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Overview

ID MAG04584
Name YHH3_bin.52
Sample SMP0123
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Beggiatoales
Family Beggiatoaceae
Genus
Species
Assembly information
Completeness (%) 95.51
Contamination (%) 3.28
GC content (%) 43.0
N50 (bp) 10,992
Genome size (bp) 3,048,695

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2619

Gene name Description KEGG GOs EC E-value Score Sequence
YHH3_k127_10012210_0 cell adhesion involved in biofilm formation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004949 460.0
YHH3_k127_1003191_0 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB - - - 2.178e-287 894.0
YHH3_k127_1003191_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 5.045e-258 811.0
YHH3_k127_1003191_10 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051604,GO:0071704,GO:0097428,GO:1901564,GO:1902494,GO:1990230,GO:1990234 - 0.000000000000000000000000000000000000000000000001975 179.0
YHH3_k127_1003191_11 Ferredoxin, 2Fe-2S type, ISC system K04755 - - 0.00000000000000000000000000000000000000000000002277 172.0
YHH3_k127_1003191_12 - - - - 0.00000000000000000000000000000000000002247 150.0
YHH3_k127_1003191_13 endoribonuclease L-PSP - - - 0.000000000000000000000000000000003267 130.0
YHH3_k127_1003191_14 Copper chaperone PCu(A)C K09796 - - 0.000000000000000000005206 99.0
YHH3_k127_1003191_15 HupE / UreJ protein K03192 - - 0.000000000000000002026 87.0
YHH3_k127_1003191_2 Leucine-rich repeat (LRR) protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005747 344.0
YHH3_k127_1003191_3 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003628 334.0
YHH3_k127_1003191_4 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 330.0
YHH3_k127_1003191_5 PFAM Transglycosylase SLT domain K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 311.0
YHH3_k127_1003191_6 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000003055 267.0
YHH3_k127_1003191_7 TIGRFAM glycosyl transferase, WecB TagA CpsF family K05946,K13660 - 2.4.1.187 0.0000000000000000000000000000000000000000000000000000000000000000000000000002604 264.0
YHH3_k127_1003191_8 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.000000000000000000000000000000000000000000000000000000002441 207.0
YHH3_k127_1003191_9 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000000000004526 189.0
YHH3_k127_10046917_0 Methylates ribosomal protein L11 K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 341.0
YHH3_k127_10046917_1 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002507 263.0
YHH3_k127_10058880_0 Predicted integral membrane protein (DUF2269) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001729 277.0
YHH3_k127_10058880_1 PFAM chemotaxis K03406 - - 0.000000000000000000000000000000000000000007174 158.0
YHH3_k127_10058880_2 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.0001663 53.0
YHH3_k127_10138699_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 437.0
YHH3_k127_10138699_1 Saccharopine dehydrogenase NADP binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006883 366.0
YHH3_k127_10138699_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003946 327.0
YHH3_k127_10138699_3 serine-type aminopeptidase activity - - - 0.000000000009522 69.0
YHH3_k127_10163466_0 Subtilase family - - - 7.248e-278 879.0
YHH3_k127_10163466_1 Histidine kinase-like ATPases - - - 1.795e-213 679.0
YHH3_k127_10163466_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 323.0
YHH3_k127_10163466_11 CBS-domain-containing membrane protein K07168 - - 0.0000000000000000000000000000000000000000000000000000000000001117 218.0
YHH3_k127_10163466_12 Protein of unknown function (DUF3426) - - - 0.0000000000000000000000000000000000000000000000002803 184.0
YHH3_k127_10163466_13 - - - - 0.0000000000000000000000000000000000000000000000146 177.0
YHH3_k127_10163466_14 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 - 0.000000000000000000000000000000000008379 137.0
YHH3_k127_10163466_15 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000001359 140.0
YHH3_k127_10163466_16 PFAM HPP family protein K07168 - - 0.0000000000000000000000000000007187 125.0
YHH3_k127_10163466_17 - - - - 0.000000000000000000000000001354 119.0
YHH3_k127_10163466_18 TIGRFAM Transposase, IS605 OrfB, C-terminal - - - 0.0000000000002777 70.0
YHH3_k127_10163466_19 RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities - - - 0.0000000000005811 79.0
YHH3_k127_10163466_2 PFAM aminotransferase class-III K01845 - 5.4.3.8 8.455e-202 635.0
YHH3_k127_10163466_20 RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities. May regulate ProP activity through an RNA-based, post-transcriptional mechanism K03607 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003727,GO:0003729,GO:0003730,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006970,GO:0006972,GO:0006974,GO:0007154,GO:0007165,GO:0007231,GO:0008150,GO:0009628,GO:0009651,GO:0009987,GO:0010468,GO:0010608,GO:0010958,GO:0019222,GO:0023052,GO:0032879,GO:0032890,GO:0032892,GO:0033554,GO:0033592,GO:0034057,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0042538,GO:0042710,GO:0043269,GO:0043270,GO:0044010,GO:0044070,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0048518,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051704,GO:0051716,GO:0051952,GO:0051954,GO:0051955,GO:0051957,GO:0060255,GO:0065007,GO:0070881,GO:0071214,GO:0071470,GO:0071472,GO:0071474,GO:0071475,GO:0097159,GO:0097617,GO:0104004,GO:1901363,GO:1902834,GO:1902836,GO:1903789,GO:1903793,GO:1903959,GO:1903961,GO:1904062,GO:1904064 - 0.000000003604 68.0
YHH3_k127_10163466_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 508.0
YHH3_k127_10163466_4 repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 416.0
YHH3_k127_10163466_5 Protein of unknown function (DUF815) K06923 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000806 403.0
YHH3_k127_10163466_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006316 394.0
YHH3_k127_10163466_7 TIGRFAM KamA family protein K19810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 357.0
YHH3_k127_10163466_8 auxin efflux carrier K07088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 346.0
YHH3_k127_10163466_9 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007537 315.0
YHH3_k127_10168329_0 Legume lectin domain - - - 0.0000000000000000000000000000000000006019 157.0
YHH3_k127_10168329_1 ORF6N domain - - - 0.0000000000000000001761 96.0
YHH3_k127_10168329_2 cell adhesion involved in biofilm formation - - - 0.000008896 58.0
YHH3_k127_10204366_0 COG0608 Single-stranded DNA-specific exonuclease K07462 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007171 594.0
YHH3_k127_10204366_1 Transposase, IS605 OrfB family K07496 - - 0.00000000000001271 73.0
YHH3_k127_10241497_0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 1.908e-200 644.0
YHH3_k127_10241497_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000001061 98.0
YHH3_k127_10241497_2 Glycosyl transferases group 1 - - - 0.00000000009301 63.0
YHH3_k127_10290621_0 accessory protein K06959 - - 1.96e-294 922.0
YHH3_k127_10290621_1 ABC-type polysaccharide polyol phosphate transport system ATPase component K09691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 541.0
YHH3_k127_10290621_10 PFAM Pentapeptide repeats (8 copies) K15352 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 306.0
YHH3_k127_10290621_11 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001031 271.0
YHH3_k127_10290621_12 Restriction endonuclease BglII - - - 0.000000000000000000000000000000000000000000000000000000000000002564 221.0
YHH3_k127_10290621_13 Poly(hydroxyalcanoate) granule associated protein (phasin) - - - 0.0000000000000000000000000000000001543 136.0
YHH3_k127_10290621_14 phenylacetate-CoA ligase activity - - - 0.000000000000000000000000000004503 130.0
YHH3_k127_10290621_15 Pyruvate ferredoxin oxidoreductase and related K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000007363 107.0
YHH3_k127_10290621_16 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000001475 94.0
YHH3_k127_10290621_2 PFAM DNA methylase N-4 N-6 domain protein K07319 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 493.0
YHH3_k127_10290621_3 D-alanyl-D-alanine carboxypeptidase K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 481.0
YHH3_k127_10290621_4 cobalamin synthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 473.0
YHH3_k127_10290621_5 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009514 486.0
YHH3_k127_10290621_6 COGs COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductase beta subunit K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009077 419.0
YHH3_k127_10290621_7 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004731 354.0
YHH3_k127_10290621_8 HpcH/HpaI aldolase/citrate lyase family K01644,K18292 - 4.1.3.25,4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 338.0
YHH3_k127_10290621_9 N-4 methylation of cytosine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 312.0
YHH3_k127_10310979_0 protein involved in exopolysaccharide biosynthesis K16554 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005562 617.0
YHH3_k127_10310979_1 TIGRFAM hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009619 410.0
YHH3_k127_10310979_2 - - - - 0.000000000000000000000000000000001226 138.0
YHH3_k127_10411787_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K18005 - 1.12.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 385.0
YHH3_k127_10447775_0 ATPase involved in DNA repair - - - 0.0 1881.0
YHH3_k127_10447775_1 TIGRFAM general secretion pathway protein F - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 492.0
YHH3_k127_10447775_2 Adenine specific DNA methylase Mod - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 353.0
YHH3_k127_10447775_3 Addiction module toxin K19158 - - 0.0000000000000000000000000000000000009852 139.0
YHH3_k127_10447775_4 Protein of unknown function (DUF2281) - - - 0.0009201 45.0
YHH3_k127_10455665_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01006 - 2.7.9.1 1.489e-264 825.0
YHH3_k127_10455665_1 Protein of unknown function DUF262 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001838 278.0
YHH3_k127_10502407_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239,K00244 - 1.3.5.1,1.3.5.4 6.696e-309 955.0
YHH3_k127_10502407_1 glycosyl transferase, family 2 K20444 - - 5.841e-195 631.0
YHH3_k127_10502407_2 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00246 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008217 292.0
YHH3_k127_10502407_3 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005023 283.0
YHH3_k127_10502407_4 PFAM Rickettsia 17 kDa surface antigen - - - 0.00000000000000000000000000000000000000000000004114 173.0
YHH3_k127_10502407_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000425 77.0
YHH3_k127_10502407_6 heat shock protein binding K03686,K14002 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005829,GO:0006457,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006986,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0012505,GO:0019538,GO:0019941,GO:0030163,GO:0030433,GO:0030544,GO:0031072,GO:0031974,GO:0033554,GO:0034620,GO:0034975,GO:0034976,GO:0035966,GO:0035967,GO:0036503,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051087,GO:0051603,GO:0051716,GO:0070013,GO:0070887,GO:0071310,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901698 - 0.000004097 58.0
YHH3_k127_10540368_0 2-oxoglutarate dehydrogenase, E1 component K00164 - 1.2.4.2 0.0 1343.0
YHH3_k127_10540368_1 Membrane protease subunits, stomatin prohibitin homologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 473.0
YHH3_k127_10540368_2 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000000000000000002452 188.0
YHH3_k127_10540368_4 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000000000000002919 126.0
YHH3_k127_10564226_0 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006445 578.0
YHH3_k127_10564226_1 is891 is1136 is1341 K07496 - - 0.000000000000000009525 85.0
YHH3_k127_10564226_2 Belongs to the GARS family K01945,K13713 GO:0000166,GO:0003674,GO:0003824,GO:0004637,GO:0005488,GO:0005524,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.6,6.3.4.13 0.00000000000004113 72.0
YHH3_k127_10601549_0 PFAM von Willebrand factor type A - - - 0.0 1082.0
YHH3_k127_10601549_1 ATPase associated with various cellular activities, AAA_5 K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 476.0
YHH3_k127_10601549_2 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000000000000000000000001892 201.0
YHH3_k127_10652649_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00436 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 3.122e-240 750.0
YHH3_k127_10652649_1 Type I restriction-modification system methyltransferase subunit K03427 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 334.0
YHH3_k127_10652649_2 component i K01665 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.6.1.85 0.0000000000000001641 83.0
YHH3_k127_10676736_0 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 512.0
YHH3_k127_10676736_1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 407.0
YHH3_k127_10676736_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 408.0
YHH3_k127_10676736_3 Domain of unknown function DUF29 - - - 0.00000000000000000000000000000000000000001104 156.0
YHH3_k127_10708342_0 TIGRFAM filamentous hemagglutinin family N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008621 340.0
YHH3_k127_10708342_1 required for the transposition of insertion element IS2404 - - - 0.000000003662 60.0
YHH3_k127_10712681_0 domain, Protein K03112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 312.0
YHH3_k127_10712681_1 Large exoproteins involved in heme utilization or adhesion - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002886 284.0
YHH3_k127_10712681_2 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000002626 243.0
YHH3_k127_10712681_3 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000000000000000000000000000000000000001386 231.0
YHH3_k127_10712681_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000008336 111.0
YHH3_k127_10712681_5 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.000000000000000000004449 94.0
YHH3_k127_10712681_6 CHASE domain - - - 0.0000000000000009066 80.0
YHH3_k127_10712681_7 transferase activity, transferring glycosyl groups - - - 0.000000000000142 85.0
YHH3_k127_10712681_8 Glycosyl Transferase K07011 - - 0.000000007412 60.0
YHH3_k127_10750176_0 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 6.291e-243 758.0
YHH3_k127_10750176_1 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.00000000000000000000000000000000000004253 145.0
YHH3_k127_10750176_2 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.000000000000000000000000000000104 126.0
YHH3_k127_10750176_3 BrnA antitoxin of type II toxin-antitoxin system - - - 0.0003798 44.0
YHH3_k127_10756700_0 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 1.003e-267 829.0
YHH3_k127_10756700_1 Male sterility - - - 7.577e-261 818.0
YHH3_k127_10756700_10 (Lipo)protein K07287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002773 260.0
YHH3_k127_10756700_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000671 240.0
YHH3_k127_10756700_12 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000001446 214.0
YHH3_k127_10756700_13 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000003812 211.0
YHH3_k127_10756700_14 TIGRFAM hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000000000000000000000000000000000006131 199.0
YHH3_k127_10756700_15 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000596 181.0
YHH3_k127_10756700_16 PFAM acyl-coA-binding protein, ACBP - - - 0.0000000000000000000000001802 108.0
YHH3_k127_10756700_17 Lysozyme inhibitor LprI - - - 0.000000000000000001331 97.0
YHH3_k127_10756700_18 Pfam:DUF1311 - - - 0.0000000003253 71.0
YHH3_k127_10756700_19 Probable transposase K07496 - - 0.00007723 49.0
YHH3_k127_10756700_2 Glutathione synthase ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006443 589.0
YHH3_k127_10756700_3 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 547.0
YHH3_k127_10756700_4 acetyltransferase K03789 - 2.3.1.128 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007564 496.0
YHH3_k127_10756700_5 Protein of unknown function (DUF1298) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 490.0
YHH3_k127_10756700_6 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 434.0
YHH3_k127_10756700_7 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006457 395.0
YHH3_k127_10756700_8 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 301.0
YHH3_k127_10756700_9 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007631 285.0
YHH3_k127_10759817_0 Belongs to the ParA family K03609 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009982 441.0
YHH3_k127_10759817_1 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.0000000000000000000000000000000000000000000000000000000000000000005204 234.0
YHH3_k127_10759817_2 - - - - 0.000000000000000000000000002248 116.0
YHH3_k127_10759817_3 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.00000000000000000000000002155 110.0
YHH3_k127_10779653_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 475.0
YHH3_k127_10779653_1 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 425.0
YHH3_k127_10779653_2 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000002566 247.0
YHH3_k127_10779653_3 - - - - 0.0000000000000001901 86.0
YHH3_k127_10779653_4 Glycosyl transferase family 2 - - - 0.0000000000003019 70.0
YHH3_k127_10858134_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 8.23e-243 761.0
YHH3_k127_10858134_1 PFAM Glycosyl transferase family 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 410.0
YHH3_k127_10858134_2 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005681 381.0
YHH3_k127_10858134_3 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000003862 261.0
YHH3_k127_10858134_4 Sugar (and other) transporter K02445,K07783 - - 0.000000000000000000000000000000000000000000000000000000000000000000746 244.0
YHH3_k127_10858134_5 PFAM cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000001311 210.0
YHH3_k127_10858134_6 Thiol disulfide interchange protein K03673 - - 0.00000000000000000000000000000000000000000000000000000000543 207.0
YHH3_k127_10858134_7 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000008071 140.0
YHH3_k127_10858134_8 Glycosyl transferases group 1 - - - 0.00001497 53.0
YHH3_k127_10966435_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18989 - - 0.0 1335.0
YHH3_k127_10966435_1 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 408.0
YHH3_k127_10966435_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003852 341.0
YHH3_k127_10966435_3 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000000000000009566 238.0
YHH3_k127_10966435_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03320 - - 0.00000000000000000000000000000000000000000000000000000000000001902 243.0
YHH3_k127_10966435_5 Transposase, IS605 OrfB family K07496 - - 0.00000000000000000000000000000000000000000000000000001301 190.0
YHH3_k127_10966435_6 Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000000006368 160.0
YHH3_k127_10966435_7 Part of a sulfur-relay system K11179 - - 0.00000000000000000000000000000000000000006413 154.0
YHH3_k127_10966435_8 PFAM von Willebrand factor type A domain K02448 - - 0.0000000000000000000000000000000001778 136.0
YHH3_k127_11053955_0 Diguanylate cyclase - - - 7.977e-219 694.0
YHH3_k127_11053955_1 COG NOG15344 non supervised orthologous group - - - 0.000000000000000001561 85.0
YHH3_k127_11053955_2 Unextendable partial coding region - - - 0.000000000000001115 77.0
YHH3_k127_11053955_3 - - - - 0.000000000001779 67.0
YHH3_k127_11071610_0 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 542.0
YHH3_k127_11071610_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 344.0
YHH3_k127_11071610_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004949 319.0
YHH3_k127_11071610_3 Polyketide cyclase dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000006835 165.0
YHH3_k127_11071610_4 - - - - 0.00001093 58.0
YHH3_k127_11077084_0 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 4.148e-243 773.0
YHH3_k127_11077084_1 D12 class N6 adenine-specific DNA methyltransferase K06223 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 393.0
YHH3_k127_11077084_2 component I K01665 - 2.6.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005583 340.0
YHH3_k127_11077084_3 Branched-chain amino acid aminotransferase K02619 - 4.1.3.38 0.00000000000000000000000000000000000000000002008 168.0
YHH3_k127_11077084_4 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.00000000000000000000000000000000000004758 144.0
YHH3_k127_11077158_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 8.785e-282 874.0
YHH3_k127_11077158_1 4Fe-4S dicluster domain - - - 1.799e-271 841.0
YHH3_k127_11077158_10 DsrE/DsrF-like family K07235 - - 0.0000000000000000000000000000000000000000000000000000000000000000008006 229.0
YHH3_k127_11077158_11 part of a sulfur-relay system K11179 - - 0.000000000000000000000000000000000000000000000000000000000629 203.0
YHH3_k127_11077158_12 Belongs to the DsrF TusC family K07236 - - 0.00000000000000000000000000000000000000000000003161 173.0
YHH3_k127_11077158_13 DsrH like protein K07237 - - 0.000000000000000000000000000000007544 129.0
YHH3_k127_11077158_2 nitrite sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein K11181 - 1.8.99.5 1.139e-213 665.0
YHH3_k127_11077158_3 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004143 398.0
YHH3_k127_11077158_4 reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006844 367.0
YHH3_k127_11077158_5 transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 354.0
YHH3_k127_11077158_6 sulfite reductase K11180 - 1.8.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 327.0
YHH3_k127_11077158_7 Nitrate reductase gamma subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006047 319.0
YHH3_k127_11077158_8 PFAM Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 314.0
YHH3_k127_11077158_9 PFAM methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000006744 239.0
YHH3_k127_1112457_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 4.556e-213 683.0
YHH3_k127_1112457_1 serine-type endopeptidase activity K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 338.0
YHH3_k127_1112457_2 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005275 280.0
YHH3_k127_11142725_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03407 - 2.7.13.3 0.0 1522.0
YHH3_k127_11142725_1 Methyl-accepting chemotaxis protein (MCP) signaling domain - - - 0.0 1103.0
YHH3_k127_11142725_2 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 376.0
YHH3_k127_11142725_3 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 311.0
YHH3_k127_11142725_4 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002802 280.0
YHH3_k127_11142725_5 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.00000000000000000000000000000000000000000000000000000000000000000003778 240.0
YHH3_k127_11142725_6 Response regulator receiver K02658 - - 0.00000000000000000000000000000000000000000000000000000000000002123 216.0
YHH3_k127_11142725_7 CheW-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000003624 215.0
YHH3_k127_11142725_8 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000002033 192.0
YHH3_k127_11142725_9 PFAM Bacterial type II secretion system protein F domain K02653 - - 0.000000000004158 66.0
YHH3_k127_1115346_0 Belongs to the DegT DnrJ EryC1 family K02805,K13017,K18653 - 2.6.1.104,2.6.1.59,2.6.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 542.0
YHH3_k127_1115346_1 Oxidoreductase family, C-terminal alpha/beta domain K13020 - 1.1.1.335 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000767 524.0
YHH3_k127_1115346_10 Short-chain dehydrogenase reductase SDR - - - 0.000001192 59.0
YHH3_k127_1115346_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 457.0
YHH3_k127_1115346_3 LppC putative lipoprotein K07121 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 450.0
YHH3_k127_1115346_4 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 433.0
YHH3_k127_1115346_5 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 354.0
YHH3_k127_1115346_6 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 294.0
YHH3_k127_1115346_7 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.0000000000000000000000000000004183 130.0
YHH3_k127_1115346_8 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000000005745 126.0
YHH3_k127_1115346_9 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.00000000000000000000000003505 114.0
YHH3_k127_11198394_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 2.395e-222 693.0
YHH3_k127_11198394_1 PFAM NADH flavin oxidoreductase NADH oxidase K10680 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 312.0
YHH3_k127_11198394_10 - - - - 0.00001435 50.0
YHH3_k127_11198394_11 - - - - 0.0003655 51.0
YHH3_k127_11198394_2 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.0000000000000000000000000000000000000000000000000000000000000000002775 231.0
YHH3_k127_11198394_3 Transcriptional regulator K13643 - - 0.0000000000000000000000000000000000000000000000000000000000000006306 224.0
YHH3_k127_11198394_4 toxin-antitoxin system toxin component, PIN family - - - 0.000000000000000000000000000002501 124.0
YHH3_k127_11198394_5 proteolysis - - - 0.0000000000000000000000002373 112.0
YHH3_k127_11198394_6 - - - - 0.0000000000000000000000005533 109.0
YHH3_k127_11198394_7 - - - - 0.00000000000000000004427 91.0
YHH3_k127_11198394_8 Phage regulatory protein Rha (Phage_pRha) - - - 0.0000000002631 63.0
YHH3_k127_11198394_9 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0030674,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0042221,GO:0042802,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045203,GO:0045229,GO:0046677,GO:0050896,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0060090,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.000000001481 60.0
YHH3_k127_11202174_0 PUA-like domain K00958 - 2.7.7.4 1.113e-206 647.0
YHH3_k127_11202174_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004154 276.0
YHH3_k127_11202174_2 Dynamin family - - - 0.00000000000000000000000000000000000000000000005707 178.0
YHH3_k127_11222828_0 Sodium Bile acid symporter family K03325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008217 562.0
YHH3_k127_11222828_1 Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction K08482 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007623,GO:0008150,GO:0008152,GO:0009605,GO:0009649,GO:0009966,GO:0009987,GO:0010646,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0019538,GO:0023051,GO:0036211,GO:0042752,GO:0042754,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046777,GO:0048511,GO:0048519,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0065007,GO:0070297,GO:0071704,GO:1901564,GO:1902531 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 542.0
YHH3_k127_11222828_10 Belongs to the HSP15 family K04762 - - 0.000000000000000000000000000000000001191 142.0
YHH3_k127_11222828_11 PFAM KaiB domain K08481 - - 0.0000000000000871 75.0
YHH3_k127_11222828_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008977 498.0
YHH3_k127_11222828_3 transport system, permease component K13895 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006857,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0035672,GO:0042221,GO:0042493,GO:0042884,GO:0042886,GO:0042891,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004515 473.0
YHH3_k127_11222828_4 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000852 438.0
YHH3_k127_11222828_5 PFAM glycosyl transferase family 2 K20444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006337 310.0
YHH3_k127_11222828_6 Transposase, IS605 OrfB family K07496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 299.0
YHH3_k127_11222828_7 Bacterial transferase hexapeptide - - - 0.000000000000000000000000000000000000000000000000000000000000000000002111 239.0
YHH3_k127_11222828_8 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000000000000000000000000003186 233.0
YHH3_k127_11222828_9 SMART Protein-tyrosine phosphatase, low molecular weight K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000002032 186.0
YHH3_k127_11261251_0 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 374.0
YHH3_k127_11261251_1 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837 337.0
YHH3_k127_11261251_2 PFAM GTP-binding protein HSR1-related K06946 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 347.0
YHH3_k127_11304454_0 Acyltransferase - - - 8.403e-236 745.0
YHH3_k127_11304454_1 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007003 435.0
YHH3_k127_11304454_2 peptidyl-tyrosine sulfation - - - 0.0000000001344 72.0
YHH3_k127_11314283_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2201.0
YHH3_k127_11314283_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1987.0
YHH3_k127_11314283_10 PFAM Radical SAM K06871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007364 366.0
YHH3_k127_11314283_11 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417 339.0
YHH3_k127_11314283_12 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006002 332.0
YHH3_k127_11314283_13 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 301.0
YHH3_k127_11314283_14 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 299.0
YHH3_k127_11314283_15 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 294.0
YHH3_k127_11314283_16 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001901 273.0
YHH3_k127_11314283_17 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008459 263.0
YHH3_k127_11314283_18 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002122 242.0
YHH3_k127_11314283_19 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000000000000000000000000004511 235.0
YHH3_k127_11314283_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1170.0
YHH3_k127_11314283_20 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000000000000000000000004579 236.0
YHH3_k127_11314283_21 Forms part of the polypeptide exit tunnel K02926 - - 0.0000000000000000000000000000000000000000000000000000000000000000003909 235.0
YHH3_k127_11314283_22 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000004274 248.0
YHH3_k127_11314283_23 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000000000000000000000006488 228.0
YHH3_k127_11314283_24 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000000003636 226.0
YHH3_k127_11314283_25 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000000000000000002143 221.0
YHH3_k127_11314283_26 Sulfotransferase domain - - - 0.00000000000000000000000000000000000000000000000000000001168 207.0
YHH3_k127_11314283_27 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000000000000000000000007527 196.0
YHH3_k127_11314283_28 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010608,GO:0015935,GO:0016043,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031323,GO:0031329,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043487,GO:0043488,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0061013,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903311,GO:1990904 - 0.00000000000000000000000000000000000000000000000000001472 190.0
YHH3_k127_11314283_29 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000000000002684 190.0
YHH3_k127_11314283_3 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 4.468e-240 746.0
YHH3_k127_11314283_30 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000000000000007255 170.0
YHH3_k127_11314283_31 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000000000000000000000006109 168.0
YHH3_k127_11314283_32 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000002102 159.0
YHH3_k127_11314283_33 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000006729 160.0
YHH3_k127_11314283_34 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000000000000000000000002013 148.0
YHH3_k127_11314283_35 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000000000000000000000054 144.0
YHH3_k127_11314283_36 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000000000000000000001307 141.0
YHH3_k127_11314283_37 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000000000007199 129.0
YHH3_k127_11314283_38 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000000000000000000000000004047 128.0
YHH3_k127_11314283_39 Ribosomal protein L30 K02907 - - 0.000000000000000000002363 94.0
YHH3_k127_11314283_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 3.537e-232 721.0
YHH3_k127_11314283_40 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000000000004234 82.0
YHH3_k127_11314283_5 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 591.0
YHH3_k127_11314283_6 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 489.0
YHH3_k127_11314283_7 Alternative locus ID K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 500.0
YHH3_k127_11314283_8 Capsule synthesis protein K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 424.0
YHH3_k127_11314283_9 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 387.0
YHH3_k127_11324940_0 PFAM Archaeal ATPase - - - 3.852e-308 972.0
YHH3_k127_11324940_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 511.0
YHH3_k127_11324940_2 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000000000000004361 230.0
YHH3_k127_11324940_3 Transposase - - - 0.0000000000000000000000000000000000000002199 162.0
YHH3_k127_11324940_4 Prokaryotic N-terminal methylation motif K02458 - - 0.000000000000000000000000000000000000006955 152.0
YHH3_k127_11324940_5 Prokaryotic N-terminal methylation motif K02459 - - 0.00000000000000007786 89.0
YHH3_k127_11324940_6 - K02456 - - 0.0000000000002731 76.0
YHH3_k127_11324940_7 HTH transcriptional regulator, MerR - - - 0.0000000008363 60.0
YHH3_k127_1136602_0 Histidine Phosphotransfer domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 529.0
YHH3_k127_1136602_1 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000896 289.0
YHH3_k127_1136602_2 Glycosyl transferases group 1 - - - 0.00000000000003656 73.0
YHH3_k127_11366476_0 Belongs to the glycosyl hydrolase 57 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 566.0
YHH3_k127_11366476_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 483.0
