0098657,GO:0098660,GO:0098662,GO:0098771,GO:0098796,GO:0098798,GO:0098800,GO:0098805,GO:0098857,GO:0099131,GO:0099132,GO:0120025,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902600,GO:1990542,GO:2000145,GO:2000147 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 348.0
YHH3_k127_5884762_1 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000004938 72.0
YHH3_k127_5887448_0 CobW/HypB/UreG, nucleotide-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 312.0
YHH3_k127_5887448_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 314.0
YHH3_k127_5890723_0 Helix-hairpin-helix motif K02237 - - 0.00000000000000000000000000000000000000000000000000000000000000000000539 247.0
YHH3_k127_5896428_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006031 365.0
YHH3_k127_5896428_1 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 299.0
YHH3_k127_5896428_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000006242 67.0
YHH3_k127_5901659_0 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 302.0
YHH3_k127_5901659_1 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000449 209.0
YHH3_k127_5901659_2 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000002546 104.0
YHH3_k127_5908810_0 Zinc metalloprotease (Elastase) - - - 0.0000000000000000000000000000000000001788 161.0
YHH3_k127_5936744_0 TIGRFAM anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 1.278e-284 884.0
YHH3_k127_5936744_1 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000000000000000000000000000006538 211.0
YHH3_k127_5976066_0 Zn peptidase - - - 0.000000000003202 77.0
YHH3_k127_5994721_0 Belongs to the peptidase S16 family - - - 1.328e-305 942.0
YHH3_k127_6003715_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000002026 96.0
YHH3_k127_6003715_1 Tetratricopeptide repeat - - - 0.00003763 56.0
YHH3_k127_6041524_0 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 GO:0003674,GO:0003824,GO:0004016,GO:0009975,GO:0016829,GO:0016849 2.7.7.85 0.000000000000000000000000000000000000000000000000000000000000000000000000009224 258.0
YHH3_k127_6041524_1 Pterin binding enzyme K00796,K13941 - 2.5.1.15,2.7.6.3 0.00000000000000000000000000000000000000000000000000000000000000000000001763 259.0
YHH3_k127_6041524_2 PFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000002908 183.0
YHH3_k127_6059705_0 FAD dependent oxidoreductase K00303 - 1.5.3.1 0.000000000000000000000000000000000000000000000005393 176.0
YHH3_k127_6064132_0 TIGRFAM MATE efflux family protein - - - 0.000000000000000000000000000000000000000000000000000000004026 211.0
YHH3_k127_6064132_1 long-chain fatty acid transporting porin activity - - - 0.0000000000000006461 83.0
YHH3_k127_6065039_0 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000009188 198.0
YHH3_k127_6065039_1 - - - - 0.00000000000000000000000000000000000000000006783 168.0
YHH3_k127_6065039_2 phosphinothricin N-acetyltransferase activity - - - 0.00000000000000000000000000000000000002698 147.0
YHH3_k127_610996_0 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002928 264.0
YHH3_k127_610996_1 DNA-templated transcription, initiation K03088 - - 0.000000002931 65.0
YHH3_k127_611996_0 SMART phosphoesterase PHP domain protein - - - 0.00000000000000000000000000000000000000000009838 177.0
YHH3_k127_611996_1 peptidase activity, acting on L-amino acid peptides K07752 - 3.4.17.22 0.0000000000000006719 79.0
YHH3_k127_611996_2 alginic acid biosynthetic process K07004,K15125,K20276 - - 0.0000006433 60.0
YHH3_k127_6154417_0 cellulase activity K01179,K13735,K21449 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 547.0
YHH3_k127_6157696_0 Peptidase S46 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001152 262.0
YHH3_k127_6157696_1 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000005145 160.0
YHH3_k127_6157821_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009761 263.0
YHH3_k127_6157821_1 lipoprotein transporter activity K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000216 227.0
YHH3_k127_6157821_3 Sugar-specific transcriptional regulator TrmB - - - 0.00000001881 57.0
YHH3_k127_6158660_0 COGs COG0534 Na -driven multidrug efflux pump K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004136 270.0
YHH3_k127_6163925_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000008456 132.0
YHH3_k127_6163925_1 Protease prsW family - - - 0.0000000000000000009163 93.0
YHH3_k127_6298153_0 PFAM Pyruvate ferredoxin flavodoxin oxidoreductase K00177 - 1.2.7.3 0.00000000000000000000000000000000000000000000000000000004201 202.0
YHH3_k127_6298153_1 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000003083 193.0
YHH3_k127_6298153_2 Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000003962 179.0
YHH3_k127_6323402_0 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000007331 198.0
YHH3_k127_6323402_1 ABC-type transport system involved in multi-copper enzyme maturation, permease component - - - 0.00000000000000000000000000000000000000000001116 172.0
YHH3_k127_6323402_2 Tetratricopeptide repeat - - - 0.00000000000000006376 95.0
YHH3_k127_6337054_0 GAF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003905 264.0
YHH3_k127_6337054_1 - - - - 0.000000000000000000000000000000000000000000000000000000002942 212.0
YHH3_k127_6337054_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000009567 150.0
YHH3_k127_6337054_3 - - - - 0.00000000000000000000000000000006841 128.0
YHH3_k127_6337054_4 protein of Bacteria UniRef RepID - - - 0.0000000000000000000000000107 121.0
