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Overview

ID MAG04590
Name YHH3_bin.60
Sample SMP0123
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order JAADHS01
Family JAADHS01
Genus JAKACW01
Species
Assembly information
Completeness (%) 80.89
Contamination (%) 2.78
GC content (%) 57.0
N50 (bp) 8,213
Genome size (bp) 2,877,799

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2696

Gene name Description KEGG GOs EC E-value Score Sequence
YHH3_k127_10001052_0 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000004313 145.0
YHH3_k127_10001052_1 diguanylate cyclase - - - 0.0000000000000000009103 98.0
YHH3_k127_10017468_0 Secretin N-terminal domain K02453,K12282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 414.0
YHH3_k127_10017468_1 AAA domain K02450,K12283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006846 348.0
YHH3_k127_10017468_2 Pilus assembly protein K12279 - - 0.0000000000000000000000000000000000000006029 160.0
YHH3_k127_10017468_3 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K12280 - - 0.0000000000000001733 88.0
YHH3_k127_10017468_4 cell adhesion K02650 - - 0.0000000000001996 74.0
YHH3_k127_10017468_5 PFAM Fimbrial assembly family protein - - - 0.0000000000002703 78.0
YHH3_k127_10017468_6 Prokaryotic N-terminal methylation motif - - - 0.0001756 51.0
YHH3_k127_10017468_7 Prokaryotic N-terminal methylation motif K10926 - - 0.0002068 51.0
YHH3_k127_10017468_8 - K12281 - - 0.0003865 49.0
YHH3_k127_10024372_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 2.834e-319 987.0
YHH3_k127_10024372_1 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0008654,GO:0008759,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004628 490.0
YHH3_k127_10024372_2 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005124 411.0
YHH3_k127_10024372_3 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 291.0
YHH3_k127_10024372_4 Protein of unknown function (DUF721) - - - 0.00000001038 62.0
YHH3_k127_10036835_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 1.181e-262 830.0
YHH3_k127_10036835_1 PFAM Citrate transporter - - - 6.772e-194 617.0
YHH3_k127_10036835_10 His Kinase A (phospho-acceptor) domain K02484,K07645 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 348.0
YHH3_k127_10036835_11 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 333.0
YHH3_k127_10036835_12 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 327.0
YHH3_k127_10036835_13 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000073 304.0
YHH3_k127_10036835_14 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008286 270.0
YHH3_k127_10036835_15 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000009379 240.0
YHH3_k127_10036835_16 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000001737 190.0
YHH3_k127_10036835_17 helix_turn_helix, Lux Regulon K07689 - - 0.000000000000000000000000000000000000000003975 164.0
YHH3_k127_10036835_18 Belongs to the universal ribosomal protein uS2 family K02967 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000006036 158.0
YHH3_k127_10036835_19 Belongs to the skp family K06142 - - 0.00000000000000000000000000000000000009869 149.0
YHH3_k127_10036835_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006428 519.0
YHH3_k127_10036835_20 DNA repair protein - - - 0.0000000000000000000000007452 111.0
YHH3_k127_10036835_21 - - - - 0.0000000000000004967 86.0
YHH3_k127_10036835_22 - - - - 0.00000007628 59.0
YHH3_k127_10036835_3 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 491.0
YHH3_k127_10036835_4 zinc metalloprotease K11749 GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016021,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0043170,GO:0043856,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0045152,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:0140110,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006272 462.0
YHH3_k127_10036835_5 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007863 381.0
YHH3_k127_10036835_6 Double sensory domain of two-component sensor kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 399.0
YHH3_k127_10036835_7 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 376.0
YHH3_k127_10036835_8 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 365.0
YHH3_k127_10036835_9 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 353.0
YHH3_k127_10041315_0 Thymidine phosphorylase K00758 - 2.4.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003812 609.0
YHH3_k127_10041315_1 COG0501 Zn-dependent protease with chaperone function - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 318.0
YHH3_k127_10041315_2 N-terminal domain of ribose phosphate pyrophosphokinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002693 292.0
YHH3_k127_10041315_3 Protein of unknown function (DUF1614) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000158 247.0
YHH3_k127_10041315_4 Tetratricopeptide repeat K12284 - - 0.00000000000000000002764 97.0
YHH3_k127_10041595_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.17e-209 660.0
YHH3_k127_10041595_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 485.0
YHH3_k127_10041595_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000000000000000004791 186.0
YHH3_k127_10041595_11 Ribosomal protein L17 K02879 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000777 185.0
YHH3_k127_10041595_12 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000000000000000001337 163.0
YHH3_k127_10041595_13 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000000000005858 162.0
YHH3_k127_10041595_14 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000001164 146.0
YHH3_k127_10041595_15 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046677,GO:0050896,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000003323 108.0
YHH3_k127_10041595_16 Ribosomal protein L30 K02907 - - 0.0000000000000000003048 88.0
YHH3_k127_10041595_17 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000001667 73.0
YHH3_k127_10041595_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007374 323.0
YHH3_k127_10041595_3 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 300.0
YHH3_k127_10041595_4 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003243 254.0
YHH3_k127_10041595_5 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009484 246.0
YHH3_k127_10041595_6 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000000000000000000003379 224.0
YHH3_k127_10041595_7 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000000000000000002363 219.0
YHH3_k127_10041595_8 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000002274 200.0
YHH3_k127_10041595_9 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000000000000371 186.0
YHH3_k127_10046565_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 1.343e-262 836.0
YHH3_k127_10046565_1 6-bladed beta-propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008694 325.0
YHH3_k127_10046565_2 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000002945 157.0
YHH3_k127_10046565_3 NHL repeat - - - 0.0000000001191 73.0
YHH3_k127_10046565_4 Electron transfer DM13 - - - 0.000003477 59.0
YHH3_k127_10047511_0 6-phosphogluconate dehydrogenase, NAD-binding K00020,K00042 - 1.1.1.31,1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004307 346.0
YHH3_k127_10047511_1 PFAM Citrate transporter - - - 0.0000000000000000000000000000000000004246 145.0
YHH3_k127_10047511_2 Cyclic nucleotide-binding domain - - - 0.000000000000000000000003061 110.0
YHH3_k127_10047511_3 PFAM Response regulator receiver domain K07689 - - 0.0000000000000000000001835 108.0
YHH3_k127_10047511_4 - - - - 0.00000000000000000001995 102.0
YHH3_k127_10047511_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000118 78.0
YHH3_k127_10107165_0 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 537.0
YHH3_k127_10107165_1 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005084 507.0
YHH3_k127_10107165_10 Belongs to the BolA IbaG family K05527 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008360,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0022603,GO:0022604,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000004243 128.0
YHH3_k127_10107165_11 Protein of unknown function (DUF615) K09889 - - 0.000000000000000000000002727 110.0
YHH3_k127_10107165_12 Protein of unknown function (DUF465) - - - 0.00000000000000000000001025 102.0
YHH3_k127_10107165_13 PilZ domain - - - 0.000000000000000000001207 102.0
YHH3_k127_10107165_14 Type II secretion system protein B K02451 - - 0.0000001646 54.0
YHH3_k127_10107165_15 Protein of unknown function (DUF2390) - - - 0.000001248 57.0
YHH3_k127_10107165_2 tRNA synthetases class I (E and Q), catalytic domain K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 317.0
YHH3_k127_10107165_3 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 314.0
YHH3_k127_10107165_4 Double sensory domain of two-component sensor kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002695 299.0
YHH3_k127_10107165_5 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002556 245.0
YHH3_k127_10107165_6 - - - - 0.00000000000000000000000000000000000000000000000000000008324 199.0
YHH3_k127_10107165_7 - - - - 0.000000000000000000000000000000000000001558 149.0
YHH3_k127_10107165_8 WLM domain K07043 - - 0.00000000000000000000000000000000000001077 155.0
YHH3_k127_10107165_9 - - - - 0.000000000000000000000000000000006105 138.0
YHH3_k127_10128841_0 Tfp pilus assembly protein tip-associated adhesin K02674 - - 6.466e-281 900.0
YHH3_k127_10128841_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003239 391.0
YHH3_k127_10128841_2 Glycolate oxidase iron-sulfur subunit K11473 - - 0.00000000000000000000000000000000000000000000000000000000000002796 218.0
YHH3_k127_10128841_3 Prokaryotic N-terminal methylation motif K02671 - - 0.000000000000000000000000000000002742 137.0
YHH3_k127_10128841_4 Type IV Pilus-assembly protein W K02672 - - 0.000000000000000000000000000001672 133.0
YHH3_k127_10128841_5 COG4968 Tfp pilus assembly protein PilE K02655 - - 0.000000000000000000001571 102.0
YHH3_k127_10128841_6 Prepilin K08084 - - 0.000000000000000001638 92.0
YHH3_k127_10128841_7 Pilus assembly protein PilX K02673 - - 0.0001658 50.0
YHH3_k127_10176270_0 Outer membrane protein beta-barrel family K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 445.0
YHH3_k127_10176270_2 Periplasmic sensor domain - - - 0.00000005367 63.0
YHH3_k127_10212056_0 Diguanylate cyclase - - - 1.447e-195 626.0
YHH3_k127_10212056_1 His Kinase A (phospho-acceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006208 358.0
YHH3_k127_10212056_2 SMART Signal transduction response regulator, receiver region - - - 0.0000000000000000000000000000000000000000000000000000000000001347 218.0
YHH3_k127_10212056_3 COG4970 Tfp pilus assembly protein FimT K08084 - - 0.0000009869 57.0
YHH3_k127_10233043_0 COGs COG1033 exporter of the RND superfamily protein K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 353.0
YHH3_k127_10233043_1 Sh3 type 3 domain protein - - - 0.000000000000000000000000000000000000000000000000000002958 211.0
YHH3_k127_10233043_2 Thioredoxin-like - - - 0.00000000000000000000000000000000009846 140.0
YHH3_k127_10233043_3 Domain of unknown function (DUF4266) - - - 0.0001508 50.0
YHH3_k127_1046938_0 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 - 5.99.1.3 4.295e-227 717.0
YHH3_k127_1046938_1 DNA topoisomerase VI subunit A K03166 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 573.0
YHH3_k127_1046938_2 1,4-alpha-glucan branching enzyme K00700 - 2.4.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 305.0
YHH3_k127_1046938_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002874 262.0
YHH3_k127_1046938_4 Type II/IV secretion system protein K02670 - - 0.00000000000000000000000000000006063 127.0
YHH3_k127_10514010_0 asparagine K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009416 356.0
YHH3_k127_10514010_1 RmlD substrate binding domain K01784,K02473,K03274,K08678 - 4.1.1.35,5.1.3.2,5.1.3.20,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000948 325.0
YHH3_k127_10514010_2 transmembrane transcriptional regulator (Anti-sigma factor) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005317 244.0
YHH3_k127_10514010_3 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000002314 207.0
YHH3_k127_10514010_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000001968 170.0
YHH3_k127_10514010_5 Domain of unknown function DUF11 - - - 0.00000000000000000000009421 111.0
YHH3_k127_10514010_6 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000004523 85.0
YHH3_k127_10521073_0 Sel1 domain protein repeat-containing protein K07126 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 525.0
YHH3_k127_10521073_1 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001695 282.0
YHH3_k127_10521073_2 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000002601 234.0
YHH3_k127_10521073_3 TIGRFAM outer membrane autotransporter barrel - - - 0.0000000000000000000000000000000000000000000000000000001571 214.0
YHH3_k127_10521073_4 OmpA family - - - 0.000000000000000000000000004065 117.0
YHH3_k127_10521073_5 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0002991 53.0
YHH3_k127_10527117_0 Transketolase, pyrimidine binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003985 549.0
YHH3_k127_10527117_1 Dehydrogenase E1 component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 526.0
YHH3_k127_10527117_2 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000628 454.0
YHH3_k127_10527117_3 Type II/IV secretion system protein K02670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007534 435.0
YHH3_k127_10527117_4 5'-nucleotidase, C-terminal domain K01119 - 3.1.3.6,3.1.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006268 335.0
YHH3_k127_10564814_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 2.5e-249 776.0
YHH3_k127_10564814_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003425 566.0
YHH3_k127_10564814_2 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 524.0
YHH3_k127_10564814_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004486,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0019752,GO:0034641,GO:0042558,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0055114,GO:0071704,GO:1901360,GO:1901564 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 416.0
YHH3_k127_10564814_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 351.0
YHH3_k127_10564814_5 FimV C-terminal K08086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 316.0
YHH3_k127_10586093_0 HupE / UreJ protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003654 267.0
YHH3_k127_10586093_1 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000002619 194.0
YHH3_k127_10586093_2 Belongs to the P(II) protein family K04751,K04752 - - 0.0000000000000000000000003126 108.0
YHH3_k127_10586093_3 peptidyl-tyrosine sulfation - - - 0.0000000000000001438 86.0
YHH3_k127_1059899_0 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 331.0
YHH3_k127_1059899_1 transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004697 332.0
YHH3_k127_1059899_2 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K00404 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007515 267.0
YHH3_k127_1059899_4 cytochrome - - - 0.0000000000000000000000000000000000000000000000000000000000000009154 226.0
YHH3_k127_1059899_5 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000003248 186.0
YHH3_k127_1059899_6 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000002147 180.0
YHH3_k127_10599649_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 291.0
YHH3_k127_10599649_1 O-acyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000004847 231.0
YHH3_k127_10599649_2 Heparinase II - - - 0.00000000000000000000000000000002136 130.0
YHH3_k127_10599649_3 Putative beta-barrel porin 2 - - - 0.0000000000000000000001636 111.0
YHH3_k127_10599649_4 Glycosyltransferase like family 2 - - - 0.00000000000000000006585 96.0
YHH3_k127_10608120_0 glutamine amidotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006672 347.0
YHH3_k127_10608120_1 Phosphate-starvation-inducible E K13256 - - 0.000000000000000000000000000000000004029 141.0
YHH3_k127_10608120_2 - - - - 0.0000000000000000000000008817 109.0
YHH3_k127_10608120_3 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000003762 102.0
YHH3_k127_10628265_0 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 371.0
YHH3_k127_10628265_1 Domain of unknown function (DUF4154) - - - 0.000000000000000000009217 99.0
YHH3_k127_10628265_2 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.00000000000000000001208 96.0
YHH3_k127_10628265_3 diguanylate cyclase activity K21021 - 2.7.7.65 0.000002543 54.0
YHH3_k127_10649625_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 3.73e-199 637.0
YHH3_k127_10649625_1 - - - - 0.00000000000000000000000000000000000000000000004896 175.0
YHH3_k127_10649625_2 protein conserved in bacteria K19166 - - 0.000000000000000000000000000001891 121.0
YHH3_k127_10649625_3 Resolvase, N terminal domain - - - 0.00000000004487 65.0
YHH3_k127_10666265_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000002104 184.0
YHH3_k127_10666265_1 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.00001217 53.0
YHH3_k127_10666265_2 SPW repeat - - - 0.00002464 52.0
YHH3_k127_1071986_0 Protein involved in meta-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 331.0