YHH3_k127_11366476_2 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 428.0
YHH3_k127_11366476_3 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 374.0
YHH3_k127_11366476_4 Participates in initiation and elongation during chromosome replication K02314 GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004319 358.0
YHH3_k127_11366476_5 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000001556 218.0
YHH3_k127_11366476_7 - - - - 0.0000009226 53.0
YHH3_k127_11374811_0 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009214 572.0
YHH3_k127_11374811_1 PFAM Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.0000000000000000000000000000000000000000000000000000000000008964 211.0
YHH3_k127_11374811_2 - - - - 0.000000000000000000000000000001511 132.0
YHH3_k127_11374811_3 - - - - 0.00001084 58.0
YHH3_k127_11486679_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009727 512.0
YHH3_k127_11486679_1 NmrA-like family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008976 499.0
YHH3_k127_11486679_2 amidinotransferase K00613 - 2.1.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004366 467.0
YHH3_k127_11486679_3 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005142 436.0
YHH3_k127_11486679_4 HPr Serine kinase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 369.0
YHH3_k127_11486679_5 Tetratricopeptide repeat - - - 0.0000000000000000002572 100.0
YHH3_k127_11486679_6 Phosphopantetheine attachment site - - - 0.00000000000000002358 84.0
YHH3_k127_11514245_0 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005523 404.0
YHH3_k127_11514245_1 6-phosphogluconate dehydrogenase, NAD-binding K00020,K00042 - 1.1.1.31,1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007689 325.0
YHH3_k127_11514245_2 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004186 274.0
YHH3_k127_11514245_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002735 260.0
YHH3_k127_11514245_4 Transglycosylase SLT domain - - - 0.000000000000000000000000000000004129 135.0
YHH3_k127_11514245_5 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000001265 119.0
YHH3_k127_11526310_0 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000009721 65.0
YHH3_k127_11526310_1 Sulfotransferase domain - - - 0.00000125 59.0
YHH3_k127_1152833_0 protein conserved in bacteria - - - 9.847e-277 869.0
YHH3_k127_1152833_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 620.0
YHH3_k127_1152833_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 537.0
YHH3_k127_1152833_3 Sigma-70 factor, region 1.2 K03087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 417.0
YHH3_k127_1152833_4 response regulator K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003428 392.0
YHH3_k127_1152833_5 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 388.0
YHH3_k127_1152833_6 N-6 DNA Methylase - - - 0.000000000000000000000000000000000000000000000000000000000000926 214.0
YHH3_k127_1152833_7 cytochrome K08738 - - 0.000000000000000000007847 97.0
YHH3_k127_11538241_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 2.596e-297 927.0
YHH3_k127_11538241_1 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004543 472.0
YHH3_k127_11538241_2 PFAM Fructosamine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 375.0
YHH3_k127_11538241_3 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003983 284.0
YHH3_k127_11538241_4 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001727 266.0
YHH3_k127_11538241_5 phosphonoacetaldehyde hydrolase activity K01489 - 3.5.4.5 0.000000000000000000000000000000000002604 156.0
YHH3_k127_11538241_6 - - - - 0.000000000003373 72.0
YHH3_k127_11538241_7 Belongs to the Orn Lys Arg decarboxylase class-II family K01586 - 4.1.1.20 0.000000308 53.0
YHH3_k127_11560600_0 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 1.229e-250 779.0
YHH3_k127_11560600_1 Belongs to the GARS family K01945,K13713 GO:0000166,GO:0003674,GO:0003824,GO:0004637,GO:0005488,GO:0005524,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.6,6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002995 550.0
YHH3_k127_11560600_2 Uncharacterised protein family (UPF0093) K08973 - - 0.00000000000000000000000000000000000000000000000000000000000000001763 226.0
YHH3_k127_11560600_3 RNA-binding protein - - - 0.00000000000000000000000000000003561 126.0
YHH3_k127_11616442_0 GTP-binding protein TypA K06207 - - 4.335e-306 946.0
YHH3_k127_11616442_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 3.396e-301 947.0
YHH3_k127_11616442_2 SPFH Band 7 PHB domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 445.0
YHH3_k127_11616442_3 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 430.0
YHH3_k127_11616442_4 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 407.0
YHH3_k127_11616442_5 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 402.0
YHH3_k127_11616442_6 diguanylate cyclase (GGDEF) domain K21025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005441 264.0
YHH3_k127_11616442_7 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000000000005219 216.0
YHH3_k127_11616442_8 Cytochrome P460 - - - 0.000000000000000000000000000000000000000000000000000000002609 203.0
YHH3_k127_11616442_9 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000008827 169.0
YHH3_k127_11687086_0 TIGRFAM Outer membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008089 282.0
YHH3_k127_11747320_0 COG1960 Acyl-CoA dehydrogenases K20035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007095 589.0
YHH3_k127_11747320_1 Electron transfer flavoprotein K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009487 389.0
YHH3_k127_11747320_2 electron transfer flavoprotein beta subunit K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 361.0
YHH3_k127_11771222_0 Diguanylate cyclase K13924 - 2.1.1.80,3.1.1.61 8.459e-250 789.0
YHH3_k127_11771222_1 TIGRFAM filamentous hemagglutinin family N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 414.0
YHH3_k127_11771222_2 Histidine Phosphotransfer domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 322.0
YHH3_k127_11771222_3 Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA K00219 - 1.3.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 296.0
YHH3_k127_11826491_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0 1443.0
YHH3_k127_11826491_1 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1083.0
YHH3_k127_11826491_2 Belongs to the glycosyl hydrolase 13 family - - - 0.000001297 52.0
YHH3_k127_11828505_0 NADH-quinone oxidoreductase K00336 - 1.6.5.3 0.0 1048.0
YHH3_k127_11828505_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 9.81e-304 941.0
YHH3_k127_11828505_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002819 466.0
YHH3_k127_11828505_3 oxidoreductase FAD NAD(P)-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 452.0
YHH3_k127_11828505_4 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007041 434.0
YHH3_k127_11828505_5 toluene tolerance K07323 - - 0.00000000000000000000000000000000000000000000003112 177.0
YHH3_k127_11828505_6 DNA methylase - - - 0.0000000000000000000000000000005088 125.0
YHH3_k127_11835453_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0 1665.0
YHH3_k127_11835453_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 2.779e-268 841.0
YHH3_k127_11835453_10 Iron-sulphur cluster assembly - - - 0.00000000000000000000000007054 107.0
YHH3_k127_11835453_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 493.0
YHH3_k127_11835453_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 482.0
YHH3_k127_11835453_4 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 402.0
YHH3_k127_11835453_5 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008127 361.0
YHH3_k127_11835453_6 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004131 308.0
YHH3_k127_11835453_7 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004747 274.0
YHH3_k127_11835453_8 cyclic-guanylate-specific phosphodiesterase activity - - - 0.00000000000000000000000000000000000000000000000000002244 205.0
YHH3_k127_11835453_9 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000000001143 144.0
YHH3_k127_12021423_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 9.835e-198 625.0
YHH3_k127_12021423_1 Citrate synthase, C-terminal domain K01659 - 2.3.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009123 467.0
YHH3_k127_12021423_2 ROK family K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006832 392.0
YHH3_k127_12021423_3 TIGRFAM filamentous hemagglutinin family N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 399.0
YHH3_k127_12021423_4 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.000000000000000000000000000000000000000000000000000000000000008491 221.0
YHH3_k127_12021423_5 diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family - - - 0.000000000000000000000000000000000000000000000002294 175.0
YHH3_k127_12021423_7 DNA-sulfur modification-associated - - - 0.000000006054 61.0
YHH3_k127_12042491_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 2.192e-197 636.0
YHH3_k127_12042491_1 TIGRFAM general secretion pathway protein F K02455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 522.0
YHH3_k127_12042491_10 Eukaryotic-type carbonic anhydrase K01674 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000005397 250.0
YHH3_k127_12042491_11 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000005704 208.0
YHH3_k127_12042491_12 PFAM Staphylococcal nuclease - - - 0.00000000000000000000000000000000000000000000007747 175.0
YHH3_k127_12042491_13 Prokaryotic diacylglycerol kinase K00901 - 2.7.1.107 0.0000000000000000000000000000000000000000009233 160.0
YHH3_k127_12042491_14 YGGT family K02221 - - 0.00000000000000000000000000000000009593 140.0
YHH3_k127_12042491_15 - - - - 0.000000000000000000000000000000143 124.0
YHH3_k127_12042491_2 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 - 3.1.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000849 514.0
YHH3_k127_12042491_3 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0003824,GO:0004109,GO:0005488,GO:0005515,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0016634,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042802,GO:0042803,GO:0044237,GO:0044249,GO:0044271,GO:0046483,GO:0046983,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 498.0
YHH3_k127_12042491_4 Thymidylate synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000956 464.0
YHH3_k127_12042491_5 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 446.0
YHH3_k127_12042491_6 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 397.0
YHH3_k127_12042491_7 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 323.0
YHH3_k127_12042491_8 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 293.0
YHH3_k127_12042491_9 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000001009 255.0
YHH3_k127_12043545_2 General Secretion Pathway protein K02457 - - 0.000000000000000000000209 100.0
YHH3_k127_12090191_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1186.0
YHH3_k127_12090191_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 8.133e-217 677.0
YHH3_k127_12090191_2 general secretion pathway protein K02455 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0032940,GO:0033036,GO:0042886,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098776 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 548.0
YHH3_k127_12090191_3 photoreceptor activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003357 381.0
YHH3_k127_12090191_4 ABC 3 transport family K02075,K09816 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 353.0
YHH3_k127_12090191_5 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 291.0
YHH3_k127_12090191_6 (C AC39) subunit K02119 - - 0.0000000000000000000000000000000000000000000000000000000000000002457 232.0
YHH3_k127_12090191_7 Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system K09817 - - 0.00000000000000000000000000000000000000000000000000000009152 199.0
YHH3_k127_12090191_8 - - - - 0.00000000000000001083 87.0
YHH3_k127_12090191_9 Protein of unknown function (DUF1284) K09706 - - 0.00000000000001648 83.0
YHH3_k127_12133650_0 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 583.0
YHH3_k127_12133650_1 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.00000000000000000000000000000000000000004677 155.0
YHH3_k127_12177768_0 TrkA-N domain K03499 - - 2.716e-244 759.0
YHH3_k127_12177768_1 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 313.0
YHH3_k127_12177768_2 UPF0114 protein - - - 0.00000000000000000000000000000000000000000000000000000001741 203.0
YHH3_k127_12177768_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.0000000000000000000004941 98.0
YHH3_k127_12177768_4 HIT domain K02503 - - 0.00000000000000001273 83.0
YHH3_k127_12177768_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 GO:0002790,GO:0003674,GO:0005215,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0034613,GO:0042886,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705 - 0.000000000000001003 80.0
YHH3_k127_12177768_6 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.0000000000657 63.0
YHH3_k127_12333723_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 597.0
YHH3_k127_12333723_1 chemotaxis protein K03406,K05874 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 421.0
YHH3_k127_12333723_2 TIGRFAM diguanylate cyclase (GGDEF) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008456 367.0
YHH3_k127_12333723_3 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009867 331.0
YHH3_k127_12333723_4 PFAM secretion protein HlyD - - - 0.0000000000000000000000000000000000000000000000000000000000000534 223.0
YHH3_k127_12333723_5 Protein of unknown function (DUF2939) - - - 0.00000000000000000000000000000006543 131.0
YHH3_k127_12333723_6 Belongs to the UPF0434 family K09791 - - 0.000000000000000000001536 96.0
YHH3_k127_1233710_0 PBS lyase HEAT-like repeat - - - 1.2e-206 675.0
YHH3_k127_1233710_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 593.0
YHH3_k127_1233710_10 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000000000003099 177.0
YHH3_k127_1233710_11 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000025 161.0
YHH3_k127_1233710_12 - - - - 0.00000000000000000000000000000002539 136.0
YHH3_k127_1233710_13 - - - - 0.00000000000000001098 91.0
YHH3_k127_1233710_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 582.0
YHH3_k127_1233710_3 PFAM Binding-protein-dependent transport system inner membrane component K13894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005214 475.0
YHH3_k127_1233710_4 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 455.0
YHH3_k127_1233710_5 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate K03473 - 1.1.1.290 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 391.0
YHH3_k127_1233710_6 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 300.0
YHH3_k127_1233710_7 Methyltransferase, chemotaxis proteins K00575,K13486 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 297.0
YHH3_k127_1233710_8 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000005362 238.0
YHH3_k127_1233710_9 AAA domain - - - 0.00000000000000000000000000000000000000000000000001285 182.0
YHH3_k127_12377282_0 Domain of unknown function (DUF3459) K01236 - 3.2.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 620.0
YHH3_k127_12377282_1 Prephenate dehydrogenase K00210,K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005429 389.0
YHH3_k127_12377282_2 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K18800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 299.0
YHH3_k127_12483091_0 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 1.088e-275 856.0
YHH3_k127_12483091_1 COGs COG3039 Transposase and inactivated derivatives IS5 family K07481 - - 0.00000000000000000000000001677 110.0
YHH3_k127_12483091_2 Transposase K07481 - - 0.000001024 53.0
YHH3_k127_12492925_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 563.0
YHH3_k127_12492925_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 305.0
YHH3_k127_12492925_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000001473 190.0
YHH3_k127_12492925_3 Type II secretion system (T2SS), protein K - - - 0.0000000000000000000000000000000000000006489 162.0
YHH3_k127_12503202_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1047.0
YHH3_k127_12503202_1 PFAM Type II secretion system protein E K02454 - - 8.024e-206 650.0
YHH3_k127_12503202_2 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000006085 234.0
YHH3_k127_12503202_3 Diguanylate cyclase, GGDEF domain K20954 - 2.7.7.65 0.00000000000000000000000000000000000000008779 156.0
YHH3_k127_12507963_0 metallopeptidase activity K01113,K09607 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004056 578.0
YHH3_k127_12507963_1 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 306.0
YHH3_k127_12507963_2 Pfam Tetratricopeptide K07114 - - 0.000000000000000000000000000000003338 147.0
YHH3_k127_12544983_0 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008713 393.0
YHH3_k127_12544983_1 of the cupin superfamily K06995 - - 0.000000000000000000000000000000000002944 138.0
YHH3_k127_12544983_2 AntA/AntB antirepressor K07741 - - 0.00000000000000000000000007589 117.0
YHH3_k127_12544983_3 - - - - 0.0000000000000000000000463 100.0
YHH3_k127_12544983_4 - - - - 0.000000001448 60.0
YHH3_k127_12569912_0 Belongs to the mannose-6-phosphate isomerase type 2 family K00971 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006373 546.0
YHH3_k127_12569912_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 391.0
YHH3_k127_12662952_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 5.301e-244 766.0
YHH3_k127_12662952_1 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 622.0
YHH3_k127_12662952_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006545 507.0
YHH3_k127_12662952_3 Mycolic acid cyclopropane synthetase K13042,K18897 GO:0001505,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006544,GO:0006575,GO:0006577,GO:0006578,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008757,GO:0009058,GO:0009069,GO:0009987,GO:0016740,GO:0016741,GO:0017144,GO:0019286,GO:0019752,GO:0031455,GO:0031456,GO:0032259,GO:0034641,GO:0042133,GO:0042398,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0052729,GO:0065007,GO:0065008,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.1.1.157,2.1.1.161 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004167 452.0
YHH3_k127_12662952_4 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 385.0
YHH3_k127_12662952_5 Mycolic acid cyclopropane synthetase K13042,K18897 GO:0001505,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006544,GO:0006575,GO:0006577,GO:0006578,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008757,GO:0009058,GO:0009069,GO:0009987,GO:0016740,GO:0016741,GO:0017144,GO:0019286,GO:0019752,GO:0031455,GO:0031456,GO:0032259,GO:0034641,GO:0042133,GO:0042398,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0052729,GO:0065007,GO:0065008,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.1.1.157,2.1.1.161 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 361.0
YHH3_k127_12662952_6 glycine betaine K02002 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 357.0
YHH3_k127_12662952_7 - - - - 0.0000000000000000000000000000000000000000000001644 174.0
YHH3_k127_12662952_8 Sporulation related domain - - - 0.0000000000000000000000003552 113.0
YHH3_k127_12669165_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 2.577e-288 896.0
YHH3_k127_12669165_1 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007446 449.0
YHH3_k127_12669165_2 Protein of unknown function (DUF1566) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003193 384.0
YHH3_k127_12669165_3 protein conserved in cyanobacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001237 274.0
YHH3_k127_12669165_4 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000002049 225.0
YHH3_k127_12669165_5 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000000005354 140.0
YHH3_k127_12669165_6 Psort location Extracellular, score 9.64 - - - 0.00000000000000000004526 105.0
YHH3_k127_12669165_7 - - - - 0.0009675 52.0
YHH3_k127_12731762_0 Beta propeller domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 320.0
YHH3_k127_12731762_1 PFAM von Willebrand factor type A domain K02448 - - 0.0000000107 56.0
YHH3_k127_12737081_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 2.655e-242 756.0
YHH3_k127_12737081_1 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 621.0
YHH3_k127_12737081_11 BrnA antitoxin of type II toxin-antitoxin system - - - 0.0007487 45.0
YHH3_k127_12737081_2 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005592 299.0
YHH3_k127_12737081_3 PFAM Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 296.0
YHH3_k127_12737081_4 Wd40 repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002559 285.0
YHH3_k127_12737081_5 Iron--sulfur cluster insertion protein erpA K15724 - - 0.000000000000000000000000000000000000000000000000002075 184.0
YHH3_k127_12737081_6 Thioredoxin-like - - - 0.00000000000000000000000000000000000000001031 159.0
YHH3_k127_12737081_7 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000000000000000000000000005789 127.0
YHH3_k127_12737081_8 membrane protein, required for colicin V production K03558 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009403,GO:0009404,GO:0009987,GO:0016020,GO:0019748,GO:0044237,GO:0044249,GO:0044464,GO:0044550,GO:0071944 - 0.000000000000000002048 91.0
YHH3_k127_12787137_0 - - - - 0.0000000000000000000000000000000000000000008822 169.0
YHH3_k127_12787137_1 COG0616 periplasmic serine proteases (ClpP class) - - - 0.000000000000000000000001668 118.0
YHH3_k127_12787137_2 N-4 methylation of cytosine K00571 - 2.1.1.72 0.000000000000000001129 96.0
YHH3_k127_12787137_3 Phage plasmid primase P4 family K06919 - - 0.000000004444 71.0
YHH3_k127_12787137_5 recombinase activity - - - 0.000003682 55.0
YHH3_k127_1309358_0 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 559.0
YHH3_k127_1309358_1 Type II secretory pathway, component PulD K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 551.0
YHH3_k127_1309358_10 HemX, putative uroporphyrinogen-III C-methyltransferase K02496 - 2.1.1.107 0.00000000000000000000000000007703 128.0
YHH3_k127_1309358_11 enzyme of heme biosynthesis K02498 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000008547 110.0
YHH3_k127_1309358_12 PspA/IM30 family K03969 - - 0.00000000000000000001034 99.0
YHH3_k127_1309358_13 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000147 76.0
YHH3_k127_1309358_14 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000004643 79.0
YHH3_k127_1309358_2 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 434.0
YHH3_k127_1309358_3 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 312.0
YHH3_k127_1309358_5 phosphorelay sensor kinase activity K01768,K02488,K17763 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0042802,GO:0044424,GO:0044464 2.7.7.65,4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000538 272.0
YHH3_k127_1309358_6 Receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000002658 256.0
YHH3_k127_1309358_7 Pfam OmpA - - - 0.00000000000000000000000000000000000000000000000000000000005225 220.0
YHH3_k127_1309358_8 protein transport across the cell outer membrane K02452 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000000000000000000000000000000000000004127 186.0
YHH3_k127_1309358_9 CHAT domain - - - 0.0000000000000000000000000000000000000000002681 165.0
YHH3_k127_1376895_0 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 523.0
YHH3_k127_1376895_1 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 423.0
YHH3_k127_1376895_2 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007958 340.0
YHH3_k127_1376895_3 Bacterial Ig-like domain (group 2) - - - 0.000000000000000003503 96.0
YHH3_k127_1376895_4 oxidoreductase, FAD - - - 0.0000000000005159 70.0
YHH3_k127_1399721_0 Protein of unknown function, DUF255 K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 360.0
YHH3_k127_1399721_1 Histidine kinase - - - 0.00000000000000000000000000000000000005073 146.0
YHH3_k127_1406288_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 548.0
YHH3_k127_1406288_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 455.0
YHH3_k127_1406288_2 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005996 355.0
YHH3_k127_1406288_3 General secretion pathway protein J K02459 - - 0.000000000000000000000000000000000000000000000004689 179.0
YHH3_k127_1406288_4 Thioredoxin - - - 0.0000000000000000000000000000000000000000000001016 171.0
YHH3_k127_1406288_5 NusG domain II - - - 0.000000000000009605 77.0
YHH3_k127_1418048_0 - - - - 0.0 1436.0
YHH3_k127_1418048_1 aromatic hydrocarbon degradation K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009964 528.0
YHH3_k127_1418048_10 Hydrogenase/urease nickel incorporation, metallochaperone, hypA K04651 - - 0.000000000000000000000000000000000002059 140.0
YHH3_k127_1418048_11 Cysteine-rich secretory protein family - - - 0.000000000000000000000000000000000005753 154.0
YHH3_k127_1418048_12 Binds directly to 16S ribosomal RNA K02968 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000189 111.0
YHH3_k127_1418048_13 - - - - 0.0000000000000000000000002701 121.0
YHH3_k127_1418048_14 FimV N-terminal domain protein - - - 0.0000000000000812 83.0
YHH3_k127_1418048_15 - - - - 0.000000000008718 71.0
YHH3_k127_1418048_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007052 513.0
YHH3_k127_1418048_3 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 497.0
YHH3_k127_1418048_4 Amidohydrolase K01686 - 4.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 391.0
YHH3_k127_1418048_5 Short C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000231 261.0
YHH3_k127_1418048_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000002353 229.0
YHH3_k127_1418048_8 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000005945 213.0
YHH3_k127_1418048_9 High frequency lysogenization protein hflD homolog K07153 - - 0.000000000000000000000000000000000000000000000000000000003766 205.0
YHH3_k127_1430334_0 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007549 557.0
YHH3_k127_1430334_1 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004259 445.0
YHH3_k127_1430334_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000006315 181.0
YHH3_k127_1433013_0 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 5.768e-221 702.0
YHH3_k127_1433013_1 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000864 351.0
YHH3_k127_1433013_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000004266 204.0
YHH3_k127_1433013_3 - - - - 0.000000000000000000000000000000000000000000004301 167.0
YHH3_k127_1433013_5 Preprotein translocase SecG subunit K03075 - - 0.000000000000000000000000001357 117.0
YHH3_k127_1433013_6 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K01286,K07258 - 3.4.16.4 0.00000000000000000000000000713 119.0
YHH3_k127_1433013_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03407 - 2.7.13.3 0.0000000000000000000398 90.0
YHH3_k127_1442663_0 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000000000000006671 233.0
YHH3_k127_1442663_1 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000001684 217.0
YHH3_k127_1442663_2 Nucleotidyl transferase - - - 0.00000000000000000001541 93.0
YHH3_k127_1475335_0 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 393.0
YHH3_k127_1475335_1 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 297.0
YHH3_k127_1475335_10 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.0000000000000000000000000000000000000004341 150.0
YHH3_k127_1475335_11 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000000000000000000005975 141.0
YHH3_k127_1475335_12 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000000000000007274 141.0
YHH3_k127_1475335_13 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000002011 123.0
YHH3_k127_1475335_14 Ribosomal protein L30 K02907 - - 0.0000000000000001078 80.0
YHH3_k127_1475335_15 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000006295 55.0
YHH3_k127_1475335_2 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001922 270.0
YHH3_k127_1475335_3 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003695 250.0
YHH3_k127_1475335_4 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000000000000000000000000000078 241.0
YHH3_k127_1475335_5 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000000000000000001736 228.0
YHH3_k127_1475335_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010608,GO:0015935,GO:0016043,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031323,GO:0031329,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043487,GO:0043488,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0061013,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903311,GO:1990904 - 0.00000000000000000000000000000000000000000000000000009347 188.0
YHH3_k127_1475335_7 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000000000000000002366 181.0
YHH3_k127_1475335_8 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000000000003137 162.0
YHH3_k127_1475335_9 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000000002458 157.0
YHH3_k127_1483107_0 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 5.079e-304 937.0
YHH3_k127_1483107_1 oxidoreductase, FAD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004378 411.0
YHH3_k127_1483107_2 LysM domain K01448,K08307,K19223,K22278 - 3.5.1.104,3.5.1.28 0.000000000000000007384 90.0
YHH3_k127_1498349_0 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 8.554e-316 979.0
YHH3_k127_1498349_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit K02118 - - 3.883e-234 731.0
YHH3_k127_1498349_10 Thiamine-binding protein - - - 0.000000000000000000000000000000000000000000002005 166.0
YHH3_k127_1498349_11 Las17-binding protein actin regulator - - - 0.000003662 56.0
YHH3_k127_1498349_2 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 2.783e-233 726.0
YHH3_k127_1498349_3 tRNA binding K04566 - 6.1.1.6 1.14e-230 728.0
YHH3_k127_1498349_4 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.503e-214 672.0
YHH3_k127_1498349_5 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005992 515.0
YHH3_k127_1498349_6 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005531 476.0
YHH3_k127_1498349_7 3'(2'),5'-bisphosphate nucleotidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005846 355.0
YHH3_k127_1498349_8 CorA-like Mg2+ transporter protein K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 319.0
YHH3_k127_1498349_9 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000000002199 215.0
YHH3_k127_1511828_0 Penicillin-Binding Protein C-terminus Family - - - 6.582e-294 918.0
YHH3_k127_1511828_1 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 8.591e-247 782.0
YHH3_k127_1511828_2 FES K03575 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000001239 224.0
YHH3_k127_1511828_3 hemerythrin-like metal-binding K07216 - - 0.0000000000000000000000000000000000000000000000000000006969 196.0
YHH3_k127_1511828_4 Domain of unknown function DUF29 - - - 0.00000000000000000000000000000000006252 138.0
YHH3_k127_1511828_5 Dinitrogenase iron-molybdenum cofactor - - - 0.000000000000000000000000000000004042 130.0
YHH3_k127_1511828_6 PilZ domain - - - 0.0000000000000000009908 90.0
YHH3_k127_1524098_0 ATPsynthase alpha/beta subunit N-term extension K02117 - 3.6.3.14,3.6.3.15 1.473e-268 837.0
YHH3_k127_1524098_1 Exonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003752 613.0
YHH3_k127_1524098_10 Surface antigen variable number K07278 - - 0.000000000000000000000000000004231 120.0
YHH3_k127_1524098_2 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007947 374.0
YHH3_k127_1524098_3 Trypsin-like serine protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004008 255.0
YHH3_k127_1524098_4 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family - - - 0.000000000000000000000000000000000000000000000000000000000000000006067 248.0
YHH3_k127_1524098_5 PFAM Response regulator receiver domain K07689 - - 0.00000000000000000000000000000000000000000000000000000000000002038 220.0
YHH3_k127_1524098_6 PFAM Exonuclease RNase T and DNA polymerase III - - - 0.00000000000000000000000000000000000000000000000005928 182.0
YHH3_k127_1524098_7 Histidine kinase K07675 - 2.7.13.3 0.0000000000000000000000000000000000000000000000003008 197.0
YHH3_k127_1524098_8 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000001482 173.0
YHH3_k127_1524098_9 V-type proton ATPase subunit E K02121 - - 0.00000000000000000000000000000000001043 143.0
YHH3_k127_154499_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 2.843e-216 685.0
YHH3_k127_154499_1 Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004696 425.0
YHH3_k127_154499_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000003651 231.0
YHH3_k127_154499_3 TerD domain - - - 0.0000000000000000000000000000000000000001593 156.0
YHH3_k127_154499_4 - - - - 0.000000000000000008451 94.0
YHH3_k127_155406_0 Belongs to the glycosyl hydrolase 43 family - - - 0.00000000000000000000000000000000000000000004212 187.0
YHH3_k127_155406_1 - - - - 0.00000000000000000000000003415 128.0
YHH3_k127_155406_2 Endoglucanase K01179 - 3.2.1.4 0.00000000000000000000000007787 127.0
YHH3_k127_155406_3 Peptidase C14 caspase catalytic subunit p20 - - - 0.00001951 59.0
YHH3_k127_1572156_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004296 450.0
YHH3_k127_161808_0 Type II and III secretion system protein K02453 - - 2.508e-223 711.0
YHH3_k127_161808_1 COG2104 Sulfur transfer protein involved in thiamine biosynthesis K03154 - - 0.000000000000846 68.0
YHH3_k127_1667274_0 Domain of unknown function (DUF3459) K00700,K01236 - 2.4.1.18,3.2.1.141 0.00002354 48.0
YHH3_k127_1667274_1 PFAM Hemolysin-type calcium-binding repeat (2 copies) - - - 0.0005701 51.0
YHH3_k127_170254_0 Cytochrome c-type biogenesis protein CcmF C-terminal - - - 1.002e-287 893.0
YHH3_k127_170254_1 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015886,GO:0016020,GO:0016043,GO:0017003,GO:0017004,GO:0017006,GO:0018063,GO:0019538,GO:0020037,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046906,GO:0048037,GO:0051179,GO:0051181,GO:0051234,GO:0065003,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0097159,GO:0098552,GO:0098567,GO:1901363,GO:1901564,GO:1901678 - 0.000000000000000000000000000000000000000000000000001422 186.0