YHH3_k127_6337054_5 PFAM response regulator receiver - - - 0.0000000000000000000008614 99.0
YHH3_k127_6337054_6 Putative heavy-metal chelation - - - 0.0000000000000004314 92.0
YHH3_k127_6343872_0 ABC-type sugar transport system, periplasmic component K02027 - - 0.00000000000000000000000000000000000000000000001267 186.0
YHH3_k127_6359337_0 Male sterility protein K01710,K01784 - 4.2.1.46,5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 376.0
YHH3_k127_6359337_1 Two component regulator propeller - - - 0.00000000000000000003103 106.0
YHH3_k127_6359337_2 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.0001803 47.0
YHH3_k127_6370999_0 Enoyl-CoA hydratase carnithine racemase K13766,K15312 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000002628 267.0
YHH3_k127_6370999_1 SCO1/SenC - - - 0.0000000000000000000000000000000000000000000000001215 181.0
YHH3_k127_6370999_2 PFAM Thiolase K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000001808 169.0
YHH3_k127_6370999_3 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.0000000000000000000000000000000000000002075 153.0
YHH3_k127_6372120_0 metal-dependent phosphohydrolase, HD sub domain - - - 0.00000000000000000000000000001785 131.0
YHH3_k127_6373002_0 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit K01768,K07315 - 3.1.3.3,4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005109 427.0
YHH3_k127_6373002_1 peptidase M42 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 353.0
YHH3_k127_6373002_2 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008011 352.0
YHH3_k127_6375960_0 Type II IV secretion system protein K02454,K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009641 512.0
YHH3_k127_6375960_1 histidine kinase HAMP region domain protein K03406 - - 0.000007312 51.0
YHH3_k127_6407402_0 2 iron, 2 sulfur cluster binding K00528,K02823,K16951 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006076 284.0
YHH3_k127_6407402_1 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family - - - 0.000000000000000000000000000000000000000000000000000000000000005659 228.0
YHH3_k127_6407402_2 4 iron, 4 sulfur cluster binding K00196,K05796,K12136,K15827 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044464,GO:0055114 - 0.0000000000000000000000000000000000005238 145.0
YHH3_k127_6407402_3 PFAM Hemerythrin HHE cation binding domain K09155 - - 0.0000000000000000000000000000003856 127.0
YHH3_k127_6407402_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000004002 115.0
YHH3_k127_6435932_0 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006139,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008254,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009129,GO:0009131,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009173,GO:0009175,GO:0009218,GO:0009222,GO:0009259,GO:0009261,GO:0009987,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0030145,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042578,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046049,GO:0046050,GO:0046131,GO:0046133,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004489 273.0
YHH3_k127_6435932_1 Glycosyl transferase, family 2 K00786 - - 0.00000000000000000000000000000000000000001605 164.0
YHH3_k127_6435932_2 PFAM glycosyl transferase family 9 - - - 0.00000000001098 72.0
YHH3_k127_6435932_3 - - - - 0.00000004045 55.0
YHH3_k127_6435932_4 lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000004219 60.0
YHH3_k127_6441379_0 tRNA synthetases class I (W and Y) K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 374.0
YHH3_k127_6441379_1 metallopeptidase activity K06402 - - 0.000000000000000000000000000000000000000000001629 173.0
YHH3_k127_6471530_0 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005578 397.0
YHH3_k127_6471530_1 Protein kinase domain K08884 - 2.7.11.1 0.0000000000000005152 85.0
YHH3_k127_6471530_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000001548 77.0
YHH3_k127_6524301_0 membrane protein (DUF2207) - - - 0.000000000000000000000002428 111.0
YHH3_k127_6538177_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000003314 151.0
YHH3_k127_6569185_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 320.0
YHH3_k127_6569185_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000000000000000000000000004391 129.0
YHH3_k127_6569185_2 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000001385 132.0
YHH3_k127_6623584_0 Domain of unknown function (DUF4910) - - - 0.00000000000000000000000000000000000000000000000000003954 198.0
YHH3_k127_6623584_1 cellulose binding - - - 0.00004727 54.0
YHH3_k127_6702487_0 RNase_H superfamily K07502 - - 0.000000000000000000000000000000000000001274 153.0
YHH3_k127_6702487_1 Thioredoxin K03671,K05838 - - 0.00001661 56.0
YHH3_k127_6715058_0 Belongs to the 5'-nucleotidase family K01081,K11751,K17224 - 3.1.3.5,3.6.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005507 424.0
YHH3_k127_6715058_1 alginic acid biosynthetic process K07004,K15125,K20276 - - 0.00003428 49.0
YHH3_k127_6739680_0 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.00000000000000000000000000000000000000000000000000000000000000000005144 247.0
YHH3_k127_6739680_1 PFAM OmpA MotB domain protein K03640 - - 0.00000000000000306 80.0
YHH3_k127_674223_0 COG3209 Rhs family protein K11021 - - 2.556e-244 777.0
YHH3_k127_6743695_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1667.0
YHH3_k127_6743695_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043,K13797 GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.0 1617.0