YHH3_k127_1071986_1 Multi-copper K08100,K14588 GO:0003674,GO:0003824,GO:0004322,GO:0005488,GO:0005507,GO:0005575,GO:0005623,GO:0006950,GO:0008150,GO:0008152,GO:0009636,GO:0010035,GO:0010038,GO:0010273,GO:0016491,GO:0016679,GO:0016682,GO:0016722,GO:0016724,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0043167,GO:0043169,GO:0044464,GO:0046688,GO:0046872,GO:0046914,GO:0050896,GO:0055114,GO:0061687,GO:0097501,GO:0098754,GO:1990169 1.3.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007371 325.0
YHH3_k127_1071986_2 Transcriptional regulatory protein, C terminal K07662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001039 266.0
YHH3_k127_1071986_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07640 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000006506 258.0
YHH3_k127_1071986_4 Protein of unknown function (DUF533) - - - 0.00000000000000000000000000000000000000000002546 169.0
YHH3_k127_1071986_5 Cupin 4 family protein - - - 0.0000000000004862 79.0
YHH3_k127_1072505_0 Glucose-1-phosphate adenylyltransferase K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 573.0
YHH3_k127_1072505_1 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000343 261.0
YHH3_k127_1072505_2 CheC-like family K03409 - - 0.000000000000000000000000000002526 126.0
YHH3_k127_1072505_3 Belongs to the ompA family - - - 0.00000000000000000000003259 101.0
YHH3_k127_1072505_4 Predicted membrane protein (DUF2238) K08984 - - 0.00000006569 55.0
YHH3_k127_10733886_0 Transcriptional regulatory protein, C terminal K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000004703 237.0
YHH3_k127_10733886_1 COG3104 Dipeptide tripeptide permease K03305 - - 0.000000000000000000000000000000000000000000000000000000000000835 219.0
YHH3_k127_10733886_2 aminopeptidase activity - - - 0.000000000000000000000000000000001464 144.0
YHH3_k127_10733886_3 Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins K13643 GO:0003674,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000009331 114.0
YHH3_k127_1073823_0 Pyridine nucleotide-disulphide oxidoreductase K00362,K05297 - 1.18.1.1,1.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009007 358.0
YHH3_k127_1073823_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001044 269.0
YHH3_k127_1073823_2 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000000000000000000000000000000001176 175.0
YHH3_k127_1073823_3 ATPases involved in chromosome partitioning K03496 - - 0.00000000000000000000000000000000000002387 148.0
YHH3_k127_1073823_4 rubredoxin - - - 0.0000000000000000000000000001199 115.0
YHH3_k127_10744824_0 Acetoacetyl-CoA synthase K01907 - 6.2.1.16 1.225e-286 893.0
YHH3_k127_10744824_1 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 1.188e-208 655.0
YHH3_k127_10744824_2 Belongs to the citrate synthase family K01659 - 2.3.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009808 491.0
YHH3_k127_10744824_3 COG0119 Isopropylmalate homocitrate citramalate synthases K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004103 375.0
YHH3_k127_10744824_4 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K01841,K03417 - 4.1.3.30,5.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 329.0
YHH3_k127_10744824_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002065 280.0
YHH3_k127_10744824_6 enoyl-CoA hydratase K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000594 276.0
YHH3_k127_10843125_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 534.0
YHH3_k127_10843125_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 463.0
YHH3_k127_10843125_2 peptidylprolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 456.0
YHH3_k127_10843125_3 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 403.0
YHH3_k127_10843125_4 Belongs to the ABC transporter superfamily K02031,K02032,K13896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006574 267.0
YHH3_k127_10843125_5 Protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000001595 240.0
YHH3_k127_10843125_6 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.000000000000000000000000000000000000000000000004379 178.0
YHH3_k127_10843125_7 - - - - 0.000000000000001801 88.0
YHH3_k127_10906000_0 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 6.234e-290 911.0
YHH3_k127_10906000_1 Belongs to the sulfate adenylyltransferase family K00958,K13811 - 2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 579.0
YHH3_k127_10906000_2 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006455 462.0
YHH3_k127_10906000_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007206 254.0
YHH3_k127_10906000_4 Pilus assembly protein PilO K02664 - - 0.000000000000000000000000000000000000000000000000000000000000000002607 234.0
YHH3_k127_10906000_5 MoaE protein K03635 - 2.8.1.12 0.0000000000000000000000000000000000000000000001462 171.0
YHH3_k127_10906000_6 COG3166 Tfp pilus assembly protein PilN K02663 - - 0.0000000000000000000000000000000000000000000005369 175.0
YHH3_k127_10906000_7 pilus assembly protein PilP K02665 - - 0.000000000000000000000000000000000000000000002413 171.0
YHH3_k127_10906000_8 (Type IV) pilus K02507,K02666 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 - 0.0000000000005587 76.0
YHH3_k127_10906000_9 Sel1-like repeats. K07126 - - 0.00001802 53.0
YHH3_k127_1094687_0 Sel1-like repeats. K07126 - - 0.0000000000000000000000000000000000002862 152.0
YHH3_k127_1094687_1 Pkd domain containing protein - - - 0.0000000000000001218 93.0
YHH3_k127_10948755_0 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 380.0
YHH3_k127_10948755_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004496 341.0
YHH3_k127_10948755_2 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000007063 258.0
YHH3_k127_10948755_3 PFAM glycosyl transferase family 35 K00688 - 2.4.1.1 0.0000000000000000000006427 98.0
YHH3_k127_10948755_4 histidine kinase A domain protein - - - 0.00003 56.0
YHH3_k127_10977870_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008784,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0034645,GO:0036361,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 400.0
YHH3_k127_10977870_1 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001045 269.0
YHH3_k127_10977870_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001216 264.0
YHH3_k127_10977870_3 Belongs to the P(II) protein family - - - 0.0000000000000007831 81.0
YHH3_k127_10977870_4 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.00000000008607 73.0
YHH3_k127_10977870_5 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00003453 51.0
YHH3_k127_11044549_0 1-aminocyclopropane-1-carboxylate deaminase K01505 - 3.5.99.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001878 296.0
YHH3_k127_11044549_1 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005182 286.0
YHH3_k127_11044549_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000001204 228.0
YHH3_k127_11044549_3 lipolytic protein G-D-S-L family K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000001487 221.0
YHH3_k127_11044549_4 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component K02004 - - 0.000000000000000000000000000000000000000000000000000144 193.0
YHH3_k127_11044549_5 PFAM Amino acid-binding ACT K03567 - - 0.000000000000000000000000000000000000000003371 161.0
YHH3_k127_11044549_6 Belongs to the multicopper oxidase YfiH RL5 family K05810 GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016679,GO:0016682,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0046983,GO:0055114 - 0.0000000000000000000000000000000000004154 141.0
YHH3_k127_11044549_7 Outer membrane lipoprotein-sorting protein - - - 0.0000000001082 72.0
YHH3_k127_11044549_8 Outer membrane protein beta-barrel domain - - - 0.00009995 51.0
YHH3_k127_11083568_0 Modulator of DNA gyrase K03568 - - 3.404e-214 674.0
YHH3_k127_11083568_1 Zn-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 554.0
YHH3_k127_11083568_10 Uncharacterized protein conserved in bacteria (DUF2059) - - - 0.00000000001492 74.0
YHH3_k127_11083568_2 DNA-3-methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 288.0
YHH3_k127_11083568_3 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001648 294.0
YHH3_k127_11083568_4 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001034 284.0
YHH3_k127_11083568_5 Lytic murein transglycosylase K08305 - - 0.0000000000000000000000000003004 115.0
YHH3_k127_11083568_6 - - - - 0.000000000000000000000002184 107.0
YHH3_k127_11083568_7 PFAM porin Gram-negative type - - - 0.000000000000000000000003767 116.0
YHH3_k127_11083568_8 Sulfurtransferase - - - 0.000000000000000000006799 94.0
YHH3_k127_11083568_9 Cupin 2, conserved barrel domain protein - - - 0.000000000001284 71.0
YHH3_k127_1116393_0 RNA pseudouridylate synthase K06175 - 5.4.99.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 292.0
YHH3_k127_1116393_1 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002159 289.0
YHH3_k127_1116393_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.000000000000000000000000000000000000000000000000000000000001067 212.0
YHH3_k127_1116393_4 ABC transporter K15738 - - 0.00000000000002155 74.0
YHH3_k127_11206834_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0001130,GO:0001131,GO:0001141,GO:0001217,GO:0002161,GO:0002196,GO:0003674,GO:0003700,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006355,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009451,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0016597,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0052689,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:0140110,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 6.1.1.7 0.0 1105.0
YHH3_k127_11206834_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005596 445.0
YHH3_k127_11206834_2 Modulates RecA activity K03565 - - 0.0000000000000000000000003523 111.0
YHH3_k127_11227168_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 3.326e-279 876.0
YHH3_k127_11227168_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 7.659e-215 673.0
YHH3_k127_11227168_2 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 445.0
YHH3_k127_11227168_3 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.0000000000000000000000000000000499 129.0
YHH3_k127_11254309_0 Glycosyl hydrolase 36 superfamily, catalytic domain - - - 0.0 1683.0
YHH3_k127_11254309_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1047.0
YHH3_k127_11254309_2 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K15777 - - 0.00000000000000000000000000000000000000000000000000000004088 199.0
YHH3_k127_11254309_3 Domain of Unknown Function (DUF748) - - - 0.000000000000000000000000000000000000000000000000000004311 217.0
YHH3_k127_11254309_4 Belongs to the small heat shock protein (HSP20) family - - - 0.00000000000000000000000000000000000000001447 156.0
YHH3_k127_112720_0 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000008204 199.0
YHH3_k127_112720_1 Specifically methylates the guanosine in position 1516 of 16S rRNA K15984 - 2.1.1.242 0.0000000000000000000000000000000000000000003684 167.0
YHH3_k127_112720_2 smart pdz dhr glgf - - - 0.000000000000000000000000000000000000000003449 169.0
YHH3_k127_112720_3 - - - - 0.0000000000001514 75.0
YHH3_k127_11272751_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002666 269.0
YHH3_k127_11272751_1 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004925 257.0
YHH3_k127_11272751_2 sigma factor activity K02405 - - 0.00000000000000000000000000000000000000000000005013 179.0
YHH3_k127_11272751_3 Type III flagellar switch regulator (C-ring) FliN C-term K02417 - - 0.000000000000001005 82.0
YHH3_k127_11272751_5 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000000000281 73.0
YHH3_k127_11272751_6 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000000002317 70.0
YHH3_k127_11272751_7 - - - - 0.0000000002181 63.0
YHH3_k127_11272751_8 flagellar motor switch protein FliM K02416 - - 0.0004005 46.0
YHH3_k127_11272751_9 Rhs Family - - - 0.0009642 46.0
YHH3_k127_11281119_0 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 331.0
YHH3_k127_11281119_1 polyphosphate kinase 2 - - - 0.0000000000000000008615 86.0
YHH3_k127_11281119_2 - - - - 0.0000000000000004667 81.0
YHH3_k127_11384219_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006285 267.0
YHH3_k127_11384219_1 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000002506 203.0
YHH3_k127_11384219_3 - - - - 0.0000000000000000000000000000000000000000000000000413 194.0
YHH3_k127_11384219_4 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000001765 168.0
YHH3_k127_11490144_0 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 3.305e-274 861.0
YHH3_k127_11490144_1 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 537.0
YHH3_k127_11490144_2 Amidohydrolase K01686 - 4.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 405.0
YHH3_k127_11490144_3 Major facilitator superfamily K08227 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005501 379.0
YHH3_k127_11490144_4 Permease K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 297.0
YHH3_k127_11490144_5 Permease YjgP YjgQ family K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002106 280.0
YHH3_k127_11490144_6 SprA-related family - - - 0.000000000000000000000000000000009036 137.0
YHH3_k127_11490144_7 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.000000000000000000000000000001086 123.0
YHH3_k127_1153267_0 COG1194 A G-specific DNA glycosylase K03575 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 407.0
YHH3_k127_1153267_1 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000503 269.0
YHH3_k127_1153267_2 PFAM AsmA family protein K07289 - - 0.00000000000000000000000000000000000000000000000000000000000000009001 231.0
YHH3_k127_1153267_3 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000006479 199.0
YHH3_k127_1153267_4 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000000002696 142.0
YHH3_k127_11536525_0 PFAM Aminotransferase class-III K00819 - 2.6.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007267 588.0
YHH3_k127_11536525_1 pfam abc K11962 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000453 385.0
YHH3_k127_11536525_2 ABC transporter, ATP-binding protein K11963 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 342.0
YHH3_k127_11536525_3 Arginase family K01476 - 3.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005046 293.0
YHH3_k127_11536525_4 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002668 258.0
YHH3_k127_11536525_5 Branched-chain amino acid transport system / permease component K01998,K11961 - - 0.000000000000000000000000000000000000000000000000000000000000000000001325 238.0
YHH3_k127_11536525_6 X-Pro dipeptidyl-peptidase (S15 family) K07018 - - 0.000000000000000000000000000000000000000000000000000000000000000000242 237.0
YHH3_k127_11536525_7 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain - - - 0.000000000000000000000000000000000001048 143.0
YHH3_k127_11536525_8 Protein involved in meta-pathway of phenol degradation - - - 0.0000000000000000000000003578 113.0
YHH3_k127_11536525_9 Protein of unknown function (DUF3135) - - - 0.00000000000000000000005974 103.0
YHH3_k127_11563298_0 type II secretion system protein E K02454,K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005114 467.0
YHH3_k127_11563298_1 probably involved in intracellular septation K06190 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005519 257.0
YHH3_k127_11563298_2 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000003489 182.0
YHH3_k127_11563298_3 YCII-related domain K09780 - - 0.0000000000000000000000000000000000000006756 149.0
YHH3_k127_11563298_4 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.000000000000000000000000000000004927 138.0
YHH3_k127_11563298_5 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000001553 104.0
YHH3_k127_11563298_6 response regulator receiver - - - 0.00000003467 60.0
YHH3_k127_11563298_7 deoxyhypusine monooxygenase activity - - - 0.00009981 49.0
YHH3_k127_11613828_0 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 430.0
YHH3_k127_11613828_1 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 411.0
YHH3_k127_11613828_2 thiamine transport K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 407.0
YHH3_k127_11613828_3 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K03184,K03185,K18800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004926 385.0
YHH3_k127_11613828_4 iron ion homeostasis K02012 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004505 273.0
YHH3_k127_1163769_0 Transketolase central region - - - 0.0 1028.0
YHH3_k127_1163769_1 Type III effector Hrp-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 557.0
YHH3_k127_1163769_2 membrane K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 413.0
YHH3_k127_1163769_3 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005856 343.0
YHH3_k127_1163769_4 Transcriptional regulator K13641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009807 305.0
YHH3_k127_1163769_5 FAD linked oxidase K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002049 271.0
YHH3_k127_1163769_6 Belongs to the peptidase S11 family K01286,K07258 GO:0003674,GO:0003824,GO:0004175,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000007393 269.0
YHH3_k127_1163769_7 Phosphoesterase K07095 - - 0.0000000000000000000000000000000000001366 146.0
YHH3_k127_11698833_0 VIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 309.0
YHH3_k127_11698833_1 Protein of unknown function (DUF2288) - - - 0.00000000000000000000000004276 110.0
YHH3_k127_11698833_2 FlhB HrpN YscU SpaS Family K04061 - - 0.0000000000000000000003424 104.0
YHH3_k127_11698833_3 Flagellar hook-length control protein FliK - - - 0.0000000000003653 74.0
YHH3_k127_11714774_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106 491.0