YHH3_k127_170254_2 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009898,GO:0015886,GO:0016020,GO:0031224,GO:0031226,GO:0031235,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051181,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098552,GO:0098562,GO:1901678 - 0.000000000006779 67.0
YHH3_k127_1724597_0 Domain of unknown function DUF29 - - - 0.000000000000000000000000000000000000000000000000006243 185.0
YHH3_k127_1724597_1 phosphatase, C-terminal domain of histone macro H2A1 like protein - - - 0.000000000000000000000000000000000000000000000001167 185.0
YHH3_k127_1724597_2 membrane - - - 0.000000000000008309 80.0
YHH3_k127_1772714_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 507.0
YHH3_k127_1772714_1 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 503.0
YHH3_k127_1772714_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 365.0
YHH3_k127_1772714_3 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001325 273.0
YHH3_k127_1772714_4 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02461 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007931 263.0
YHH3_k127_1772714_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000006295 117.0
YHH3_k127_181189_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 474.0
YHH3_k127_181189_1 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000158 247.0
YHH3_k127_181189_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000006171 88.0
YHH3_k127_181189_3 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000003353 60.0
YHH3_k127_1813821_0 methyl-accepting chemotaxis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000412 404.0
YHH3_k127_1813821_1 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005488 307.0
YHH3_k127_1837016_0 Cytochrome C oxidase, cbb3-type, subunit III K17222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 538.0
YHH3_k127_1837016_1 Belongs to the EPSP synthase family. MurA subfamily K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007852 484.0
YHH3_k127_1837016_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 388.0
YHH3_k127_1837016_3 COG2199 FOG GGDEF domain K18968 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0052621 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000001166 237.0
YHH3_k127_1837016_4 LRR receptor-like serine threonine-protein kinase K04733 - 2.7.11.1 0.0000000000000000000000000000000000000000000000005925 183.0
YHH3_k127_1837016_5 hydrogenase maturation protease - - - 0.0000000000000000000000000000000000000000000008325 171.0
YHH3_k127_1854584_0 ABC-type oligopeptide transport system, periplasmic component K02035,K13893 GO:0005575,GO:0005623,GO:0006810,GO:0006857,GO:0008150,GO:0015833,GO:0015893,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042493,GO:0042597,GO:0042884,GO:0042886,GO:0042891,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 2.107e-245 771.0
YHH3_k127_1854584_1 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007049 529.0
YHH3_k127_1854584_10 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000015 126.0
YHH3_k127_1854584_11 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02462 GO:0008150,GO:0009405,GO:0044419,GO:0051704 - 0.00000000000000000000002925 105.0
YHH3_k127_1854584_12 PFAM Di-glucose binding within endoplasmic reticulum - - - 0.0000000000000000001005 93.0
YHH3_k127_1854584_13 cyclic nucleotide binding K04739,K10914 - - 0.00000000000001236 89.0
YHH3_k127_1854584_14 cyclic nucleotide binding K00384,K04739,K07001,K10914 - 1.8.1.9 0.0000000000002703 84.0
YHH3_k127_1854584_2 ABC-type branched-chain amino acid transport system, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 518.0
YHH3_k127_1854584_3 PFAM mce related protein K06192 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 390.0
YHH3_k127_1854584_4 ABC-type branched-chain amino acid transport system, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 402.0
YHH3_k127_1854584_5 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009859 370.0
YHH3_k127_1854584_6 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 354.0
YHH3_k127_1854584_7 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000002619 235.0
YHH3_k127_1854584_8 paraquat-inducible protein A K03808 - - 0.0000000000000000000000000000000000000000000000000000000000000001372 225.0
YHH3_k127_1854584_9 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000008723 159.0
YHH3_k127_1860538_0 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 356.0
YHH3_k127_1860538_1 oxidase subunit - - - 0.0000000000000000000000000000000000000000005124 162.0
YHH3_k127_1860538_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000003246 119.0
YHH3_k127_1875606_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003818 306.0
YHH3_k127_1875606_1 protein serine/threonine phosphatase activity - - - 0.0000000000000000000000251 105.0
YHH3_k127_1883883_0 TIGRFAM Outer membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009263 440.0
YHH3_k127_1883883_1 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000000000000000000000000000000000001412 255.0
YHH3_k127_1883883_2 Fibronectin type 3 domain K12685,K16785,K16786,K16787 - - 0.0000000000000000000000000000000000000000000001531 196.0
YHH3_k127_1883883_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000002209 149.0
YHH3_k127_1883883_4 COG0839 NADH ubiquinone oxidoreductase subunit 6 (chain J) K00339 - 1.6.5.3 0.0000000000000000000000000003253 120.0
YHH3_k127_1883883_5 Large extracellular alpha-helical protein - - - 0.0000001181 67.0
YHH3_k127_1883883_6 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 - 3.2.1.4 0.000000269 66.0
YHH3_k127_1883883_7 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0004591 45.0
YHH3_k127_1909382_0 Type II IV secretion system protein K02652 - - 3.274e-249 775.0
YHH3_k127_1909382_1 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004691 552.0
YHH3_k127_1909382_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004 507.0
YHH3_k127_1909382_3 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002931 363.0
YHH3_k127_1909382_4 PGAP1-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008423 286.0
YHH3_k127_1909382_5 acid phosphatase activity K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000001031 223.0
YHH3_k127_1909382_6 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.000000000000000000000000000000000000000000000000000006298 200.0
YHH3_k127_1909382_7 Chitinase class I - - - 0.0000000000000000000000000000000000000000006518 165.0
YHH3_k127_1909382_8 DoxX K15977 - - 0.000000000000000000000000000000005295 131.0
YHH3_k127_1909382_9 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.00000000000000000000000000001672 134.0
YHH3_k127_1923434_0 alpha-glucan phosphorylase K00688 - 2.4.1.1 9.896e-296 930.0
YHH3_k127_1923434_1 Peptidase family C25 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 366.0
YHH3_k127_1923434_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02487,K06596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 299.0
YHH3_k127_1923434_3 PFAM acylphosphatase K01512 - 3.6.1.7 0.0000000000000000000000127 102.0
YHH3_k127_1923434_4 Large extracellular alpha-helical protein K06894 - - 0.00000000000004648 83.0
YHH3_k127_1923434_5 - - - - 0.000000008755 60.0
YHH3_k127_1963795_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 3.083e-202 643.0
YHH3_k127_2033843_0 Glucose inhibited division protein A K03388,K16885 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 2.791e-213 669.0
YHH3_k127_2033843_1 Methyl-viologen-reducing hydrogenase, delta subunit K16886 - - 0.0000000000000000000000000000000000000000000000001479 180.0
YHH3_k127_2033843_2 - - - - 0.00000000000000000006409 105.0
YHH3_k127_2045317_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.358e-279 865.0
YHH3_k127_2045317_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 452.0
YHH3_k127_2045317_10 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001261 260.0
YHH3_k127_2045317_11 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000000008321 238.0
YHH3_k127_2045317_12 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000002941 226.0
YHH3_k127_2045317_13 oxidase assembly K02258 - - 0.000000000000000000000000000000000000000000000000000007296 195.0
YHH3_k127_2045317_14 Integral membrane protein (DUF2244) - - - 0.000000000000000000000001207 109.0
YHH3_k127_2045317_15 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000004217 99.0
YHH3_k127_2045317_16 COG2755 Lysophospholipase L1 and related esterases - - - 0.00005272 48.0
YHH3_k127_2045317_2 Membrane bound O-acyl transferase, MBOAT family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 453.0
YHH3_k127_2045317_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 441.0
YHH3_k127_2045317_4 PFAM cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 364.0
YHH3_k127_2045317_5 O-antigen ligase like membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006135 362.0
YHH3_k127_2045317_6 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 304.0
YHH3_k127_2045317_7 Catalyzes the synthesis of activated sulfate K00860,K00958 - 2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 296.0
YHH3_k127_2045317_8 PFAM Leucine Rich Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003548 304.0
YHH3_k127_2045317_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007109 313.0
YHH3_k127_208348_0 GTP1/OBG K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 443.0
YHH3_k127_208348_1 Thiazole biosynthesis protein ThiG K02371 - 1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 440.0
YHH3_k127_208348_2 glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000009625 153.0
YHH3_k127_2091334_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0 1268.0
YHH3_k127_2091334_1 Citrate transporter - - - 1.128e-239 756.0
YHH3_k127_2091334_10 phage Tail Collar - - - 0.00000000000000000000000000000000000000000000000000000000000009617 224.0
YHH3_k127_2091334_11 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000003638 190.0
YHH3_k127_2091334_12 Type II transport protein GspH - - - 0.000000000000003763 82.0
YHH3_k127_2091334_13 TIGRFAM transposase, IS605 OrfB K07496 - - 0.000004037 52.0
YHH3_k127_2091334_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 1.391e-204 652.0
YHH3_k127_2091334_3 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007899 596.0
YHH3_k127_2091334_4 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009217 572.0
YHH3_k127_2091334_5 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 508.0
YHH3_k127_2091334_6 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 466.0
YHH3_k127_2091334_7 SMART Tetratricopeptide domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 333.0
YHH3_k127_2091334_8 Peptidase M50B-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005073 268.0
YHH3_k127_2091334_9 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000000000000000000000005263 246.0
YHH3_k127_2126477_0 CHAT domain - - - 3.118e-199 645.0
YHH3_k127_2126477_1 ion channel K05802 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 617.0
YHH3_k127_2126477_10 - - - - 0.00000000000000005504 82.0
YHH3_k127_2126477_11 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.0000005898 53.0
YHH3_k127_2126477_2 Domain of unknown function DUF11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006296 411.0
YHH3_k127_2126477_3 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000001477 186.0
YHH3_k127_2126477_4 Peptidase family M48 - - - 0.000000000000000000000000000007217 130.0
YHH3_k127_2126477_5 Fibronectin type 3 domain K12685,K16785,K16786,K16787 - - 0.00000000000000000000000000001355 139.0
YHH3_k127_2126477_6 guanyl-nucleotide exchange factor activity K01387,K07114,K12287 - 3.4.24.3 0.000000000000000000000002401 122.0
YHH3_k127_2126477_7 Antirepressor K07741 - - 0.00000000000000000000003905 106.0
YHH3_k127_2126477_9 Putative restriction endonuclease - - - 0.00000000000000002405 87.0
YHH3_k127_2135858_0 Histidine kinase - - - 3.548e-287 933.0
YHH3_k127_2135858_1 belongs to the aldehyde dehydrogenase family K22445 - 1.2.99.10 0.000000000000000000000000000000000002254 141.0
YHH3_k127_2135858_2 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.000000000000000000000000000004134 126.0
YHH3_k127_2135858_3 CHAT domain - - - 0.00000000000000001371 91.0
YHH3_k127_2135858_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000004773 76.0
YHH3_k127_2135858_5 Domain of unknown function (DUF4351) - - - 0.00000000006293 64.0
YHH3_k127_2242687_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 585.0
YHH3_k127_2242687_1 PFAM Transposase, IS605 OrfB, C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 557.0
YHH3_k127_2242687_2 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 388.0
YHH3_k127_2242687_3 von Willebrand factor, type A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 360.0
YHH3_k127_2242687_4 PFAM von Willebrand factor type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 307.0
YHH3_k127_2242687_5 Redoxin - - - 0.0000000000000000000000000000000000000000000000000003935 185.0
YHH3_k127_2242687_6 Domain of unknown function (DUF4381) - - - 0.000000000000000000000000000000000000009791 151.0
YHH3_k127_2242687_7 nucleic acid-binding protein contains PIN domain - - - 0.000000000000000000007719 95.0
YHH3_k127_2242687_8 - - - - 0.0000000000000677 83.0
YHH3_k127_2242687_9 Protein of unknown function (DUF433) - - - 0.00005418 46.0
YHH3_k127_2270690_0 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 468.0
YHH3_k127_2270690_1 NAD-dependent epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000005323 138.0
YHH3_k127_2270690_2 - - - - 0.000000000000000000000000000000003075 132.0
YHH3_k127_2270690_3 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000003862 135.0
YHH3_k127_2270690_4 - - - - 0.0000000001101 64.0
YHH3_k127_227959_0 response regulator - - - 6.435e-235 732.0
YHH3_k127_227959_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 1.112e-233 736.0
YHH3_k127_227959_10 CcmB protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 383.0
YHH3_k127_227959_11 Serine phosphatase RsbU, regulator of sigma subunit K07315,K07716,K17763 - 2.7.13.3,3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006239 349.0
YHH3_k127_227959_12 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 304.0
YHH3_k127_227959_13 undecaprenyl-phosphate glucose phosphotransferase activity K05946,K13657,K13660,K21303 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009987,GO:0016051,GO:0016740,GO:0016772,GO:0016780,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0046402,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.4.1.187,2.4.1.252,2.7.8.40 0.00000000000000000000000000000000000000000000000000000000000000000000000006665 257.0
YHH3_k127_227959_14 Specifically methylates the guanosine in position 1516 of 16S rRNA K15984 - 2.1.1.242 0.00000000000000000000000000000000000000000000000000000000000000000000006984 249.0
YHH3_k127_227959_15 Domain of unknown function (DUF4340) - - - 0.00000000000000000000000000000000000000000000000000000000000000002103 238.0
YHH3_k127_227959_16 - - - - 0.000000000000000000000000000000000000000000000000000006051 195.0
YHH3_k127_227959_17 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000000000003393 183.0
YHH3_k127_227959_18 Outer membrane lipoprotein K06077 - - 0.000000000000000000000000000000000000000000000001399 178.0
YHH3_k127_227959_19 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K01921,K03589 GO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0031224,GO:0031226,GO:0032153,GO:0032505,GO:0032506,GO:0042802,GO:0043093,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0071944,GO:0090529,GO:1902410,GO:1903047 6.3.2.4 0.0000000000000000000000000000000000002147 150.0
YHH3_k127_227959_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 1.516e-231 720.0
YHH3_k127_227959_20 TIGRFAM Phosphotransferase System HPr (HPr) Family K11189 - - 0.0000000000000000000000000000001048 127.0
YHH3_k127_227959_21 COGs COG5439 conserved - - - 0.000000000000000000000000001143 115.0
YHH3_k127_227959_22 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.00000000005928 70.0
YHH3_k127_227959_23 PFAM Pentapeptide repeats (8 copies) - - - 0.000539 43.0
YHH3_k127_227959_3 PFAM Pyridoxal-dependent decarboxylase K01580 - 4.1.1.15 8.111e-229 721.0
YHH3_k127_227959_4 Gliding motility protein GldG - - - 2.438e-214 682.0
YHH3_k127_227959_5 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005756 466.0
YHH3_k127_227959_6 Glycosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 462.0
YHH3_k127_227959_7 ABC transporter, ATP-binding protein K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 441.0
YHH3_k127_227959_8 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007442 402.0
YHH3_k127_227959_9 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 404.0
YHH3_k127_2281573_0 COG3209 Rhs family protein K11021 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 397.0
YHH3_k127_2329557_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 3.846e-289 904.0
YHH3_k127_2329557_1 Alpha amylase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006922 537.0
YHH3_k127_2329557_10 Histidine kinase-like ATPase domain - - - 0.0000000000000000000000000004516 119.0
YHH3_k127_2329557_11 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 - - 0.00000000000000000000000003693 111.0
YHH3_k127_2329557_12 pilus assembly protein, PilZ - - - 0.00000000000000000001116 96.0
YHH3_k127_2329557_13 Belongs to the UPF0235 family K09131 - - 0.00000000000000000002106 94.0
YHH3_k127_2329557_14 PFAM FeoA K04758 - - 0.0000000000001281 74.0
YHH3_k127_2329557_15 Lysozyme inhibitor LprI - - - 0.000001913 57.0
YHH3_k127_2329557_2 Nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 505.0
YHH3_k127_2329557_3 Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)- (lauroyl)-lipid IV(A) K02517,K12974 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006082,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0006950,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008951,GO:0009058,GO:0009245,GO:0009247,GO:0009266,GO:0009311,GO:0009312,GO:0009409,GO:0009628,GO:0009987,GO:0016020,GO:0016051,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0019752,GO:0036103,GO:0036104,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046467,GO:0046493,GO:0050896,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.241,2.3.1.242 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002513 286.0
YHH3_k127_2329557_4 Protein of unknown function DUF86 - - - 0.0000000000000000000000000000000000000000000000101 177.0
YHH3_k127_2329557_5 pilus assembly protein, PilZ - - - 0.00000000000000000000000000000000000000000001458 165.0
YHH3_k127_2329557_6 MazG-like family - - - 0.0000000000000000000000000000000000000003864 151.0
YHH3_k127_2329557_7 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000000000000000000000000000004645 128.0
YHH3_k127_2329557_8 DNA polymerase - - - 0.00000000000000000000000000000008818 129.0
YHH3_k127_2329557_9 PFAM Ferrous iron transporter, FeoA subunit K04758 - - 0.0000000000000000000000000002665 115.0
YHH3_k127_2334745_0 Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate K07516 - 1.1.1.35 7.286e-309 966.0
YHH3_k127_2334745_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 2.02e-257 803.0
YHH3_k127_2334745_2 Belongs to the thiolase family K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 523.0
YHH3_k127_2334745_3 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003973 417.0
YHH3_k127_2334745_4 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005031 406.0
YHH3_k127_2334745_5 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 342.0
YHH3_k127_2334745_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002653 265.0
YHH3_k127_2334745_7 Pfam ABC - - - 0.000000000000000000000000000000000000000000000000000000000335 211.0
YHH3_k127_2334745_8 membrane - - - 0.0000000000000000000000000000003208 124.0
YHH3_k127_2334745_9 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.0007844 42.0
YHH3_k127_2366705_0 TonB-dependent Receptor Plug K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 532.0
YHH3_k127_2366705_1 COG0618 Exopolyphosphatase-related proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008916 482.0
YHH3_k127_2366705_10 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0030674,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0042221,GO:0042802,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045203,GO:0045229,GO:0046677,GO:0050896,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0060090,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.000000000000000000000000001979 114.0
YHH3_k127_2366705_11 PFAM Transposase, IS605 OrfB, C-terminal - - - 0.00000000000002002 74.0
YHH3_k127_2366705_12 Protein of unknown function (DUF2909) - - - 0.0000000006684 64.0
YHH3_k127_2366705_2 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004848 473.0
YHH3_k127_2366705_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 333.0
YHH3_k127_2366705_4 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005109 277.0
YHH3_k127_2366705_5 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005058 250.0
YHH3_k127_2366705_6 Domain of unknown function (DUF368) K08974 - - 0.00000000000000000000000000000000000000000000000000000000000000000001482 244.0
YHH3_k127_2366705_7 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000007953 235.0
YHH3_k127_2366705_8 Belongs to the phosphoglycerate mutase family K15634 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000006306 211.0
YHH3_k127_2366705_9 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000000000000000000000000062 176.0
YHH3_k127_2446609_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046429,GO:0046490,GO:0046872,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 561.0
YHH3_k127_2446609_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007493 423.0
YHH3_k127_2446609_2 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005478 289.0
YHH3_k127_2446609_3 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000002807 228.0
YHH3_k127_2446609_4 TIGRFAM type IV pilus biogenesis stability protein PilW K02656 - - 0.0000000000000000000000000000000000000000000000000000000000000007353 227.0
YHH3_k127_2446609_5 Domain of unknown function (DUF4115) K15539 - - 0.00000000000000000000000000000000000000004227 168.0
YHH3_k127_2446609_6 - - - - 0.0000000000000000000000000000000000213 139.0
YHH3_k127_2446609_7 RRXRR protein - - - 0.0000000000000000002331 90.0
YHH3_k127_2446609_8 Transposase - - - 0.00000000001892 67.0
YHH3_k127_2446609_9 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.00000418 49.0
YHH3_k127_2457836_0 TIGRFAM FimV C-terminal domain K08086 - - 0.000000000000000000000000000000000000000000001951 188.0
YHH3_k127_2457836_1 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000009188 115.0
YHH3_k127_2457836_2 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16785 - - 0.0000000009194 67.0
YHH3_k127_2479796_0 Large extracellular alpha-helical protein K06894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006686 276.0
YHH3_k127_2492860_0 Glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 1064.0
YHH3_k127_2492860_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007098 399.0
YHH3_k127_2492860_3 - - - - 0.00000000003579 66.0
YHH3_k127_2492860_4 methyl-accepting chemotaxis protein K03406 - - 0.000003657 55.0
YHH3_k127_2497079_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 4.405e-295 915.0
YHH3_k127_2497079_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 9.941e-253 784.0
YHH3_k127_2497079_10 Transposase, IS605 OrfB family K07496 - - 0.000000000000003576 77.0
YHH3_k127_2497079_11 - - - - 0.0000000000000123 88.0
YHH3_k127_2497079_12 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00006045 46.0
YHH3_k127_2497079_2 Receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007874 577.0
YHH3_k127_2497079_3 argininosuccinate lyase K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000469 494.0
YHH3_k127_2497079_4 TonB-dependent Receptor Plug K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 501.0
YHH3_k127_2497079_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006153 445.0
YHH3_k127_2497079_6 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000000000000000000000000000002161 197.0
YHH3_k127_2497079_7 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000000000000000000009283 169.0
YHH3_k127_2497079_8 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000007895 130.0
YHH3_k127_2497079_9 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000000002289 121.0
YHH3_k127_2535194_0 TIGRFAM amino acid adenylation domain - - - 3.754e-194 631.0
YHH3_k127_2539033_0 Belongs to the PdxA family K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 314.0
YHH3_k127_2539033_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001373 256.0
YHH3_k127_2539033_2 PFAM Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000014 232.0
YHH3_k127_2539033_3 - - - - 0.00000000000000000000000000000000000000000000001989 175.0
YHH3_k127_2542894_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003306 576.0
YHH3_k127_2542894_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008085 512.0
YHH3_k127_2542894_10 Belongs to the CinA family K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000001455 190.0
YHH3_k127_2542894_11 PFAM PilZ domain K02676 - - 0.0000000000000000000000000000000000000009973 150.0
YHH3_k127_2542894_12 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000000002701 135.0
YHH3_k127_2542894_14 Modulates RecA activity K03565 - - 0.000000000000000000000000000005762 124.0
YHH3_k127_2542894_16 VanZ like family - - - 0.000000000000000000000001608 107.0
YHH3_k127_2542894_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 474.0
YHH3_k127_2542894_3 Cache domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 433.0
YHH3_k127_2542894_4 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 349.0
YHH3_k127_2542894_5 Hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 336.0
YHH3_k127_2542894_6 TIGRFAM DNA polymerase III, delta K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 340.0
YHH3_k127_2542894_7 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005073 291.0
YHH3_k127_2542894_8 Protein of unknown function, DUF484 K09921 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002654 276.0
YHH3_k127_2542894_9 Hydrogenase maturation protease K03605 - - 0.00000000000000000000000000000000000000000000000000000000000002039 218.0
YHH3_k127_2566774_0 PFAM YicC-like family, N-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 326.0
YHH3_k127_2566774_1 TIGRFAM hydrogenase assembly chaperone hypC hupF K04653 - - 0.000000000000000000000000000001135 122.0
YHH3_k127_2566774_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.000000000000000000000000208 105.0
YHH3_k127_2566774_3 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013,K15509 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23,1.1.1.308 0.000001031 59.0
YHH3_k127_2602852_0 TIGRFAM type IV pilus secretin (or competence protein) PilQ K02666 - - 5.37e-219 701.0
YHH3_k127_2602852_1 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 322.0
YHH3_k127_2602852_2 PFAM Pilus assembly protein PilP K02665 - - 0.0000000000000000000000000000002301 129.0
YHH3_k127_2637521_0 Histidine kinase - - - 1.14e-258 818.0
YHH3_k127_2637521_1 homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008768 610.0
YHH3_k127_2637521_2 response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004048 522.0
YHH3_k127_2637521_3 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 412.0
YHH3_k127_2637521_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 369.0
YHH3_k127_2637521_5 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000009335 237.0
YHH3_k127_2637521_6 PFAM Aminotransferase class I and II K14261 - - 0.0000000000000000000000000000009527 121.0
YHH3_k127_2637521_7 Domain of unknown function (DUF4390) - - - 0.00000000000000000000000000007355 124.0
YHH3_k127_2637521_8 - - - - 0.000000000000000000000001781 107.0
YHH3_k127_2723933_0 PFAM binding-protein-dependent transport systems inner membrane component K02037 - - 1.659e-274 863.0
YHH3_k127_2723933_1 TIGRFAM phosphate binding protein K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007715 443.0
YHH3_k127_2723933_2 KilA-N - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005488 278.0
YHH3_k127_2723933_3 PFAM Binding-protein-dependent transport system inner membrane component K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000008717 231.0
YHH3_k127_2723933_4 PFAM Uncharacterised protein family UPF0150 - - - 0.0000000000000000001261 89.0
YHH3_k127_2723933_5 mRNA binding K07339 - - 0.0000000000000000161 82.0
YHH3_k127_2740562_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1270.0
YHH3_k127_2740562_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 6.26e-256 801.0
YHH3_k127_2740562_10 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 316.0
YHH3_k127_2740562_11 UDP-N-acetylglucosamine 2-epimerase activity K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006176 308.0
YHH3_k127_2740562_12 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000001166 236.0
YHH3_k127_2740562_13 COG2755 Lysophospholipase L1 and related esterases K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000001784 215.0
YHH3_k127_2740562_14 Preprotein translocase, YajC subunit K03210 - - 0.0000000000000000000000000000000000000000000959 162.0
YHH3_k127_2740562_15 CHAP domain containing protein - - - 0.0000000000000000000000000000000007312 138.0
YHH3_k127_2740562_16 GTP binding - - - 0.00000000000000000000000000000000435 138.0
YHH3_k127_2740562_17 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000000006647 125.0
YHH3_k127_2740562_18 Planctomycete cytochrome C - - - 0.000000000000000000000000000001079 126.0
YHH3_k127_2740562_19 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016071,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031123,GO:0031124,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000008528 120.0
YHH3_k127_2740562_2 Belongs to the GPI family K01810 - 5.3.1.9 1.572e-239 751.0
YHH3_k127_2740562_21 capsule polysaccharide biosynthetic process - - - 0.000000000001147 81.0
YHH3_k127_2740562_22 PFAM Transposase, IS605 OrfB, C-terminal - - - 0.00000006157 55.0
YHH3_k127_2740562_23 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.000001295 63.0
YHH3_k127_2740562_3 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 2.769e-213 672.0
YHH3_k127_2740562_4 PFAM FIST C domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 453.0
YHH3_k127_2740562_5 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004397 395.0
YHH3_k127_2740562_6 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005039 386.0
YHH3_k127_2740562_7 PFAM SPFH domain Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008028 364.0
YHH3_k127_2740562_8 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009477 359.0
YHH3_k127_2740562_9 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 334.0
YHH3_k127_2826640_0 His Kinase A (phosphoacceptor) domain - - - 3.602e-253 799.0
YHH3_k127_2826640_1 Domain of Unknown Function (DUF349) - - - 9.977e-236 762.0
YHH3_k127_2826640_10 Sulfotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000016 259.0
YHH3_k127_2826640_11 Sulfatase K01130 - 3.1.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000452 260.0
YHH3_k127_2826640_12 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000000000006454 209.0
YHH3_k127_2826640_13 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.0000000000000000000000000000000000000000000000000000000001175 209.0
YHH3_k127_2826640_14 Domain of unknown function DUF29 - - - 0.0000000000000000000000000000000000000000000000000000004875 196.0
YHH3_k127_2826640_15 Tetratricopeptide repeat-like domain - - - 0.0000000000000000000000000000000000000000000000001545 185.0
YHH3_k127_2826640_16 Protein of unknown function (DUF98) K03181 - 4.1.3.40 0.000000000000000000000000000000000000000007524 161.0
YHH3_k127_2826640_17 Domain of unknown function (DUF4160) - - - 0.00000000000000000000000000000000006037 136.0
YHH3_k127_2826640_18 Protein of unknown function (DUF2442) - - - 0.0000000000000000000000000000000001943 133.0
YHH3_k127_2826640_19 Domain of unknown function (DUF4258) - - - 0.0000000000000000000000000000000002674 134.0
YHH3_k127_2826640_2 Filamentation induced by cAMP protein fic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 599.0
YHH3_k127_2826640_20 identical protein binding - - - 0.00000000000000000000000001097 124.0
YHH3_k127_2826640_21 PIN domain - - - 0.000000000000000000000001447 107.0
YHH3_k127_2826640_22 PFAM plasmid K06218 - - 0.0000000000000000000002282 100.0
YHH3_k127_2826640_23 TIGRFAM YgiT-type zinc finger domain - - - 0.000000000000000000005701 93.0
YHH3_k127_2826640_24 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 0.000000000000000001384 87.0
YHH3_k127_2826640_26 Addiction module toxin, RelE StbE family - - - 0.00000001265 57.0
YHH3_k127_2826640_27 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000003652 55.0
YHH3_k127_2826640_3 Transposase, IS605 OrfB family K07496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 422.0
YHH3_k127_2826640_4 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 394.0
YHH3_k127_2826640_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 387.0
YHH3_k127_2826640_6 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 396.0
YHH3_k127_2826640_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003662 370.0
YHH3_k127_2826640_8 Phosphopantetheine attachment site - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 296.0
YHH3_k127_2826640_9 phosphoprotein phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006019 284.0
YHH3_k127_2863474_0 Two component regulator propeller K19694 - - 2.703e-321 1034.0
YHH3_k127_2863474_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - 4.734e-222 704.0
YHH3_k127_2863474_11 - - - - 0.000008878 56.0
YHH3_k127_2863474_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004607 437.0
YHH3_k127_2863474_3 Glycosyltransferase like family 2 K20444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 417.0
YHH3_k127_2863474_4 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007769 392.0
YHH3_k127_2863474_5 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582 - 3.1.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000003076 255.0