YHH3_k127_6743695_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000027,GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006417,GO:0006446,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0017148,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045947,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 309.0
YHH3_k127_6743695_3 rRNA binding K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000002347 210.0
YHH3_k127_6743695_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000001178 164.0
YHH3_k127_6743695_5 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000002782 152.0
YHH3_k127_6743695_6 Ribosomal protein L7/L12 dimerisation domain K02935 - - 0.00000000000000000000000000000000000001204 147.0
YHH3_k127_677944_0 ABC transporter K09817 - - 0.00000000000000000000000000000000000000000000000000000002816 205.0
YHH3_k127_677944_1 Belongs to the bacterial solute-binding protein 9 family K09815,K09818 - - 0.00000000000000000000000000001265 124.0
YHH3_k127_678090_0 CBS domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 463.0
YHH3_k127_678090_1 - - - - 0.0000000000000000000000000000000000000000000003084 173.0
YHH3_k127_682579_0 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000001452 109.0
YHH3_k127_6867298_0 Glycoside hydrolase family 3 K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000001513 194.0
YHH3_k127_6867298_1 P-type ATPase K01534 - 3.6.3.3,3.6.3.5 0.0000000000000000000000000000009574 124.0
YHH3_k127_6867298_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000001344 89.0
YHH3_k127_6896482_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000003344 263.0
YHH3_k127_6896482_1 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000005296 199.0
YHH3_k127_6896482_2 Sporulation and spore germination - - - 0.00000000000000000000000002819 115.0
YHH3_k127_6938518_0 Penicillin-binding protein 2 K05515 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0071972,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 432.0
YHH3_k127_6938518_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002556 257.0
YHH3_k127_6938518_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000004191 199.0
YHH3_k127_6938518_3 Rod shape-determining protein K03571 - - 0.000001211 56.0
YHH3_k127_6952219_0 lyase activity - - - 0.000000000000000001232 100.0
YHH3_k127_6989459_0 UvrD REP helicase K03657,K07465 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 349.0
YHH3_k127_6989459_1 Ndr family K01259 - 3.4.11.5 0.000000000000000000000000000001802 132.0
YHH3_k127_7006115_0 PFAM methyl-viologen-reducing hydrogenase delta subunit K14127 - 1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000002599 207.0
YHH3_k127_7006115_1 TIGRFAM hydrogenase maturation protease - - - 0.000000000007603 71.0
YHH3_k127_7006115_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0001034 49.0
YHH3_k127_7033955_0 Nickel-dependent hydrogenase K14126 - 1.8.98.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008162 530.0
YHH3_k127_7096615_0 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005123 261.0
YHH3_k127_7096615_1 Cytidine monophosphokinase K00876 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000278 252.0
YHH3_k127_7096615_2 D-glycero-D-manno-heptose 7-phosphate metabolic process K03271 - 5.3.1.28 0.0000000000000000000000000000007299 124.0
YHH3_k127_7096615_3 Small Multidrug Resistance protein - - - 0.0000000000000322 78.0
YHH3_k127_7115177_0 peptidase U32 - - - 0.0000000000000000000005813 99.0
YHH3_k127_7149948_0 Peptidase family M23 - - - 0.000000000000000000000000000003208 130.0
YHH3_k127_7149948_1 Polymer-forming cytoskeletal - - - 0.00000000000000000006315 95.0
YHH3_k127_7149948_2 Belongs to the ParB family K03497 - - 0.0000001319 53.0
YHH3_k127_7149948_3 sulfuric ester hydrolase activity - - - 0.0001903 51.0
YHH3_k127_7188015_0 PFAM binding-protein-dependent transport systems inner membrane component K02025,K17242 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004209 270.0
YHH3_k127_7188015_1 Binding-protein-dependent transport system inner membrane component K02026 - - 0.00000000000000000000000002924 115.0
YHH3_k127_7194802_0 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000000000009022 190.0
YHH3_k127_7194802_1 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000001413 90.0
YHH3_k127_7198638_0 TIGRFAM histidinol phosphate phosphatase HisJ family K04486 - 3.1.3.15 0.00000000000000000000000000000000000000000000000000001557 198.0
YHH3_k127_7198638_1 energy transducer activity K03646,K03832 - - 0.000000002646 64.0
YHH3_k127_7206569_0 COG0500 SAM-dependent methyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009579 242.0
YHH3_k127_7206569_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000002326 226.0
YHH3_k127_7206569_2 His Kinase A (phosphoacceptor - - - 0.0000000000000000000000000000000000000000000000000000006272 199.0
YHH3_k127_7208558_0 Belongs to the peptidase M24B family K01262,K01271 - 3.4.11.9,3.4.13.9 0.000000000000000000000000000000000000000000000000001009 192.0
YHH3_k127_7208558_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000001403 58.0
YHH3_k127_7274901_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600,K00605,K18847 - 2.1.2.1,2.1.2.10,2.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004201 605.0
YHH3_k127_7274901_1 Major facilitator superfamily K08177 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 322.0
YHH3_k127_7274901_2 PDZ domain (Also known as DHR or GLGF) - - - 0.000000000000000000000004666 113.0
YHH3_k127_7274901_3 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.000000000000000003267 84.0