YHH3_k127_11714774_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004287 387.0
YHH3_k127_11714774_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005315 388.0
YHH3_k127_1173295_0 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 497.0
YHH3_k127_1173295_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 311.0
YHH3_k127_1173295_2 Sulfatase - - - 0.000000000000000000000006717 119.0
YHH3_k127_1173687_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 616.0
YHH3_k127_1173687_1 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 492.0
YHH3_k127_1173687_2 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000003334 271.0
YHH3_k127_1173687_3 system, fructose subfamily IIA component K02821 - 2.7.1.194 0.0000000000000000000000000000000000000000001817 161.0
YHH3_k127_1173687_4 Phosphotransferase System K11189 - - 0.00000000000000000000000000002205 119.0
YHH3_k127_11737620_0 Tetratricopeptide repeat - - - 5.686e-213 695.0
YHH3_k127_11737620_1 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 430.0
YHH3_k127_11737620_2 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00381,K00392 - 1.8.1.2,1.8.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 358.0
YHH3_k127_11737620_3 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007656 263.0
YHH3_k127_11737620_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000005137 227.0
YHH3_k127_11737620_5 biopolymer transport protein - - - 0.000000000000000000000000000000000001085 144.0
YHH3_k127_11737620_6 TPR repeat - - - 0.0000000000000000000000000000000055 136.0
YHH3_k127_11737620_7 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000004075 131.0
YHH3_k127_11737620_8 - - - - 0.000000000000000000000000006016 118.0
YHH3_k127_11737620_9 - - - - 0.000000000001617 70.0
YHH3_k127_11783282_0 TIGRFAM ATP-dependent helicase HrpA K03578 - 3.6.4.13 0.0 1083.0
YHH3_k127_11783282_1 Glycosyl transferase family group 2 - - - 3.976e-307 965.0
YHH3_k127_11783282_10 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 GO:0003674,GO:0003824,GO:0004112,GO:0004114,GO:0004115,GO:0005488,GO:0005506,GO:0008081,GO:0008150,GO:0008198,GO:0009987,GO:0016043,GO:0016787,GO:0016788,GO:0042545,GO:0042578,GO:0043167,GO:0043169,GO:0045229,GO:0046872,GO:0046914,GO:0071554,GO:0071555,GO:0071840 3.1.4.53 0.00000000000000000000000000000000000000000000000000000000000000007911 232.0
YHH3_k127_11783282_11 long-chain fatty acid transporting porin activity K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000629 232.0
YHH3_k127_11783282_12 organic phosphonate transport K02044 - - 0.000000000000000000000000000000000000000000000000000000000000006341 231.0
YHH3_k127_11783282_13 PFAM Peptidase M22, glycoprotease K14742 - - 0.00000000000000000000000000000000000000000000000000000000284 207.0
YHH3_k127_11783282_14 ErfK YbiS YcfS YnhG family protein - - - 0.0000000000000000000000000000000000000000000000000000001197 200.0
YHH3_k127_11783282_15 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000002735 189.0
YHH3_k127_11783282_16 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000001626 178.0
YHH3_k127_11783282_17 - - - - 0.000000000000000000000000000000000000000002063 174.0
YHH3_k127_11783282_18 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000002285 141.0
YHH3_k127_11783282_19 Belongs to the bacterial histone-like protein family - - - 0.000000000000000000000000000000000002908 141.0
YHH3_k127_11783282_2 Domain of unknown function DUF21 K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 525.0
YHH3_k127_11783282_20 PFAM Pentapeptide - - - 0.00000000000000000000000000002178 127.0
YHH3_k127_11783282_21 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000000001315 104.0
YHH3_k127_11783282_22 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.0000000002651 66.0
YHH3_k127_11783282_24 COG0790 FOG TPR repeat, SEL1 subfamily - - - 0.00000003648 61.0
YHH3_k127_11783282_26 Lipoprotein K06078 - - 0.000005305 53.0
YHH3_k127_11783282_27 PFAM Type IV pilus assembly PilZ - - - 0.00001315 51.0
YHH3_k127_11783282_28 Relaxase mobilization nuclease family protein - - - 0.0001097 54.0
YHH3_k127_11783282_3 histidine kinase HAMP region domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 421.0
YHH3_k127_11783282_4 L,D-transpeptidase catalytic domain K16291 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005167 345.0
YHH3_k127_11783282_5 COG0616 Periplasmic serine proteases (ClpP class) K04774 GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0016020,GO:0019538,GO:0043170,GO:0044238,GO:0044464,GO:0071704,GO:0071944,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 336.0
YHH3_k127_11783282_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007373 297.0
YHH3_k127_11783282_7 PFAM Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002565 286.0
YHH3_k127_11783282_8 pdz dhr glgf - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002258 288.0
YHH3_k127_11783282_9 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004539 278.0
YHH3_k127_11787262_0 COG0138 AICAR transformylase IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) K00602 GO:0003674,GO:0003824,GO:0004643,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.3,3.5.4.10 1.033e-252 788.0
YHH3_k127_11787262_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 485.0
YHH3_k127_11787262_2 Protein of unknown function (DUF3426) - - - 0.000000000000000000000000000004923 127.0
YHH3_k127_11787262_3 Belongs to the transcriptional regulatory Fis family K03557 - - 0.000000000000000000004142 96.0
YHH3_k127_11821678_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 1.335e-198 627.0
YHH3_k127_11821678_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 602.0
YHH3_k127_11821678_10 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0018130,GO:0019438,GO:0031668,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071897,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.000000000000009866 75.0
YHH3_k127_11821678_11 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000003999 71.0
YHH3_k127_11821678_2 PFAM Transglutaminase-like superfamily K22452 - 2.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 586.0
YHH3_k127_11821678_3 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 GO:0000166,GO:0001510,GO:0001882,GO:0001883,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006457,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009268,GO:0009451,GO:0009628,GO:0009636,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0030488,GO:0030955,GO:0031420,GO:0032259,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0042221,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0061077,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 462.0
YHH3_k127_11821678_4 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 425.0
YHH3_k127_11821678_5 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003822 397.0
YHH3_k127_11821678_6 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002657 261.0
YHH3_k127_11821678_7 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000006225 227.0
YHH3_k127_11821678_8 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000004622 109.0
YHH3_k127_11821678_9 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000000000355 91.0
YHH3_k127_11872597_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.736e-280 872.0
YHH3_k127_11872597_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 GO:0000270,GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0003977,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006629,GO:0006725,GO:0006793,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009225,GO:0009226,GO:0009252,GO:0009273,GO:0009987,GO:0016051,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0018130,GO:0019134,GO:0019438,GO:0030203,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0042546,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0046872,GO:0055086,GO:0070569,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903509 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000894 524.0
YHH3_k127_11872597_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006107 410.0
YHH3_k127_11872597_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000000000000000000000000005756 186.0
YHH3_k127_11882644_0 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 1.52e-205 656.0
YHH3_k127_11882644_1 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005741 548.0
YHH3_k127_11882644_10 COG1145 Ferredoxin - - - 0.00000000000000000000000000000000000000005329 154.0
YHH3_k127_11882644_11 HDOD domain - - - 0.0000000000000000000000000000000000000002576 160.0
YHH3_k127_11882644_2 PFAM Peptidase M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 448.0
YHH3_k127_11882644_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008142 422.0
YHH3_k127_11882644_4 cell division ATP-binding protein FtsE K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 288.0
YHH3_k127_11882644_5 PFAM MCP methyltransferase CheR-type K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000005726 266.0
YHH3_k127_11882644_6 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000002206 210.0
YHH3_k127_11882644_7 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052913,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.171 0.0000000000000000000000000000000000000000000000000000000007445 207.0
YHH3_k127_11882644_8 Cytochrome C and Quinol oxidase polypeptide I - - - 0.00000000000000000000000000000000000000000000000000003047 193.0
YHH3_k127_1191003_0 TIGRFAM Oxaloacetate decarboxylase, alpha subunit K01960 - 6.4.1.1 9.179e-292 905.0
YHH3_k127_1191003_1 PFAM peptidase S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004058 389.0
YHH3_k127_1191003_2 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 312.0
YHH3_k127_1191003_3 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006245 302.0
YHH3_k127_1191003_4 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003838 290.0
YHH3_k127_1191003_5 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009397 244.0
YHH3_k127_1191003_6 subfamily IA, variant 1 K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000005249 224.0
YHH3_k127_1191003_7 Responsible for synthesis of pseudouridine from uracil K06179 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.24 0.0000000000000000000000000000000000009906 143.0
YHH3_k127_11914463_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 497.0
YHH3_k127_11914463_1 Biotin and Thiamin Synthesis associated domain K01012,K16180 - 2.8.1.6,5.4.99.58 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 315.0
YHH3_k127_11914463_2 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 310.0
YHH3_k127_11914463_3 AAA domain - - - 0.000000000000000000000000000000000000000000000000000002768 199.0
YHH3_k127_11914463_4 Competence protein - - - 0.00000000000000000000000000000000000000000000000000001954 196.0
YHH3_k127_11914463_5 The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters K02170 - 3.1.1.85 0.000000000000000000000000000000000000000000000000007738 193.0
YHH3_k127_119218_0 ABC-type multidrug transport system ATPase and permease - - - 1.719e-206 664.0
YHH3_k127_119218_1 phosphate ion binding K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006722 293.0
YHH3_k127_119218_2 Endonuclease Exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000002217 219.0
YHH3_k127_119218_3 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.00000000000000000000000000000000000000000000000007729 190.0
YHH3_k127_119218_4 PFAM TadE family protein - - - 0.000000000000000000000000000000000000004285 164.0
YHH3_k127_119218_5 - - - - 0.000000000000000000005938 102.0
YHH3_k127_119218_6 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.000000000000000003755 85.0
YHH3_k127_119218_7 - - - - 0.000000000000000006309 88.0
YHH3_k127_119218_8 - - - - 0.0004539 51.0
YHH3_k127_11963962_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 464.0
YHH3_k127_11963962_1 Fis Family K02584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 417.0
YHH3_k127_11963962_2 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 342.0
YHH3_k127_11963962_3 FecR protein - - - 0.000000000000000000000000000000000475 152.0
YHH3_k127_11963962_4 transcription factor binding K02584,K07713 - - 0.000000000000000000000000001917 119.0
YHH3_k127_11963962_5 Tetratricopeptide repeat - - - 0.00000000000000000001838 105.0
YHH3_k127_12016167_0 Methyl-transferase K06983 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 398.0
YHH3_k127_12016167_1 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 325.0
YHH3_k127_12016167_10 Type II transport protein GspH K08084,K08085 - - 0.00000000000003637 79.0
YHH3_k127_12016167_11 SPW repeat - - - 0.0000000001861 66.0
YHH3_k127_12016167_12 COG4967 Tfp pilus assembly protein PilV K02671 - - 0.0000000007846 66.0
YHH3_k127_12016167_13 PilX N-terminal - - - 0.0002588 50.0
YHH3_k127_12016167_2 Histidine kinase K07646 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009697 335.0
YHH3_k127_12016167_3 response regulator K07667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005615 276.0
YHH3_k127_12016167_4 PFAM Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000000000249 230.0
YHH3_k127_12016167_5 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000000000002517 209.0
YHH3_k127_12016167_6 Isochorismatase family K08281 - 3.5.1.19 0.00000000000000000000000000001484 129.0
YHH3_k127_12016167_7 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 0.00000000000000000000000001244 121.0
YHH3_k127_12016167_8 Type IV Pilus-assembly protein W K02672 - - 0.00000000000000004982 93.0
YHH3_k127_12016167_9 Methyltransferase domain - - - 0.0000000000000001068 90.0
YHH3_k127_12026393_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1254.0
YHH3_k127_12026393_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006875 433.0
YHH3_k127_12026393_2 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003827 389.0
YHH3_k127_12033842_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1026.0
YHH3_k127_12033842_1 Belongs to the GPI family K01810 GO:0003674,GO:0003824,GO:0004347,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033554,GO:0034404,GO:0034599,GO:0034641,GO:0034654,GO:0034655,GO:0042221,GO:0042802,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0055086,GO:0070887,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.3.1.9 1.085e-276 860.0
YHH3_k127_12033842_10 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 362.0
YHH3_k127_12033842_11 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009104 325.0
YHH3_k127_12033842_12 Glutamine cyclotransferase K00683 - 2.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000009379 262.0
YHH3_k127_12033842_13 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000002072 244.0
YHH3_k127_12033842_14 membrane protein, required for colicin V production K03558 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009403,GO:0009404,GO:0009987,GO:0016020,GO:0019748,GO:0044237,GO:0044249,GO:0044464,GO:0044550,GO:0071944 - 0.0000000000000000000000000000000000001336 147.0
YHH3_k127_12033842_15 DsrE/DsrF-like family K09004 - - 0.0000000000000000000000000000927 128.0
YHH3_k127_12033842_16 Sporulation related domain K03749 - - 0.0000000000000000000004705 105.0
YHH3_k127_12033842_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 3.382e-240 751.0
YHH3_k127_12033842_3 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 4.018e-219 684.0
YHH3_k127_12033842_4 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 1.836e-218 688.0
YHH3_k127_12033842_5 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005168 606.0
YHH3_k127_12033842_6 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003086 519.0
YHH3_k127_12033842_7 6-phosphogluconate dehydrogenase K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008365 490.0
YHH3_k127_12033842_8 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008623 436.0
YHH3_k127_12033842_9 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006393 389.0
YHH3_k127_12092467_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1225.0
YHH3_k127_12092467_1 DNA polymerase III subunit delta K02340 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000003021 268.0
YHH3_k127_12092467_2 Zinc-ribbon containing domain - - - 0.0000000000000000000000000000000000000000156 159.0
YHH3_k127_12092467_3 Bacterial extracellular solute-binding protein K02048 - - 0.00000000000000000000000000000000006815 138.0
YHH3_k127_12092467_4 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.0000000533 61.0
YHH3_k127_12170487_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 4.119e-250 779.0
YHH3_k127_12170487_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 468.0
YHH3_k127_12170487_2 Pfam:HipA_N K07154 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 436.0
YHH3_k127_12170487_3 PFAM Sulfotransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 295.0
YHH3_k127_12170487_4 Glutathione S-transferase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000002924 185.0
YHH3_k127_12170487_5 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000059 104.0
YHH3_k127_12182162_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 7.434e-197 619.0
YHH3_k127_12182162_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003355 283.0
YHH3_k127_12190488_0 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004101 536.0
YHH3_k127_12190488_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004806 523.0
YHH3_k127_12190488_2 PFAM Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003788 411.0