YHH3_k127_2863474_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001797 239.0
YHH3_k127_2863474_7 PFAM Cysteine-rich secretory protein family - - - 0.000000000000000000000000000000000000000000000000000000004947 205.0
YHH3_k127_2863474_8 protein conserved in bacteria K09938 - - 0.00000000000000000000000000000000000000000123 170.0
YHH3_k127_2863474_9 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000000000131 142.0
YHH3_k127_2951144_0 AMP-binding enzyme C-terminal domain K01897 GO:0001676,GO:0003674,GO:0003824,GO:0004467,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006163,GO:0006629,GO:0006631,GO:0006635,GO:0006637,GO:0006644,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009056,GO:0009058,GO:0009062,GO:0009117,GO:0009150,GO:0009259,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009898,GO:0009987,GO:0015645,GO:0016020,GO:0016042,GO:0016054,GO:0016405,GO:0016874,GO:0016877,GO:0016878,GO:0019395,GO:0019637,GO:0019693,GO:0019752,GO:0030258,GO:0031406,GO:0032787,GO:0033293,GO:0033865,GO:0033875,GO:0034032,GO:0034440,GO:0034641,GO:0035383,GO:0036041,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046395,GO:0046483,GO:0050896,GO:0051186,GO:0055086,GO:0055114,GO:0070538,GO:0071704,GO:0071944,GO:0072329,GO:0072521,GO:0090407,GO:0098552,GO:0098562,GO:1901135,GO:1901360,GO:1901564,GO:1901575,GO:1901576 6.2.1.3 3.774e-241 756.0
YHH3_k127_2951144_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004885 539.0
YHH3_k127_2951144_10 PFAM Cobyrinic acid a,c-diamide synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000184 258.0
YHH3_k127_2951144_12 chlorophyll binding K21449 - - 0.0000000000000000000000000000000000000000000000000000009966 201.0
YHH3_k127_2951144_13 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000000000000000000000000000001856 183.0
YHH3_k127_2951144_14 - - - - 0.00000000000000000000000000000000000000000000006715 177.0
YHH3_k127_2951144_15 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000000001048 144.0
YHH3_k127_2951144_16 Pentapeptide repeats (9 copies) - - - 0.00000000000000000000000000000000005563 145.0
YHH3_k127_2951144_17 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000007695 109.0
YHH3_k127_2951144_18 PFAM Resolvase, N-terminal - - - 0.0000000000000000008079 87.0
YHH3_k127_2951144_19 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.000000000000000008292 85.0
YHH3_k127_2951144_2 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 539.0
YHH3_k127_2951144_3 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 523.0
YHH3_k127_2951144_4 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008369 469.0
YHH3_k127_2951144_5 50S ribosome-binding GTPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 430.0
YHH3_k127_2951144_6 TPR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 405.0
YHH3_k127_2951144_7 CBS domain K06189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003425 354.0
YHH3_k127_2951144_8 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 334.0
YHH3_k127_2951144_9 b-type cytochrome subunit K03620 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0020037,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044569,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0071944,GO:0097159,GO:1901363,GO:1902494 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 314.0
YHH3_k127_2977129_0 RQC K03654 - 3.6.4.12 1.112e-226 716.0
YHH3_k127_2977129_1 Histidine kinase - - - 4.247e-217 694.0
YHH3_k127_2977129_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003589 264.0
YHH3_k127_2977129_3 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000000000000000005841 188.0
YHH3_k127_2977129_4 Bacterial transcriptional repressor - - - 0.0000000000007216 68.0
YHH3_k127_2993235_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 523.0
YHH3_k127_2993235_1 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004546 416.0
YHH3_k127_2993235_2 protein conserved in bacteria K09928 - - 0.000000000000000000000000000000000000000000000000000001219 197.0
YHH3_k127_2993235_3 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.00000000000000000000000004045 108.0
YHH3_k127_3009771_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0 1124.0
YHH3_k127_3009771_1 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005281 463.0
YHH3_k127_3009771_2 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006014 316.0
YHH3_k127_3009771_3 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000201 256.0
YHH3_k127_3009771_4 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) K01183,K13695,K19303 GO:0000270,GO:0003674,GO:0003824,GO:0004175,GO:0006022,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009254,GO:0016787,GO:0019538,GO:0030203,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901135,GO:1901564 3.2.1.14 0.000000000000000000000000000000000000004836 156.0
YHH3_k127_3047358_0 ATP-citrate synthase beta chain protein K01648 GO:0003674,GO:0003824,GO:0003878,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006084,GO:0006085,GO:0006139,GO:0006163,GO:0006164,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009346,GO:0009987,GO:0016020,GO:0016740,GO:0016746,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0046912,GO:0051186,GO:0051188,GO:0055086,GO:0071616,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.3.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005432 442.0
YHH3_k127_3047358_1 ATP-citrate synthase is the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA in many tissues K01648 GO:0000166,GO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0003878,GO:0005488,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005829,GO:0005886,GO:0006066,GO:0006082,GO:0006084,GO:0006085,GO:0006101,GO:0006107,GO:0006139,GO:0006163,GO:0006164,GO:0006629,GO:0006631,GO:0006633,GO:0006637,GO:0006694,GO:0006695,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008144,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008610,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009346,GO:0009893,GO:0009987,GO:0012505,GO:0015936,GO:0016020,GO:0016053,GO:0016125,GO:0016126,GO:0016192,GO:0016740,GO:0016746,GO:0016999,GO:0017076,GO:0017144,GO:0018130,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030141,GO:0030554,GO:0031323,GO:0031325,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032940,GO:0032991,GO:0033500,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0034774,GO:0035337,GO:0035383,GO:0035384,GO:0035578,GO:0035639,GO:0036094,GO:0036230,GO:0042119,GO:0042582,GO:0042592,GO:0042593,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046165,GO:0046390,GO:0046394,GO:0046483,GO:0046903,GO:0046912,GO:0046949,GO:0048518,GO:0048522,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0055086,GO:0060205,GO:0065007,GO:0065008,GO:0070013,GO:0071616,GO:0071704,GO:0071944,GO:0072330,GO:0072350,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:0097708,GO:0099503,GO:0101002,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901568,GO:1901570,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1904813 2.3.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 422.0
YHH3_k127_3047358_2 Leucine Rich repeat K13730 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004211 381.0
YHH3_k127_3047358_3 TIR domain - - - 0.00000000000000000000005378 115.0
YHH3_k127_3139997_0 PFAM Bacterial pre-peptidase C-terminal domain - - - 0.000000000000000000002457 110.0
YHH3_k127_3140144_0 Belongs to the glycosyl hydrolase 57 family - - - 6.261e-220 695.0
YHH3_k127_3140144_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 9.032e-204 641.0
YHH3_k127_3140144_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 538.0
YHH3_k127_3140144_3 Glycoside hydrolase family 3 domain protein K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 395.0
YHH3_k127_3140144_4 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K19696 - 2.4.2.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 323.0
YHH3_k127_3162314_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934 306.0
YHH3_k127_3162314_1 membrane-bound metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000004171 171.0
YHH3_k127_3162314_2 NYN domain - - - 0.000000000002579 67.0
YHH3_k127_3162314_3 Gram-negative porin - - - 0.000004001 54.0
YHH3_k127_3174366_0 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 2.17e-220 702.0
YHH3_k127_3174366_1 HypF finger - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 595.0
YHH3_k127_3174366_2 Methyl-accepting chemotaxis protein (MCP) signaling domain K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 590.0
YHH3_k127_3174366_3 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 409.0
YHH3_k127_3174366_4 ABC transporter permease K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 360.0
YHH3_k127_3174366_5 PFAM Fimbrial assembly family protein K02461,K02662,K02663,K12289 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 366.0
YHH3_k127_3174366_6 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000287 164.0
YHH3_k127_3181869_0 Required for chromosome condensation and partitioning K03529 - - 5.577e-285 908.0
YHH3_k127_3181869_1 D-alanyl-D-alanine carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005496 338.0
YHH3_k127_3181869_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000008439 173.0
YHH3_k127_3181869_3 - - - - 0.00000000000000000000000000000004576 129.0
YHH3_k127_3235382_0 TonB-dependent Receptor Plug K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004745 616.0
YHH3_k127_3235382_1 TonB-dependent Receptor Plug K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 591.0
YHH3_k127_3235382_2 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 440.0
YHH3_k127_3235382_3 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000001064 168.0
YHH3_k127_3235382_4 OsmC-like protein - - - 0.0000000000000000000000000000000003592 136.0
YHH3_k127_3235382_5 - - - - 0.000000000000000000000000000003412 124.0
YHH3_k127_3243640_0 Condensation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004849 628.0
YHH3_k127_3243640_1 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004842 576.0
YHH3_k127_3243640_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 571.0
YHH3_k127_3243640_3 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 457.0
YHH3_k127_3249745_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 1.631e-212 685.0
YHH3_k127_3249745_1 Protein of unknown function (DUF3782) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 309.0
YHH3_k127_3249745_2 AntA/AntB antirepressor K07741 - - 0.0000000000000000000000000007478 124.0
YHH3_k127_3255851_0 TIGRFAM amino acid adenylation domain - - - 2.818e-194 627.0
YHH3_k127_3255851_1 endopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 412.0
YHH3_k127_3264985_0 BRO family, N-terminal domain K07741 - - 0.00000000000000000000000002068 119.0
YHH3_k127_3271084_0 Belongs to the CarB family K01955 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000825 551.0
YHH3_k127_3271084_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001287 298.0
YHH3_k127_3305015_0 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0008150,GO:0015711,GO:0015740,GO:0015849,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0046942,GO:0051179,GO:0051234,GO:0071702 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008959 475.0
YHH3_k127_3305015_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008579 349.0
YHH3_k127_3305015_2 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006365 328.0
YHH3_k127_3305015_3 COG1593 TRAP-type C4-dicarboxylate transport system large permease component K11690 GO:0005575,GO:0016020,GO:0016021,GO:0031224,GO:0044425 - 0.00000000000000000000000000000000000000000000000000000000000004003 217.0
YHH3_k127_3305015_4 TRAP-type C4-dicarboxylate transport system small permease component K11689 - - 0.000000000000000000000000000000000000000000000000641 179.0
YHH3_k127_3305015_5 GHMP kinases C terminal K07031 - 2.7.1.168 0.000000000000000000000000000000412 135.0
YHH3_k127_3305015_6 Domain of unknown function (DUF4381) - - - 0.00000000000000000000000001179 115.0
YHH3_k127_3353973_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005878 583.0
YHH3_k127_3353973_1 Glycosyltransferases K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009707 321.0
YHH3_k127_3353973_2 PFAM Smr - - - 0.0000000000000000000000000000000000000000000000000000001465 199.0
YHH3_k127_3353973_3 Domain of unknown function DUF29 - - - 0.000000000000000000000000000000000000000000000000004805 184.0
YHH3_k127_3353973_4 Pfam OmpA - - - 0.00000000000000000000000000000006026 131.0
YHH3_k127_3353973_5 PFAM heat shock protein DnaJ domain protein - - - 0.0000000000000000000000000005271 131.0
YHH3_k127_3353973_6 Sulphur globule protein - - - 0.0000000000000001869 85.0
YHH3_k127_3353973_7 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016667,GO:0016671,GO:0016684,GO:0032843,GO:0033554,GO:0034599,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.000000000001103 68.0
YHH3_k127_3371747_0 tRNA 3'-trailer cleavage K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006213 559.0
YHH3_k127_3371747_1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 488.0
YHH3_k127_3371747_2 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 459.0
YHH3_k127_3371747_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 342.0
YHH3_k127_3371747_4 Bacterial protein of unknown function (DUF945) - - - 0.00000000000000000000000000000000000000000000000000000000000000001807 244.0
YHH3_k127_3371747_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000007948 240.0
YHH3_k127_3379904_0 Phosphate K00625,K00634 - 2.3.1.19,2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 611.0
YHH3_k127_3379904_1 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 402.0
YHH3_k127_3379904_10 toxin-antitoxin pair type II binding K08591,K19159 - 2.3.1.15 0.00000000000001863 74.0
YHH3_k127_3379904_12 PBS lyase HEAT-like repeat - - - 0.00000000006862 70.0
YHH3_k127_3379904_13 - - - - 0.0000000001991 64.0
YHH3_k127_3379904_14 TIGRFAM addiction module toxin, RelE StbE family K06218 - - 0.00001369 49.0
YHH3_k127_3379904_15 cysteine-type peptidase activity - - - 0.0002662 52.0
YHH3_k127_3379904_2 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 349.0
YHH3_k127_3379904_3 Catalyzes the addition of molecular CO(2) and H(2)O to ribulose 1,5-bisphosphate (RuBP), generating two molecules of 3- phosphoglycerate (3-PGA). Functions in an archaeal AMP degradation pathway, together with AMP phosphorylase and R15P isomerase K01601 - 4.1.1.39 0.000000000000000000000000000000000000000000000000000000000000000007845 240.0
YHH3_k127_3379904_4 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.00000000000000000000000000000000000000000000000000000000008083 207.0
YHH3_k127_3379904_5 Protein of unknown function (DUF2442) - - - 0.000000000000000000000000000000003595 130.0
YHH3_k127_3379904_6 - - - - 0.0000000000000000000000000000001575 124.0
YHH3_k127_3379904_7 Could be involved in insertion of integral membrane proteins into the membrane K08998 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0031224,GO:0031226,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 0.00000000000000000000000000003435 117.0
YHH3_k127_3379904_8 sequence-specific DNA binding K07467 - - 0.00000000000000000000000000009488 122.0
YHH3_k127_3379904_9 YoeB-like toxin of bacterial type II toxin-antitoxin system K19158 - - 0.0000000000000000000000001398 106.0
YHH3_k127_3449592_0 PFAM Forkhead-associated protein - - - 0.00000000000000000000004763 115.0
YHH3_k127_3449592_1 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000268 94.0
YHH3_k127_3449592_2 6-phosphogluconolactonase activity - - - 0.0000000000003797 79.0
YHH3_k127_3449592_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000001432 72.0
YHH3_k127_3463815_0 type II restriction enzyme, methylase - - - 1.26e-199 634.0
YHH3_k127_3463815_1 type II restriction enzyme, methylase - - - 0.00000000000000000000000000000000000000000000003639 175.0
YHH3_k127_3501000_0 - - - - 0.00000000000000000000000000000000001321 146.0
YHH3_k127_3501000_1 - - - - 0.0000008795 59.0
YHH3_k127_3501000_2 - - - - 0.000002012 55.0
YHH3_k127_3516123_0 arginine decarboxylase K01585 - 4.1.1.19 1.082e-268 841.0
YHH3_k127_3516123_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 4.012e-240 751.0
YHH3_k127_3516123_2 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 351.0
YHH3_k127_3516123_3 Hydrolase K20862 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006766,GO:0006767,GO:0006771,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0018130,GO:0022611,GO:0032502,GO:0034641,GO:0042364,GO:0042578,GO:0042726,GO:0042727,GO:0043167,GO:0043169,GO:0043726,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.1.3.102,3.1.3.104 0.00000000000000000000000000000000000000000000000000000000000000000000002149 249.0
YHH3_k127_3516123_4 regulation of response to stimulus - - - 0.0000000000000000000000000000000000000000000017 172.0
YHH3_k127_3516123_5 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000002824 57.0
YHH3_k127_3623347_0 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008078 378.0
YHH3_k127_3623347_1 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003289 271.0
YHH3_k127_3623347_2 Glycosyl transferases group 1 K16150 - 2.4.1.11 0.000000000000000000000000000000000000000000000000000000000000003894 224.0
YHH3_k127_3623347_3 Glycosyl transferases group 1 K16150 - 2.4.1.11 0.00000000000000000000000000000000000000000000000000002464 193.0
YHH3_k127_3623347_4 protein involved in exopolysaccharide biosynthesis - - - 0.000000000000000000000000000000000000000000000000008203 196.0
YHH3_k127_3623347_5 PFAM MotA TolQ ExbB proton channel family K03561 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0017038,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000004544 171.0
YHH3_k127_3623347_6 COG0810 Periplasmic protein TonB, links inner and outer membranes K03832 - - 0.00000000000000000005747 99.0
YHH3_k127_3623347_7 Domain of unknown function (DUF4340) - - - 0.000000008116 62.0
YHH3_k127_3654329_0 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 1.568e-215 681.0
YHH3_k127_3654329_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 1.79e-208 657.0
YHH3_k127_3654329_10 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000000000000000000000000000008286 184.0
YHH3_k127_3654329_11 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 - - 0.00000000000000000000000000000000000000003419 161.0
YHH3_k127_3654329_12 regulation of ryanodine-sensitive calcium-release channel activity - - - 0.0000000000000000000000000006551 117.0
YHH3_k127_3654329_2 UDP-galactopyranose mutase K01854 - 5.4.99.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 565.0
YHH3_k127_3654329_3 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006755 450.0
YHH3_k127_3654329_4 C-5 cytosine-specific DNA methylase K00558 - 2.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 446.0
YHH3_k127_3654329_5 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005771 421.0
YHH3_k127_3654329_6 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009988 407.0
YHH3_k127_3654329_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000005556 224.0
YHH3_k127_3654329_8 - - - - 0.000000000000000000000000000000000000000000000000000006619 201.0
YHH3_k127_3654329_9 Sel1-like repeats. K07126 - - 0.0000000000000000000000000000000000000000000000000004388 188.0
YHH3_k127_3716043_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003826 549.0
YHH3_k127_3716043_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005795 533.0
YHH3_k127_3716043_2 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 284.0
YHH3_k127_3716043_3 general secretion pathway protein G K02456 - - 0.00000000000000000000000000000000002921 138.0
YHH3_k127_3716043_4 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000000001153 131.0
YHH3_k127_3716043_5 Periplasmic protein TonB links inner and outer membranes K03832 - - 0.0008264 43.0
YHH3_k127_3747531_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 2.099e-203 641.0
YHH3_k127_3747531_3 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000009764 163.0
YHH3_k127_3747531_4 - - - - 0.00000000000000003476 90.0
YHH3_k127_3755238_0 Spermidine putrescine-binding periplasmic protein K02055 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009853 547.0
YHH3_k127_3755238_1 PFAM Three-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000001085 269.0
YHH3_k127_3762599_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1167.0
YHH3_k127_3762599_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 571.0
YHH3_k127_3762599_10 COG2041 Sulfite oxidase and related enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000000003001 236.0
YHH3_k127_3762599_11 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000000000000001277 207.0
YHH3_k127_3762599_12 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.000000000000000000000000000000000000000000000004932 173.0
YHH3_k127_3762599_13 - - - - 0.0000000000000000000000000000000000000002146 166.0
YHH3_k127_3762599_14 Phospholipase_D-nuclease N-terminal - - - 0.00002678 49.0
YHH3_k127_3762599_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 552.0
YHH3_k127_3762599_3 DNA methylase K07319 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 481.0
YHH3_k127_3762599_4 PFAM Archaeal ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000542 484.0
YHH3_k127_3762599_5 Fungalysin/Thermolysin Propeptide Motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 464.0
YHH3_k127_3762599_6 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005026 437.0
YHH3_k127_3762599_7 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009597 404.0
YHH3_k127_3762599_8 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 288.0
YHH3_k127_3762599_9 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005124 275.0
YHH3_k127_3765372_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004475 558.0
YHH3_k127_3765372_1 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 386.0
YHH3_k127_3765372_2 signal peptide peptidase SppA, 36K type K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003869 370.0
YHH3_k127_3765372_3 Histidine kinase K20973 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 361.0
YHH3_k127_3765372_4 Belongs to the MEMO1 family K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 330.0
YHH3_k127_3765372_5 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000002048 236.0
YHH3_k127_3765372_6 pfam ammecr1 - - - 0.0000000000000000000000000000000000000000000000000000000000000007055 224.0
YHH3_k127_3765372_7 protein conserved in bacteria K11022 - - 0.00000000000000000000000000000000000004072 146.0
YHH3_k127_3791198_0 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009484 299.0
YHH3_k127_3791198_1 Belongs to the ompA family - - - 0.00000006964 54.0
YHH3_k127_3818004_0 Aminotransferase K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 549.0
YHH3_k127_3841290_0 SMART Nucleotide binding protein, PINc K07175 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006095 611.0
YHH3_k127_3841290_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 451.0
YHH3_k127_3841290_2 PFAM Transposase, IS605 OrfB, C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004711 386.0
YHH3_k127_3841290_3 HTH transcriptional regulator, MerR - - - 0.0000000000000000000000000000000000000000000000000000000000432 208.0
YHH3_k127_3841290_4 PFAM Gram-negative bacterial tonB protein K03832 - - 0.0000000000000000000000000000000000000000006418 169.0
YHH3_k127_3841290_5 - - - - 0.000000000000000000000000000000000000006638 161.0
YHH3_k127_3841290_6 TIGRFAM Transposase, IS605 OrfB, C-terminal - - - 0.0000000000000002306 82.0
YHH3_k127_3963268_0 Oxygen tolerance - - - 0.00000000000000000000000000005876 131.0
YHH3_k127_3963268_1 HNH nucleases - - - 0.00000000000002041 79.0
YHH3_k127_3978200_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 538.0
YHH3_k127_3978200_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 486.0
YHH3_k127_3978200_2 SMART PAS domain containing protein - - - 0.0000000000000000000001707 108.0
YHH3_k127_3978200_3 PAN domain - - - 0.000000000000000001535 100.0
YHH3_k127_3978200_4 Tfp pilus assembly protein FimV K08086 - - 0.0000002405 63.0
YHH3_k127_4006838_0 FtsX-like permease family K02004 - - 2.034e-269 852.0
YHH3_k127_4006838_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 1.475e-259 841.0
YHH3_k127_4006838_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004341 285.0
YHH3_k127_4011507_0 LytTr DNA-binding domain K08083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001284 282.0
YHH3_k127_4011507_1 Regulator of chromosome condensation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007105 243.0
YHH3_k127_4011507_2 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000000000000000000000000000000000000000000000000003021 222.0
YHH3_k127_4011507_4 Binds the 23S rRNA K02909 - - 0.000000000000000000000000000000002447 130.0
YHH3_k127_4011507_5 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000001849 132.0
YHH3_k127_4011507_6 - - - - 0.00000000000000000000001575 102.0
YHH3_k127_4011507_7 Protein of unknown function (DUF2505) - - - 0.0000000000000000000747 95.0
YHH3_k127_4011507_8 Bacterial antitoxin of type II TA system, VapB - - - 0.00000002586 57.0
YHH3_k127_4016092_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 2.142e-214 673.0
YHH3_k127_4016092_1 OST-HTH/LOTUS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 352.0
YHH3_k127_4016092_2 Domain of unknown function (DUF389) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 311.0
YHH3_k127_4016092_3 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000005576 218.0
YHH3_k127_4107545_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 608.0
YHH3_k127_4107545_1 glycyl-tRNA synthetase, alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 534.0
YHH3_k127_4107545_2 CHAT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005741 479.0
YHH3_k127_4107545_3 Histidine kinase K07716 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 420.0
YHH3_k127_4107545_4 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 355.0
YHH3_k127_4107545_5 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000869 316.0
YHH3_k127_4107545_6 TIGRFAM 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000004884 229.0
YHH3_k127_4107545_7 - - - - 0.00000000000000000000000006594 114.0
YHH3_k127_422734_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 589.0
YHH3_k127_422734_1 glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 404.0
YHH3_k127_4284327_0 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 505.0
YHH3_k127_4284327_1 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007914 351.0
YHH3_k127_4284327_2 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000008859 256.0
YHH3_k127_4284327_3 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000007047 202.0
YHH3_k127_4284327_4 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000000000000000001454 190.0
YHH3_k127_4284327_5 metallopeptidase activity - - - 0.0000000000000001112 91.0
YHH3_k127_4296479_0 glycosyl transferase group 1 K00696 - 2.4.1.14 7.459e-270 848.0
YHH3_k127_4296479_1 PfkB domain protein K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004504 297.0
YHH3_k127_4296479_2 sucrose synthase K00695 - 2.4.1.13 0.000000000000000000000000002314 116.0
YHH3_k127_4333341_0 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 444.0
YHH3_k127_4333341_1 PFAM Histone deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 423.0
YHH3_k127_4333341_2 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004729 267.0
YHH3_k127_4333341_3 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000001494 249.0
YHH3_k127_4333341_4 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000166 221.0
YHH3_k127_4333341_5 mRNA cleavage K19158 - - 0.0000000000000000000000000000000003074 134.0
YHH3_k127_4333341_6 - - - - 0.0000000000000000000000000933 115.0
YHH3_k127_4333341_7 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.000000001835 58.0
YHH3_k127_4333341_8 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000008518 51.0
YHH3_k127_4337348_0 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 565.0
YHH3_k127_4337348_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006387 488.0
YHH3_k127_4337348_10 PFAM AsmA family K07289 - - 0.0000000000000000000000000000000000000000000000000000000191 225.0
YHH3_k127_4337348_11 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000000000000001763 133.0
YHH3_k127_4337348_12 - - - - 0.000000000000000000000002828 111.0
YHH3_k127_4337348_14 - - - - 0.0000000000000000000003655 104.0
YHH3_k127_4337348_15 protein involved in outer membrane biogenesis K07289 - - 0.000000000000006994 89.0
YHH3_k127_4337348_16 Acts as a magnesium transporter K06213 - - 0.0009163 43.0
YHH3_k127_4337348_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000698 448.0
YHH3_k127_4337348_3 ATPase involved in DNA repair - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 353.0
YHH3_k127_4337348_4 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 342.0
YHH3_k127_4337348_5 Resolvase, N terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006281 268.0
YHH3_k127_4337348_6 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000004113 259.0
YHH3_k127_4337348_7 DsrE/DsrF/DrsH-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001692 252.0
YHH3_k127_4337348_8 Conserved hypothetical ATP binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005547 249.0
YHH3_k127_4337348_9 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000000000000000000000000000000005664 209.0
YHH3_k127_4343214_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 2.24e-238 741.0
YHH3_k127_4343214_1 Involved in the TonB-independent uptake of proteins K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 493.0
YHH3_k127_4343214_2 COG1214 Inactive homolog of metal-dependent proteases K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000001754 227.0
YHH3_k127_4343214_3 TolA C-terminal K03646 - - 0.0000000000003275 80.0
YHH3_k127_4343214_4 COG0848 Biopolymer transport protein K03560 - - 0.0000003463 54.0
YHH3_k127_4388126_0 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008059 428.0
YHH3_k127_4388126_1 PFAM aminotransferase class-III K00819,K00821 - 2.6.1.11,2.6.1.13,2.6.1.17 0.00000002045 55.0
YHH3_k127_4484623_0 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 437.0
YHH3_k127_4484623_1 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000000000000000000000001052 204.0
YHH3_k127_4484623_2 Methyltransferase FkbM domain - - - 0.000000004561 58.0
YHH3_k127_4484623_3 Glucose-1-phosphate cytidylyltransferase K00978 - 2.7.7.33 0.00000005894 54.0
YHH3_k127_4532145_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 7.638e-243 762.0
YHH3_k127_4532145_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 411.0
YHH3_k127_4532145_2 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 361.0
YHH3_k127_4532145_3 Belongs to the Dps family K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000000003306 211.0
YHH3_k127_4532145_4 PFAM Peptidase S24 S26A S26B, conserved region - - - 0.000000000000000000000000002595 113.0
YHH3_k127_4533305_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 4.53e-301 930.0
YHH3_k127_4533305_1 Protein of unknown function (DUF4435) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003481 259.0
YHH3_k127_4533305_2 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007704 242.0
YHH3_k127_4533305_3 AAA ATPase domain - - - 0.00000000000000000000000000000000000000000000000000000000002507 210.0
YHH3_k127_4533305_4 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000792 170.0
YHH3_k127_4533305_5 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.000000000000000000000002671 104.0
YHH3_k127_4553790_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1075.0
YHH3_k127_4553790_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 401.0
YHH3_k127_4591667_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 584.0
YHH3_k127_4591667_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003144 588.0
YHH3_k127_4591667_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 601.0
YHH3_k127_4591667_3 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007101 477.0
YHH3_k127_4591667_4 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000722 436.0
YHH3_k127_4591667_5 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000007636 256.0
YHH3_k127_4591667_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002192 266.0
YHH3_k127_4591667_7 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000003301 170.0
YHH3_k127_4591667_8 Methionine biosynthesis protein MetW - - - 0.00000000000000000000001045 108.0
YHH3_k127_4598577_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07711,K19694 - 2.7.13.3 0.0 1324.0
YHH3_k127_4598577_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1090.0
YHH3_k127_4598577_10 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 304.0
YHH3_k127_4598577_11 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 308.0
YHH3_k127_4598577_12 Predicted periplasmic lipoprotein (DUF2279) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000102 248.0
YHH3_k127_4598577_13 Non-ribosomal peptide synthetase modules and related - - - 0.00000000000000000000000000000000000000000000000000000000000000000004978 247.0
YHH3_k127_4598577_14 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000005012 181.0
YHH3_k127_4598577_15 PFAM OsmC family protein - - - 0.00000000000000000000000000000000002291 139.0
YHH3_k127_4598577_2 MGS-like domain - - - 3.458e-202 639.0
YHH3_k127_4598577_3 DAHP synthetase I family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 597.0
YHH3_k127_4598577_4 Type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 584.0
YHH3_k127_4598577_5 TIGRFAM type I secretion membrane fusion protein, HlyD family K12542 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 527.0
YHH3_k127_4598577_6 Methyl-accepting chemotaxis protein (MCP) signaling domain K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 539.0
YHH3_k127_4598577_7 Bacterial regulatory protein, Fis family K10912 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 486.0
YHH3_k127_4598577_8 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 382.0
YHH3_k127_4598577_9 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 359.0