YHH3_k127_7304308_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000000000000000000000000000000000000002473 172.0
YHH3_k127_7304308_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000000000000000000000000000000000006529 169.0
YHH3_k127_7321164_0 Glycosyl hydrolase family 57 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 478.0
YHH3_k127_7321164_1 protein trimerization K15368 - - 0.0000000005713 68.0
YHH3_k127_7322135_1 peptidylprolyl isomerase K03769 - 5.2.1.8 0.0000000603 65.0
YHH3_k127_7322135_2 PFAM asparagine synthase K06864 - - 0.00000006569 55.0
YHH3_k127_7322135_3 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.00001586 57.0
YHH3_k127_7336680_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 298.0
YHH3_k127_7336680_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 0.0000000007431 61.0
YHH3_k127_7349888_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000001732 226.0
YHH3_k127_7364412_0 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005703 323.0
YHH3_k127_7364412_1 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000742 260.0
YHH3_k127_7364412_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000006066 236.0
YHH3_k127_7390365_0 PDZ DHR GLGF domain protein - - - 0.0000000000000000000009424 111.0
YHH3_k127_7390365_1 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.000000000000000003419 85.0
YHH3_k127_7425412_0 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000009123 231.0
YHH3_k127_7425412_1 Belongs to the carbamoyltransferase HypF family K04656 - - 0.00000000000000000000000000000000000000000000000000000000000004327 218.0
YHH3_k127_7425412_2 Zn finger protein HypA HybF (Possibly regulating hydrogenase expression) K04651 - - 0.000000000000004534 79.0
YHH3_k127_7471213_0 Hep Hag repeat protein - - - 0.0000000000000007126 89.0
YHH3_k127_7471213_1 metallopeptidase activity K19668 - 3.2.1.91 0.00006174 56.0
YHH3_k127_7471213_2 Chaperone of endosialidase - - - 0.0004635 51.0
YHH3_k127_7514016_0 amino acid activation for nonribosomal peptide biosynthetic process K17713 - - 0.000000000000000000000000000000000000000000000005382 193.0
YHH3_k127_7537010_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007665 417.0
YHH3_k127_7537010_1 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000001237 66.0
YHH3_k127_7544896_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 305.0
YHH3_k127_7544896_1 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009467 293.0
YHH3_k127_7544896_2 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000001074 166.0
YHH3_k127_7563000_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 496.0
YHH3_k127_7590564_0 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000002137 211.0
YHH3_k127_7593775_0 Domain of unknown function DUF11 - - - 0.000000000000000000001723 111.0
YHH3_k127_7593775_1 Pilus assembly protein PilX K02673 - - 0.0003543 52.0
YHH3_k127_7610332_0 PFAM IPT TIG domain - - - 0.000003362 61.0
YHH3_k127_7610332_1 Belongs to the peptidase M10A family K07761,K07999 GO:0001101,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009753,GO:0010033,GO:0010035,GO:0010038,GO:0016020,GO:0016787,GO:0019538,GO:0031224,GO:0031225,GO:0032502,GO:0040007,GO:0042221,GO:0043170,GO:0044238,GO:0044425,GO:0044464,GO:0046686,GO:0048519,GO:0048580,GO:0048583,GO:0048589,GO:0048831,GO:0050789,GO:0050793,GO:0050896,GO:0051093,GO:0051239,GO:0051241,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0080186,GO:0140096,GO:1900055,GO:1900056,GO:1901564,GO:1901700,GO:1905622,GO:2000024,GO:2000026,GO:2000028,GO:2000241 - 0.0001217 55.0
YHH3_k127_7624904_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 1.838e-213 677.0
YHH3_k127_7624904_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000003794 129.0
YHH3_k127_7633579_0 Peptidase family M3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 513.0
YHH3_k127_7694863_0 Belongs to the N(4) N(6)-methyltransferase family K00571,K00590 - 2.1.1.113,2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007681 394.0
YHH3_k127_7694863_1 ATPase activity K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 339.0
YHH3_k127_7694863_2 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000001595 157.0
YHH3_k127_7721430_0 pseudouridine synthase activity K06177,K06180 GO:0000027,GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022607,GO:0022613,GO:0022618,GO:0031118,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 5.4.99.23,5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000003076 148.0
YHH3_k127_7721430_1 STAS domain K04749 - - 0.000000000000000000000006283 106.0
YHH3_k127_7733350_0 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000682 301.0
YHH3_k127_7733350_1 Belongs to the skp family K06142 - - 0.000000000003587 73.0
YHH3_k127_774059_0 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003536 276.0
YHH3_k127_7762406_0 Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008658 463.0
YHH3_k127_7766671_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034335,GO:0034641,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0046872,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 348.0
YHH3_k127_7766671_1 Participates in initiation and elongation during chromosome replication - - - 0.00000000000000000000000002014 119.0
YHH3_k127_7789334_0 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000003932 172.0
YHH3_k127_7789334_1 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009314,GO:0009628,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.000000000000000000000000000000000000003025 154.0