YHH3_k127_12190488_3 PFAM Prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 332.0
YHH3_k127_12190488_4 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000001707 213.0
YHH3_k127_12226752_0 Protein of unknown function, DUF255 K06888 - - 2.735e-237 753.0
YHH3_k127_12226752_1 PFAM ABC transporter related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 350.0
YHH3_k127_12226752_2 PFAM cobalamin synthesis protein P47K - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008285 319.0
YHH3_k127_12226752_3 Putative Fe-S cluster - - - 0.000000000000000000000000000000000000000000000000001432 192.0
YHH3_k127_12226752_4 DSBA-like thioredoxin domain K21990 - - 0.00000000000000000000000000004452 127.0
YHH3_k127_12226752_5 cytochrome - - - 0.00000000000000003176 85.0
YHH3_k127_12251859_0 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 591.0
YHH3_k127_12251859_1 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 584.0
YHH3_k127_12251859_2 PFAM sodium hydrogen exchanger K03316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 350.0
YHH3_k127_12251859_3 hydrolase, TatD family K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009395 323.0
YHH3_k127_12251859_4 UBA THIF-type NAD FAD binding K22132 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 308.0
YHH3_k127_12336596_0 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006827 582.0
YHH3_k127_12336596_1 4-hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007261 535.0
YHH3_k127_12336596_10 carboxylase K01969 - 6.4.1.4 0.000000000000000000000000000000000000009999 147.0
YHH3_k127_12336596_11 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627 - 2.3.1.12 0.00000000000000000000000000009116 117.0
YHH3_k127_12336596_2 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase K00162,K21417 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 528.0
YHH3_k127_12336596_3 Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA K00253 - 1.3.8.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 485.0
YHH3_k127_12336596_4 1-deoxy-D-xylulose-5-phosphate synthase K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 467.0
YHH3_k127_12336596_5 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 464.0
YHH3_k127_12336596_6 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007696 447.0
YHH3_k127_12336596_7 Fumarylacetoacetate (FAA) hydrolase family K16171 - 3.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007794 439.0
YHH3_k127_12336596_8 Maleylacetoacetate isomerase K01800,K01801 - 5.2.1.2,5.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000006991 252.0
YHH3_k127_12336596_9 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000004365 214.0
YHH3_k127_12371392_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1386.0
YHH3_k127_12371392_1 SpoVR family K06415 GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 2.55e-252 786.0
YHH3_k127_12371392_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 4.682e-225 704.0
YHH3_k127_12371392_3 Belongs to the UPF0229 family K09786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000439 543.0
YHH3_k127_12371392_4 PFAM ATPase associated with various cellular activities K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 456.0
YHH3_k127_12371392_5 DnaJ-class molecular chaperone K05516 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004094 396.0
YHH3_k127_12371392_6 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005508 316.0
YHH3_k127_12371392_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000001163 170.0
YHH3_k127_12371392_8 PrkA AAA domain K07180 GO:0003674,GO:0003824,GO:0004672,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006995,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036211,GO:0042594,GO:0043170,GO:0043412,GO:0043562,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0140096,GO:1901564 - 0.000000000000000000000000000000000000000003708 155.0
YHH3_k127_12385877_0 PFAM Binding-protein-dependent transport K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 426.0
YHH3_k127_12385877_1 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007758 411.0
YHH3_k127_12385877_10 DsrE/DsrF-like family - - - 0.00000000000000000000000000000000000000004295 156.0
YHH3_k127_12385877_12 Lactonase, 7-bladed beta-propeller - - - 0.0007747 43.0
YHH3_k127_12385877_2 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K00772,K19696 - 2.4.2.28,2.4.2.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 347.0
YHH3_k127_12385877_3 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 349.0
YHH3_k127_12385877_4 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004017 281.0
YHH3_k127_12385877_5 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001541 281.0
YHH3_k127_12385877_6 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000001446 231.0
YHH3_k127_12385877_7 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001483 233.0
YHH3_k127_12385877_8 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000006604 220.0
YHH3_k127_12385877_9 Psort location Cytoplasmic, score 9.97 K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000009084 204.0
YHH3_k127_12401311_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 576.0
YHH3_k127_12401311_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002128 278.0
YHH3_k127_12401311_2 Involved in the processing of the 5'end of 16S rRNA K08301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004108 251.0
YHH3_k127_12401311_3 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000005604 220.0
YHH3_k127_12401311_4 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000001226 211.0
YHH3_k127_12401311_5 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000009051 187.0
YHH3_k127_12401311_6 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000009994 132.0
YHH3_k127_12401311_7 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00003087 48.0
YHH3_k127_12407078_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0071972,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 612.0
YHH3_k127_12407078_1 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 300.0
YHH3_k127_12407078_2 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 - - 0.000000000000000000000000000000000000000000000000002124 186.0
YHH3_k127_12407078_3 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.000000000006002 65.0
YHH3_k127_1242670_0 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006614 517.0
YHH3_k127_1242670_1 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007379 379.0
YHH3_k127_1242670_2 Methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000006524 232.0
YHH3_k127_1242670_3 protein affecting Mg2 Co2 transport K06195 - - 0.0000000000000000000000000000000000000000000000000005499 186.0
YHH3_k127_1242670_4 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.00000003128 55.0
YHH3_k127_12436198_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 9.911e-199 625.0
YHH3_k127_12436198_1 Belongs to the peptidase S1C family K04772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 506.0
YHH3_k127_12436198_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000000001235 190.0
YHH3_k127_12442085_0 PFAM Sel1 domain protein repeat-containing protein - - - 0.000000000000000000000000000000000000000000000008702 184.0
YHH3_k127_12442085_1 Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins. K15383 - - 0.000000000000000000000198 100.0
YHH3_k127_12442085_2 response regulator - - - 0.00000000000000000004139 96.0
YHH3_k127_12442085_3 - - - - 0.00000000000000000121 91.0
YHH3_k127_12442085_4 ATPase (AAA) - - - 0.00002221 51.0
YHH3_k127_12488259_0 PFAM ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007229 358.0
YHH3_k127_12488259_1 pilus assembly protein, PilZ - - - 0.000000000000000000000000000000000002091 142.0
YHH3_k127_12488259_2 - - - - 0.000000000000000000000001326 106.0
YHH3_k127_12528032_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 2.149e-197 625.0
YHH3_k127_12528032_1 Surface antigen variable number K07278 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101 477.0
YHH3_k127_12528032_2 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009388 357.0
YHH3_k127_12528032_3 glycosyl hydrolase, BNR repeat-containing protein - - - 0.000000000000005852 81.0
YHH3_k127_12528032_4 Psort location OuterMembrane, score 9.49 K09800 - - 0.0001465 48.0
YHH3_k127_12558145_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 7.69e-249 775.0
YHH3_k127_12558145_1 pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 451.0
YHH3_k127_12558145_10 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0006472 48.0
YHH3_k127_12558145_2 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002071 277.0
YHH3_k127_12558145_3 EAL domain K21024 - 3.1.4.52 0.000000000000000000000000000000000000000000000000000000000000000000000002667 259.0
YHH3_k127_12558145_4 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000002655 244.0
YHH3_k127_12558145_5 YaeQ - - - 0.00000000000000000000000000000000000000000000000000000000000000000002362 239.0
YHH3_k127_12558145_6 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000008255 203.0
YHH3_k127_12558145_7 TIGRFAM phenazine biosynthesis K06998 - 5.3.3.17 0.0000000000000000000000000006212 120.0
YHH3_k127_12558145_8 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.00000000000000000000000001264 114.0
YHH3_k127_12558145_9 isomerase activity K06998 - 5.3.3.17 0.0005997 43.0
YHH3_k127_12602667_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009538 434.0
YHH3_k127_12602667_1 calcium, potassium:sodium antiporter activity K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007289 347.0
YHH3_k127_12614117_0 Type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 411.0
YHH3_k127_12614117_1 PFAM Sporulation domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005162 352.0
YHH3_k127_12614117_2 long-chain fatty acid transport protein K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 303.0
YHH3_k127_12614117_3 transporter component K07112 - - 0.0006651 42.0
YHH3_k127_12617603_0 Putative porin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004164 427.0
YHH3_k127_12617603_1 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008764 333.0
YHH3_k127_12617603_2 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000000000000000000000000004583 135.0
YHH3_k127_12617603_3 nuclear chromosome segregation - - - 0.000000000000000006272 92.0
YHH3_k127_12617603_4 Acetyltransferase (GNAT) domain - - - 0.0000008006 61.0
YHH3_k127_12696111_0 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 313.0
YHH3_k127_12696111_1 peptidyl-tyrosine sulfation - - - 0.0000002406 59.0
YHH3_k127_12789457_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.268e-246 770.0
YHH3_k127_12789457_1 Alpha amylase, catalytic domain K00700,K01236 - 2.4.1.18,3.2.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007928 332.0
YHH3_k127_12789457_2 surface antigen variable number repeat protein K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002786 282.0
YHH3_k127_12789457_3 long-chain fatty acid transport protein - - - 0.00000000000000000000003818 109.0
YHH3_k127_12789457_4 GDSL-like Lipase/Acylhydrolase family - - - 0.00000000000000000004189 106.0
YHH3_k127_12877559_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F K01414 - 3.4.24.70 1.875e-312 969.0
YHH3_k127_12877559_1 Acetamidase/Formamidase family K01455 - 3.5.1.49 6.476e-222 692.0
YHH3_k127_12877559_10 SurA N-terminal domain - - - 0.00000000000000000000000000000000000000001186 165.0
YHH3_k127_12877559_11 Putative regulatory protein - - - 0.0000000000000000000000000000001463 128.0
YHH3_k127_12877559_12 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.00000000000000000000000000000626 126.0
YHH3_k127_12877559_13 PFAM MotA TolQ ExbB proton channel K03561 - - 0.000000000000009754 76.0
YHH3_k127_12877559_14 sequence-specific DNA binding - - - 0.0000000000004363 73.0
YHH3_k127_12877559_15 ABC transporter - - - 0.00000001793 59.0
YHH3_k127_12877559_16 - - - - 0.00000001849 65.0
YHH3_k127_12877559_2 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K11959 - - 2.985e-214 674.0
YHH3_k127_12877559_3 Belongs to the binding-protein-dependent transport system permease family K11961 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 570.0
YHH3_k127_12877559_4 urea ABC transporter, permease protein UrtB K11960 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 450.0
YHH3_k127_12877559_5 TIGRFAM urea ABC transporter, ATP-binding protein UrtD K11962 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000985 405.0
YHH3_k127_12877559_6 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 395.0
YHH3_k127_12877559_7 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K11963 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 357.0
YHH3_k127_12877559_8 PFAM Endonuclease Exonuclease phosphatase K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 340.0
YHH3_k127_12877559_9 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 295.0
YHH3_k127_129323_0 serine threonine protein kinase K08282 - 2.7.11.1 0.0000000006842 72.0
YHH3_k127_1299808_0 Threonyl and Alanyl tRNA synthetase second additional domain K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0 1024.0
YHH3_k127_1299808_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009314,GO:0009380,GO:0009628,GO:0032991,GO:0042802,GO:0044424,GO:0044464,GO:0050896,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 2.362e-316 980.0
YHH3_k127_1299808_10 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.00000000000000000001667 92.0
YHH3_k127_1299808_11 Domain of unknown function (DUF4156) - - - 0.000000000000000002706 91.0
YHH3_k127_1299808_2 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 1.085e-264 837.0
YHH3_k127_1299808_3 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004267 566.0
YHH3_k127_1299808_4 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008674 499.0
YHH3_k127_1299808_5 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001159 257.0
YHH3_k127_1299808_6 Predicted membrane protein (DUF2238) K08984 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000004844 223.0
YHH3_k127_1299808_7 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000000002083 192.0
YHH3_k127_1299808_8 PFAM regulatory protein, MerR - - - 0.000000000000000000000000000000000000000000000000003434 183.0
YHH3_k127_1299808_9 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000006782 155.0
YHH3_k127_134085_0 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 6.775e-212 668.0
YHH3_k127_134085_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082 515.0
YHH3_k127_134085_2 PFAM Fructosamine kinase - GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0044237 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 336.0
YHH3_k127_134085_3 F plasmid transfer operon, TraF, protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 297.0
YHH3_k127_134085_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000000000000001382 221.0
YHH3_k127_134085_5 PFAM cytochrome c, class I K08738 - - 0.0000000000000000000000000000002466 125.0
YHH3_k127_134085_6 Protein of unknown function (DUF2782) - - - 0.000000000000000000003518 93.0
YHH3_k127_134085_7 transfer protein - - - 0.000000004017 68.0
YHH3_k127_134085_8 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.000000005973 57.0
YHH3_k127_1432132_0 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 8.483e-207 650.0
YHH3_k127_1432132_1 Protein of unknown function (DUF3570) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 437.0
YHH3_k127_1432132_2 SMART AAA ATPase K02450 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006146 419.0
YHH3_k127_1432132_3 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 316.0
YHH3_k127_1432132_4 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006692 305.0
YHH3_k127_1432132_5 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000003414 214.0
YHH3_k127_1432132_6 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000001595 180.0
YHH3_k127_1432132_7 Domain of unknown function (DUF4266) - - - 0.00000000000000000000000003259 111.0
YHH3_k127_1432132_8 Pfam:Methyltransf_26 - - - 0.000000000000000000003926 103.0
YHH3_k127_14497_0 PFAM ABC transporter K01990 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 477.0
YHH3_k127_14497_1 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004437 425.0
YHH3_k127_14497_2 PRMT5 arginine-N-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 323.0
YHH3_k127_14497_3 Spermine/spermidine synthase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003167 282.0
YHH3_k127_14497_4 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001526 289.0
YHH3_k127_14497_5 UPF0114 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000028 228.0
YHH3_k127_14497_6 relative of glutathione S-transferase, MAPEG superfamily K07136 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000002274 158.0
YHH3_k127_14497_7 LuxR family transcriptional regulator K20918 - - 0.00000000000000000002308 99.0
YHH3_k127_14497_8 gag-polyprotein putative aspartyl protease - - - 0.000000000000000001392 98.0
YHH3_k127_14497_9 cellular response to DNA damage stimulus - - - 0.000000000000006255 80.0
YHH3_k127_1454000_0 FAD linked - - - 0.0 1819.0
YHH3_k127_1454000_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 416.0
YHH3_k127_1454000_2 PFAM histone deacetylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 391.0
YHH3_k127_1454000_3 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004301 342.0
YHH3_k127_1454000_4 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000007233 229.0