YHH3_k127_460001_0 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000001711 262.0
YHH3_k127_460001_1 Pilin (bacterial filament) K02650 - - 0.000000000000000000000000000000000000000000004416 168.0
YHH3_k127_460001_2 Belongs to the N-Me-Phe pilin family K02650 - - 0.000000000000000000000000000000005627 133.0
YHH3_k127_460001_3 Pilin (bacterial filament) K02650 - - 0.0000000000000000000003111 101.0
YHH3_k127_460001_4 PFAM type II secretion system K02653 - - 0.000000001006 65.0
YHH3_k127_4607672_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.708e-245 767.0
YHH3_k127_4607672_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 591.0
YHH3_k127_4607672_10 Belongs to the WrbA family K03809 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286 300.0
YHH3_k127_4607672_11 6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000801 266.0
YHH3_k127_4607672_12 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000002879 238.0
YHH3_k127_4607672_13 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000001589 237.0
YHH3_k127_4607672_14 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000002024 231.0
YHH3_k127_4607672_15 - - - - 0.000000000000000000000000000000000000000000000000000000000000001965 226.0
YHH3_k127_4607672_16 COG1100 GTPase SAR1 and related small G - - - 0.000000000000000000000000000000000000000000000000000000000002802 214.0
YHH3_k127_4607672_17 Ras of Complex, Roc, domain of DAPkinase - - - 0.000000000000000000000000000000000000000000000000000002238 195.0
YHH3_k127_4607672_18 - - - - 0.000000000000000000000000000000000000000000000000000044 194.0
YHH3_k127_4607672_19 PFAM Amino acid-binding ACT K03567 - - 0.0000000000000000000000000000000000000000000001129 173.0
YHH3_k127_4607672_2 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 559.0
YHH3_k127_4607672_20 SURF1-like protein K14998 - - 0.00000000000000000000000000000000006676 143.0
YHH3_k127_4607672_21 - - - - 0.0000000000000000000000000000000001398 140.0
YHH3_k127_4607672_22 signal sequence binding - - - 0.00000000000000000000000000001943 124.0
YHH3_k127_4607672_3 Outer membrane protein, OmpA MotB, C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 520.0
YHH3_k127_4607672_4 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009081 501.0
YHH3_k127_4607672_5 Peptidase dimerisation domain K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 478.0
YHH3_k127_4607672_6 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000901 363.0
YHH3_k127_4607672_7 aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 364.0
YHH3_k127_4607672_8 cytochrome oxidase assembly K02259 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000465 342.0
YHH3_k127_4607672_9 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006658 324.0
YHH3_k127_4631287_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 1.655e-295 915.0
YHH3_k127_4631287_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 7.129e-222 693.0
YHH3_k127_4631287_10 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 310.0
YHH3_k127_4631287_11 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0015939,GO:0015940,GO:0015949,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000000002583 236.0
YHH3_k127_4631287_12 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.00000000000000000000000000000000000000000000000000000000001214 211.0
YHH3_k127_4631287_13 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.00000000000000000000000000000000000000001518 154.0
YHH3_k127_4631287_14 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000000000000000001262 147.0
YHH3_k127_4631287_15 Type II restriction enzyme, methylase subunits - - - 0.00000000000232 67.0
YHH3_k127_4631287_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 2.236e-210 673.0
YHH3_k127_4631287_3 COG2274 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain K13409 - - 4.15e-203 662.0
YHH3_k127_4631287_4 transporter, dctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006356 610.0
YHH3_k127_4631287_5 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 543.0
YHH3_k127_4631287_6 ABC transporter, ATP-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004981 514.0
YHH3_k127_4631287_7 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 459.0
YHH3_k127_4631287_8 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 385.0
YHH3_k127_4631287_9 Histidine kinase K17292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 326.0
YHH3_k127_4658625_0 argininosuccinate lyase K01755 - 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 440.0
YHH3_k127_4658625_1 cell division protein K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 366.0
YHH3_k127_4658625_2 Serine phosphatase RsbU, regulator of sigma subunit K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 343.0
YHH3_k127_4660599_0 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 4.444e-268 834.0
YHH3_k127_4660599_1 glutamate--cysteine ligase K01919 - 6.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005927 558.0
YHH3_k127_4660599_10 PFAM Response regulator receiver domain K02657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001682 245.0
YHH3_k127_4660599_11 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001203 252.0
YHH3_k127_4660599_12 PFAM Response regulator receiver domain K02658 - - 0.000000000000000000000000000000000000000000000000000000000000003792 218.0
YHH3_k127_4660599_13 4-hydroxybenzoate polyprenyltransferase K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000007191 186.0
YHH3_k127_4660599_14 Sulfur oxidation protein SoxY K17226 - - 0.0000000000000000000000000000000000000000000958 164.0
YHH3_k127_4660599_15 PFAM Sulphur oxidation protein SoxZ K17227 - - 0.000000000000000000000004926 104.0
YHH3_k127_4660599_16 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.000000000000000000000007085 111.0
YHH3_k127_4660599_17 Belongs to the UbiD family K03182 - 4.1.1.98 0.0004585 44.0
YHH3_k127_4660599_2 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 461.0
YHH3_k127_4660599_3 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 445.0
YHH3_k127_4660599_4 PFAM Methyl-accepting chemotaxis protein (MCP) signaling domain K02660 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 371.0
YHH3_k127_4660599_5 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 351.0
YHH3_k127_4660599_6 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11779,K11784 - 1.21.98.1,2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006993 336.0
YHH3_k127_4660599_7 HAD-superfamily hydrolase subfamily IA, variant 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 310.0
YHH3_k127_4660599_8 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001068 280.0
YHH3_k127_4660599_9 Type IV pili signal transduction protein PilI K02659 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004379 270.0
YHH3_k127_4660773_0 PFAM Transglutaminase-like superfamily K22452 - 2.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003966 611.0
YHH3_k127_4660773_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004987 582.0
YHH3_k127_4660773_2 glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 316.0
YHH3_k127_4660773_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 286.0
YHH3_k127_4660773_4 PFAM Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000625 265.0
YHH3_k127_4660773_5 TIGRFAM DJ-1 family protein K03152 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000008578 236.0
YHH3_k127_4660773_6 NTP binding protein (Contains STAS domain) K07122 - - 0.0000000000001102 75.0
YHH3_k127_4684425_0 Lactonase, 7-bladed beta-propeller - - - 0.0 1217.0
YHH3_k127_4684425_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 3.836e-316 975.0
YHH3_k127_4684425_10 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005715 321.0
YHH3_k127_4684425_11 COG4531 ABC-type Zn2 transport system, periplasmic component surface adhesin K09815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 292.0
YHH3_k127_4684425_12 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000212 283.0
YHH3_k127_4684425_13 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582 - 3.1.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000338 258.0
YHH3_k127_4684425_14 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000001089 145.0
YHH3_k127_4684425_15 Glutaredoxin-like domain (DUF836) K00384 - 1.8.1.9 0.00000000000000002147 85.0
YHH3_k127_4684425_16 Domain of unknown function (DUF4845) - - - 0.000000004008 63.0
YHH3_k127_4684425_2 Isocitrate dehydrogenase K00031 - 1.1.1.42 5.733e-208 652.0
YHH3_k127_4684425_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 593.0
YHH3_k127_4684425_4 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 532.0
YHH3_k127_4684425_5 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 496.0
YHH3_k127_4684425_6 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 465.0
YHH3_k127_4684425_7 TIGRFAM diguanylate cyclase (GGDEF) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 425.0
YHH3_k127_4684425_8 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 415.0
YHH3_k127_4684425_9 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008209 339.0
YHH3_k127_4708025_0 PFAM Citrate transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007127 589.0
YHH3_k127_4708025_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008664 538.0
YHH3_k127_4708025_2 ABC transporter, ATP-binding protein K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 394.0
YHH3_k127_4708025_3 Sigma 54 modulation protein K05808 - - 0.00000000000000000000000000000000000000000000000000002121 189.0
YHH3_k127_4728671_0 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000008303 145.0
YHH3_k127_4728671_1 Subtilase family - - - 0.00000000003432 75.0
YHH3_k127_4731502_0 Histidine kinase-, DNA gyrase B-, and HSP90-like - - - 6.773e-256 807.0
YHH3_k127_4731502_1 PFAM Ig domain protein, group 1 domain protein - - - 3.303e-251 816.0
YHH3_k127_4731502_10 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.0000000000000000000000000000000000001413 145.0
YHH3_k127_4731502_11 COGs COG5439 conserved - - - 0.00000000000000000009652 93.0
YHH3_k127_4731502_12 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000001217 89.0
YHH3_k127_4731502_13 - - - - 0.000000000000002053 82.0
YHH3_k127_4731502_14 Bacterial pre-peptidase C-terminal domain - - - 0.000000000000271 81.0
YHH3_k127_4731502_15 - - - - 0.0000000000003555 75.0
YHH3_k127_4731502_16 Copper amine oxidase N-terminal domain - - - 0.0000192 55.0
YHH3_k127_4731502_2 PFAM tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 2.022e-212 665.0
YHH3_k127_4731502_3 PFAM Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 353.0
YHH3_k127_4731502_4 metalloendopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000169 277.0
YHH3_k127_4731502_5 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002381 269.0
YHH3_k127_4731502_6 redox protein, regulator of disulfide bond formation K07397 - - 0.0000000000000000000000000000000000000000000000000000003719 196.0
YHH3_k127_4731502_7 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000001538 187.0
YHH3_k127_4731502_8 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000006987 173.0
YHH3_k127_4731502_9 Chemotaxis protein CheC, inhibitor of MCP methylation K03410 - - 0.000000000000000000000000000000000000000000005968 170.0
YHH3_k127_4748106_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004523 439.0
YHH3_k127_4748106_1 TIGRFAM filamentous hemagglutinin family N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004995 385.0
YHH3_k127_4748106_2 COG1960 Acyl-CoA dehydrogenases K20035 - - 0.0000000000000000000000118 105.0
YHH3_k127_4748106_3 PFAM peptidase M4 thermolysin - - - 0.0000568 55.0
YHH3_k127_4755992_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 3e-322 1002.0
YHH3_k127_4755992_1 Transposase - - - 2.161e-308 952.0
YHH3_k127_4755992_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004127 527.0
YHH3_k127_4755992_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 368.0
YHH3_k127_4755992_4 alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 313.0
YHH3_k127_4755992_5 Sterol carrier protein - - - 0.000000000000000000000000000000000000000000000000000000001813 203.0
YHH3_k127_4756378_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 591.0
YHH3_k127_4756378_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009251 548.0
YHH3_k127_4756378_2 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 440.0
YHH3_k127_4756378_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009739 427.0
YHH3_k127_4756378_4 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004784 298.0
YHH3_k127_4756378_5 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.00000000000000008817 84.0
YHH3_k127_4756378_6 Phosphoglycerate mutase family - - - 0.0000000003214 61.0
YHH3_k127_4773870_0 Flavocytochrome c sulphide dehydrogenase, flavin-binding K17229 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.8.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000004293 249.0
YHH3_k127_4773870_1 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000000000004363 179.0
YHH3_k127_4773870_2 cytochrome K17230 - - 0.000000000000000000000000000000000000000000006148 169.0
YHH3_k127_4783643_0 COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 3.017e-196 625.0
YHH3_k127_4783643_1 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 584.0
YHH3_k127_4783643_2 Cell wall hydrolase autolysin K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008172 309.0
YHH3_k127_4783643_3 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004897 279.0
YHH3_k127_4783643_4 Glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002244 271.0
YHH3_k127_4783643_5 TIGRFAM CRISPR-associated protein - - - 0.000000000000000000000000000000000000000000000000000000000000007799 223.0
YHH3_k127_4783643_6 - - - - 0.00000000000000000001603 94.0
YHH3_k127_4830547_0 Periplasmic copper-binding protein (NosD) - - - 0.000006942 59.0
YHH3_k127_4832242_0 Glutamate synthase, NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 3.993e-251 781.0
YHH3_k127_4832242_1 alanine symporter K03310 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 586.0
YHH3_k127_4832242_10 PFAM Nucleotidyl transferase K00992 - 2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 288.0
YHH3_k127_4832242_11 lytic transglycosylase activity K03194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001818 263.0
YHH3_k127_4832242_12 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000004608 196.0
YHH3_k127_4832242_13 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000001218 175.0
YHH3_k127_4832242_14 Pfam Tetratricopeptide K07114 - - 0.0000000000000000000000000000000007387 140.0
YHH3_k127_4832242_15 - - - - 0.0000000000000000000006961 96.0
YHH3_k127_4832242_2 Signal Transduction Histidine Kinase K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 517.0
YHH3_k127_4832242_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008541 416.0
YHH3_k127_4832242_4 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004419 373.0
YHH3_k127_4832242_5 related to Ser Thr protein kinases K07102 GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006022,GO:0006040,GO:0006082,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006745 335.0
YHH3_k127_4832242_6 Response regulator receiver K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009163 323.0
YHH3_k127_4832242_7 PFAM Ion transport K08714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 317.0
YHH3_k127_4832242_8 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 291.0
YHH3_k127_4844247_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 469.0
YHH3_k127_4857220_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 6.348e-208 655.0
YHH3_k127_4857220_1 Domain of unknown function (DUF4389) - - - 0.000000000000002702 79.0
YHH3_k127_4867311_0 reductase, alpha subunit K00394 - 1.8.99.2 0.0 1161.0
YHH3_k127_4867311_1 serine threonine protein kinase K12132 - 2.7.11.1 6.022e-259 825.0
YHH3_k127_4867311_2 transferase activity, transferring acyl groups other than amino-acyl groups K01897,K03466,K18687 - 6.2.1.3,6.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 548.0
YHH3_k127_4867311_3 Adenosine-5'-phosphosulfate reductase beta subunit K00395 - 1.8.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003393 283.0
YHH3_k127_4867311_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000001224 146.0
YHH3_k127_4867311_5 transferase activity, transferring acyl groups other than amino-acyl groups K01897,K03466,K18687 - 6.2.1.3,6.2.1.41 0.0000000007394 63.0
YHH3_k127_4867311_6 PFAM Protein phosphatase K20074 - 3.1.3.16 0.00000004774 55.0
YHH3_k127_497216_0 Belongs to the 5'-nucleotidase family K17224 - - 2.411e-271 844.0
YHH3_k127_497216_1 AI-2E family transporter K03548 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004216 456.0
YHH3_k127_497216_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000001207 86.0
YHH3_k127_497216_3 BRO family, N-terminal domain - - - 0.0000000000104 74.0
YHH3_k127_497216_4 BRO family, N-terminal domain - - - 0.000000002536 63.0
YHH3_k127_4974287_0 glycosyl transferase, family 2 K20444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 523.0
YHH3_k127_5001770_0 FabA-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 299.0
YHH3_k127_5001770_1 Right handed beta helix region - - - 0.00000000000000000000000000000000000009686 162.0
YHH3_k127_5001770_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000002135 122.0
YHH3_k127_5001770_3 Transposase DDE domain - - - 0.000000001551 61.0
YHH3_k127_5042571_0 Dynamin family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 422.0
YHH3_k127_5042571_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 357.0
YHH3_k127_5079537_0 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.0 1345.0
YHH3_k127_5079537_2 Belongs to the peptidase M16 family K07263 - - 0.0000000000000000000000000000000000000000000000000000002166 197.0
YHH3_k127_5079537_3 - - - - 0.000008924 57.0
YHH3_k127_5082882_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.171e-306 949.0
YHH3_k127_5082882_1 Putative diguanylate phosphodiesterase - - - 2.323e-240 756.0
YHH3_k127_5082882_10 serine-type endopeptidase activity K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005661 426.0
YHH3_k127_5082882_11 Transglutaminase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009365 406.0
YHH3_k127_5082882_12 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 392.0
YHH3_k127_5082882_13 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 383.0
YHH3_k127_5082882_14 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 379.0
YHH3_k127_5082882_15 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006095 348.0
YHH3_k127_5082882_16 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004756 290.0
YHH3_k127_5082882_17 Putative DNA-binding domain K09929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003743 258.0
YHH3_k127_5082882_18 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000161 209.0
YHH3_k127_5082882_19 GGDEF domain K07814 - - 0.00000000000000000000000000000000000000000000000000007837 188.0
YHH3_k127_5082882_2 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 2.383e-231 745.0
YHH3_k127_5082882_20 PGAP1-like protein - - - 0.00000000000000000000000000000000000000000000000006374 189.0
YHH3_k127_5082882_21 SdrD B-like domain - - - 0.000000000000000000000000000003323 139.0
YHH3_k127_5082882_22 PFAM Fimbrial assembly protein (PilN) K02663 - - 0.000000000000000000000000000007648 121.0
YHH3_k127_5082882_23 membrane - - - 0.000000000000000000001659 97.0
YHH3_k127_5082882_24 Putative phage abortive infection protein - - - 0.000000000000000003545 95.0
YHH3_k127_5082882_25 Competence protein ComEA K02237 - - 0.00000000000002243 78.0
YHH3_k127_5082882_26 - - - - 0.00000000000003326 85.0
YHH3_k127_5082882_27 Helix-turn-helix domain K07496 - - 0.0000000001177 62.0
YHH3_k127_5082882_28 - - - - 0.0000001311 58.0
YHH3_k127_5082882_3 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 1.127e-219 708.0
YHH3_k127_5082882_4 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 566.0
YHH3_k127_5082882_5 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009325 490.0
YHH3_k127_5082882_6 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 456.0
YHH3_k127_5082882_7 Cache domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002302 473.0
YHH3_k127_5082882_8 Glycosyl transferases group 1 K12995 - 2.4.1.348 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 445.0
YHH3_k127_5082882_9 Protein of unknown function (DUF692) K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 424.0
YHH3_k127_5090925_0 pyruvate flavodoxin ferredoxin oxidoreductase K00169,K03737 - 1.2.7.1 0.0 2296.0
YHH3_k127_5090925_1 Part of a membrane complex involved in electron transport K03615 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007993 544.0
YHH3_k127_5090925_10 Part of a membrane complex involved in electron transport K03612 - - 0.0000000000000000000000000000000000000000000000000000000000000002667 227.0
YHH3_k127_5090925_11 PFAM Resolvase, N-terminal - - - 0.0000000000000000000000000000000000000000000000003042 179.0
YHH3_k127_5090925_12 - - - - 0.00000001358 59.0
YHH3_k127_5090925_2 Part of a membrane complex involved in electron transport K03614 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006809 460.0
YHH3_k127_5090925_3 oligosaccharyl transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 470.0
YHH3_k127_5090925_4 Fe-S cluster K03616 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 431.0
YHH3_k127_5090925_5 PFAM binding-protein-dependent transport systems inner membrane component K02033,K15581 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 422.0
YHH3_k127_5090925_6 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 372.0
YHH3_k127_5090925_7 Part of a membrane complex involved in electron transport K03613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 316.0
YHH3_k127_5090925_8 Part of a membrane complex involved in electron transport K03617 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001732 278.0
YHH3_k127_5090925_9 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000249 230.0
YHH3_k127_5093692_0 Belongs to the ClpA ClpB family K03694 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 - 0.0 1064.0
YHH3_k127_5093692_1 Mo-co oxidoreductase dimerisation domain - - - 1.893e-210 661.0
YHH3_k127_5093692_2 N-6 DNA Methylase - - - 1.038e-203 652.0
YHH3_k127_5093692_3 tRNA 3'-trailer cleavage K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005844 525.0
YHH3_k127_5093692_4 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007666 329.0
YHH3_k127_5093692_5 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000000000000000000000002858 232.0
YHH3_k127_5093692_6 Uncharacterized conserved protein (DUF2183) - - - 0.0000000000000000000000000000000000000000000000000000631 200.0
YHH3_k127_5093692_7 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000000000000000006262 164.0
YHH3_k127_5093692_8 cytochrome - - - 0.0000000000000000000000003069 110.0
YHH3_k127_5118323_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 1.19e-218 683.0
YHH3_k127_5118323_1 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 389.0
YHH3_k127_5118323_2 reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008917 327.0
YHH3_k127_5118323_3 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0043170,GO:0044425,GO:0044459,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009355 324.0
YHH3_k127_5118323_4 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000000000000000000007981 136.0
YHH3_k127_5118323_5 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0007346,GO:0008150,GO:0009987,GO:0010564,GO:0032465,GO:0032954,GO:0032955,GO:0042802,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051301,GO:0051302,GO:0051726,GO:0060187,GO:0065007,GO:1901891,GO:1902412,GO:1903436 - 0.000000005786 59.0
YHH3_k127_512465_0 PFAM Transglycosylase SLT domain K08309 - - 1.593e-201 646.0
YHH3_k127_512465_1 Domain of unknown function DUF29 - - - 0.00000000000000000000000000000000000000000000004896 175.0
YHH3_k127_512465_2 Response regulator receiver - - - 0.0000000000000003844 78.0
YHH3_k127_5135652_0 Molecular chaperone. Has ATPase activity K04079 - - 1.54e-308 956.0
YHH3_k127_5135652_1 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 2.086e-263 817.0
YHH3_k127_5135652_10 TIGRFAM regulatory protein, FmdB family - - - 0.000000000000000000000000000000000000000004019 156.0
YHH3_k127_5135652_11 OmpA family - - - 0.000000000000000000005482 100.0
YHH3_k127_5135652_12 PFAM Rickettsia 17 kDa surface antigen - - - 0.00005495 48.0
YHH3_k127_5135652_2 methionine synthase K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 2.267e-247 773.0
YHH3_k127_5135652_3 - - - - 2.117e-243 772.0
YHH3_k127_5135652_4 Prephenate dehydratase K04518,K14170 - 4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 454.0
YHH3_k127_5135652_5 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007254 376.0
YHH3_k127_5135652_6 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001963 278.0
YHH3_k127_5135652_7 NADH dehydrogenase K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000001569 253.0
YHH3_k127_5135652_8 dihydroneopterin triphosphate K08310 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008828,GO:0009058,GO:0009108,GO:0009110,GO:0009396,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017144,GO:0018130,GO:0019177,GO:0019438,GO:0019752,GO:0034641,GO:0042364,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046655,GO:0046656,GO:0046872,GO:0047429,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.6.1.67 0.00000000000000000000000000000000000000000000007124 172.0
YHH3_k127_5135652_9 BioY family K03523 - - 0.0000000000000000000000000000000000000000001177 166.0
YHH3_k127_5213572_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 7.531e-206 686.0
YHH3_k127_5213572_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002794 568.0
YHH3_k127_5213572_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007044 480.0
YHH3_k127_5213572_4 Putative transposase of IS4/5 family (DUF4096) - - - 0.000000004561 58.0
YHH3_k127_526073_0 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 522.0
YHH3_k127_526073_1 PFAM pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000535 477.0
YHH3_k127_526073_2 PFAM pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007411 380.0
YHH3_k127_526073_3 short-chain dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 289.0
YHH3_k127_526073_4 polysaccharide export protein K01991 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001312 273.0
YHH3_k127_526073_5 Chain length determinant protein - - - 0.000000000000000000000000000000000000000000008996 175.0
YHH3_k127_526073_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000001761 160.0
YHH3_k127_526073_7 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749 - - 0.0000000000000008292 81.0
YHH3_k127_528152_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007216 506.0
YHH3_k127_528152_1 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007311 458.0
YHH3_k127_528152_10 Riboflavin synthase K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000002963 202.0
YHH3_k127_528152_11 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000000001563 196.0
YHH3_k127_528152_12 SPFH domain / Band 7 family - - - 0.00000000000000000000000000000000000000000000000001641 184.0
YHH3_k127_528152_13 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000001743 164.0
YHH3_k127_528152_14 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000006348 170.0
YHH3_k127_528152_15 Putative TM nitroreductase - - - 0.0000000000000000000000000000000000000000001154 164.0
YHH3_k127_528152_16 OmpA family K03640 - - 0.0000000000000000000000000000000000000000001575 165.0
YHH3_k127_528152_17 6,7-dimethyl-8-ribityllumazine synthase K00794 - 2.5.1.78 0.0000000000000000000000000000000000000001812 153.0
YHH3_k127_528152_18 membrane-anchored protein - - - 0.00000000000000000000000000000000005898 139.0
YHH3_k127_528152_2 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005619 354.0
YHH3_k127_528152_3 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009532 335.0
YHH3_k127_528152_4 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006061 317.0
YHH3_k127_528152_5 AAA ATPase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006036 307.0
YHH3_k127_528152_6 Thiamine monophosphate synthase K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 297.0
YHH3_k127_528152_7 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001491 282.0
YHH3_k127_528152_8 SPFH domain / Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000973 275.0
YHH3_k127_528152_9 Resolvase, N terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000006542 230.0
YHH3_k127_5298149_0 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003531 595.0
YHH3_k127_5298149_1 Protein of unknown function, DUF255 K06888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 523.0
YHH3_k127_5298149_2 glyoxalase K08234 - - 0.0000000000000000000000000000000000000000000000000000004671 198.0
YHH3_k127_5298149_3 PIN domain - - - 0.000000000003152 71.0
YHH3_k127_5298149_4 - - - - 0.000003876 52.0
YHH3_k127_5299924_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 1.595e-232 734.0
YHH3_k127_5299924_1 Polysaccharide biosynthesis protein - - - 8.073e-200 640.0
YHH3_k127_5299924_10 COGs COG5439 conserved - - - 0.000000000000000000000000000000000000000001967 158.0
YHH3_k127_5299924_11 Sel1-like repeats. K07126 - - 0.00000000000000000000000000000001909 144.0
YHH3_k127_5299924_2 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 566.0
YHH3_k127_5299924_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 517.0
YHH3_k127_5299924_4 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 492.0
YHH3_k127_5299924_5 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 474.0
YHH3_k127_5299924_6 Pfam:Arch_ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006425 441.0
YHH3_k127_5299924_7 COGs COG5381 conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001741 257.0
YHH3_k127_5299924_8 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000849 269.0
YHH3_k127_5299924_9 Bacterial sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001178 243.0
YHH3_k127_5307015_0 Pfam Tetratricopeptide - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 442.0
YHH3_k127_5307015_1 Glycosyl transferase K12984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008205 295.0
YHH3_k127_5307015_2 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000001671 248.0
YHH3_k127_5307015_3 Domain of unknown function DUF29 - - - 0.000000000000000000000000000000000002696 142.0
YHH3_k127_5307015_4 PhoQ Sensor - - - 0.0000000000000000000000721 99.0
YHH3_k127_5323877_0 ion channel K05802 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 506.0
YHH3_k127_5323877_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000001439 238.0
YHH3_k127_5323877_2 Outer membrane efflux protein - - - 0.000000000000000000000000009781 126.0
YHH3_k127_5324719_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1027.0
YHH3_k127_5324719_1 endonuclease activity K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 525.0
YHH3_k127_5324719_2 guanyl-nucleotide exchange factor activity K12287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006585 488.0
YHH3_k127_5324719_3 CHAT domain K03496,K05592 - 3.6.4.13 0.000000000000000000000000000000000000000000000000002994 195.0
YHH3_k127_5324719_4 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000142 115.0
YHH3_k127_5347069_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07646 - 2.7.13.3 4.245e-271 849.0
YHH3_k127_5347069_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 7.719e-259 805.0
YHH3_k127_5347069_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004667 610.0
YHH3_k127_5347069_3 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005262 537.0
YHH3_k127_5347069_4 Permease YjgP YjgQ K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 387.0
YHH3_k127_5347069_5 Permease YjgP YjgQ K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 365.0
YHH3_k127_5347069_6 NADP transhydrogenase K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000459 153.0
YHH3_k127_5347069_7 RDD family - - - 0.00000000000000000000000000000001153 131.0
YHH3_k127_5347069_8 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000000000004954 117.0
YHH3_k127_5393211_0 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 568.0
YHH3_k127_5393211_1 Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system K02045 - 3.6.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 484.0
YHH3_k127_5393211_2 Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import K02047 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007977 407.0
YHH3_k127_5420389_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K15372 - 2.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004646 411.0
YHH3_k127_5420389_1 Heavy metal translocating P-type atpase - - - 0.0000000000000000000000000000000000000000000000000000000005803 216.0
YHH3_k127_5435589_0 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 446.0
YHH3_k127_5435589_1 TIGRFAM 5,10-methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 411.0
YHH3_k127_5553491_0 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 548.0
YHH3_k127_5553491_2 GHMP kinases C terminal K07031 - 2.7.1.168 0.00000000000000000000000000000000000000001248 160.0
YHH3_k127_5553491_3 Nucleotidyl transferase K00966 - 2.7.7.13 0.000000000000000000000000009989 113.0
YHH3_k127_557720_0 acid phosphatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 547.0
YHH3_k127_557720_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000566 307.0
YHH3_k127_557720_2 protein conserved in bacteria - - - 0.0000000000000000000000002487 118.0
YHH3_k127_5605809_0 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 298.0
YHH3_k127_5605809_1 - - - - 0.00000000000000000000000000000000000000000000000002905 181.0
YHH3_k127_5605809_2 Transposase, IS605 OrfB family K07496 - - 0.00000000000002752 74.0
YHH3_k127_5605992_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 1.131e-231 739.0
YHH3_k127_5605992_1 Transposase, IS605 OrfB family K07496 - - 0.0000000000000000000000000000000000000000000000002118 180.0
YHH3_k127_5605992_2 endoribonuclease L-PSP - - - 0.000000000000000000000000001261 115.0
YHH3_k127_5605992_3 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.0000000000000000000002689 98.0