YHH3_k127_7789334_2 Succinate dehydrogenase subunit C K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000002577 106.0
YHH3_k127_7869469_0 Belongs to the acetokinase family K00929 - 2.7.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 322.0
YHH3_k127_7869469_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003543 280.0
YHH3_k127_7882838_0 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 396.0
YHH3_k127_7882838_1 cytidine deaminase K01489 - 3.5.4.5 0.00000000000000000000000000000006064 128.0
YHH3_k127_7912567_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 319.0
YHH3_k127_7912567_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.00000000000000000000000000000000000000000000000000000000003035 213.0
YHH3_k127_7912567_2 Histidine kinase HAMP - - - 0.0000000000000000000000000000000000000000000000000000000003318 222.0
YHH3_k127_7912567_3 response regulator receiver K02490 - - 0.0000000000000000001079 97.0
YHH3_k127_7912567_4 - - - - 0.000000008828 63.0
YHH3_k127_7985254_0 PFAM ABC transporter related K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 324.0
YHH3_k127_7985254_1 Protein of unknown function (DUF1646) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 316.0
YHH3_k127_7985254_2 RNA-binding protein homologous to eukaryotic snRNP K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000006159 240.0
YHH3_k127_7985254_3 phosphatase activity K07025,K20862 - 3.1.3.102,3.1.3.104 0.00000000000000000000000000000000000000000000005656 175.0
YHH3_k127_8010203_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009972 366.0
YHH3_k127_8010203_1 domain, Protein - - - 0.0001502 51.0
YHH3_k127_8055844_0 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000003305 138.0
YHH3_k127_8055844_1 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0005953 46.0
YHH3_k127_807043_0 Phosphoglycerate kinase K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 428.0
YHH3_k127_807043_1 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002082 291.0
YHH3_k127_807043_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.00000000000000000000000000000000000000000000000000000002979 199.0
YHH3_k127_807043_3 Preprotein translocase SecG subunit K03075 - - 0.00000001525 60.0
YHH3_k127_807043_4 Coagulation factor 5/8 C-terminal domain, discoidin domain - - - 0.000285 48.0
YHH3_k127_8076403_0 Fibronectin type 3 domain - - - 0.00000000000000000005277 97.0
YHH3_k127_8080362_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 396.0
YHH3_k127_8080362_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903,K14067 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009361,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0032991,GO:0042709,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045333,GO:0055114,GO:0071704,GO:0072350,GO:1902494 6.2.1.5,6.2.1.9 0.0000000000000000000000000000000000000002566 151.0
YHH3_k127_8130831_0 HflC and HflK could regulate a protease K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004166 263.0
YHH3_k127_8130831_1 HflC and HflK could encode or regulate a protease K04088,K06897 - 2.5.1.105 0.000000000000000000000000000000000000000000000000000000000000625 231.0
YHH3_k127_8130831_2 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000003733 218.0
YHH3_k127_8130831_3 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000333 166.0
YHH3_k127_8130831_4 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000003116 160.0
YHH3_k127_8151914_0 prosthetic group binding K01644,K01646,K18292 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0008815,GO:0009346,GO:0009987,GO:0015980,GO:0016829,GO:0016830,GO:0016833,GO:0032991,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 4.1.3.25,4.1.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009561 429.0
YHH3_k127_8151914_1 Citrate lyase, alpha subunit (CitF) K01643 - 2.8.3.10 0.000000000003161 77.0
YHH3_k127_8175489_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 566.0
YHH3_k127_8196933_0 cell redox homeostasis - - - 0.0000000000000000000000002787 116.0
YHH3_k127_8196933_1 Cache domain K02482 - 2.7.13.3 0.000000000000000683 81.0
YHH3_k127_8203183_0 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03771 - 5.2.1.8 0.0000000000002092 78.0
YHH3_k127_8203183_1 plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins K01802,K07533 - 5.2.1.8 0.0000000001597 74.0
YHH3_k127_8203183_2 peptidyl-prolyl isomerase K07533 - 5.2.1.8 0.000001544 61.0
YHH3_k127_8214950_0 Part of a membrane complex involved in electron transport K03617 - - 0.0000000001119 62.0
YHH3_k127_8216947_0 Polynucleotide kinase 3 phosphatase - - - 0.000000000000000000000000000000000000000002314 162.0
YHH3_k127_8216947_1 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000002302 150.0
YHH3_k127_8216947_2 Protein of unknown function (DUF3108) - - - 0.0001764 46.0
YHH3_k127_8254985_0 - - - - 0.00000000000006136 84.0
YHH3_k127_8289660_0 Deoxynucleoside kinase K15518 - 2.7.1.113 0.000000000000000000000000000000000000000000000000000000000000000000008183 242.0
YHH3_k127_8289660_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000007679 205.0
YHH3_k127_8289660_2 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000003415 101.0
YHH3_k127_8319316_0 Bacterial extracellular solute-binding protein K02027,K10236 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 462.0
YHH3_k127_8406109_0 PFAM OmpA MotB domain protein K02557 - - 0.000000000000000000000000001082 123.0