YHH3_k127_1454000_5 Uncharacterised protein family (UPF0093) K08973 - - 0.0000000000000000000000000000000000000000000000000000000000001682 214.0
YHH3_k127_1454000_6 Membrane - - - 0.00000000000000000000000000000000000000000000004902 173.0
YHH3_k127_1454000_7 Protein of unknown function (DUF2905) - - - 0.0000000000000000000000006057 105.0
YHH3_k127_1454000_8 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000003942 101.0
YHH3_k127_1533709_0 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003244 333.0
YHH3_k127_1533709_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000002088 222.0
YHH3_k127_1533709_2 cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000004833 189.0
YHH3_k127_1533709_3 - - - - 0.0000000000000000000000000001502 120.0
YHH3_k127_1533709_4 Sigma-70, region 4 - - - 0.000000000000000000000006246 107.0
YHH3_k127_1533709_5 - - - - 0.00000000000000001356 92.0
YHH3_k127_1533709_6 - - - - 0.00000000000000006178 85.0
YHH3_k127_1596714_0 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049,K15578 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 398.0
YHH3_k127_1596714_1 isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009563 256.0
YHH3_k127_1596714_2 Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide K01725 - 4.2.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000009653 250.0
YHH3_k127_1596714_3 Glutaredoxin - - - 0.0002926 46.0
YHH3_k127_1598714_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 2.03e-322 1006.0
YHH3_k127_1598714_1 Belongs to the argininosuccinate synthase family. Type K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 2.699e-224 700.0
YHH3_k127_1598714_2 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 311.0
YHH3_k127_1598714_3 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000001354 217.0
YHH3_k127_1598714_4 Metal-sensitive transcriptional repressor K21600 - - 0.000000000000000000000000000005272 123.0
YHH3_k127_1598714_5 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000001838 109.0
YHH3_k127_1598714_6 Heavy metal-associated domain protein K07213 - - 0.000000000000000001476 87.0
YHH3_k127_1598714_7 COG2801 Transposase and inactivated derivatives - - - 0.000000000000004719 79.0
YHH3_k127_1623375_0 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000002098 187.0
YHH3_k127_1693510_0 Dynamin family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 567.0
YHH3_k127_1693510_1 PFAM Type II secretion system protein E K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004288 531.0
YHH3_k127_1693510_2 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003159 388.0
YHH3_k127_1693510_3 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 GO:0000287,GO:0003674,GO:0003824,GO:0004588,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 284.0
YHH3_k127_1693510_4 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000365 287.0
YHH3_k127_1693510_5 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001617 260.0
YHH3_k127_1693510_6 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002306 244.0
YHH3_k127_1693510_7 integral membrane protein K02221 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000006465 204.0
YHH3_k127_1693510_8 Pfam Transposase IS66 - - - 0.00000000000000000000007825 106.0
YHH3_k127_1693510_9 Belongs to the UPF0235 family K09131 - - 0.0000000000000000000005109 99.0
YHH3_k127_1707734_0 Putative RNA methylase family UPF0020 K07444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 361.0
YHH3_k127_1707734_1 Hpt domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009163 272.0
YHH3_k127_1707734_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000316 259.0
YHH3_k127_1707734_3 response regulator receiver - - - 0.00000000000000000000000000000009575 127.0
YHH3_k127_1707734_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000002571 120.0
YHH3_k127_1707734_5 ABC transporter substrate binding protein K01989 - - 0.00000000000001001 85.0
YHH3_k127_1707734_6 SlyX K03745 - - 0.00000000000001526 77.0
YHH3_k127_1707734_8 - - - - 0.00004046 47.0
YHH3_k127_1710506_0 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002827 504.0
YHH3_k127_1710506_1 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000002573 156.0
YHH3_k127_1710506_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000002846 128.0
YHH3_k127_1710506_3 protein heterodimerization activity - - - 0.00000000000001006 76.0
YHH3_k127_1710506_4 type II secretion system protein E K02652 - - 0.0000005074 56.0
YHH3_k127_1715787_0 Dehydrogenase E1 component K00164 - 1.2.4.2 2.638e-314 980.0
YHH3_k127_1715787_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000005767 238.0
YHH3_k127_1715787_2 Histidine kinase - - - 0.000000001512 72.0
YHH3_k127_1719409_0 PFAM ABC-1 domain protein K03688 - - 1.681e-199 636.0
YHH3_k127_1719409_1 Spermidine synthase K00797 - 2.5.1.16 0.0000000000000000000000000000000000000007626 159.0
YHH3_k127_1719409_2 - - - - 0.0000000000000000000006243 104.0
YHH3_k127_1724132_0 PFAM Aminotransferase class I and II K00835 - 2.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 554.0
YHH3_k127_1724132_1 Alkaline phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008437 542.0
YHH3_k127_1724132_2 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000003571 201.0
YHH3_k127_1724132_3 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.0000000000000000000000000000000002573 138.0
YHH3_k127_1724132_4 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000002061 144.0
YHH3_k127_1724132_5 polyribonucleotide nucleotidyltransferase - - - 0.000000000000000000000002197 108.0
YHH3_k127_1724132_6 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000005512 72.0
YHH3_k127_1741807_0 DNA RNA helicase - - - 5.222e-291 928.0
YHH3_k127_1741807_1 Belongs to the TPP enzyme family K01652 - 2.2.1.6 2.437e-270 839.0
YHH3_k127_1741807_2 Endonuclease Exonuclease Phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 293.0
YHH3_k127_1741807_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007816 265.0
YHH3_k127_1741807_4 - - - - 0.000000000000000000005705 95.0
YHH3_k127_1766801_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.028e-284 878.0
YHH3_k127_1766801_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 419.0
YHH3_k127_1766801_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 398.0
YHH3_k127_1766801_3 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 384.0
YHH3_k127_1766801_4 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 326.0
YHH3_k127_1766801_5 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000000000000000002594 197.0
YHH3_k127_1766801_6 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000000000000000000000000000000000003846 176.0
YHH3_k127_1766801_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000001163 170.0
YHH3_k127_1766801_8 ATP synthase I chain K02116 - - 0.000000000005334 71.0
YHH3_k127_1766801_9 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.00000004266 58.0
YHH3_k127_1790315_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 5.484e-265 818.0
YHH3_k127_1790315_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004229 291.0
YHH3_k127_181174_0 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 502.0
YHH3_k127_181174_1 COG1943 Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000000000000003794 175.0
YHH3_k127_181174_2 - - - - 0.00000000004592 71.0
YHH3_k127_1868323_0 mechanosensitive ion channel K05802 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 553.0
YHH3_k127_1868323_1 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000008063 236.0
YHH3_k127_1868323_2 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.000000000000000000000000000000000000000000000000000000001118 213.0
YHH3_k127_1868323_3 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K20978 - - 0.000000000000000002097 88.0
YHH3_k127_1926673_0 PFAM TrkA-N domain K03499 - - 7.171e-223 698.0
YHH3_k127_1926673_1 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 9.153e-213 670.0
YHH3_k127_1926673_2 Methionine synthase K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 2.644e-195 621.0
YHH3_k127_1926673_3 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000004513 253.0
YHH3_k127_1926673_4 response regulator receiver K13599 - - 0.00000000000000000000000000000000000000000000000000000000001606 210.0
YHH3_k127_1926673_5 Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000000000000000000004449 205.0
YHH3_k127_1926673_6 Tetratricopeptide repeat - - - 0.0000000000000000000000003048 109.0
YHH3_k127_1948325_0 PFAM aminotransferase, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008624 470.0
YHH3_k127_1948325_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006657 413.0
YHH3_k127_1948325_2 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002585 327.0
YHH3_k127_1948325_3 PFAM Cold-shock protein, DNA-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000001717 231.0
YHH3_k127_1948325_4 Fructose-1,6-bisphosphatase K01622 - 3.1.3.11,4.1.2.13 0.00000000000000000000000000000001569 130.0
YHH3_k127_1948325_5 High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway K06203 GO:0000096,GO:0000097,GO:0000103,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006520,GO:0006534,GO:0006790,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0008150,GO:0008152,GO:0008271,GO:0008272,GO:0008324,GO:0008509,GO:0008512,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009675,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015103,GO:0015116,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015296,GO:0015318,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0016053,GO:0019344,GO:0019752,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044425,GO:0044459,GO:0044464,GO:0046394,GO:0051179,GO:0051234,GO:0055085,GO:0071704,GO:0071944,GO:0072348,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901682,GO:1902358,GO:1902600 - 0.000000000007779 66.0
YHH3_k127_1976764_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 2.053e-225 714.0
YHH3_k127_1976764_1 glycosyl hydrolase, BNR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 430.0
YHH3_k127_1976764_2 Hydrogenase accessory protein HypB K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 304.0
YHH3_k127_1976764_3 Bacterial protein of unknown function (DUF924) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002244 248.0
YHH3_k127_1976764_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000008031 243.0
YHH3_k127_1976764_5 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.00000000000000000000000000004168 120.0
YHH3_k127_1976764_6 Protein of unknown function (DUF2914) - - - 0.000000000000000000000000002437 116.0
YHH3_k127_1987906_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 3.321e-223 700.0
YHH3_k127_1987906_1 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000641 179.0
YHH3_k127_1987906_2 Histidine kinase - - - 0.0000000000000000000000000002367 117.0
YHH3_k127_1987906_3 - - - - 0.000000000000005286 79.0
YHH3_k127_2066742_0 Polysulphide reductase, NrfD K00185 - - 1.925e-219 689.0
YHH3_k127_2066742_1 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 5.149e-213 684.0
YHH3_k127_2066742_10 NGG1p interacting factor 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 319.0
YHH3_k127_2066742_11 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006311 310.0
YHH3_k127_2066742_12 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 305.0
YHH3_k127_2066742_13 Pfam Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 291.0
YHH3_k127_2066742_14 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 GO:0000105,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000108 271.0
YHH3_k127_2066742_15 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.0000000000000000000000000000000000000000000000000000001081 197.0
YHH3_k127_2066742_16 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000125 196.0
YHH3_k127_2066742_17 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000002942 193.0
YHH3_k127_2066742_18 Cytochrome c - - - 0.000000000000000000000000000000000000000000002366 170.0
YHH3_k127_2066742_19 Copper resistance protein D - - - 0.000000000000000000000000000000000000000000003667 168.0
YHH3_k127_2066742_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.016e-209 675.0
YHH3_k127_2066742_20 phosphoribosyl-ATP pyrophosphohydrolase K01523 GO:0000105,GO:0003674,GO:0003824,GO:0004636,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.6.1.31 0.00000000000000000000000000000000000000000001953 163.0
YHH3_k127_2066742_21 Protein of unknown function (DUF3341) - - - 0.0000000000000000000000000000000000000000005575 162.0
YHH3_k127_2066742_22 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000000003822 81.0
YHH3_k127_2066742_23 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.00000000000001422 78.0
YHH3_k127_2066742_3 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 604.0
YHH3_k127_2066742_4 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 445.0
YHH3_k127_2066742_5 Belongs to the peptidase S1C family K04691,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009897,GO:0009986,GO:0009987,GO:0010033,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0033554,GO:0035966,GO:0035967,GO:0042221,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051716,GO:0051788,GO:0070011,GO:0070887,GO:0071218,GO:0071310,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004177 435.0
YHH3_k127_2066742_6 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 402.0
YHH3_k127_2066742_7 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009955 391.0
YHH3_k127_2066742_8 4 iron, 4 sulfur cluster binding K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 372.0
YHH3_k127_2066742_9 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 334.0
YHH3_k127_2149029_0 Putative diguanylate phosphodiesterase - - - 7.968e-231 734.0
YHH3_k127_2149029_1 histidine kinase HAMP region domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 633.0
YHH3_k127_2149029_2 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 535.0
YHH3_k127_2149029_3 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009284 312.0
YHH3_k127_2149029_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001364 264.0
YHH3_k127_2149029_5 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000000307 117.0
YHH3_k127_2199232_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 7.436e-221 698.0
YHH3_k127_2199232_1 Glutathione synthase ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 556.0
YHH3_k127_2199232_2 Peptidase_C39 like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 473.0
YHH3_k127_2199232_3 FAD-linked oxidase - - - 0.00001336 48.0
YHH3_k127_2213642_0 Asparagine synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 463.0
YHH3_k127_2213642_1 Glycosyl transferase family 2 K12984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009344 334.0
YHH3_k127_2213642_2 Glycosyltransferase family 9 (heptosyltransferase) K02841 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008157 288.0
YHH3_k127_2213642_3 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007043 272.0
YHH3_k127_2213642_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007846 251.0
YHH3_k127_2213642_5 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000001153 138.0
YHH3_k127_2245040_0 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 515.0
YHH3_k127_2245040_1 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 329.0
YHH3_k127_2245040_2 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 297.0
YHH3_k127_2245040_3 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.0000000000000000000000000000000000000000000000000000000000004175 216.0
YHH3_k127_2245040_4 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000008003 100.0
YHH3_k127_2250288_0 Helicase associated domain (HA2) Add an annotation K03579 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 357.0
YHH3_k127_2250288_1 TIGRFAM Diguanylate cyclase K13590 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005707 297.0
YHH3_k127_2250288_2 PFAM Outer membrane lipoprotein Slp K07285 - - 0.000000000000000000000000000000000000000008892 159.0
YHH3_k127_2250288_3 Zn-dependent protease with chaperone function - - - 0.00000000000000000000000002259 127.0
YHH3_k127_2250288_4 Membrane - - - 0.00006538 57.0
YHH3_k127_2266207_0 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000988 488.0
YHH3_k127_2266207_1 TIGRFAM Flagellar hook-associated protein, FlgK K02396 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001476 246.0
YHH3_k127_2266207_2 Flagellar rod assembly protein muramidase FlgJ K02395 - - 0.000000000000000000000000000000000000000000000000000000000000000009803 235.0
YHH3_k127_2266207_3 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.0000000000000000000000000000000005323 134.0
YHH3_k127_2276536_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 464.0
YHH3_k127_2276536_1 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005712 428.0
YHH3_k127_2276536_2 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 321.0
YHH3_k127_2276536_3 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000004253 145.0
YHH3_k127_2276536_4 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 - 0.0000000000000000000000000000000000003276 141.0
YHH3_k127_2288540_0 Sigma-54 interaction domain - - - 2.566e-198 630.0
YHH3_k127_2288540_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004026 434.0