YHH3_k127_5605992_4 - - - - 0.00000000000005621 78.0
YHH3_k127_5612093_0 response regulator receiver K02487,K06596 - - 1.374e-240 785.0
YHH3_k127_5612093_1 Histidine kinase - - - 1.406e-238 749.0
YHH3_k127_5612093_2 PFAM Methyl-accepting chemotaxis protein (MCP) signaling domain K02660 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 499.0
YHH3_k127_5612093_3 PTS IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.000000000000000000000000000000000000002574 149.0
YHH3_k127_5612093_4 chemotaxis signal transduction protein K06598 - - 0.0000000000000000000000000000001589 128.0
YHH3_k127_576040_0 Response regulator receiver K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 529.0
YHH3_k127_576040_1 Iron-containing alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008512 492.0
YHH3_k127_576040_10 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K05568 - - 0.000000000000000000000000000000000000000000000001702 192.0
YHH3_k127_576040_11 PTS system fructose IIA component K02821 - 2.7.1.194 0.000000000000000000000000000000000000000000000002106 176.0
YHH3_k127_576040_12 Antibiotic biosynthesis monooxygenase K11530 - 5.3.1.32 0.0000000000000000000000000000000001682 136.0
YHH3_k127_576040_13 addiction module antidote protein, HigA family K21498 - - 0.000000000000000000000000001648 114.0
YHH3_k127_576040_14 GHKL domain - - - 0.0000000000000000000002253 100.0
YHH3_k127_576040_16 COG3209 Rhs family protein - GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0004549,GO:0006139,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016078,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:0140101,GO:1901360,GO:1901361,GO:1901575 - 0.000000004415 66.0
YHH3_k127_576040_2 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332 417.0
YHH3_k127_576040_3 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000338 258.0
YHH3_k127_576040_4 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000006222 237.0
YHH3_k127_576040_5 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000001206 236.0
YHH3_k127_576040_6 phosphoribosyltransferase K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000009422 220.0
YHH3_k127_576040_7 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000005511 214.0
YHH3_k127_576040_8 SMART phosphoesterase PHP domain protein K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000001192 217.0
YHH3_k127_576040_9 Domain of unknown function (DUF4401) - - - 0.00000000000000000000000000000000000000000000000000007162 200.0
YHH3_k127_5774240_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1306.0
YHH3_k127_5774240_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 578.0
YHH3_k127_5774240_2 COG0714 MoxR-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 458.0
YHH3_k127_5774240_3 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004516 387.0
YHH3_k127_5774240_4 TIGRFAM filamentous hemagglutinin family N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000007454 256.0
YHH3_k127_5774240_5 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000001383 166.0
YHH3_k127_5774240_6 - - - - 0.0000000000000000000004512 98.0
YHH3_k127_5774240_7 PFAM VanZ - - - 0.00000001499 61.0
YHH3_k127_5774240_8 Family of unknown function (DUF5320) - - - 0.00004319 48.0
YHH3_k127_5781758_0 Phosphoribosyl transferase - - - 0.00000000000000000000000000000000000000000000000000000005213 209.0
YHH3_k127_5781758_1 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000000000000000000000000000004328 186.0
YHH3_k127_5781758_2 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000904 160.0
YHH3_k127_5781758_3 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.000000000000000000000000000000000000011 147.0
YHH3_k127_5781758_4 - - - - 0.000000000000000000000000000001841 139.0
YHH3_k127_5799276_0 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001199 275.0
YHH3_k127_5799276_1 diguanylate cyclase (GGDEF) domain K21025 - - 0.00000000000000000000000000000000000000000000000000006504 188.0
YHH3_k127_5799276_2 serine threonine protein kinase - - - 0.000000000000000000000002236 119.0
YHH3_k127_5942001_0 cheY-homologous receiver domain K20977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 547.0
YHH3_k127_5942001_1 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 460.0
YHH3_k127_5942001_10 Receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000183 226.0
YHH3_k127_5942001_11 Protein of unknown function (DUF3050) - - - 0.00000000000000000000000000000000000000000000000000000000002635 209.0
YHH3_k127_5942001_12 PFAM Rhodanese domain protein - - - 0.0000000000000000000000000000000000000000000000000000001261 198.0
YHH3_k127_5942001_13 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.0000000000000000000000000000000000000000000000000002096 187.0
YHH3_k127_5942001_14 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000506 183.0
YHH3_k127_5942001_15 Regulatory protein, FmdB family - - - 0.0000000000000000000000002842 107.0
YHH3_k127_5942001_16 TonB-dependent Receptor Plug Domain - - - 0.000000000000000007927 89.0
YHH3_k127_5942001_17 - - - - 0.0000000000000001358 83.0
YHH3_k127_5942001_18 Protein of unknown function (DUF3096) - - - 0.0000000000517 64.0
YHH3_k127_5942001_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 441.0
YHH3_k127_5942001_3 heptosyltransferase K02849 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0071704,GO:0071967,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004684 401.0
YHH3_k127_5942001_4 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332 383.0
YHH3_k127_5942001_5 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 323.0
YHH3_k127_5942001_6 Membrane protein involved in the export of O-antigen and teichoic acid K03328 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003295 319.0
YHH3_k127_5942001_7 PFAM PfkB domain protein K00846 - 2.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 300.0
YHH3_k127_5942001_8 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 287.0
YHH3_k127_5942001_9 PFAM Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003595 258.0
YHH3_k127_6085641_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007724 534.0
YHH3_k127_6085641_1 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 437.0
YHH3_k127_6085641_2 ABC transporter transmembrane region K12541 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001007 273.0
YHH3_k127_6085641_3 Ferredoxin - - - 0.00000000000000000000000000000000000000001926 154.0
YHH3_k127_6085641_4 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000000000000007155 137.0
YHH3_k127_6137933_0 protein conserved in bacteria K09989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007053 561.0
YHH3_k127_6137933_1 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007385 427.0
YHH3_k127_6137933_2 - - - - 0.00000002463 58.0
YHH3_k127_6137933_3 - - - - 0.00006465 48.0
YHH3_k127_6146992_0 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 370.0
YHH3_k127_6146992_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000003315 216.0
YHH3_k127_6146992_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000000000000001963 205.0
YHH3_k127_6146992_3 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000000000000000007934 190.0
YHH3_k127_6146992_4 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000000002362 140.0
YHH3_k127_6146992_5 ATP synthase I chain K02116 - - 0.000000000000000000000000000000004291 132.0
YHH3_k127_6146992_6 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000001459 125.0
YHH3_k127_6151500_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1131.0
YHH3_k127_6151500_1 Secretion system protein K02454,K02652 - - 5.841e-269 837.0
YHH3_k127_6151500_10 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 - - 0.00000000000000000000000000000000000000000000000000005653 192.0
YHH3_k127_6151500_11 - - - - 0.000000000000000000000000000000000000000000000001021 183.0
YHH3_k127_6151500_12 menaquinone-dependent protoporphyrinogen oxidase activity K00230 - 1.3.5.3 0.00000000000000000000000000000000000000000000001512 176.0
YHH3_k127_6151500_13 Molybdenum cofactor biosynthesis protein MoaE K03635 - 2.8.1.12 0.000000000000000000000000000000000000000005464 159.0
YHH3_k127_6151500_14 COG3245 Cytochrome c5 K02277 - 1.9.3.1 0.0000000000000000000000004361 113.0
YHH3_k127_6151500_15 - - - - 0.0000000000000000000009769 101.0
YHH3_k127_6151500_16 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.0000000000000000003958 89.0
YHH3_k127_6151500_17 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.00001072 49.0
YHH3_k127_6151500_2 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005456 572.0
YHH3_k127_6151500_3 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 475.0
YHH3_k127_6151500_4 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 GO:0000166,GO:0003674,GO:0003824,GO:0004152,GO:0004158,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0010181,GO:0016020,GO:0016491,GO:0016627,GO:0016634,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0032553,GO:0034641,GO:0034654,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0048037,GO:0050662,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 424.0
YHH3_k127_6151500_5 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 411.0
YHH3_k127_6151500_6 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 407.0
YHH3_k127_6151500_7 short-chain dehydrogenase reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008041 374.0
YHH3_k127_6151500_8 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 337.0
YHH3_k127_6151500_9 PFAM Uncharacterised protein family (UPF0104) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000935 329.0
YHH3_k127_6177188_0 O-antigen ligase like membrane protein - - - 0.000000000000000000000000000000000000000000000000000001504 206.0
YHH3_k127_6177188_1 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 0.000000000000000000000000000000000000000000000000000009785 196.0
YHH3_k127_6177864_0 Radical SAM superfamily K04069 - 1.97.1.4 7.219e-195 611.0
YHH3_k127_6177864_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 505.0
YHH3_k127_6177864_10 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000000000000000001403 199.0
YHH3_k127_6177864_11 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000000000000000000000000000004382 185.0
YHH3_k127_6177864_12 binds to the 23S rRNA K02939 - - 0.00000000000000000000000000000000000000000000000001418 183.0
YHH3_k127_6177864_13 protein conserved in bacteria K03690 - - 0.00000000000000000000000000000000000003529 151.0
YHH3_k127_6177864_14 RDD family - - - 0.00000000000000000000000000000000001359 140.0
YHH3_k127_6177864_15 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000005477 134.0
YHH3_k127_6177864_17 - - - - 0.00000005012 58.0
YHH3_k127_6177864_2 COG0714 MoxR-like ATPases K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 481.0
YHH3_k127_6177864_3 Peptidase M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008094 459.0
YHH3_k127_6177864_4 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 441.0
YHH3_k127_6177864_5 ankyrin repeat K06867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 415.0
YHH3_k127_6177864_6 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 385.0
YHH3_k127_6177864_7 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 366.0
YHH3_k127_6177864_8 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003403 268.0
YHH3_k127_6177864_9 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.00000000000000000000000000000000000000000000000000000000000000000002488 235.0
YHH3_k127_6215785_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 1.898e-203 666.0
YHH3_k127_6215785_1 N-4 methylation of cytosine K00590 - 2.1.1.113 0.00007093 47.0
YHH3_k127_6250868_0 TonB-dependent Receptor Plug K02014 - - 3.344e-221 703.0
YHH3_k127_6250868_1 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 435.0
YHH3_k127_6250868_2 PFAM ADP-ribosylation Crystallin J1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 346.0
YHH3_k127_6260823_0 BRO family, N-terminal domain - - - 0.0000000000000000000000000006005 123.0
YHH3_k127_6299288_0 Beta propeller domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 312.0
YHH3_k127_6337025_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 GO:0000166,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007456 482.0
YHH3_k127_6337025_1 cell division protein K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 357.0
YHH3_k127_6337025_2 TonB dependent receptor K02014 - - 0.00000000001505 69.0
YHH3_k127_6421145_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006489 559.0
YHH3_k127_6421145_1 MotA TolQ ExbB proton channel K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004842 284.0
YHH3_k127_6421145_2 TIGRFAM acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.00000000000000000000000000000000009459 137.0
YHH3_k127_6421145_3 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000000000000008646 123.0
YHH3_k127_6421145_4 ThiS family K03154 - - 0.000000000000001359 78.0
YHH3_k127_6421145_5 - - - - 0.0000001547 53.0
YHH3_k127_643215_0 Heat shock 70 kDa protein K04043 - - 0.0 1027.0
YHH3_k127_643215_1 ABC-type multidrug transport system ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 389.0
YHH3_k127_643215_2 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006486 328.0
YHH3_k127_643215_3 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000006608 233.0
YHH3_k127_643215_4 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000000000000000000000000001809 213.0
YHH3_k127_643215_5 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000000000005249 146.0
YHH3_k127_643215_6 - - - - 0.00000000000000000000000002524 121.0
YHH3_k127_643215_7 domain, Protein - - - 0.00000001963 66.0
YHH3_k127_6442003_0 Glycosyl hydrolase family 57 - - - 2.307e-250 779.0
YHH3_k127_6442003_1 Starch synthase catalytic domain K00703 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009011,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 9.177e-244 760.0
YHH3_k127_6442003_10 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000001731 67.0
YHH3_k127_6442003_11 - - - - 0.0000000001697 65.0
YHH3_k127_6442003_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 1.179e-227 712.0
YHH3_k127_6442003_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 515.0
YHH3_k127_6442003_4 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006829 387.0
YHH3_k127_6442003_5 Belongs to the SUA5 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 319.0
YHH3_k127_6442003_6 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 297.0
YHH3_k127_6442003_7 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 GO:0003674,GO:0003824,GO:0004112,GO:0004114,GO:0004115,GO:0005488,GO:0005506,GO:0008081,GO:0008150,GO:0008198,GO:0009987,GO:0016043,GO:0016787,GO:0016788,GO:0042545,GO:0042578,GO:0043167,GO:0043169,GO:0045229,GO:0046872,GO:0046914,GO:0071554,GO:0071555,GO:0071840 3.1.4.53 0.00000000000000000000000000000000000000000000000000000000000000000000005196 247.0
YHH3_k127_6442003_8 May be involved in recombination K03554 - - 0.000000000000000000000000000000000000000000000000000000000000000197 232.0
YHH3_k127_6442003_9 - - - - 0.0000000000000000000000005788 113.0
YHH3_k127_649066_0 Peptidase M16C associated K06972 - - 0.0 1098.0
YHH3_k127_649066_1 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 2.269e-202 646.0
YHH3_k127_649066_10 TIGRFAM lipopolysaccharide heptosyltransferase I K02841 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 374.0
YHH3_k127_649066_11 Belongs to the BI1 family K19416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 325.0
YHH3_k127_649066_12 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006987 304.0
YHH3_k127_649066_13 ATPase. Has a role at an early stage in the morphogenesis of the spore coat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003392 291.0
YHH3_k127_649066_14 X-Pro dipeptidyl-peptidase (S15 family) K07018 - - 0.00000000000000000000000000000000000000000000000000000000000001086 221.0
YHH3_k127_649066_15 Protein of unknown function (DUF2726) - - - 0.0000000000000000000000000000000000000000000000000000001258 205.0
YHH3_k127_649066_16 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.000000000000000000000000000000000000000000000000000003709 197.0
YHH3_k127_649066_17 Heptaprenyl diphosphate synthase component I K00805 - 2.5.1.30 0.00000000000000000000000000000000000000000000000004469 183.0
YHH3_k127_649066_18 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000002317 187.0
YHH3_k127_649066_2 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K15778 - 5.4.2.2,5.4.2.8 1.675e-199 630.0
YHH3_k127_649066_20 - - - - 0.00000000000000000000000000005466 117.0
YHH3_k127_649066_21 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.0000000000000000000000001807 115.0
YHH3_k127_649066_22 - - - - 0.000000000000000000000003009 107.0
YHH3_k127_649066_23 Small GTP-binding protein - - - 0.000000000000000000000007984 113.0
YHH3_k127_649066_24 STAS domain - - - 0.0000000000000000001053 93.0
YHH3_k127_649066_25 Periplasmic binding protein K01999 - - 0.0000000000000000008256 103.0
YHH3_k127_649066_27 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0000000000001999 85.0
YHH3_k127_649066_28 - - - - 0.0000000000003316 71.0
YHH3_k127_649066_3 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008396 510.0
YHH3_k127_649066_30 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000194 46.0
YHH3_k127_649066_4 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003047 505.0
YHH3_k127_649066_5 Heavy metal translocating P-type atpase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 502.0
YHH3_k127_649066_6 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 434.0
YHH3_k127_649066_7 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 400.0
YHH3_k127_649066_8 Lytic murein transglycosylase B K08305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004267 388.0
YHH3_k127_649066_9 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 380.0
YHH3_k127_6538597_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005943 567.0
YHH3_k127_6538597_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 469.0
YHH3_k127_6538597_2 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 378.0
YHH3_k127_6538597_3 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 362.0
YHH3_k127_6538597_4 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 304.0
YHH3_k127_6538597_5 COGs COG5381 conserved - - - 0.000000000000000000000000000000000000000000000002472 179.0
YHH3_k127_6538597_6 Stage II sporulation protein E K07315 - 3.1.3.3 0.0000000000000000000000000000009957 124.0
YHH3_k127_6538597_7 COGs COG5439 conserved - - - 0.0000000000000000000000000006112 116.0
YHH3_k127_6564366_0 PFAM Aminotransferase class I and II K14261 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003086 585.0
YHH3_k127_6564366_1 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000000000000000004248 119.0
YHH3_k127_6570916_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0018130,GO:0019438,GO:0032774,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042493,GO:0042623,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097659,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 0.0 1120.0
YHH3_k127_6570916_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 6.57e-290 909.0
YHH3_k127_6570916_10 Resolvase, N terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000001369 209.0
YHH3_k127_6570916_11 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 GO:0003674,GO:0003676,GO:0003677,GO:0003681,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006417,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016246,GO:0016441,GO:0016458,GO:0017148,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030423,GO:0031047,GO:0031123,GO:0031124,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032268,GO:0032269,GO:0032270,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0035194,GO:0040029,GO:0040033,GO:0043170,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0045974,GO:0045975,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:2000112,GO:2000113 - 0.0000000000000000000000000000000000575 134.0
YHH3_k127_6570916_12 Type I restriction modification DNA specificity domain - - - 0.000000000000000000000003076 106.0
YHH3_k127_6570916_13 TIGRFAM transposase, IS605 OrfB K07496 - - 0.000000000000000001453 87.0
YHH3_k127_6570916_2 M subunit K03427 - 2.1.1.72 9.497e-271 840.0
YHH3_k127_6570916_3 Glycosyl transferases group 1 - - - 2.343e-232 754.0
YHH3_k127_6570916_4 COG2931 RTX toxins and related Ca2 -binding proteins - - - 3.749e-217 734.0
YHH3_k127_6570916_5 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 616.0
YHH3_k127_6570916_6 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 442.0
YHH3_k127_6570916_7 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 392.0
YHH3_k127_6570916_8 ABC transporter K09691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009826 347.0
YHH3_k127_6570916_9 TIGRFAM transposase, IS605 OrfB K07496 - - 0.000000000000000000000000000000000000000000000000000000000000000002696 232.0
YHH3_k127_6580880_0 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 416.0
YHH3_k127_6580880_1 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005807 337.0
YHH3_k127_6580880_2 phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.000000000000000000000000000000000000000000155 160.0
YHH3_k127_6580880_3 Histidine triad (HIT) protein K02503 - - 0.0000000000000000000000000000000000000000004656 160.0
YHH3_k127_6580880_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000239 55.0
YHH3_k127_6593843_1 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000392 163.0
YHH3_k127_6678650_0 PFAM Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 503.0
YHH3_k127_6678650_1 acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 443.0
YHH3_k127_6678650_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000003503 220.0
YHH3_k127_6678650_3 pilus assembly protein PilW K02672 - - 0.0000000000000000000000000000000000000001381 164.0
YHH3_k127_6678650_4 subunit of a heme lyase K02200 - - 0.0000000000000000000000000006685 119.0
YHH3_k127_6678650_5 type IV pilus modification protein PilV K02671 - - 0.00000000000000000000000006099 114.0
YHH3_k127_6678650_6 Transposase domain (DUF772) K07481 - - 0.000000000000006343 76.0
YHH3_k127_6678650_7 Type II transport protein GspH K08084 - - 0.000000000005806 74.0
YHH3_k127_6696295_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007065 588.0
YHH3_k127_6696295_1 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 452.0
YHH3_k127_6696295_2 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 448.0
YHH3_k127_6696295_3 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 428.0
YHH3_k127_6726431_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 501.0
YHH3_k127_6726431_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 359.0
YHH3_k127_6726431_2 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000000000000000000000144 225.0
YHH3_k127_6726431_3 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000000000000389 186.0
YHH3_k127_6726431_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000002031 147.0
YHH3_k127_6726431_5 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000007452 65.0
YHH3_k127_6736740_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 401.0
YHH3_k127_6736740_1 TIGRFAM ATP-dependent DNA helicase, RecQ K03654 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000811 286.0
YHH3_k127_6736740_2 Transposase - - - 0.0000000002598 65.0
YHH3_k127_6768737_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1138.0
YHH3_k127_6768737_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses K01916,K01950 - 6.3.1.5,6.3.5.1 0.0 1050.0
YHH3_k127_6768737_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 438.0
YHH3_k127_6768737_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006083 335.0
YHH3_k127_6768737_4 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000000000000000000006816 232.0
YHH3_k127_6768737_5 Ribosomal protein L17 K02879 - - 0.00000000000000000000000000000000000000000000000000000001227 199.0
YHH3_k127_6768737_6 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000002973 186.0
YHH3_k127_6768737_7 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000000001245 70.0
YHH3_k127_6768737_8 Protein kinase domain - - - 0.00002073 48.0
YHH3_k127_6810617_0 CHAT domain - - - 8.954e-246 782.0
YHH3_k127_6810617_1 TIGRFAM filamentous hemagglutinin family N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 538.0
YHH3_k127_6810617_2 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 454.0
YHH3_k127_6810617_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000001134 194.0
YHH3_k127_6904904_0 2 iron, 2 sulfur cluster binding - - - 0.0 1330.0
YHH3_k127_6904904_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1283.0
YHH3_k127_6904904_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004107 462.0
YHH3_k127_6904904_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003087 254.0
YHH3_k127_6904904_4 PFAM peptidase - - - 0.00000000000000000000000000000000000000000002392 175.0
YHH3_k127_6904904_5 nodulation - - - 0.00000000000000000000000000004541 120.0
YHH3_k127_6904904_6 - - - - 0.00000000000000000381 84.0
YHH3_k127_6904904_7 Protein conserved in bacteria - - - 0.0000002007 58.0
YHH3_k127_6904904_8 - - - - 0.000006736 51.0
YHH3_k127_6927834_0 cytochrome C peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005308 533.0
YHH3_k127_6927834_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 338.0
YHH3_k127_6927834_2 calcium:sodium antiporter activity - - - 0.000000000000000000000000000000000002267 158.0
YHH3_k127_6927834_3 pathogenesis - - - 0.00000000000000008232 95.0
YHH3_k127_6939235_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 3.727e-204 649.0
YHH3_k127_6939235_1 Ammonium transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004446 607.0
YHH3_k127_6939235_2 nitrogen regulatory protein P-II K04751,K04752 - - 0.0000000000000000000000000000000000000000000000000000000002598 203.0
YHH3_k127_6939235_3 Bacterial protein of unknown function (Gcw_chp) - - - 0.0000000000000000000000000000001353 134.0
YHH3_k127_6939235_5 COG3023 Negative regulator of beta-lactamase expression K01447,K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043170,GO:0044424,GO:0044464,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.000000000001094 68.0
YHH3_k127_6964284_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 610.0
YHH3_k127_6964284_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 528.0
YHH3_k127_6964284_10 Domain of unknown function DUF29 - - - 0.0000000000000000000000000000000000000000007 161.0
YHH3_k127_6964284_11 NMT1-like family K02051 - - 0.000000000000000000000000000000000000008141 158.0
YHH3_k127_6964284_12 PFAM FxsA cytoplasmic membrane protein K07113 - - 0.00000000000000000000000000000000007425 138.0
YHH3_k127_6964284_13 TIGRFAM filamentous hemagglutinin family N-terminal domain - - - 0.0000000000000000000000001702 111.0
YHH3_k127_6964284_14 Lysozyme inhibitor LprI - - - 0.0000000000000004263 85.0
YHH3_k127_6964284_2 O-antigen ligase like membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003793 467.0
YHH3_k127_6964284_3 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 368.0
YHH3_k127_6964284_4 Inositol monophosphatase family K01082 - 3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003087 362.0
YHH3_k127_6964284_5 Type II secretion system (T2SS), protein K K02460 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 351.0
YHH3_k127_6964284_6 ROK family K00886 - 2.7.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009447 337.0
YHH3_k127_6964284_7 PFAM Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000002165 223.0
YHH3_k127_6964284_8 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000003568 200.0
YHH3_k127_6964284_9 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000000000000000000000000005926 206.0
YHH3_k127_6965682_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 3.639e-212 681.0
YHH3_k127_6965682_1 mRNA catabolic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000226 244.0
YHH3_k127_6965682_2 Clan AA aspartic protease K06985 - - 0.00000000000000000000000000000000000000000000000000002014 193.0
YHH3_k127_6965682_3 Pentapeptide repeats (9 copies) - - - 0.0000000000000000000000000000000000005357 147.0
YHH3_k127_6965682_4 Putative restriction endonuclease - - - 0.00000000008138 63.0
YHH3_k127_6980514_0 methionine synthase K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 423.0
YHH3_k127_6980514_1 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000003878 131.0
YHH3_k127_6980514_2 Diguanylate cyclase - - - 0.00000009356 60.0
YHH3_k127_6998467_0 Tfp pilus assembly protein tip-associated adhesin PilY1 K02674 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004846 556.0
YHH3_k127_6998467_1 Pterin binding enzyme K00796,K13941 - 2.5.1.15,2.7.6.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009977 317.0
YHH3_k127_6998467_2 - - - - 0.0000000000000000000000000000000000000354 145.0
YHH3_k127_6998467_3 TIGRFAM prepilin-type N-terminal cleavage methylation domain K02655 - - 0.0000000000000000000001725 102.0
YHH3_k127_6998467_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.0000000000000001204 79.0
YHH3_k127_7014589_0 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 300.0
YHH3_k127_7014589_1 cytochrome K08738 - - 0.0000000000000000000000002773 114.0
YHH3_k127_7014589_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000006102 83.0
YHH3_k127_7014589_3 Domain of unknown function (DUF4845) - - - 0.00000000002218 69.0
YHH3_k127_7051939_0 Phosphoglycerol transferase - - - 4.755e-232 733.0
YHH3_k127_7051939_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 2.738e-196 624.0
YHH3_k127_7051939_2 SMART serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 599.0
YHH3_k127_7051939_3 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005124 562.0
YHH3_k127_7051939_4 Forkhead associated domain K00870,K12132 - 2.7.1.37,2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006123 451.0
YHH3_k127_7051939_5 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009498 353.0
YHH3_k127_7051939_6 protein serine/threonine phosphatase activity K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000001645 188.0
YHH3_k127_7051939_7 general secretion pathway protein K02456 - - 0.0000000000000000000000000000000000000000000000004363 179.0
YHH3_k127_7051939_8 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000006424 168.0
YHH3_k127_7051939_9 - - - - 0.0000000009289 61.0
YHH3_k127_7060610_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1144.0
YHH3_k127_7060610_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005037 504.0
YHH3_k127_7060610_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 444.0
YHH3_k127_7060610_3 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 403.0
YHH3_k127_7060610_4 PFAM Glycosyl transferase family 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 391.0
YHH3_k127_7060610_5 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000002336 228.0
YHH3_k127_7060610_6 - - - - 0.00000000000000000000000000000000000000000000000000000000004397 212.0
YHH3_k127_7060610_7 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000000000000000000000000000000008989 181.0
YHH3_k127_7076639_0 Belongs to the N-Me-Phe pilin family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 458.0
YHH3_k127_7076639_1 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 445.0
YHH3_k127_7076639_2 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000003667 224.0
YHH3_k127_7076639_3 Belongs to the ompA family - - - 0.000000000000000000000000000006916 125.0
YHH3_k127_7091283_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004516 512.0
YHH3_k127_7091283_1 Belongs to the glycosyl hydrolase 57 family K22451 - 2.4.1.25 0.000000000000000000000000000000000000000000000001559 175.0
YHH3_k127_7091283_2 Sulfate transporter antisigma-factor antagonist STAS K03321 - - 0.00000000000000000000000000000000000000000008408 176.0
YHH3_k127_7126138_0 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 368.0
YHH3_k127_7126138_1 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding K18005 - 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004701 364.0
YHH3_k127_7126138_2 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 346.0
YHH3_k127_7126138_3 4Fe-4S single cluster domain K18006 - 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 339.0
YHH3_k127_7126138_4 Putative nucleotidyltransferase substrate binding domain K07182 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 323.0
YHH3_k127_7126138_5 PFAM NADH ubiquinone K18007 - 1.12.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008929 305.0
YHH3_k127_7126138_6 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 308.0
YHH3_k127_7126138_7 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003309 262.0
YHH3_k127_7126138_8 dna polymerase iii K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000001163 224.0
YHH3_k127_7126138_9 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 0.0000000000000000000000000000000000000000000000000000000000005345 223.0
YHH3_k127_7135432_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 2.101e-231 723.0
YHH3_k127_7135432_1 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 1.917e-196 624.0
YHH3_k127_7135432_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 577.0
YHH3_k127_7135432_3 Pfam OmpA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001198 284.0
YHH3_k127_7135432_4 Glycosyl transferase, family 2 K00786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001432 283.0
YHH3_k127_7135432_5 LppC putative lipoprotein - - - 0.00000000103 61.0
YHH3_k127_715867_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019904,GO:0022607,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043335,GO:0043933,GO:0044085,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0065003,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003104 611.0
YHH3_k127_715867_1 PFAM aminotransferase class-III K00819,K00821 - 2.6.1.11,2.6.1.13,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007863 313.0
YHH3_k127_715867_2 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006931 296.0
YHH3_k127_715867_3 Protein of unknown function (DUF971) - - - 0.000000000000000000000000000000000000000000000000000005375 191.0