YHH3_k127_8406109_1 PIN domain - - - 0.0000000000000000001012 90.0
YHH3_k127_842489_0 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 455.0
YHH3_k127_842489_1 Type II secretion system protein E K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 390.0
YHH3_k127_842489_2 PFAM type II secretion system K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005079 278.0
YHH3_k127_8446958_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0002682,GO:0002684,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006950,GO:0008150,GO:0009314,GO:0009380,GO:0009605,GO:0009607,GO:0009628,GO:0016020,GO:0032991,GO:0035821,GO:0042802,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0071944,GO:0075136,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000725 455.0
YHH3_k127_8446958_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0000000000000000000000000000000000000000000000000000000000000000000775 235.0
YHH3_k127_8451490_0 Bacterial protein of unknown function (DUF885) K01322 - 3.4.21.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 559.0
YHH3_k127_8451490_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004369 310.0
YHH3_k127_8451490_2 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000001434 158.0
YHH3_k127_8451490_3 DEAD-like helicases superfamily K06877 - - 0.00000000000000000000000001275 113.0
YHH3_k127_8465511_0 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008066 404.0
YHH3_k127_8465511_1 - - - - 0.00000000000000000000000000000000000000000000000000275 190.0
YHH3_k127_8465511_2 - - - - 0.000000000000000000000000000000001088 135.0
YHH3_k127_8466026_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 293.0
YHH3_k127_8466026_1 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000002937 250.0
YHH3_k127_8480444_0 transferase activity, transferring glycosyl groups - - - 0.00000002629 66.0
YHH3_k127_8481367_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 6.971e-228 726.0
YHH3_k127_8481367_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000002237 171.0
YHH3_k127_8513003_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 492.0
YHH3_k127_8513003_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000002149 147.0
YHH3_k127_8522424_0 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 346.0
YHH3_k127_8522424_1 PFAM SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000000000000002804 215.0
YHH3_k127_8594642_0 Heat shock 70 kDa protein K04043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 580.0
YHH3_k127_8607069_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 375.0
YHH3_k127_8607069_1 Protein of unknown function (DUF503) K09764 - - 0.00000000000000000000003284 101.0
YHH3_k127_8607069_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000004115 67.0
YHH3_k127_8614593_0 - - - - 0.0000005911 59.0
YHH3_k127_8615995_0 PFAM Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 304.0
YHH3_k127_8615995_1 3-demethylubiquinone-9 3-O-methyltransferase activity K16328 - 2.7.1.83 0.000000000000000000000000000000000000000000000000000000000000005758 220.0
YHH3_k127_8615995_2 Protein of unknown function (DUF3795) - - - 0.00000000000000000000000000000000000003082 145.0
YHH3_k127_8640375_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 325.0
YHH3_k127_8640375_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K03074,K12257 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002825 268.0
YHH3_k127_8652581_0 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000002794 231.0
YHH3_k127_8652581_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000001479 177.0
YHH3_k127_870229_0 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000005372 258.0
YHH3_k127_870229_1 Molybdenum cofactor synthesis domain protein K03750 - 2.10.1.1 0.000001171 52.0
YHH3_k127_8729135_0 gluconolactonase activity K01045,K01053,K01083,K01179,K01757,K02057,K04565,K08884,K13735 GO:0003674,GO:0003824,GO:0004341,GO:0016787,GO:0016788,GO:0052689 1.15.1.1,2.7.11.1,3.1.1.17,3.1.1.2,3.1.3.8,3.1.8.1,3.2.1.4,4.3.3.2 0.00000000000000000007725 104.0
YHH3_k127_8729135_1 Virulence factor BrkB K07058 - - 0.000000000000000054 91.0
YHH3_k127_8729829_0 DNA methylase K00571,K00590 - 2.1.1.113,2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006734 385.0
YHH3_k127_8729829_1 PFAM Acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000001008 201.0
YHH3_k127_8729829_2 SERine Proteinase INhibitors K13963 - - 0.00000000000000000000000000000000000000000000000000002025 197.0
YHH3_k127_8740766_0 Tat pathway signal sequence domain protein K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009844 533.0
YHH3_k127_8740766_1 Psort location Cytoplasmic, score 9.26 K03592 - - 0.000000000000000000000000000000000000001036 157.0
YHH3_k127_8769061_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005459 288.0
YHH3_k127_8769061_1 PDZ domain (Also known as DHR K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007579 291.0
YHH3_k127_8769061_2 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000001366 129.0
YHH3_k127_8900482_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03087 GO:0000988,GO:0000990,GO:0001098,GO:0001101,GO:0001108,GO:0001666,GO:0002791,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009405,GO:0009408,GO:0009410,GO:0009415,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010565,GO:0010604,GO:0010628,GO:0016020,GO:0016987,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0019899,GO:0030312,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032879,GO:0032880,GO:0036293,GO:0040007,GO:0042221,GO:0043175,GO:0043254,GO:0044087,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050708,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051128,GO:0051171,GO:0051173,GO:0051223,GO:0051252,GO:0051254,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0070063,GO:0070201,GO:0070482,GO:0071944,GO:0080090,GO:0090087,GO:0097159,GO:0140110,GO:1901363,GO:1901700,GO:1902680,GO:1903506,GO:1903508,GO:1903530,GO:2000112,GO:2000142,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000385 225.0