YHH3_k127_2288540_2 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0008033,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009451,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016070,GO:0016740,GO:0016765,GO:0019222,GO:0031323,GO:0031326,GO:0032268,GO:0033554,GO:0034248,GO:0034470,GO:0034605,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043555,GO:0044237,GO:0044238,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051246,GO:0051716,GO:0052381,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1990497,GO:2000112,GO:2000765 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005338 338.0
YHH3_k127_2288540_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000163 235.0
YHH3_k127_2288540_4 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000000000000000001674 140.0
YHH3_k127_2302021_0 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.0000000000000000000000000000000000000000000000000000000000000000002193 231.0
YHH3_k127_2302021_1 nucleotide catabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000008129 228.0
YHH3_k127_2302021_2 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000001187 215.0
YHH3_k127_2302021_3 Transcriptional regulator K13643 - - 0.00000000000000000000000000000000009921 138.0
YHH3_k127_2302457_0 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006731 452.0
YHH3_k127_2302457_1 Domain of unknown function (DUF927) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 297.0
YHH3_k127_2302457_3 DNA excision - - - 0.0001226 49.0
YHH3_k127_2320425_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005699 365.0
YHH3_k127_2320425_1 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 314.0
YHH3_k127_2320425_2 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000287 263.0
YHH3_k127_2320425_3 PTS IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.00000000000000000000000000000000000000004775 157.0
YHH3_k127_2320425_4 Sigma 54 modulation protein K05808 - - 0.0000000000000000000000000000000009465 135.0
YHH3_k127_2324985_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 1.21e-236 743.0
YHH3_k127_2324985_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 357.0
YHH3_k127_2324985_2 Biotin-lipoyl like K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003847 251.0
YHH3_k127_2324985_3 Sterol-binding domain protein K03690 - - 0.00000000000000000000000000000000000000005423 160.0
YHH3_k127_2324985_4 membrane protein domain - - - 0.000000000000000000000000000000000001455 146.0
YHH3_k127_2324985_5 Protein of unknown function (DUF971) - - - 0.000000001974 59.0
YHH3_k127_2342556_0 glutamate--cysteine ligase K01919 - 6.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 596.0
YHH3_k127_2342556_1 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005787 443.0
YHH3_k127_2342556_2 - - - - 0.000000000005334 71.0
YHH3_k127_2342556_3 type IV pilus modification protein PilV K02671 - - 0.0000002051 59.0
YHH3_k127_2343716_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1103.0
YHH3_k127_2343716_1 Bacterial regulatory helix-turn-helix protein, lysR family K13634 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 434.0
YHH3_k127_2343716_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 340.0
YHH3_k127_2343716_3 LysM domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 329.0
YHH3_k127_2343716_4 PFAM DNA recombination-mediator protein A K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001075 291.0
YHH3_k127_2343716_5 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000002522 238.0
YHH3_k127_2343716_6 Belongs to the Smg family K03747 - - 0.0000000000000000000000000000000000000000000000000000000003291 208.0
YHH3_k127_2343716_7 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000009224 209.0
YHH3_k127_2343716_8 nitrite sulfite reductase hemoprotein beta-component ferrodoxin domain protein K00381,K00392 - 1.8.1.2,1.8.7.1 0.00000000000000000000000000000000000001122 150.0
YHH3_k127_2345174_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 436.0
YHH3_k127_2345174_1 Tyrosine recombinase XerD K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009964 371.0
YHH3_k127_2345174_10 SpoVT / AbrB like domain - - - 0.0002445 46.0
YHH3_k127_2345174_2 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004676 344.0
YHH3_k127_2345174_3 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000000000000005922 216.0
YHH3_k127_2345174_4 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000000000000000000002751 199.0
YHH3_k127_2345174_5 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000000000000000000002196 187.0
YHH3_k127_2345174_6 Protein of unknown function (DUF1698) - - - 0.000000000000000000000000000000000000000000003989 175.0
YHH3_k127_2345174_7 LPP20 lipoprotein - - - 0.00000000000000000000000000000000000000007899 157.0
YHH3_k127_2345174_8 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000003624 127.0
YHH3_k127_2345174_9 LPP20 lipoprotein - - - 0.000000535 60.0
YHH3_k127_2374949_0 associated with various cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 515.0
YHH3_k127_2374949_1 Putative metallopeptidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000614 445.0
YHH3_k127_2374949_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008896 256.0
YHH3_k127_2374949_3 TIGRFAM Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000002528 176.0
YHH3_k127_2392919_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 4.632e-219 685.0
YHH3_k127_2392919_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 355.0
YHH3_k127_2392919_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006464,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0042802,GO:0043021,GO:0043022,GO:0043170,GO:0043335,GO:0043412,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0050896,GO:0051083,GO:0061077,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 360.0
YHH3_k127_2392919_3 Belongs to the peptidase S8 family K14645 - - 0.0000000000000000000000000000009402 128.0
YHH3_k127_2392919_4 - - - - 0.0000001244 54.0
YHH3_k127_2411639_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 6.748e-266 844.0
YHH3_k127_2411639_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 435.0
YHH3_k127_2411639_10 - - - - 0.0000000000000001253 94.0
YHH3_k127_2411639_11 Lactonase, 7-bladed beta-propeller K07404 - 3.1.1.31 0.0000000000000003809 93.0
YHH3_k127_2411639_2 6-bladed beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 381.0
YHH3_k127_2411639_3 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000000000000000000000000000008675 237.0
YHH3_k127_2411639_4 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000002086 205.0
YHH3_k127_2411639_5 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000001511 165.0
YHH3_k127_2411639_6 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000001189 143.0
YHH3_k127_2411639_7 - - - - 0.000000000000000000000000000005028 137.0
YHH3_k127_2411639_8 metallopeptidase activity K07404 - 3.1.1.31 0.00000000000000000000000000005564 135.0
YHH3_k127_2411639_9 PFAM NHL repeat containing protein - - - 0.00000000000000000003027 103.0
YHH3_k127_2412992_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 601.0
YHH3_k127_2412992_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 505.0
YHH3_k127_2412992_2 Vitamin K epoxide reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000003579 234.0
YHH3_k127_2412992_3 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000000000000000000000000000000000001865 228.0
YHH3_k127_2412992_4 Methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000001145 192.0
YHH3_k127_2412992_5 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K01840 - 5.4.2.8 0.00000000000000000000000000000001312 129.0
YHH3_k127_2412992_6 protein conserved in bacteria K09920 - - 0.0000000000000000008374 91.0
YHH3_k127_2412992_7 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000001455 82.0
YHH3_k127_2417199_0 PFAM Cation K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005262 402.0
YHH3_k127_2417199_1 TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000001232 243.0
YHH3_k127_2417199_2 Histidine kinase - - - 0.000002807 51.0
YHH3_k127_2504022_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 4.303e-305 943.0
YHH3_k127_2504022_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.792e-235 741.0
YHH3_k127_2504022_10 PFAM Anti sigma-E protein RseA K03597 - - 0.00000000000004755 80.0
YHH3_k127_2504022_11 - K19168 - - 0.0000000001206 70.0
YHH3_k127_2504022_2 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 4.505e-221 691.0
YHH3_k127_2504022_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 556.0
YHH3_k127_2504022_4 COG0479 Succinate dehydrogenase fumarate reductase, Fe-S protein subunit K00240 GO:0000104,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0022904,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 383.0
YHH3_k127_2504022_5 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 346.0
YHH3_k127_2504022_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008205 268.0
YHH3_k127_2504022_7 MucB/RseB C-terminal domain K03598 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0044464,GO:0045152 - 0.0000000000000000000000000000000000000000000000000001158 198.0
YHH3_k127_2504022_8 COG3086 Positive regulator of sigma E activity K03803 GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.00000000000000000000007509 104.0
YHH3_k127_2504022_9 Flavinator of succinate dehydrogenase K09159 - - 0.000000000000000009754 89.0
YHH3_k127_2526725_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1400.0
YHH3_k127_2526725_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 4.602e-257 800.0
YHH3_k127_2526725_2 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 2.371e-215 680.0
YHH3_k127_2526725_3 type II secretion system protein E K02454,K02652 - - 4.837e-200 650.0
YHH3_k127_2526725_4 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 618.0
YHH3_k127_2526725_5 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007868 331.0
YHH3_k127_2526725_6 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.00000000000000000000000000000000000707 141.0
YHH3_k127_2526725_7 Protein of unknown function (DUF2914) - - - 0.000000000000000000000002026 109.0
YHH3_k127_2526725_8 PFAM peptidase M48 Ste24p - - - 0.0001157 47.0
YHH3_k127_2533337_0 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005877 272.0
YHH3_k127_2533337_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides - GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0012505,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0031410,GO:0031982,GO:0031984,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0097708,GO:0098791,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000006404 160.0
YHH3_k127_2533337_2 - - - - 0.000000000000000000000001173 107.0
YHH3_k127_2533337_3 Domain of unknown function (DUF4336) - - - 0.000000000000000000000009157 104.0
YHH3_k127_2536744_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 2.465e-195 616.0
YHH3_k127_2536744_1 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.0000000000000000000000003277 105.0
YHH3_k127_2536744_2 von willebrand factor, type A K07114 - - 0.000000005228 63.0
YHH3_k127_2536744_3 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0000003203 51.0
YHH3_k127_2578652_0 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008861 479.0
YHH3_k127_2578652_1 SMART protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000003605 198.0
YHH3_k127_2578652_2 Histidine kinase - - - 0.000000000000000000000000000105 134.0
YHH3_k127_2579200_0 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000001553 196.0
YHH3_k127_2579200_1 PIN domain - - - 0.0000000000000000000000000000000000000000000000002022 179.0
YHH3_k127_2579200_10 - - - - 0.000000008055 63.0
YHH3_k127_2579200_11 - - - - 0.00001102 49.0
YHH3_k127_2579200_2 Plasmid maintenance system killer K07334 - - 0.000000000000000000000000000000000000001857 149.0
YHH3_k127_2579200_3 Helix-turn-helix XRE-family like proteins K21498 - - 0.0000000000000000000000000000000000004154 141.0
YHH3_k127_2579200_4 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.00000000000000000000009683 98.0
YHH3_k127_2579200_5 - - - - 0.000000000000000000001226 97.0
YHH3_k127_2579200_6 Protein of unknown function (DUF433) - - - 0.00000000000000000000189 95.0
YHH3_k127_2579200_7 - - - - 0.00000000000003338 76.0
YHH3_k127_2579200_8 Protein of unknown function (DUF433) - - - 0.0000000000008535 73.0
YHH3_k127_2579200_9 Transposase - - - 0.000000000006155 70.0
YHH3_k127_2613023_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 484.0
YHH3_k127_2613023_1 Transcriptional regulatory protein, C terminal K02483 GO:0000160,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0006355,GO:0007154,GO:0007165,GO:0008150,GO:0009889,GO:0009893,GO:0009987,GO:0010035,GO:0010038,GO:0010468,GO:0010556,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0023052,GO:0031323,GO:0031326,GO:0035556,GO:0042221,GO:0042802,GO:0046688,GO:0048518,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004179 317.0
YHH3_k127_2613023_2 drug exporters of the RND superfamily K06994,K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 329.0
YHH3_k127_2613023_3 NUDIX domain K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002303 273.0
YHH3_k127_2613023_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001273 256.0
YHH3_k127_2707823_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 2.816e-284 891.0
YHH3_k127_2707823_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 431.0
YHH3_k127_2707823_2 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006919 427.0
YHH3_k127_2707823_3 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000009668 241.0
YHH3_k127_2707823_4 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000452 206.0
YHH3_k127_2707823_5 lipolytic protein G-D-S-L family K11751 - 3.1.3.5,3.6.1.45 0.00000000000000000000000000000000000000011 164.0
YHH3_k127_2708025_0 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 359.0
YHH3_k127_2708025_2 DNA-templated transcription, initiation K03088 - - 0.0000000002266 64.0
YHH3_k127_2708025_3 SURF4 family K15977 - - 0.00003745 46.0
YHH3_k127_2733933_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000518 311.0
YHH3_k127_2733933_1 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005072 263.0
YHH3_k127_2733933_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000002945 135.0
YHH3_k127_2733933_3 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000000000000000002134 135.0
YHH3_k127_2733933_4 PFAM NAD-dependent epimerase dehydratase - - - 0.000000049 57.0
YHH3_k127_2760457_0 Flagellar hook protein FlgE K02390 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 354.0
YHH3_k127_2760457_1 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.00000000000000000000000000000000000000000000000000004268 194.0
YHH3_k127_2760457_2 Belongs to the flagella basal body rod proteins family K02388 - - 0.00000000000000000000000000000000000000000000187 169.0
YHH3_k127_2760457_3 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.0000000000000000000000000000000000009076 143.0
YHH3_k127_2793195_0 COG3436 Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 543.0
YHH3_k127_2793195_1 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009133 462.0
YHH3_k127_2793195_2 isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003685 470.0
YHH3_k127_2793195_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005813 274.0
YHH3_k127_2793195_4 Bacterial-like globin K06886 - - 0.00000000000000000000000000000000000000000000000000000000001138 208.0
YHH3_k127_2793195_5 isomerase - - - 0.00000000000000000000000000000000000000000000000000001629 191.0
YHH3_k127_2793195_6 PFAM N-formylglutamate amidohydrolase - - - 0.000000000000000000000000000000000000000002173 158.0
YHH3_k127_2793195_7 IS66 Orf2 like protein K07484 - - 0.00000000000000000000000000000000000000009638 154.0
YHH3_k127_2793195_8 Transposase - - - 0.00000000004079 67.0
YHH3_k127_2808468_0 Gliding motility protein GldG - - - 4.68e-203 651.0
YHH3_k127_2808468_1 ABC transporter, ATP-binding protein K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006368 404.0
YHH3_k127_2808468_2 CcmB protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 383.0
YHH3_k127_2808468_3 Domain of unknown function (DUF4340) - - - 0.000000005748 63.0
YHH3_k127_2820501_0 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 458.0
YHH3_k127_2820501_1 DsrE/DsrF/DrsH-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002232 250.0
YHH3_k127_2820501_2 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - - - 0.0000000000000000000000000000000000000000000000000000001937 201.0
YHH3_k127_2820501_3 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000000000000001989 132.0
YHH3_k127_2820501_4 Flagellar assembly protein T, C-terminal domain - - - 0.00000000000000000000000002287 123.0
YHH3_k127_2820501_5 LPP20 lipoprotein K09860 - - 0.000000000000000000001851 102.0
YHH3_k127_2820501_6 pilus assembly - - - 0.000000000003718 72.0
YHH3_k127_2820501_7 - - - - 0.000000000005311 74.0
YHH3_k127_2820501_8 - - - - 0.00001963 47.0
YHH3_k127_2820501_9 - - - - 0.00002032 48.0
YHH3_k127_2853672_0 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 548.0
YHH3_k127_2853672_1 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 338.0
YHH3_k127_2853672_2 Queuosine biosynthesis protein QueC K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 320.0
YHH3_k127_2853672_3 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008387 317.0
YHH3_k127_2853672_4 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000004522 170.0
YHH3_k127_2853672_5 HNH endonuclease - - - 0.0000000000003621 69.0
YHH3_k127_2893540_0 Monoamine oxidase K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005836 571.0