YHH3_k127_715867_4 ABC-type uncharacterized transport system - - - 0.0000000000000000006697 91.0
YHH3_k127_7219795_0 Participates in both transcription termination and antitermination K02600 - - 5.627e-209 660.0
YHH3_k127_7219795_1 PFAM Aminotransferase class I and II K14267 - 2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 517.0
YHH3_k127_7219795_2 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001082 256.0
YHH3_k127_7219795_3 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000000000000000004132 170.0
YHH3_k127_7219795_4 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0000000000000000000000000000000000005362 152.0
YHH3_k127_7245502_0 ATPase associated with various cellular activities, AAA_5 K07712 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005331 601.0
YHH3_k127_7245502_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07708 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 416.0
YHH3_k127_7245502_2 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000001614 155.0
YHH3_k127_7245502_3 cell wall binding repeat - - - 0.00000000004187 76.0
YHH3_k127_7286199_0 elongation factor G K02355 - - 8.905e-259 814.0
YHH3_k127_7286199_1 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 2.204e-197 620.0
YHH3_k127_7286199_2 deoxyhypusine monooxygenase activity K06921 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 320.0
YHH3_k127_7286199_3 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000605 295.0
YHH3_k127_7286199_4 Phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000000007895 190.0
YHH3_k127_7286199_5 PFAM Plasmid maintenance system killer protein - - - 0.0000000000000000000005942 98.0
YHH3_k127_7286199_6 B-1 B cell differentiation K07126,K18197 - 4.2.2.23 0.000000000000007445 88.0
YHH3_k127_7286199_7 - - - - 0.000007298 50.0
YHH3_k127_7293923_0 sucrose synthase K00695 - 2.4.1.13 0.0 1020.0
YHH3_k127_7376004_0 alginic acid biosynthetic process - - - 0.0000000000000000000000000000000000009468 161.0
YHH3_k127_7376004_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000002408 91.0
YHH3_k127_7376004_2 PFAM Fibronectin, type III domain - - - 0.0000001407 60.0
YHH3_k127_7376004_3 Peptidase C14 caspase catalytic subunit p20 - - - 0.0002529 55.0
YHH3_k127_7390210_0 NADH dehydrogenase K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000001146 270.0
YHH3_k127_7390210_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000001012 183.0
YHH3_k127_7435976_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1277.0
YHH3_k127_7435976_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 1.385e-230 718.0
YHH3_k127_7435976_10 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000003897 229.0
YHH3_k127_7435976_11 Competence protein - - - 0.000000000000000000000000000000000000000000000000000000231 201.0
YHH3_k127_7435976_12 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000000000008027 199.0
YHH3_k127_7435976_13 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000000000000002306 151.0
YHH3_k127_7435976_14 PFAM Stage II sporulation E family protein K07315 - 3.1.3.3 0.000000000000000000000000000008007 134.0
YHH3_k127_7435976_15 PFAM Biopolymer transport protein ExbD TolR - - - 0.00000000000000000000000000162 116.0
YHH3_k127_7435976_16 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000000000000001387 113.0
YHH3_k127_7435976_17 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000007772 71.0
YHH3_k127_7435976_18 PFAM MoeZ MoeB domain K21029 - 2.7.7.80 0.00000000004284 65.0
YHH3_k127_7435976_2 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 3.957e-228 719.0
YHH3_k127_7435976_20 - - - - 0.000003172 49.0
YHH3_k127_7435976_21 - - - - 0.0001199 44.0
YHH3_k127_7435976_3 Peptidylprolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 526.0
YHH3_k127_7435976_4 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 440.0
YHH3_k127_7435976_5 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 404.0
YHH3_k127_7435976_6 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 339.0
YHH3_k127_7435976_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006931 262.0
YHH3_k127_7435976_8 Lysin motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000872 246.0
YHH3_k127_7435976_9 Protein of unknown function (DUF2889) - - - 0.000000000000000000000000000000000000000000000000000000000000000002683 231.0
YHH3_k127_7441921_0 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005171 311.0
YHH3_k127_7441921_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000004294 205.0
YHH3_k127_7441921_2 CTP synthase N-terminus K01937 GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 0.0000000000000000000000002326 105.0
YHH3_k127_7528531_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 8.26e-249 792.0
YHH3_k127_7528531_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 2.838e-200 646.0
YHH3_k127_7528531_2 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009735 615.0
YHH3_k127_7528531_3 PELOTA RNA binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 301.0
YHH3_k127_7528531_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000005587 222.0
YHH3_k127_7528531_5 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000006419 211.0
YHH3_k127_7528531_6 Belongs to the ompA family - - - 0.000000000000000000000000000008209 124.0
YHH3_k127_7528531_7 Cytochrome c-type biogenesis protein K02198 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0017003,GO:0017004,GO:0017006,GO:0018063,GO:0019538,GO:0020037,GO:0022607,GO:0031224,GO:0031226,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046906,GO:0048037,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564 - 0.000000000000000000001664 94.0
YHH3_k127_7547455_0 COG3209 Rhs family protein K11021 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 312.0
YHH3_k127_7562491_0 Fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000855 416.0
YHH3_k127_7562491_1 Domain of unknown function DUF29 - - - 0.000000000000000000000000000000000000000000000268 173.0
YHH3_k127_7562491_2 - - - - 0.00000000000000000000000000000000000000005794 158.0
YHH3_k127_7562491_3 Putative cyclase - - - 0.0000000000000000000003267 96.0
YHH3_k127_7569038_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1851.0
YHH3_k127_7569038_1 Glutamate synthase, NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 6.679e-272 844.0
YHH3_k127_7569038_10 TIGRFAM Serine O-acetyltransferase K00640 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009001,GO:0009058,GO:0009069,GO:0009070,GO:0009314,GO:0009333,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016053,GO:0016407,GO:0016412,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019344,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 349.0
YHH3_k127_7569038_11 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 303.0
YHH3_k127_7569038_12 Domain of unknown function (DUF697) K08990 - - 0.000000000000000000000000000000000000000000000000000000001321 214.0
YHH3_k127_7569038_13 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000000000000005555 197.0
YHH3_k127_7569038_14 Protein of unknown function (DUF779) K09959 - - 0.0000000000000000000000000000000000000000000000000002973 186.0
YHH3_k127_7569038_15 Papain-like cysteine protease AvrRpt2 K06992 - - 0.0000000000000000000000000000000000000000001661 167.0
YHH3_k127_7569038_16 domain, Protein K01874,K02230,K02487,K05366,K06596,K11751,K16147,K20470 - 2.4.1.129,2.4.99.16,3.1.3.5,3.4.16.4,3.6.1.45,6.1.1.10,6.6.1.2 0.0000000000000000000000000003728 129.0
YHH3_k127_7569038_17 Protein of unknown function (DUF2970) - - - 0.000000000000007078 77.0
YHH3_k127_7569038_18 TonB-dependent receptor K02014 - - 0.0000000003732 64.0
YHH3_k127_7569038_2 RNB K01147 - 3.1.13.1 3.721e-242 766.0
YHH3_k127_7569038_3 PFAM Archaeal ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006539 518.0
YHH3_k127_7569038_4 YcjX-like family, DUF463 K06918 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002973 497.0
YHH3_k127_7569038_5 TIGRFAM type I secretion outer membrane protein, TolC family K12543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003991 428.0
YHH3_k127_7569038_6 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000386 422.0
YHH3_k127_7569038_7 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 403.0
YHH3_k127_7569038_8 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 400.0
YHH3_k127_7569038_9 TIGRFAM filamentous hemagglutinin family N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 388.0
YHH3_k127_7633481_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009314,GO:0009380,GO:0009381,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0 1384.0
YHH3_k127_7633481_1 PFAM AMP-dependent synthetase and ligase K00666,K01897 - 6.2.1.3 7.088e-214 677.0
YHH3_k127_7633481_10 3'-5' exonuclease K07501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 342.0
YHH3_k127_7633481_11 carboxymethylenebutenolidase activity K01061,K21105 - 3.1.1.102,3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000005478 256.0
YHH3_k127_7633481_12 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000005929 254.0
YHH3_k127_7633481_13 general secretion pathway protein G K02456 - - 0.0000000000000000000000000000000000000000000000000000000000000002203 222.0
YHH3_k127_7633481_14 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000000000000000000000000000001717 222.0
YHH3_k127_7633481_15 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000000000000000000000000005746 220.0
YHH3_k127_7633481_17 COG1335 Amidases related to nicotinamidase - - - 0.00000000000000000000000000000000000000000000000000007639 192.0
YHH3_k127_7633481_18 protein conserved in bacteria - - - 0.0000000000000000008298 87.0
YHH3_k127_7633481_19 Extracellular nuclease K07004 - - 0.000000000000009431 87.0
YHH3_k127_7633481_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 580.0
YHH3_k127_7633481_20 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.00002507 46.0
YHH3_k127_7633481_3 PFAM response regulator receiver K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008202 572.0
YHH3_k127_7633481_4 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008155 516.0
YHH3_k127_7633481_5 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 449.0
YHH3_k127_7633481_6 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 413.0
YHH3_k127_7633481_7 Lipopolysaccharide heptosyltransferase II K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 395.0
YHH3_k127_7633481_8 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 388.0
YHH3_k127_7633481_9 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 345.0
YHH3_k127_7633787_0 D5 N terminal like K06919 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 511.0
YHH3_k127_7633787_1 LRR receptor-like serine threonine-protein kinase - - - 0.000000000000000000001696 106.0
YHH3_k127_7633787_2 Helix-turn-helix domain K07729 - - 0.0000197 50.0
YHH3_k127_7654901_1 PFAM Stage II sporulation E family protein K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008677 314.0
YHH3_k127_7654901_3 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000005653 239.0
YHH3_k127_7654901_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000008826 226.0
YHH3_k127_7654901_5 SMART protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.0000000000000000000000000000000000187 137.0
YHH3_k127_7668637_0 von Willebrand factor (vWF) type A domain K02448 - - 1.357e-241 766.0
YHH3_k127_7668637_1 Bacterial regulatory protein, Fis family K10912 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 570.0
YHH3_k127_7668637_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 395.0
YHH3_k127_7668637_3 Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP- C55) K13007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 387.0
YHH3_k127_7668637_4 epimerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 297.0
YHH3_k127_7668637_5 High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway K06203 - - 0.00000000000000000000000000000000000000000000000000000005179 205.0
YHH3_k127_7672193_0 type II secretion K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000826 479.0
YHH3_k127_7672193_1 oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 425.0
YHH3_k127_7672193_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004408 284.0
YHH3_k127_7672193_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000001341 105.0
YHH3_k127_7672193_4 - - - - 0.00000000000000000000002097 109.0
YHH3_k127_7672193_5 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000001523 113.0
YHH3_k127_7676295_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 5.177e-222 692.0
YHH3_k127_7676295_1 TIGRFAM Outer membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000006676 256.0
YHH3_k127_7676295_2 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.00000000000000000000000000000000000000000000000002034 185.0
YHH3_k127_7676295_3 cellulose binding - - - 0.00000000000000000000000000000000009981 154.0
YHH3_k127_768384_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 3.423e-200 632.0
YHH3_k127_768384_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 471.0
YHH3_k127_768384_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005387 418.0
YHH3_k127_768384_3 Surface antigen variable number K07278 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000502 419.0
YHH3_k127_7742112_0 ABC transporter transmembrane region K06148 - - 2.863e-228 721.0
YHH3_k127_7742112_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 621.0
YHH3_k127_7742112_2 UPF0313 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 284.0
YHH3_k127_7742112_3 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.00000000000003888 72.0
YHH3_k127_7751691_0 FAD linked oxidases, C-terminal domain K06911 - - 0.0 1088.0
YHH3_k127_7751691_1 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 5.086e-225 705.0
YHH3_k127_7751691_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005833 556.0
YHH3_k127_7751691_3 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 443.0
YHH3_k127_7751691_4 major facilitator superfamily K05820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 412.0
YHH3_k127_7751691_5 KR domain K03793 - 1.5.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 307.0
YHH3_k127_7751691_6 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000000138 198.0
YHH3_k127_7751691_7 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000004759 185.0
YHH3_k127_7751691_8 Resolvase, N terminal domain - - - 0.00003872 46.0
YHH3_k127_7751828_0 protein with SCP PR1 domains - - - 0.0000000000009922 73.0
YHH3_k127_7751828_1 1-phosphatidylinositol-4-phosphate 5-kinase activity - - - 0.0000007004 55.0
YHH3_k127_7759530_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1068.0
YHH3_k127_7759530_1 protein conserved in bacteria - - - 0.000000000000000000000000000000001437 132.0
YHH3_k127_7759530_2 Protein of unknown function (DUF433) - - - 0.00000000000000000000000000001465 118.0
YHH3_k127_7911098_0 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 501.0
YHH3_k127_7911098_1 Methyl-accepting chemotaxis protein (MCP) signaling domain K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 503.0
YHH3_k127_7911098_2 probably involved in intracellular septation K06190 - - 0.00000000000000000000000000000000000000000000000000000000000000000001777 238.0
YHH3_k127_7911098_3 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.0000000000000000000000000000000000000000000000000000000000000000002655 235.0
YHH3_k127_7911098_4 HD domain K01139 - 2.7.6.5,3.1.7.2 0.0000000000000000000000000000000000000000000000000000000001432 208.0
YHH3_k127_7911098_5 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000005849 192.0
YHH3_k127_7911098_6 PFAM YCII-related K09780 - - 0.000000000000000000000000000000000000000001395 157.0
YHH3_k127_7911098_7 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000005161 141.0
YHH3_k127_791458_0 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 368.0
YHH3_k127_791458_1 cellulase activity K20276 - - 0.00000000008982 75.0
YHH3_k127_791458_2 pathogenesis - - - 0.0009201 45.0
YHH3_k127_7957061_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1010.0
YHH3_k127_7957061_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 2.929e-224 711.0
YHH3_k127_7957061_10 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 GO:0000166,GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043531,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000004387 174.0
YHH3_k127_7957061_11 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000002103 177.0
YHH3_k127_7957061_12 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.00000000000000000004927 93.0
YHH3_k127_7957061_13 PFAM Transposase, IS605 OrfB, C-terminal - - - 0.0000000000006461 70.0
YHH3_k127_7957061_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 6.584e-220 692.0
YHH3_k127_7957061_3 Restriction endonuclease K00571 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009712 449.0
YHH3_k127_7957061_4 TIGRFAM Hydrogenase accessory protein HypB K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003237 373.0
YHH3_k127_7957061_5 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009682 359.0
YHH3_k127_7957061_6 3-phytase (Myo-inositol-hexaphosphate 3-phosphohydrolase) K01083 - 3.1.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 349.0
YHH3_k127_7957061_7 negative regulation of glucose mediated signaling pathway K01120 GO:0001932,GO:0001933,GO:0003674,GO:0003824,GO:0004112,GO:0004114,GO:0004115,GO:0006139,GO:0006163,GO:0006195,GO:0006198,GO:0006469,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008081,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009187,GO:0009214,GO:0009259,GO:0009261,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010563,GO:0010605,GO:0010646,GO:0010648,GO:0016787,GO:0016788,GO:0018130,GO:0019220,GO:0019222,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0023051,GO:0023057,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0032268,GO:0032269,GO:0033673,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042325,GO:0042326,GO:0042578,GO:0043086,GO:0043549,GO:0043949,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0045859,GO:0045936,GO:0046058,GO:0046068,GO:0046069,GO:0046434,GO:0046483,GO:0046700,GO:0047555,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051174,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0055086,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0071704,GO:0071900,GO:0071901,GO:0072521,GO:0072523,GO:0080090,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1902531,GO:1902659,GO:1902660,GO:2000479,GO:2000480 3.1.4.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004627 300.0
YHH3_k127_7957061_8 Gram-negative porin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003564 283.0
YHH3_k127_7957061_9 secreted protein - - - 0.0000000000000000000000000000000000000000000000001744 186.0
YHH3_k127_7979781_0 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 2.453e-200 634.0
YHH3_k127_7979781_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 416.0
YHH3_k127_7979781_2 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009898,GO:0015232,GO:0015886,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019897,GO:0019898,GO:0022857,GO:0031224,GO:0031234,GO:0032991,GO:0042623,GO:0043190,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051181,GO:0051184,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098533,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:1901678,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.41 0.000000000000000000000000000000000000000000000000000000000000000000000000005633 258.0
YHH3_k127_8058833_0 Domain of unknown function (DUF4914) - - - 2.309e-279 870.0
YHH3_k127_8058833_1 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 1.003e-258 816.0
YHH3_k127_8058833_10 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003278 328.0
YHH3_k127_8058833_11 biosynthesis protein K16710 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003475 286.0
YHH3_k127_8058833_12 O-methyltransferase K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008838 269.0
YHH3_k127_8058833_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006383 264.0
YHH3_k127_8058833_14 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000001035 245.0
YHH3_k127_8058833_15 Protein of unknown function (DUF1318) - - - 0.0000000000000000000000000000000000000000000000000000000000000003446 225.0
YHH3_k127_8058833_16 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000000000000000000002474 221.0
YHH3_k127_8058833_17 Copper resistance protein D - - - 0.000000000000000000000000000000000000000002819 159.0
YHH3_k127_8058833_18 PFAM Rhodanese-like domain - - - 0.000000000000000000000000000000000000005267 147.0
YHH3_k127_8058833_19 Protein of unknown function (DUF2809) - - - 0.000000000000000000000000000000000005524 140.0
YHH3_k127_8058833_2 family UPF0027 K14415 - 6.5.1.3 1.18e-238 760.0
YHH3_k127_8058833_20 Poly(hydroxyalcanoate) granule associated protein (phasin) - - - 0.000000000000000000000000000000001497 133.0
YHH3_k127_8058833_21 Domain of Unknown Function (DUF928) - - - 0.0000000000000000003257 96.0
YHH3_k127_8058833_22 Sterol carrier protein - - - 0.0000000001189 67.0
YHH3_k127_8058833_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 580.0
YHH3_k127_8058833_4 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004143 546.0
YHH3_k127_8058833_5 type I secretion outer membrane protein, TolC K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 460.0
YHH3_k127_8058833_6 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 450.0
YHH3_k127_8058833_7 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000893 417.0
YHH3_k127_8058833_8 Glycosyl Transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 395.0
YHH3_k127_8058833_9 class II (D, K and N) K04568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 350.0
YHH3_k127_8133602_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 4.572e-279 865.0
YHH3_k127_8133602_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 614.0
YHH3_k127_8133602_10 Cold shock protein domain K03704 - - 0.0000000001067 67.0
YHH3_k127_8133602_11 - - - - 0.0006667 44.0
YHH3_k127_8133602_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 581.0
YHH3_k127_8133602_3 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 508.0
YHH3_k127_8133602_4 PFAM Type II secretion system protein E K02670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002966 433.0
YHH3_k127_8133602_5 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 417.0
YHH3_k127_8133602_6 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006625 340.0
YHH3_k127_8133602_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006116 259.0
YHH3_k127_8133602_8 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000000001038 160.0
YHH3_k127_8133602_9 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000004654 155.0
YHH3_k127_824108_0 Putative amidoligase enzyme (DUF2126) - - - 0.0 1733.0
YHH3_k127_824108_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046 - 1.1.1.69 0.000000000000000000000000000000000000000000000000000000000000000000000000000863 262.0
YHH3_k127_8283224_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.351e-241 752.0
YHH3_k127_8283224_1 LeuA allosteric (dimerisation) domain K09011 - 2.3.1.182 2.317e-234 734.0
YHH3_k127_8283224_10 PFAM Rhodanese-like K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000001704 188.0
YHH3_k127_8283224_11 regulatory protein, arsR - - - 0.00000000000000000000000000000000000000000000000004759 181.0
YHH3_k127_8283224_12 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000000000000000000000000000000005356 171.0
YHH3_k127_8283224_13 - - - - 0.000000000000000000000000000006673 124.0
YHH3_k127_8283224_14 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000000000000000000000007311 119.0
YHH3_k127_8283224_15 Metallophosphoesterase K07098 - - 0.000000000001045 72.0
YHH3_k127_8283224_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 486.0
YHH3_k127_8283224_3 1,4-alpha-glucan branching enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 437.0
YHH3_k127_8283224_4 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 411.0
YHH3_k127_8283224_5 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003445 400.0
YHH3_k127_8283224_6 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002916 381.0
YHH3_k127_8283224_7 phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001091 292.0
YHH3_k127_8283224_8 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000009809 222.0
YHH3_k127_8283224_9 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000000000000000000000000000000002051 201.0
YHH3_k127_8283877_0 PFAM von Willebrand factor type A domain K02448 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 590.0
YHH3_k127_8287598_0 AAA domain - - - 0.0 1137.0
YHH3_k127_8287598_1 PFAM response regulator receiver - - - 4.806e-228 713.0
YHH3_k127_8287598_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 1.22e-199 632.0
YHH3_k127_8287598_3 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 471.0
YHH3_k127_8287598_4 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 421.0
YHH3_k127_8287598_5 trisaccharide binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 402.0
YHH3_k127_8315384_0 Histidine kinase K03320,K03406,K03407,K07315 - 2.7.13.3,3.1.3.3 0.0 1556.0
YHH3_k127_8315384_1 ATP:ADP antiporter activity - - - 9.66e-290 917.0
YHH3_k127_8315384_2 NfeD-like C-terminal, partner-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 447.0
YHH3_k127_8315384_3 lipoprotein K04754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007774 282.0
YHH3_k127_8315384_4 cyclic nucleotide binding K01999,K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000003983 233.0
YHH3_k127_8315384_5 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000006042 222.0
YHH3_k127_8315384_6 response regulator, receiver K03413 - - 0.00000000000000000000000000000000000000000000000000000002275 200.0
YHH3_k127_8315384_7 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000001927 192.0
YHH3_k127_8315384_8 - - - - 0.000000000000000001191 96.0
YHH3_k127_8325373_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 4.993e-198 623.0
YHH3_k127_8325373_1 PFAM Type II IV secretion system protein K02670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006673 598.0
YHH3_k127_8325373_10 protein acetylation - - - 0.0000000000000000000000000000000000005209 146.0
YHH3_k127_8325373_11 - K06950 - - 0.0000004301 54.0
YHH3_k127_8325373_2 twitching motility protein K02670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 599.0
YHH3_k127_8325373_3 twitching motility protein PilT K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000993 550.0
YHH3_k127_8325373_4 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 548.0
YHH3_k127_8325373_5 fad dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 363.0
YHH3_k127_8325373_6 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 317.0
YHH3_k127_8325373_7 - - - - 0.000000000000000000000000000000000000000000000000000000000008194 214.0
YHH3_k127_8325373_8 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000003304 194.0
YHH3_k127_8325373_9 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000000000005728 156.0
YHH3_k127_8333039_0 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 6.825e-247 775.0
YHH3_k127_8333039_1 PFAM porin, Gram-negative type - - - 0.00000005883 64.0
YHH3_k127_8366243_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 2.513e-266 829.0
YHH3_k127_8366243_1 - - - - 0.000000000000000000004361 93.0
YHH3_k127_8381182_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC - - - 0.0 1262.0
YHH3_k127_8381182_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 2.794e-210 664.0
YHH3_k127_8381182_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001605 265.0
YHH3_k127_8381182_3 Tellurite resistance K05793 - - 0.00000000000000000000000000000000000000000000002974 174.0
YHH3_k127_8381182_4 Leucine-rich repeat K13730 - - 0.0000000000000000000000000000000000000000000004978 175.0
YHH3_k127_8381182_5 Tellurite resistance K05793 - - 0.00000000000000000000000000000000000000000001212 174.0
YHH3_k127_8381182_6 CDGSH-type zinc finger. Function unknown. - - - 0.0000000000000000000000000007769 114.0
YHH3_k127_8381182_7 PFAM Mo-dependent nitrogenase K05793,K05795 - - 0.00000000000000000001187 103.0
YHH3_k127_8422451_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.601e-243 755.0
YHH3_k127_8422451_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03407 - 2.7.13.3 4.206e-200 649.0
YHH3_k127_8422451_2 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 297.0
YHH3_k127_8422451_3 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000000000000000000000000000000002087 238.0
YHH3_k127_8422451_4 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000001893 229.0
YHH3_k127_8422451_5 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000000006284 190.0
YHH3_k127_8422451_6 response regulator receiver K03413 - - 0.000000000000000000000000000000000000000000000004079 174.0
YHH3_k127_8422451_7 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000001603 139.0
YHH3_k127_8422451_8 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0019954,GO:0022402,GO:0022414,GO:0030428,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044464,GO:0051301 - 0.000000000286 63.0
YHH3_k127_8431493_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474 - - 7.631e-197 621.0
YHH3_k127_8431493_1 NAD(P)H-binding K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000908 535.0
YHH3_k127_8431493_2 Sulfotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007154 343.0
YHH3_k127_8431493_3 HAD-hyrolase-like K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005723 332.0
YHH3_k127_8431493_4 Glycosyltransferase like family 2 K16870 - 2.4.1.289 0.0000000000000000000000000000000000000000000000000000000000000005556 234.0
YHH3_k127_8431493_5 - - - - 0.00000000000000000000000000000000000000000000000148 184.0
YHH3_k127_849566_0 HD domain - - - 1.006e-236 743.0
YHH3_k127_849566_1 Belongs to the HypD family K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 563.0
YHH3_k127_849566_2 COG1352 Methylase of chemotaxis methyl-accepting proteins K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002905 435.0
YHH3_k127_849566_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 377.0
YHH3_k127_849566_4 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007386 304.0
YHH3_k127_849566_5 cofactor biosynthesis protein NifB K02585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 306.0
YHH3_k127_849566_6 protein-glutamate methylesterase K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000001445 255.0
YHH3_k127_8530335_0 associated with various cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 565.0
YHH3_k127_8530335_1 Putative metallopeptidase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 540.0
YHH3_k127_8530335_2 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 427.0
YHH3_k127_8530335_3 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004198 334.0
YHH3_k127_8530335_4 Glycosyl hydrolase family 57 - - - 0.000000000000000000000000000000000000000000000000001502 188.0
YHH3_k127_8530335_5 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000007607 135.0
YHH3_k127_8530335_6 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000482 89.0
YHH3_k127_8591152_0 STAS domain - - - 1.751e-195 626.0
YHH3_k127_8591152_1 Signal Transduction Histidine Kinase K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009492 571.0
YHH3_k127_8591152_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 495.0
YHH3_k127_8591152_3 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009028 449.0
YHH3_k127_8591152_4 mercury ion transmembrane transporter activity K07213 - - 0.0000000000004063 70.0
YHH3_k127_8601982_0 magnesium chelatase K07391 - - 4.479e-236 738.0
YHH3_k127_8601982_1 Involved in the processing of the 5'end of 16S rRNA K08301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002295 608.0
YHH3_k127_8601982_2 DNA repair exonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007721 552.0
YHH3_k127_8601982_3 ABC-2 type transporter K09690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000734 356.0
YHH3_k127_8601982_5 Putative member of DMT superfamily (DUF486) K09922 - - 0.000000000000000000000000000000000000000000000000000000001719 202.0
YHH3_k127_8601982_6 Subtilase family K14645 - - 0.000000000000000000000000000000000008201 149.0
YHH3_k127_8601982_7 Membrane fusogenic activity K09806 - - 0.0000000000000000000009762 97.0
YHH3_k127_8609770_0 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009944 507.0
YHH3_k127_8609770_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 - - 0.00000000002146 64.0
YHH3_k127_8609770_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000005854 55.0
YHH3_k127_8644266_0 Multicopper oxidase - - - 5.19e-257 801.0
YHH3_k127_8644266_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004182 563.0
YHH3_k127_8644266_2 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 477.0
YHH3_k127_8644266_3 auxin efflux carrier K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 306.0
YHH3_k127_8644266_4 PFAM Copper resistance protein B precursor (CopB) K07233 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000382 274.0
YHH3_k127_8644266_5 General Secretion Pathway protein K02457 - - 0.00000000000000000000000427 106.0
YHH3_k127_8645541_0 Serine Threonine protein kinase - - - 1.884e-205 706.0
YHH3_k127_8645541_1 PFAM Peptidase family M48 K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 517.0
YHH3_k127_8645541_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005553 273.0
YHH3_k127_8645541_3 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000002946 168.0
YHH3_k127_8645541_4 PFAM NB-ARC domain - - - 0.000000000000000000000000000000000002254 141.0
YHH3_k127_8645541_5 Cytochrome c - - - 0.0000000000000003489 82.0
YHH3_k127_8645541_6 serine-type aminopeptidase activity - - - 0.00000000003763 69.0
YHH3_k127_8645541_7 response regulator receiver - - - 0.00000000241 59.0
YHH3_k127_8680086_0 Circularly permuted ATP-grasp type 2 - - - 0.0 1074.0
YHH3_k127_8680086_1 Histidine kinase K17292 - - 0.00000000000000000000000000000000000007519 144.0
YHH3_k127_8721431_0 PFAM Protein kinase domain K00384,K03407,K11527 - 1.8.1.9,2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 570.0