YHH3_k127_8900482_1 transcription factor binding K02584,K11914 - - 0.000000000000000002238 87.0
YHH3_k127_8954062_0 BadF BadG BcrA BcrD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004711 456.0
YHH3_k127_8954062_1 BadF BadG BcrA BcrD - - - 0.0000000000000000000000000000000000000000001433 163.0
YHH3_k127_8975722_0 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000001704 247.0
YHH3_k127_8975722_1 polysaccharide deacetylase - - - 0.00000000000000000002683 102.0
YHH3_k127_9017099_0 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.000000000000000000000000000000000000000000000000002884 188.0
YHH3_k127_9017099_1 RNA methyltransferase RsmD family - - - 0.0000000000000000000000000005067 120.0
YHH3_k127_9017099_2 cellulose binding K13735 - - 0.0000000000000002576 91.0
YHH3_k127_9051399_0 PFAM NADH-ubiquinone oxidoreductase, chain 49kDa K00333,K14090 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 511.0
YHH3_k127_9051399_1 PFAM NADH Ubiquinone plastoquinone (complex I) K05568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005073 250.0
YHH3_k127_9051399_2 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit K14088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003504 248.0
YHH3_k127_9051399_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000007852 150.0
YHH3_k127_9051399_4 Belongs to the complex I subunit 6 family K00339,K05578 - 1.6.5.3 0.000000000000000000000005183 108.0
YHH3_k127_9051399_6 Multisubunit Na H antiporter MnhC subunit K00340,K05567 - 1.6.5.3 0.00000000000000000177 89.0
YHH3_k127_9089053_0 Phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 396.0
YHH3_k127_9089053_1 Psort location Cytoplasmic, score 10.00 K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000002846 179.0
YHH3_k127_9101404_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005512 299.0
YHH3_k127_9101404_1 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003765 253.0
YHH3_k127_9101404_2 Sigma 54 modulation protein K05808 - - 0.000000000000001362 82.0
YHH3_k127_9129881_0 Belongs to the peptidase S8 family K20276 - - 0.0000000000000000000000000000000000000000004276 177.0
YHH3_k127_9136858_0 PFAM Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 445.0
YHH3_k127_9136858_1 Domain of unknown function (DUF296) K06934 - - 0.00000000002944 69.0
YHH3_k127_9137134_0 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000354 168.0
YHH3_k127_9137134_1 - - - - 0.00000000000002013 76.0
YHH3_k127_9141550_0 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000007506 187.0
YHH3_k127_9141550_1 Domain of unknown function (DUF4445) - - - 0.0000000000000000000000000000001401 128.0
YHH3_k127_9141550_2 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000001416 65.0
YHH3_k127_9156432_0 metal-dependent phosphohydrolase HD region K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 326.0
YHH3_k127_9156432_1 lyase activity K01387,K03301 - 3.4.24.3 0.0000000000000000000000000000000000000000000000000000000000000001831 240.0
YHH3_k127_9156432_2 - - - - 0.000000000003047 70.0
YHH3_k127_9169072_0 Replicative DNA helicase K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006956 292.0
YHH3_k127_9169072_1 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000004423 190.0
YHH3_k127_917178_0 Peptidase family M3 K08602 - - 0.00000000000000000000000000000000000000000000000008855 199.0
YHH3_k127_9198798_0 Domain of unknown function (DUF1998) K06877 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 572.0
YHH3_k127_9220420_0 Radical SAM K22227 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 374.0
YHH3_k127_9220420_1 Glycosyltransferase, group 1 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001659 275.0
YHH3_k127_9220420_2 Domain of unknown function (DUF1972) - - - 0.0000000000000000000000000000000000000000000004128 181.0
YHH3_k127_9221800_0 NifU-like N terminal domain K04488 - - 0.0000000000000000000000000000000000000000000000000000001002 198.0
YHH3_k127_9221800_1 DHH family - - - 0.0000000000000000000000000000000000000003523 156.0
YHH3_k127_9221800_2 Amidohydrolase family - - - 0.000003373 51.0
YHH3_k127_9221800_3 LON peptidase N-terminal domain and RING finger - - - 0.00004314 50.0
YHH3_k127_9245624_0 Hep Hag repeat protein - - - 0.0000000001254 65.0
YHH3_k127_9245727_0 homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001902 282.0
YHH3_k127_9245727_1 PFAM dihydropteroate synthase, DHPS K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000009024 239.0
YHH3_k127_9245727_2 Periplasmic copper-binding protein (NosD) - - - 0.000000000000000000000000004439 130.0
YHH3_k127_9245727_3 PQQ enzyme repeat - - - 0.0000000000002774 84.0
YHH3_k127_9254951_0 RNA pseudouridylate synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000001382 269.0
YHH3_k127_9254951_1 - - - - 0.000000000001533 73.0
YHH3_k127_9254951_2 Src homology 3 domains - - - 0.00000000002137 75.0
YHH3_k127_9254951_3 osmolarity-sensing cation channel activity - GO:0005575,GO:0005623,GO:0005929,GO:0036477,GO:0042995,GO:0043025,GO:0043226,GO:0044297,GO:0044464,GO:0097458,GO:0097730,GO:0120025 - 0.000000003648 64.0