YHH3_k127_2893540_1 ABC transporter, transmembrane region K06147,K11085 - - 0.0000000000000000000000000000000000000000000000000000000000001662 228.0
YHH3_k127_2893540_2 LysR family K21703 - - 0.00000000000000000000000000001312 120.0
YHH3_k127_289571_0 Dinitrogenase iron-molybdenum cofactor K02585 - - 2.189e-232 722.0
YHH3_k127_289571_1 DegT/DnrJ/EryC1/StrS aminotransferase family K13010 - 2.6.1.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 527.0
YHH3_k127_289571_10 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.0000000000000000000000000000000000007915 141.0
YHH3_k127_289571_11 HesB YadR YfhF-family protein - - - 0.0000000000000000000000000000000000008373 142.0
YHH3_k127_289571_12 Protein of unknown function (DUF3024) - - - 0.00000000000000000000000000000000002024 140.0
YHH3_k127_289571_13 4Fe-4S binding domain - - - 0.00000000000000000000000000000000002158 138.0
YHH3_k127_289571_14 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000001436 143.0
YHH3_k127_289571_15 NifZ domain K02597 - - 0.000000000000000000000000000005269 120.0
YHH3_k127_289571_16 NifT/FixU protein K02593 - - 0.0000000000000000000000000002408 115.0
YHH3_k127_289571_17 - - - - 0.00000000000000000004769 92.0
YHH3_k127_289571_18 - - - - 0.0000000000000005364 80.0
YHH3_k127_289571_19 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) K05951 - 2.4.2.37 0.000000000533 64.0
YHH3_k127_289571_2 ADP-ribosylglycohydrolase K05521 - 3.2.2.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000342 437.0
YHH3_k127_289571_20 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) K05951 - 2.4.2.37 0.00001304 49.0
YHH3_k127_289571_21 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0004679 46.0
YHH3_k127_289571_3 DegT/DnrJ/EryC1/StrS aminotransferase family K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009067 419.0
YHH3_k127_289571_4 PFAM ferredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 385.0
YHH3_k127_289571_5 SIR2-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004435 351.0
YHH3_k127_289571_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008913 316.0
YHH3_k127_289571_7 LRV protein FeS4 cluster - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 295.0
YHH3_k127_289571_8 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000006062 153.0
YHH3_k127_289571_9 PFAM NifZ family protein K02597 - - 0.0000000000000000000000000000000000001805 144.0
YHH3_k127_2896981_0 Tex-like protein N-terminal domain protein K06959 - - 1.156e-289 908.0
YHH3_k127_2896981_1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005867 394.0
YHH3_k127_2896981_2 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004194 357.0
YHH3_k127_2896981_3 membrane K15977 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000002963 123.0
YHH3_k127_2910211_0 Histidine Phosphotransfer domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007103 576.0
YHH3_k127_2910211_1 CBS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 534.0
YHH3_k127_2910211_2 response regulator K07315,K11444 - 2.7.7.65,3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005167 345.0
YHH3_k127_2910211_3 CheB methylesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 323.0
YHH3_k127_2910211_4 cAMP phosphodiesterases class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004791 283.0
YHH3_k127_2910211_5 Cytochrome c assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003491 266.0
YHH3_k127_2910211_6 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046907,GO:0048500,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1990904 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000004028 225.0
YHH3_k127_2910211_7 Chemotaxis signal transduction protein K13489 - - 0.0000000000000000000000000000000000000000005035 167.0
YHH3_k127_2910211_8 Methyltransferase, chemotaxis proteins K00575,K13486 - 2.1.1.80 0.000000000000000000000000001869 120.0
YHH3_k127_2929277_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 1.124e-223 705.0
YHH3_k127_2929277_1 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000001579 215.0
YHH3_k127_2929277_2 Bacterial NAD-glutamate dehydrogenase K15371 - 1.4.1.2 0.0000000000000000000000000000000000000000000001713 174.0
YHH3_k127_2929277_3 MotA TolQ ExbB proton channel K02556 - - 0.000000000000000000000000000000000000006699 156.0
YHH3_k127_2929277_4 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.0000000000000000000000000000001292 135.0
YHH3_k127_2931757_0 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 433.0
YHH3_k127_2931757_1 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 371.0
YHH3_k127_2931757_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005639 283.0
YHH3_k127_2931757_3 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008702 274.0
YHH3_k127_2931757_4 peptidase K06194 - - 0.0000000000000183 78.0
YHH3_k127_2953144_0 Outer membrane efflux protein K18139 - - 0.000000000000000000000000000000000000000000000000000000000191 209.0
YHH3_k127_2953144_2 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0000000003366 65.0
YHH3_k127_2991118_0 PFAM Peptidase family U32 K08303 - - 4.472e-196 621.0
YHH3_k127_2991118_1 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 349.0
YHH3_k127_2991118_2 stress-induced protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009691 281.0
YHH3_k127_2991118_3 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035870,GO:0036220,GO:0036222,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046983,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009065 270.0
YHH3_k127_2991118_4 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000009673 241.0
YHH3_k127_2991118_5 Uncharacterised nucleotidyltransferase - - - 0.00000000000000000000000000000000001109 150.0
YHH3_k127_2991118_6 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000005895 63.0
YHH3_k127_2994026_0 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 1.663e-253 794.0
YHH3_k127_2994026_1 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 3.492e-219 697.0
YHH3_k127_2994026_2 Endonuclease/Exonuclease/phosphatase family K07004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000301 266.0
YHH3_k127_2994026_3 Glycerophosphoryl diester phosphodiesterase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002695 250.0
YHH3_k127_2994213_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1107.0
YHH3_k127_2994213_1 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000358 459.0
YHH3_k127_2994213_10 Peptidyl-prolyl cis-trans K03775 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006464,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010467,GO:0016151,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0022417,GO:0031647,GO:0035821,GO:0036211,GO:0042026,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043963,GO:0044003,GO:0044068,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0044501,GO:0046872,GO:0046914,GO:0050821,GO:0050896,GO:0050897,GO:0051082,GO:0051604,GO:0051701,GO:0051704,GO:0051817,GO:0052027,GO:0052250,GO:0065007,GO:0065008,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.000000000000000000000000000000000000000000000000001753 187.0
YHH3_k127_2994213_11 YfaZ precursor - - - 0.0002651 49.0
YHH3_k127_2994213_2 Histidine Phosphotransfer domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008427 443.0
YHH3_k127_2994213_3 Protein of unknown function (DUF808) K09781 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007875 412.0
YHH3_k127_2994213_4 pfam abc K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 351.0
YHH3_k127_2994213_5 Required for the activity of the bacterial periplasmic transport system of putrescine K11069 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 327.0
YHH3_k127_2994213_6 ABC-2 type transporter K09694 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001342 282.0
YHH3_k127_2994213_7 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003974 279.0
YHH3_k127_2994213_8 PFAM secretion protein HlyD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001815 278.0
YHH3_k127_2998472_0 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000004192 237.0
YHH3_k127_2998472_1 SMART Water Stress and Hypersensitive response domain protein - - - 0.000000000000000000000000000001295 127.0
YHH3_k127_2998472_2 LysR family K21703 - - 0.000000000000000000000000001045 114.0
YHH3_k127_3001261_0 PFAM Type II secretion system protein E K02454 - - 1.017e-220 694.0
YHH3_k127_3001261_1 general secretion pathway protein D K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003105 616.0
YHH3_k127_3001261_10 TIGRFAM general secretion pathway protein H K02457 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.00000000000001883 80.0
YHH3_k127_3001261_2 General secretion pathway protein F K02455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 473.0
YHH3_k127_3001261_3 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007011 404.0
YHH3_k127_3001261_4 Cytokinin riboside 5'-monophosphate phosphoribohydrolase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 380.0
YHH3_k127_3001261_5 general secretion pathway protein G K02456 - - 0.00000000000000000000000000000000000000000000000000000000127 204.0
YHH3_k127_3001261_6 Type II secretion system (T2SS), protein J - - - 0.0000000000000000000000000000000000000000006638 166.0
YHH3_k127_3001261_7 General secretion pathway protein C K02452 - - 0.00000000000000000000000000000000000000001497 166.0
YHH3_k127_3001261_8 COG2165 Type II secretory pathway, pseudopilin PulG K02458 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000000000000336 109.0
YHH3_k127_3001261_9 Protein of unknown function (DUF2782) - - - 0.0000000000000000000002614 100.0
YHH3_k127_3008011_0 Diguanylate cyclase - - - 1.132e-219 701.0
YHH3_k127_3008011_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 416.0
YHH3_k127_3008011_2 response regulator K20977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 376.0
YHH3_k127_3008011_3 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005847 342.0
YHH3_k127_3008011_4 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon K03524 GO:0000166,GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004077,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0006082,GO:0006464,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009305,GO:0009374,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0017053,GO:0017076,GO:0017144,GO:0018130,GO:0018271,GO:0019538,GO:0019752,GO:0019842,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032991,GO:0033218,GO:0033293,GO:0034641,GO:0035639,GO:0036094,GO:0036211,GO:0042364,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046983,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1990837 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000000000000009661 259.0
YHH3_k127_3008011_5 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000002308 206.0
YHH3_k127_3008011_6 - - - - 0.000000000000000000000002144 102.0
YHH3_k127_3008011_7 - - - - 0.0000000000000000001937 97.0
YHH3_k127_3008011_8 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K20978 - - 0.0000000000000007402 81.0
YHH3_k127_3008011_9 - - - - 0.000001867 51.0
YHH3_k127_3044019_0 Cytochrome b(N-terminal)/b6/petB K00412 - - 1.58e-196 620.0
YHH3_k127_3044019_1 PFAM Alpha beta hydrolase K07019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007047 381.0
YHH3_k127_3044019_2 FG-GAP repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000002961 241.0
YHH3_k127_3044019_3 crp fnr family - - - 0.0000000000000000000000000000000000000000000000000000000000007624 211.0
YHH3_k127_3044019_4 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000003853 201.0
YHH3_k127_3044019_5 Cytochrome C1 family K00413 - - 0.000000000000000000000000000000000000000000000001594 184.0
YHH3_k127_3044019_6 hyperosmotic response K04065 - - 0.0000000000000000000000000000000000000001247 162.0
YHH3_k127_3044019_7 - - - - 0.00000000000000000000000000000009554 127.0
YHH3_k127_3044019_8 Protein involved in outer membrane biogenesis - - - 0.000002469 60.0
YHH3_k127_3048728_0 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 467.0
YHH3_k127_3048728_1 Glucose-1-phosphate cytidylyltransferase K00978 - 2.7.7.33 0.0000000000000000000000000000000000000000000000000000000000000000002583 231.0
YHH3_k127_3048728_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000008763 198.0
YHH3_k127_30849_0 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 463.0
YHH3_k127_30849_1 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 366.0
YHH3_k127_30849_10 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0000000000000003635 79.0
YHH3_k127_30849_2 chemotaxis, protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005499 329.0
YHH3_k127_30849_3 Plays a role in the flagellum-specific transport system K02419 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 304.0
YHH3_k127_30849_4 Role in flagellar biosynthesis K02421 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006054 247.0
YHH3_k127_30849_5 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 GO:0005575,GO:0005623,GO:0005886,GO:0009288,GO:0009425,GO:0016020,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000006485 169.0
YHH3_k127_30849_6 Flagellar basal body-associated protein FliL - - - 0.000000000000000000000000000000001284 136.0
YHH3_k127_30849_7 Flagellar hook-length control protein K02414 - - 0.00000000000000000000000002037 114.0
YHH3_k127_30849_8 Role in flagellar biosynthesis K02420 - - 0.000000000000000000000005619 106.0
YHH3_k127_30849_9 Flagellar biosynthesis protein, FliO K02418 - - 0.000000000000000000006195 97.0
YHH3_k127_3164362_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000804 519.0
YHH3_k127_3164362_1 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0042254,GO:0042255,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0065003,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004302 446.0
YHH3_k127_3164362_2 - - - - 0.0000000000000000000000000005285 125.0
YHH3_k127_3164362_3 - K20326 - - 0.0000000000001243 77.0
YHH3_k127_3221092_0 type I secretion outer membrane protein, TolC K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 354.0
YHH3_k127_3221092_1 O-methyltransferase K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000008416 248.0
YHH3_k127_3221092_2 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.000000000000000000000000000000000000000000000000000000001313 205.0
YHH3_k127_3221092_3 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000008855 165.0
YHH3_k127_3221092_4 NifQ K15790 - - 0.0000000000000000000000000000003698 123.0
YHH3_k127_323023_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 2.768e-203 642.0
YHH3_k127_323023_1 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 607.0
YHH3_k127_323023_2 Type IV Pilus-assembly protein W K02672 - - 0.00000000000000000000000000003529 131.0
YHH3_k127_323023_3 Prokaryotic N-terminal methylation motif K02671 - - 0.0000000000000000000000000001155 123.0
YHH3_k127_323023_4 Type II transport protein GspH K08084 - - 0.0000000000000000000000005648 111.0
YHH3_k127_323023_5 - - - - 0.0000000000001404 72.0
YHH3_k127_323023_6 PilX N-terminal - - - 0.000000001348 65.0
YHH3_k127_3245164_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 8.807e-214 676.0
YHH3_k127_3245164_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000492 463.0
YHH3_k127_3245164_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009885 454.0
YHH3_k127_3245164_3 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 390.0
YHH3_k127_3245164_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007272 245.0
YHH3_k127_3245164_5 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000000000000306 197.0
YHH3_k127_3245164_6 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000002068 139.0
YHH3_k127_3245164_7 COGs COG1315 polymerase most protein contain PALM domain HD hydrolase domain and Zn-ribbon domain K09749 - - 0.0000000000000000000000000000008921 141.0
YHH3_k127_3263052_0 signal transduction histidine kinase - - - 2.22e-206 666.0
YHH3_k127_3263052_1 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000006109 233.0
YHH3_k127_3263052_2 Domain of unknown function (DUF4390) - - - 0.000000000000000000000000000000000000006588 153.0
YHH3_k127_3263052_3 response regulator receiver K13599 - - 0.000000000000000000000000003987 111.0
YHH3_k127_3266033_0 AAA domain K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 449.0
YHH3_k127_3266033_1 - - - - 0.000000000000000000000000000000000000000000000002534 178.0
YHH3_k127_3266033_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00008761 51.0
YHH3_k127_3306104_0 GDYXXLXY protein - - - 0.0000000000000000000000000000000000000000000000000000009372 205.0
YHH3_k127_3306104_1 Predicted membrane protein (DUF2157) - - - 0.000000000000000000000000000000000000000000000000000001347 208.0
YHH3_k127_3306104_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000005784 119.0
YHH3_k127_3306104_3 Integrin alpha (beta-propellor repeats). - - - 0.00001178 57.0
YHH3_k127_3323017_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 1.439e-247 779.0
YHH3_k127_3323017_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0008479,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 580.0
YHH3_k127_3323017_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 404.0
YHH3_k127_3323017_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 378.0
YHH3_k127_3323017_4 TIGRFAM Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000001585 238.0
YHH3_k127_3323017_5 Preprotein translocase subunit YajC K03210 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031522,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000005552 138.0