YHH3_k127_8721431_1 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 491.0
YHH3_k127_8721431_2 belongs to the aldehyde dehydrogenase family K22445 - 1.2.99.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006869 370.0
YHH3_k127_8721431_3 Methyltransferase type 11 K00570 - 2.1.1.17,2.1.1.71 0.000000000000000000000000000000000000000000000000000000000000000000000004549 250.0
YHH3_k127_8721431_4 PFAM L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000001852 222.0
YHH3_k127_8721431_5 - - - - 0.0000000000000000002893 91.0
YHH3_k127_8782358_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 3.717e-196 619.0
YHH3_k127_8782358_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526,K03676 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 543.0
YHH3_k127_8782358_2 Tellurite resistance protein TehB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 402.0
YHH3_k127_8782358_3 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 305.0
YHH3_k127_8797860_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 2.811e-226 710.0
YHH3_k127_8797860_1 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 396.0
YHH3_k127_8797860_2 Acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000006038 267.0
YHH3_k127_8799414_0 Glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 1354.0
YHH3_k127_8799414_1 Belongs to the ABC transporter superfamily K02031,K02032 - - 3.423e-224 706.0
YHH3_k127_8799414_10 PFAM GumN family protein K09973 - - 0.0000000000000000000000000000000000000000000000000000000000005822 222.0
YHH3_k127_8799414_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 1.62e-216 686.0
YHH3_k127_8799414_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 583.0
YHH3_k127_8799414_4 Transposase, IS605 OrfB family K07496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 499.0
YHH3_k127_8799414_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 452.0
YHH3_k127_8799414_6 TIGRFAM filamentous hemagglutinin family N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007784 445.0
YHH3_k127_8799414_7 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 394.0
YHH3_k127_8799414_8 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007646 358.0
YHH3_k127_8799414_9 Uncharacterised protein family (UPF0014) K02069 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 287.0
YHH3_k127_8803949_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 587.0
YHH3_k127_8803949_1 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002567 593.0
YHH3_k127_8803949_2 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 526.0
YHH3_k127_8803949_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 499.0
YHH3_k127_8803949_4 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008853 463.0
YHH3_k127_8803949_5 TIGRFAM filamentous hemagglutinin family N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000002135 203.0
YHH3_k127_8803949_6 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000003315 59.0
YHH3_k127_8855561_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000004312 243.0
YHH3_k127_8855561_1 HAD-superfamily hydrolase, subfamily IIB K00696,K07024 - 2.4.1.14,3.1.3.24 0.0000000000000000000000000000000000002792 142.0
YHH3_k127_8858621_0 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000002631 260.0
YHH3_k127_8858621_1 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000001959 196.0
YHH3_k127_8858621_2 HEAT repeats - - - 0.000000001305 71.0
YHH3_k127_8864238_0 PFAM MoeZ MoeB domain K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 297.0
YHH3_k127_8864238_1 Competence protein - - - 0.00000000000000000000000000000002568 129.0
YHH3_k127_8864238_2 Dimerisation domain - - - 0.0008996 43.0
YHH3_k127_891469_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 582.0
YHH3_k127_891469_1 Phosphate transport system permease protein K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 511.0
YHH3_k127_891469_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002114 467.0
YHH3_k127_891469_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 360.0
YHH3_k127_8950484_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 2.413e-302 936.0
YHH3_k127_8950484_1 Esterase-like activity of phytase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005019 310.0
YHH3_k127_8950484_2 TIGRFAM Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001919 267.0
YHH3_k127_8950484_3 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000002207 222.0
YHH3_k127_8950484_4 COG1055 Na H antiporter NhaD and related arsenite permeases - - - 0.000000000000000000000009448 100.0
YHH3_k127_8950484_5 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.000000000000000000000171 101.0
YHH3_k127_8953636_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F K01414 - 3.4.24.70 2.989e-285 890.0
YHH3_k127_8953636_1 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004151 425.0
YHH3_k127_8953636_2 Sel1 domain protein repeat-containing protein K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000007526 231.0
YHH3_k127_8953636_3 MotA TolQ ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000000003855 201.0
YHH3_k127_8953636_4 biopolymer transport protein K03559 - - 0.000000000000000000000000000000000000000007007 158.0
YHH3_k127_8953636_5 Uncharacterized conserved protein (DUF2304) K09153 - - 0.00000000000000000000000000000000000000002265 155.0
YHH3_k127_8953636_6 Small-conductance mechanosensitive channel K05802 - - 0.000176 44.0
YHH3_k127_8965399_0 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007285 394.0
YHH3_k127_8965399_1 transcriptional regulatory protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443 372.0
YHH3_k127_8965399_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 300.0
YHH3_k127_8965399_3 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002632 283.0
YHH3_k127_8965399_4 Thiol disulfide interchange protein K02199 - - 0.00000000000000000000000000000000000000000000000000000000000000001651 228.0
YHH3_k127_8965399_5 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. - - - 0.00000000000000000000000000000000000000000000000000000009717 207.0
YHH3_k127_8970131_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1020.0
YHH3_k127_8970131_1 TonB-dependent Receptor Plug K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 553.0
YHH3_k127_8970131_10 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003066 271.0
YHH3_k127_8970131_11 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000001833 258.0
YHH3_k127_8970131_12 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000003301 243.0
YHH3_k127_8970131_13 Belongs to the skp family K06142 - - 0.00000000000000000000000000000000000000000000000000009736 191.0
YHH3_k127_8970131_14 Domain of unknown function (DUF4154) - - - 0.00000000000000000000000000000004237 132.0
YHH3_k127_8970131_15 PIN domain - - - 0.000000000000000000000000000000304 126.0
YHH3_k127_8970131_2 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 460.0
YHH3_k127_8970131_3 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 433.0
YHH3_k127_8970131_4 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 428.0
YHH3_k127_8970131_5 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 383.0
YHH3_k127_8970131_6 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003646 377.0
YHH3_k127_8970131_7 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000515 361.0
YHH3_k127_8970131_8 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 355.0
YHH3_k127_8970131_9 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 342.0
YHH3_k127_89718_0 sister chromatid segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000172 248.0
YHH3_k127_89718_1 cellulase activity - - - 0.00000000000000000000000000000000000000000000001107 190.0
YHH3_k127_8984074_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.235e-321 994.0
YHH3_k127_8984074_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 6.795e-252 781.0
YHH3_k127_8984074_2 response regulator receiver K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 535.0
YHH3_k127_8984074_3 - K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000009232 233.0
YHH3_k127_8998083_0 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 390.0
YHH3_k127_8998083_1 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007269 269.0
YHH3_k127_8998083_2 ATP synthase I chain K02116 - - 0.000000000000000000000000000000004406 132.0
YHH3_k127_8998083_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000000002751 118.0
YHH3_k127_8998083_4 TonB-dependent Receptor Plug K02014 - - 0.00000000000000000000003057 103.0
YHH3_k127_8998083_5 PFAM Uncharacterised protein family UPF0150 - - - 0.0000000000000000000008381 95.0
YHH3_k127_8998083_6 mRNA binding - - - 0.000000000000003412 77.0
YHH3_k127_8999508_0 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000002182 164.0
YHH3_k127_9045884_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 1.459e-221 694.0
YHH3_k127_9045884_1 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 556.0
YHH3_k127_9045884_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 476.0
YHH3_k127_9053903_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 584.0
YHH3_k127_9053903_1 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000005264 205.0
YHH3_k127_9053903_2 TIGRFAM FimV C-terminal domain K08086 - - 0.00000000000000000000000000000000000000000664 159.0
YHH3_k127_9053903_3 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008897,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0018070,GO:0018193,GO:0018209,GO:0018215,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 2.7.8.7 0.000000000000000000000000000000000000002597 149.0
YHH3_k127_9053903_4 General secretion pathway protein I K02458 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000000000000000000006882 125.0
YHH3_k127_9053903_5 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED - - - 0.00000000000000002212 81.0
YHH3_k127_9053903_6 Beta-propeller repeat - - - 0.000001588 60.0
YHH3_k127_9066638_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.102e-248 774.0
YHH3_k127_9066638_1 Type II and III secretion system protein - - - 1.899e-209 674.0
YHH3_k127_9066638_10 Pfam HNH endonuclease - - - 0.0000000000000000000000000004315 117.0
YHH3_k127_9066638_11 Glycosyl transferase family 2 - - - 0.0000000000000000000000000732 114.0
YHH3_k127_9066638_12 Produces ATP from ADP in the presence of a proton gradient across the membrane - - - 0.00000000000000000000009138 106.0
YHH3_k127_9066638_13 COG0739 Membrane proteins related to metalloendopeptidases K21472 - - 0.00000000000000000001098 93.0
YHH3_k127_9066638_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 491.0
YHH3_k127_9066638_3 PFAM FAD dependent oxidoreductase K03153 - 1.4.3.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 399.0
YHH3_k127_9066638_4 TonB-dependent Receptor Plug Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007476 346.0
YHH3_k127_9066638_5 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.0000000000000000000000000000000000000000000000000000000000000000000000001116 255.0
YHH3_k127_9066638_6 PFAM CYTH domain - - - 0.000000000000000000000000000000000000000000000000000001759 197.0
YHH3_k127_9066638_7 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000398 171.0
YHH3_k127_9066638_8 ATP synthase subunit C K02124 - - 0.0000000000000000000000000000000000000000752 155.0
YHH3_k127_9066638_9 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.00000000000000000000000000007505 119.0
YHH3_k127_910033_0 N-6 DNA Methylase - - - 6.123e-272 857.0
YHH3_k127_910033_1 TonB-dependent Receptor Plug K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000306 559.0
YHH3_k127_910033_2 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 361.0
YHH3_k127_910033_3 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005374 301.0
YHH3_k127_910033_4 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000004638 205.0
YHH3_k127_910033_5 Protein of unknown function DUF262 - - - 0.0000001886 55.0
YHH3_k127_9100635_0 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 284.0
YHH3_k127_9100635_1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K01447,K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043170,GO:0044424,GO:0044464,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000002416 239.0
YHH3_k127_9113171_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0 1137.0
YHH3_k127_9113171_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K03601,K04564 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0044237,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.1,3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 344.0
YHH3_k127_9113171_2 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000000001817 267.0
YHH3_k127_9113171_3 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000002002 239.0
YHH3_k127_9113171_4 Hemerythrin HHE cation binding domain K07216 - - 0.000000000000000000000000000000000000000000000000003057 184.0
YHH3_k127_9215655_0 Histidine kinase - - - 0.0 1093.0
YHH3_k127_9215655_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005561 526.0
YHH3_k127_9215655_2 Type II secretion system (T2SS), protein K K02460 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 304.0
YHH3_k127_9215655_3 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 293.0
YHH3_k127_9215655_4 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000003889 204.0
YHH3_k127_9215655_5 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.00000000000000000000001246 101.0
YHH3_k127_9299873_0 Right handed beta helix region - - - 0.0000000007151 73.0
YHH3_k127_9330246_0 PFAM ORF6N domain - - - 0.0000000000000000001761 96.0
YHH3_k127_9330246_1 guanyl-nucleotide exchange factor activity K01387,K07114,K12287 - 3.4.24.3 0.0000000000001185 83.0
YHH3_k127_9330246_2 repressor - - - 0.000000000001245 73.0
YHH3_k127_9356696_0 PhoQ Sensor K01768,K16923,K19694 - 4.6.1.1 1.341e-297 968.0
YHH3_k127_9356696_1 LmbE family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004119 489.0
YHH3_k127_9356696_2 PFAM secretion protein HlyD - - - 0.000000000000000000000000000000000000000000000000000000000000001429 225.0
YHH3_k127_9367321_0 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 436.0
YHH3_k127_9367321_1 Proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 0.00000000000000000000002807 103.0
YHH3_k127_9367321_2 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000004814 60.0
YHH3_k127_9392566_0 PFAM Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 575.0
YHH3_k127_9392566_1 Squalene phytoene synthase K00801 - 2.5.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005939 424.0
YHH3_k127_9392566_2 - - - - 0.000000000000000000000000000000000000000000000000002828 193.0
YHH3_k127_9392566_3 Protein of unknown function (DUF559) - - - 0.0000000000000000000000000001411 119.0
YHH3_k127_9392566_4 Tetratricopeptide repeat - - - 0.000000000000000006289 93.0
YHH3_k127_9395948_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.627e-270 840.0
YHH3_k127_9395948_1 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000005985 206.0
YHH3_k127_9395948_2 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000003208 124.0
YHH3_k127_941978_0 Large extracellular alpha-helical protein K06894 - - 0.0 2211.0
YHH3_k127_941978_1 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 9.54e-263 814.0
YHH3_k127_941978_2 secondary active sulfate transmembrane transporter activity K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 455.0
YHH3_k127_941978_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 439.0
YHH3_k127_941978_4 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 380.0
YHH3_k127_941978_5 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533 - 3.6.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 366.0
YHH3_k127_941978_6 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 345.0
YHH3_k127_941978_7 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000596 312.0
YHH3_k127_941978_8 Peptidyl-prolyl cis-trans isomerase K03773 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000007414 268.0
YHH3_k127_941978_9 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000002605 213.0
YHH3_k127_9445542_0 Belongs to the aldehyde dehydrogenase family K00138 - - 2.529e-289 892.0
YHH3_k127_9445542_1 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005141 413.0
YHH3_k127_9445542_2 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008408 410.0
YHH3_k127_9445542_3 cAMP biosynthetic process - - - 0.0000000000000000000000000000000000000006101 155.0
YHH3_k127_9445542_4 Protein of unknown function (DUF2442) - - - 0.00000000000000000000000003852 108.0
YHH3_k127_9445542_5 acr, cog1565 - - - 0.0000000000000000001767 102.0
YHH3_k127_9491533_0 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000001955 200.0
YHH3_k127_9561811_0 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003938 342.0
YHH3_k127_9561811_1 glycolate biosynthetic process K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000001155 232.0
YHH3_k127_9561811_2 Evidence 4 Homologs of previously reported genes of K09700 - - 0.0000000000000000000000000000000000000000000000002232 177.0
YHH3_k127_9561811_3 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000002341 83.0
YHH3_k127_9568372_0 PFAM CBS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 579.0
YHH3_k127_9568372_1 TIGRFAM TIGR00266 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000398 284.0
YHH3_k127_9568372_2 paraquat-inducible protein A K03808 - - 0.0000000003294 63.0
YHH3_k127_9592167_0 TIGRFAM amino acid adenylation domain - - - 0.0 1675.0
YHH3_k127_9592167_1 carbamoyl transferase, NodU family K00612 - - 6.217e-308 954.0
YHH3_k127_9592167_10 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001096 249.0
YHH3_k127_9592167_11 acid phosphatase activity K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000007947 234.0
YHH3_k127_9592167_12 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000000005584 201.0
YHH3_k127_9592167_13 Pfam Rhodanese-like - - - 0.00000000000000000000000000000000000000000000000001418 183.0
YHH3_k127_9592167_14 Dual specificity phosphatase, catalytic domain - - - 0.000000000000000000000000000000000000000000000003843 177.0
YHH3_k127_9592167_15 of membrane protease K07340 - - 0.0000000000000000000000000000000009077 135.0
YHH3_k127_9592167_17 COG0587 DNA polymerase III, alpha subunit K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0000000000000004459 80.0
YHH3_k127_9592167_18 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.000000002297 63.0
YHH3_k127_9592167_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 8.439e-236 737.0
YHH3_k127_9592167_3 actin actin family protein K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000281 504.0
YHH3_k127_9592167_4 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 478.0
YHH3_k127_9592167_5 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000712 394.0
YHH3_k127_9592167_6 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 347.0
YHH3_k127_9592167_7 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000798 336.0
YHH3_k127_9592167_8 Vancomycin high temperature exclusion protein K03748 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0042221,GO:0042493,GO:0044425,GO:0044464,GO:0050896,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000011 272.0
YHH3_k127_9592167_9 Involved in chromosome partitioning - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006935 271.0
YHH3_k127_9597316_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003991 512.0
YHH3_k127_9597316_1 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008524 402.0
YHH3_k127_9597316_2 TIGRFAM phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000304 328.0
YHH3_k127_9604595_0 Glycosyl Transferase K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 569.0
YHH3_k127_9604595_1 PFAM D12 class N6 adenine-specific DNA methyltransferase K06223 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 353.0
YHH3_k127_9608069_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 3.929e-206 647.0
YHH3_k127_9608069_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 524.0
YHH3_k127_9608069_10 Protein of unknown function (DUF3301) - - - 0.000000009094 61.0
YHH3_k127_9608069_11 Bacteriophage CI repressor helix-turn-helix domain - - - 0.000928 50.0
YHH3_k127_9608069_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 304.0
YHH3_k127_9608069_3 PFAM Cytochrome C1 K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 297.0
YHH3_k127_9608069_4 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005053 274.0
YHH3_k127_9608069_5 PFAM Uncharacterised protein family (UPF0227) K07000 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003727 260.0
YHH3_k127_9608069_6 PFAM Stringent starvation protein B K03600 - - 0.00000000000000000000000000000000000009164 147.0
YHH3_k127_9608069_7 nucleotidyltransferase activity K07075 - - 0.000000000000000000000000000000006171 128.0
YHH3_k127_9608069_8 - - - - 0.0000000000000000000000000000000226 130.0
YHH3_k127_9608069_9 PFAM DoxX family protein K15977 - - 0.000000000000000000004107 94.0
YHH3_k127_9624408_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1168.0
YHH3_k127_9624408_1 B-1 B cell differentiation - - - 3.233e-201 668.0
YHH3_k127_9624408_2 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 364.0
YHH3_k127_9624408_3 Protein of unknown function (DUF3050) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 317.0
YHH3_k127_9624408_4 transmembrane transport K02035,K15580 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006810,GO:0006811,GO:0006820,GO:0006857,GO:0006869,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010876,GO:0015711,GO:0015718,GO:0015721,GO:0015833,GO:0015849,GO:0015850,GO:0030288,GO:0030313,GO:0031975,GO:0033036,GO:0033218,GO:0042277,GO:0042597,GO:0042886,GO:0042939,GO:0044464,GO:0046942,GO:0050896,GO:0051179,GO:0051234,GO:0061077,GO:0071702,GO:0071705,GO:1900750 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004202 290.0
YHH3_k127_9624408_5 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 - - 0.0000000000000000000000000000001634 140.0
YHH3_k127_9624408_6 type II and III secretion system protein K02453 - - 0.000000000006679 78.0
YHH3_k127_9624408_7 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0001588 51.0
YHH3_k127_9684782_0 malic enzyme K00029 - 1.1.1.40 1.258e-294 922.0
YHH3_k127_9684782_1 TIGRFAM amino acid adenylation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 618.0
YHH3_k127_9715494_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 414.0
YHH3_k127_9715494_1 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 372.0
YHH3_k127_9737138_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 1.386e-238 755.0
YHH3_k127_9737138_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 5.95e-212 664.0
YHH3_k127_9737138_2 COG0846 NAD-dependent protein deacetylases, SIR2 family K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 304.0
YHH3_k127_9737138_3 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000000000000000000000001173 184.0
YHH3_k127_9737138_4 transcriptional - - - 0.00000000000000000000000000000000000000005581 154.0
YHH3_k127_9743157_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000001147 221.0
YHH3_k127_976204_0 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000304 271.0
YHH3_k127_976204_1 LysM domain K01448,K08307,K19223,K22278 - 3.5.1.104,3.5.1.28 0.000000000000000000000000000000000000000000000000003001 196.0
YHH3_k127_9806491_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 1.43e-321 993.0
YHH3_k127_9806491_1 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 1.518e-252 794.0
YHH3_k127_9806491_10 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003435 270.0
YHH3_k127_9806491_11 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001157 259.0
YHH3_k127_9806491_12 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000001112 241.0
YHH3_k127_9806491_13 Belongs to the globin family K05916 - 1.14.12.17 0.00000000000000000000000000000000000000000001906 165.0
YHH3_k127_9806491_14 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000001009 146.0
YHH3_k127_9806491_15 PFAM Isoprenylcysteine carboxyl methyltransferase - - - 0.000000000000000000000000000004134 128.0
YHH3_k127_9806491_16 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.000000000000000000000000107 107.0
YHH3_k127_9806491_2 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 1.052e-228 728.0
YHH3_k127_9806491_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 8.991e-220 690.0
YHH3_k127_9806491_4 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 601.0
YHH3_k127_9806491_5 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 492.0
YHH3_k127_9806491_6 Glycosyl Transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004865 407.0
YHH3_k127_9806491_7 PFAM short chain dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 319.0
YHH3_k127_9806491_8 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005602 298.0
YHH3_k127_9806491_9 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001181 286.0
YHH3_k127_9827363_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000745 537.0
YHH3_k127_9827363_1 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005648 319.0
YHH3_k127_9827363_2 2-oxoglutarate dehydrogenase, E1 component K00164 - 1.2.4.2 0.00000000000000000000000000000000000000000000003962 175.0
YHH3_k127_9827363_3 protein serine/threonine phosphatase activity - - - 0.00000000000000000000000001036 118.0
YHH3_k127_9827363_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000002985 72.0
YHH3_k127_9827363_6 - - - - 0.0000005349 59.0
YHH3_k127_9833164_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1085.0
YHH3_k127_9833164_1 Glycosyl hydrolase family 57 - - - 5.759e-212 672.0
YHH3_k127_9833164_2 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 516.0
YHH3_k127_9833164_3 Carbon-nitrogen hydrolase K11206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 352.0
YHH3_k127_9837112_0 Circularly permuted ATP-grasp type 2 - - - 5.046e-267 826.0
YHH3_k127_9837112_1 FAD linked oxidases, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005845 550.0
YHH3_k127_9837112_2 A predicted alpha-helical domain with a conserved ER motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002981 449.0
YHH3_k127_9837112_3 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000000000000000000000000005783 225.0
YHH3_k127_9837112_4 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 - - 0.000000000000000000000000000000000000000000000000000000000001593 211.0
YHH3_k127_9837112_5 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000004608 197.0
YHH3_k127_9837112_6 - - - - 0.0000000000000000000000000000000000000002973 153.0
YHH3_k127_9837112_7 - - - - 0.000000000000000002386 92.0
YHH3_k127_9841322_0 Histidine kinase - - - 0.0 1060.0
YHH3_k127_9841322_1 NMT1-like family K02051 - - 0.000000000000000000000000000000000000000000000000002137 194.0
YHH3_k127_9841322_2 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000006077 140.0
YHH3_k127_9841322_3 - - - - 0.000001224 55.0
YHH3_k127_9855571_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 6.76e-223 706.0
YHH3_k127_9855571_1 Belongs to the beta-ketoacyl-ACP synthases family K00647,K09458 - 2.3.1.179,2.3.1.41 3.663e-199 627.0
YHH3_k127_9855571_10 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000005396 258.0
YHH3_k127_9855571_11 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002312 255.0
YHH3_k127_9855571_12 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004423 247.0
YHH3_k127_9855571_13 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000000000000000004616 135.0
YHH3_k127_9855571_14 - - - - 0.0000000000000000004961 87.0
YHH3_k127_9855571_15 Peptidase, M23 K21471 - - 0.00000000000001383 85.0
YHH3_k127_9855571_16 Bacterial transglutaminase-like N-terminal - - - 0.00000001568 56.0
YHH3_k127_9855571_17 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.0000001017 57.0
YHH3_k127_9855571_2 PFAM Glycosyl transferase, family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 476.0
YHH3_k127_9855571_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000776 475.0
YHH3_k127_9855571_4 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 464.0
YHH3_k127_9855571_5 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 409.0
YHH3_k127_9855571_6 methionine synthase K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0030312,GO:0032259,GO:0042084,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 407.0
YHH3_k127_9855571_7 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 359.0
YHH3_k127_9855571_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004908 334.0
YHH3_k127_9855571_9 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 290.0
YHH3_k127_9875078_0 Flavocytochrome c sulphide dehydrogenase, flavin-binding K17229 - 1.8.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000924 501.0
YHH3_k127_9875078_1 Belongs to the peptidase S1C family K04771,K04772 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 490.0
YHH3_k127_9875078_10 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000002908 241.0
YHH3_k127_9875078_11 ADP-Ribose Pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000005408 239.0
YHH3_k127_9875078_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000436 239.0
YHH3_k127_9875078_13 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000006507 227.0
YHH3_k127_9875078_14 pathogenesis - - - 0.0000000000000000000000000000000005202 152.0
YHH3_k127_9875078_15 Helix-turn-helix domain - - - 0.00000000000000000000000000000002215 139.0
YHH3_k127_9875078_16 COG0589 Universal stress protein UspA and related K14055 - - 0.0000000000000000000000000000009028 134.0
YHH3_k127_9875078_17 F5/8 type C domain - - - 0.0000000000000000000000000005958 132.0
YHH3_k127_9875078_18 Protein of unknown function (DUF465) - - - 0.00000000000000000000008727 99.0
YHH3_k127_9875078_19 InterPro IPR003367 - - - 0.00000000000000004069 96.0
YHH3_k127_9875078_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 453.0
YHH3_k127_9875078_20 cellulose binding K15924 - 3.2.1.136 0.00000000001799 78.0
YHH3_k127_9875078_21 - - - - 0.000000003462 70.0
YHH3_k127_9875078_22 Helix-turn-helix - - - 0.00008771 53.0
YHH3_k127_9875078_23 PFAM Transposase, IS605 OrfB, C-terminal - - - 0.0006291 42.0
YHH3_k127_9875078_24 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0006343 43.0
YHH3_k127_9875078_3 Glycosyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009992 411.0
YHH3_k127_9875078_4 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 405.0
YHH3_k127_9875078_5 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 358.0
YHH3_k127_9875078_6 N-Acetylmuramoyl-L-alanine amidase K01447,K03806,K11066 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 322.0
YHH3_k127_9875078_7 sterol desaturase K00227 - 1.14.19.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 288.0
YHH3_k127_9875078_8 CHASE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003566 293.0
YHH3_k127_9875078_9 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003314 267.0
YHH3_k127_9885378_0 MotA TolQ ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 300.0
YHH3_k127_9885378_1 LemA family - - - 0.0000000000000000000000000000000000000000000000000002576 194.0
YHH3_k127_9885378_2 biopolymer transport protein K03559 - - 0.00000000000001839 74.0
YHH3_k127_9885378_3 Belongs to the peptidase S8 family K14645 GO:0005575,GO:0005576 - 0.0000000000008461 82.0
YHH3_k127_9890862_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 9.395e-317 982.0
YHH3_k127_9890862_1 synthase subunit 1 K01648 GO:0003674,GO:0003824,GO:0003878,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006084,GO:0006085,GO:0006091,GO:0006101,GO:0006139,GO:0006163,GO:0006164,GO:0006629,GO:0006631,GO:0006633,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009346,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016999,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046394,GO:0046483,GO:0046912,GO:0051186,GO:0051188,GO:0055086,GO:0071616,GO:0071704,GO:0072330,GO:0072350,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.3.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 406.0
YHH3_k127_9890862_2 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016071,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031123,GO:0031124,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000008353 101.0
YHH3_k127_9890862_3 SmpA / OmlA family - - - 0.00002454 50.0
YHH3_k127_9891210_0 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000002867 131.0
YHH3_k127_9891210_2 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000003912 126.0
YHH3_k127_9891210_3 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000004073 108.0
YHH3_k127_9966710_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K10715 - 2.7.13.3 0.0 1438.0
YHH3_k127_9966710_1 Proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 1.116e-278 865.0
YHH3_k127_9966710_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000000000000000000001307 167.0
YHH3_k127_9966710_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.00000000000000000000000005325 111.0
YHH3_k127_9966710_2 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 8.089e-229 722.0
YHH3_k127_9966710_3 Methyl-accepting chemotaxis protein (MCP) signaling domain K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006297 565.0
YHH3_k127_9966710_4 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 524.0
YHH3_k127_9966710_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004397 518.0
YHH3_k127_9966710_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001187 274.0
YHH3_k127_9966710_7 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 - - - 0.00000000000000000000000000000000000000000000000000000000000000003673 228.0
YHH3_k127_9966710_8 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000003767 228.0
YHH3_k127_9966710_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331,K05582 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000001633 226.0
YHH3_k127_998972_0 TIGRFAM nudix-type nucleoside diphosphatase, YffH AdpP family K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000001026 260.0
YHH3_k127_998972_1 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000002588 145.0
YHH3_k127_998972_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05889,K12678 - 1.1.2.6 0.00000000000000000001079 110.0
YHH3_k127_998972_3 Zinc-dependent metalloprotease K01406 - 3.4.24.40 0.0001035 57.0