YHH3_k127_9254951_4 Involved in the biosynthesis of phylloquinone (vitamin K1). Methyltransferase required for the conversion of 2-phytyl- 1,4-beta-naphthoquinol to phylloquinol K03183 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006732,GO:0006766,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008171,GO:0009058,GO:0009108,GO:0009110,GO:0009507,GO:0009536,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0042180,GO:0042181,GO:0042372,GO:0042374,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0051188,GO:0052624,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.1.1.163,2.1.1.201 0.0000002676 62.0
YHH3_k127_9306412_0 Cystathionine beta-synthase K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 432.0
YHH3_k127_9306412_1 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000001485 133.0
YHH3_k127_9323255_0 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 348.0
YHH3_k127_9323255_1 Belongs to the UPF0235 family K09131 - - 0.000002251 55.0
YHH3_k127_933147_0 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006279 321.0
YHH3_k127_933147_1 - - - - 0.0000000000000000000000000000000000002072 150.0
YHH3_k127_9341781_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 343.0
YHH3_k127_9341781_1 PFAM Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009591 261.0
YHH3_k127_937008_0 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003894 278.0
YHH3_k127_937008_1 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000007518 159.0
YHH3_k127_9375005_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000001175 227.0
YHH3_k127_9375005_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.00000000000000000000000000000000000000000000000001371 187.0
YHH3_k127_9402505_0 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0030490,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000000000000000000004597 131.0
YHH3_k127_9402505_1 Belongs to the RNA methyltransferase TrmD family K00554,K01770 GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228,4.6.1.12 0.0000000000000000000000000006532 114.0
YHH3_k127_9402505_2 KH domain K06960 - - 0.000000000000000000000000008291 110.0
YHH3_k127_9453402_0 PFAM Uncharacterised protein family (UPF0164) - - - 0.0000000000000000000000000000000000000000000001006 178.0
YHH3_k127_9453402_2 - - - - 0.0000007411 62.0
YHH3_k127_9469176_0 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K07138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000998 369.0
YHH3_k127_9477360_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000075 394.0
YHH3_k127_9499431_0 Belongs to the helicase family. UvrD subfamily - - - 0.00000000000000000000000000000000000000000005099 171.0
YHH3_k127_9499431_1 Belongs to the peptidase S8 family - - - 0.0000000000000004195 90.0
YHH3_k127_9499431_2 amine dehydrogenase activity - - - 0.0000000000002469 81.0
YHH3_k127_9499820_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005047 316.0
YHH3_k127_9499820_1 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000006363 78.0
YHH3_k127_950468_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 375.0
YHH3_k127_9515095_0 - - - - 0.000000000000000004508 96.0
YHH3_k127_9515095_1 - - - - 0.0007299 50.0
YHH3_k127_9550332_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 479.0
YHH3_k127_9559545_0 Uncharacterised 5xTM membrane BCR, YitT family COG1284 - - - 0.0000000000000000000000000000000000000000000000000000000000000009058 230.0
YHH3_k127_9559545_1 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000001782 89.0
YHH3_k127_9599617_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000008467 143.0
YHH3_k127_9599617_1 Thioredoxin-like domain K03671 - - 0.0000000000000000000000000000000125 130.0
YHH3_k127_9603389_0 Tetratricopeptide repeat K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000002157 263.0
YHH3_k127_9603389_1 amino acid activation for nonribosomal peptide biosynthetic process K06045 - 4.2.1.129,5.4.99.17 0.000000000208 68.0
YHH3_k127_9635381_0 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000000000000000000007358 140.0
YHH3_k127_9635381_1 extracellular matrix structural constituent - - - 0.000000000001557 81.0
YHH3_k127_9635381_2 Psort location CytoplasmicMembrane, score K09793 - - 0.000752 48.0
YHH3_k127_9662110_0 PilT protein domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 291.0
YHH3_k127_9662110_1 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000000000000000000000000000000000000000000000001242 194.0
YHH3_k127_9662110_2 virulence factor Mce family protein K02067 - - 0.000000000000781 77.0
YHH3_k127_9741097_0 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000002706 229.0
YHH3_k127_9748392_0 arsenical-resistance protein K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003227 533.0
YHH3_k127_9748392_1 PFAM Radical SAM domain protein K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 374.0
YHH3_k127_9748392_2 Transcriptional regulator K03892,K21903 - - 0.0000000000000001079 83.0
YHH3_k127_9753941_0 Chain length determinant protein - - - 0.000000009802 61.0
YHH3_k127_9825214_0 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 333.0
YHH3_k127_9850174_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000001553 201.0
YHH3_k127_9850174_1 cheY-homologous receiver domain - - - 0.00000000000000000000000000000003473 132.0
YHH3_k127_9850174_2 - - - - 0.0008316 44.0
YHH3_k127_9959955_0 gag-polyprotein putative aspartyl protease - - - 0.0000000000000000000000000001833 130.0