YHH3_k127_3323017_6 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000003708 125.0
YHH3_k127_332683_0 response regulator receiver K02481 - - 9.04e-206 648.0
YHH3_k127_332683_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007753 286.0
YHH3_k127_332683_2 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000006864 151.0
YHH3_k127_3338989_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 6.492e-243 762.0
YHH3_k127_3338989_1 Type II secretion system (T2SS), protein F K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006164 391.0
YHH3_k127_3338989_2 - - - - 0.0000000000000000000000000000000000000004853 168.0
YHH3_k127_3338989_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000005741 151.0
YHH3_k127_3338989_4 general secretion pathway protein - - - 0.00000000000000003973 92.0
YHH3_k127_3338989_5 - - - - 0.00000000000005704 80.0
YHH3_k127_3338989_6 - - - - 0.0000001114 60.0
YHH3_k127_3363561_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 5.303e-262 812.0
YHH3_k127_3363561_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 537.0
YHH3_k127_3363561_2 exonuclease recj K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 325.0
YHH3_k127_3363561_3 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000000000000000001041 150.0
YHH3_k127_3391916_0 PFAM Aminotransferase class-III K01845 - 5.4.3.8 4.547e-217 679.0
YHH3_k127_3391916_1 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 382.0
YHH3_k127_3391916_2 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.00000000000000000000000000000000000000000000000000000002311 208.0
YHH3_k127_3391916_3 rubredoxin - - - 0.000000000000000000000004061 102.0
YHH3_k127_3404539_0 Phage tail sheath protein K06907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009953 298.0
YHH3_k127_3404539_1 transferase activity, transferring glycosyl groups K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001046 263.0
YHH3_k127_3404539_2 Beta propeller domain - - - 0.00000000000000000000000000000000000000000000000000000000008003 226.0
YHH3_k127_3404539_3 proteasomal ubiquitin-independent protein catabolic process K10456 GO:0000151,GO:0001701,GO:0001887,GO:0003674,GO:0003779,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005703,GO:0005737,GO:0005783,GO:0005815,GO:0005829,GO:0005856,GO:0005884,GO:0005911,GO:0005912,GO:0005913,GO:0005924,GO:0005925,GO:0006355,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006979,GO:0007275,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009889,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010468,GO:0010498,GO:0010499,GO:0010556,GO:0010604,GO:0010605,GO:0010629,GO:0012505,GO:0014070,GO:0015629,GO:0015630,GO:0016043,GO:0016567,GO:0016579,GO:0019219,GO:0019222,GO:0019538,GO:0019904,GO:0019941,GO:0022607,GO:0030054,GO:0030055,GO:0030162,GO:0030163,GO:0030496,GO:0030856,GO:0031323,GO:0031325,GO:0031326,GO:0031329,GO:0031331,GO:0031461,GO:0031463,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0034097,GO:0035902,GO:0036211,GO:0042176,GO:0042221,GO:0042802,GO:0042803,GO:0042994,GO:0043009,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043433,GO:0043632,GO:0043687,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045185,GO:0045595,GO:0045604,GO:0045682,GO:0045732,GO:0045862,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051090,GO:0051171,GO:0051173,GO:0051179,GO:0051220,GO:0051235,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051259,GO:0051603,GO:0051716,GO:0051865,GO:0060255,GO:0061136,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070161,GO:0070646,GO:0070647,GO:0070670,GO:0070887,GO:0071310,GO:0071345,GO:0071353,GO:0071407,GO:0071704,GO:0071840,GO:0080090,GO:0097066,GO:0097718,GO:0098687,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1902494,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1903506,GO:1990234,GO:2000026,GO:2000058,GO:2000060,GO:2000112,GO:2001141 - 0.0000000000001401 83.0
YHH3_k127_3404539_4 - - - - 0.000001734 60.0
YHH3_k127_344614_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1211.0
YHH3_k127_344614_1 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 361.0
YHH3_k127_344614_2 Outer membrane efflux protein - - - 0.0000000000000000000000001015 111.0
YHH3_k127_3478846_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000745 530.0
YHH3_k127_3478846_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006536,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008883,GO:0009058,GO:0009064,GO:0009987,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019353,GO:0019438,GO:0019752,GO:0033013,GO:0033014,GO:0033526,GO:0034641,GO:0042168,GO:0042440,GO:0042802,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 530.0
YHH3_k127_3478846_2 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007412 464.0
YHH3_k127_3478846_3 sulphate transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004205 293.0
YHH3_k127_3478846_4 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000003015 260.0
YHH3_k127_3498109_0 Pfam Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000001151 205.0
YHH3_k127_3498109_1 COG1404 Subtilisin-like serine proteases K14645 - - 0.0000000000000000000000000001484 126.0
YHH3_k127_3498109_2 Histidine kinase - - - 0.000000000000000000000000006128 113.0
YHH3_k127_3498109_3 NMT1-like family K02051 - - 0.0000005665 55.0
YHH3_k127_3509394_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009816 577.0
YHH3_k127_3509394_1 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000001133 223.0
YHH3_k127_3523646_0 Belongs to the mannose-6-phosphate isomerase type 2 family K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 600.0
YHH3_k127_3523646_1 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 463.0
YHH3_k127_3523646_10 competence protein ComEA K02237 - - 0.0000000000000000003429 92.0
YHH3_k127_3523646_2 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 466.0
YHH3_k127_3523646_3 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 410.0
YHH3_k127_3523646_4 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 365.0
YHH3_k127_3523646_5 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003375 282.0
YHH3_k127_3523646_6 PFAM Glycosyl transferase family 4 K02851,K13007 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009794 275.0
YHH3_k127_3523646_7 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.0000000000000000000000000000000000000000000001277 175.0
YHH3_k127_3523646_8 Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components K05785 - - 0.0000000000000000000000000000000000000000001991 164.0
YHH3_k127_3523646_9 O-Antigen ligase - - - 0.00000000000000000000000000000002528 140.0
YHH3_k127_3525314_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1460.0
YHH3_k127_3525314_1 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 574.0
YHH3_k127_3525314_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 372.0
YHH3_k127_3525314_3 Haemolysin-type calcium binding protein related domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 314.0
YHH3_k127_3525314_4 Hemolysin-type calcium-binding - - - 0.000000000000000000000000000000000000000000000007218 180.0
YHH3_k127_3525314_5 Mut7-C RNAse domain - - - 0.00001581 48.0
YHH3_k127_3553353_0 SNARE associated Golgi protein - - - 1.519e-320 996.0
YHH3_k127_3553353_1 pdz dhr glgf - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 526.0
YHH3_k127_3553353_2 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 0.000000000000000000000000000000000000000000000000000003617 195.0
YHH3_k127_3553353_3 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000006352 184.0
YHH3_k127_3553353_4 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) K20978 - - 0.000000000000000000000001819 106.0
YHH3_k127_3592508_0 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 535.0
YHH3_k127_3592508_1 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 354.0
YHH3_k127_3592508_2 Nucleotidyl transferase K00966,K00992 GO:0000166,GO:0000270,GO:0000287,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0005488,GO:0006022,GO:0006040,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0019752,GO:0030203,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044281,GO:0046872,GO:0070569,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.7.13,2.7.7.99 0.000000000000000000000000000000000000000000000000000000000006234 211.0
YHH3_k127_3592508_3 PFAM Nucleotidyl transferase K00992 - 2.7.7.99 0.0000000000000000000003117 101.0
YHH3_k127_3592508_4 Protein of unknown function (DUF465) K09794 - - 0.00000000009948 65.0
YHH3_k127_3612961_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007855 452.0
YHH3_k127_3612961_1 ABC transporter permease K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 381.0
YHH3_k127_3612961_2 PFAM toluene tolerance K07323 - - 0.0000000000000000000000000000000000000000000000000209 186.0
YHH3_k127_3612961_3 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000009688 179.0
YHH3_k127_3612961_4 Belongs to the BolA IbaG family - - - 0.0000000000000000000008502 97.0
YHH3_k127_3612961_5 STAS domain K07122 - - 0.0008302 46.0
YHH3_k127_3627537_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 554.0
YHH3_k127_3627537_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 GO:0003674,GO:0003824,GO:0003942,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 503.0
YHH3_k127_3627537_10 PFAM CheC domain protein K03410 - - 0.0000000000000000000000000000000000000000000000000000000000000000001227 236.0
YHH3_k127_3627537_11 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000009543 223.0
YHH3_k127_3627537_12 Required for insertion of 4Fe-4S clusters K15724 - - 0.00000000000000000000000000000000000000000000000000000009719 196.0
YHH3_k127_3627537_13 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000003402 169.0
YHH3_k127_3627537_14 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000775 138.0
YHH3_k127_3627537_15 - - - - 0.000000000000000000000000000000006253 129.0
YHH3_k127_3627537_16 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000003246 136.0
YHH3_k127_3627537_17 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000007211 113.0
YHH3_k127_3627537_18 - - - - 0.0000000000000000000000016 103.0
YHH3_k127_3627537_19 - - - - 0.0000000000000000002708 87.0
YHH3_k127_3627537_2 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 473.0
YHH3_k127_3627537_20 - - - - 0.0000000000009377 68.0
YHH3_k127_3627537_21 - - - - 0.0000000005229 69.0
YHH3_k127_3627537_3 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007699 445.0
YHH3_k127_3627537_4 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 421.0
YHH3_k127_3627537_5 Diguanylate cyclase K13069 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0007155,GO:0008150,GO:0008270,GO:0009987,GO:0010639,GO:0016740,GO:0016772,GO:0016779,GO:0022610,GO:0031344,GO:0031345,GO:0031589,GO:0032879,GO:0033043,GO:0042710,GO:0042802,GO:0043167,GO:0043169,GO:0043708,GO:0043709,GO:0043900,GO:0043902,GO:0044010,GO:0044087,GO:0044464,GO:0044764,GO:0046872,GO:0046914,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051270,GO:0051271,GO:0051704,GO:0052621,GO:0060187,GO:0060491,GO:0065007,GO:0090605,GO:0090609,GO:1900190,GO:1900192,GO:1900231,GO:1900233,GO:1902115,GO:1902116,GO:1902208,GO:1902209 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 398.0
YHH3_k127_3627537_6 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 368.0
YHH3_k127_3627537_7 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 330.0
YHH3_k127_3627537_8 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 322.0
YHH3_k127_3627537_9 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006499 320.0
YHH3_k127_3666408_0 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 372.0
YHH3_k127_3666408_1 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 286.0
YHH3_k127_3666408_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000158 247.0
YHH3_k127_3666408_3 PFAM heat shock protein DnaJ - - - 0.00000000000000000000000000000000000000000000000000001132 198.0
YHH3_k127_3666408_4 Two component signalling adaptor domain K03415 - - 0.0000000000000000000000001303 107.0
YHH3_k127_3666408_5 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000008317 106.0
YHH3_k127_3666408_6 Prolyl 4-hydroxylase alpha subunit homologues. K07336 - - 0.000000000000001256 78.0
YHH3_k127_3666408_7 Iron-containing redox enzyme K06137 - 1.3.3.11 0.00009747 47.0
YHH3_k127_3671647_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 1.882e-210 661.0
YHH3_k127_3671647_1 Ammonium Transporter Family K03320,K06580 - - 6.378e-200 628.0
YHH3_k127_3671647_10 Putative DNA-binding domain - - - 0.0000000000000000000000000000000000000000123 163.0
YHH3_k127_3671647_11 Domain of unknown function (DUF4399) - - - 0.000000000000000000000000004857 112.0
YHH3_k127_3671647_12 - - - - 0.00000003455 59.0
YHH3_k127_3671647_13 helix_turn_helix, Lux Regulon - - - 0.0001661 52.0
YHH3_k127_3671647_2 PFAM Lytic K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 475.0
YHH3_k127_3671647_3 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 465.0
YHH3_k127_3671647_4 PFAM PhoH family protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 427.0
YHH3_k127_3671647_5 Protein of unknown function (DUF692) K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 399.0
YHH3_k127_3671647_6 Mg2 and Co2 transporter CorC K06189 GO:0001897,GO:0001906,GO:0001907,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009405,GO:0009987,GO:0016020,GO:0019835,GO:0019836,GO:0031640,GO:0035821,GO:0044003,GO:0044004,GO:0044179,GO:0044364,GO:0044403,GO:0044419,GO:0044464,GO:0044764,GO:0051701,GO:0051704,GO:0051715,GO:0051801,GO:0051817,GO:0051818,GO:0051883,GO:0052331,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 341.0
YHH3_k127_3671647_7 MazG nucleotide pyrophosphohydrolase domain K04765 - 3.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003023 273.0
YHH3_k127_3671647_8 response regulator receiver K13041 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001611 246.0
YHH3_k127_3671647_9 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000000000000006518 165.0
YHH3_k127_3679455_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 GO:0003674,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 515.0
YHH3_k127_3679455_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 316.0
YHH3_k127_3679455_10 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000000009858 114.0
YHH3_k127_3679455_11 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0000000000000000000000001088 108.0
YHH3_k127_3679455_12 PFAM Uncharacterised protein family UPF0150 - - - 0.0000000000000000000004104 102.0
YHH3_k127_3679455_13 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.00000000000000000002626 92.0
YHH3_k127_3679455_14 Transposase IS200 like - - - 0.000000000000000001068 89.0
YHH3_k127_3679455_15 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000003307 55.0
YHH3_k127_3679455_2 PFAM UBA THIF-type NAD FAD binding K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001586 284.0
YHH3_k127_3679455_3 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000005514 222.0
YHH3_k127_3679455_4 PFAM molybdopterin biosynthesis MoaE K03635 - 2.8.1.12 0.000000000000000000000000000000000000000000000000002647 186.0
YHH3_k127_3679455_5 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000000000001165 175.0
YHH3_k127_3679455_6 Domain of unknown function (DUF4160) - - - 0.000000000000000000000000000000000000000000001393 166.0
YHH3_k127_3679455_7 PFAM Kelch motif - - - 0.0000000000000000000000000000000000000046 158.0
YHH3_k127_3679455_8 Phosphoglycerate mutase family K02226,K22316 GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006401,GO:0006725,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016891,GO:0016893,GO:0017144,GO:0018130,GO:0019438,GO:0019439,GO:0032296,GO:0033013,GO:0033014,GO:0034641,GO:0034655,GO:0042364,GO:0042578,GO:0043170,GO:0043755,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046700,GO:0051186,GO:0051188,GO:0071667,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 3.1.26.4,3.1.3.73 0.00000000000000000000000000000000003146 142.0
YHH3_k127_3679455_9 Protein of unknown function (DUF2442) - - - 0.000000000000000000000000000236 115.0
YHH3_k127_3690759_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 7.19e-288 900.0
YHH3_k127_3690759_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 488.0
YHH3_k127_3690759_2 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 465.0
YHH3_k127_3690759_3 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 460.0
YHH3_k127_3690759_4 Ammonium Transporter Family K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 460.0
YHH3_k127_3690759_5 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009993 381.0
YHH3_k127_3690759_6 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000001404 254.0
YHH3_k127_3690759_7 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000001313 248.0
YHH3_k127_3690759_8 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.000000000000000000000000000000000000007911 149.0
YHH3_k127_3690759_9 Belongs to the UPF0250 family K09158 - - 0.000000000000003968 79.0
YHH3_k127_3741023_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1066.0
YHH3_k127_3741023_1 Histidine kinase K02482,K14986 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 354.0
YHH3_k127_3741023_2 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000009469 235.0
YHH3_k127_3741023_3 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000000000000000000001412 207.0
YHH3_k127_3803685_0 COG0514 Superfamily II DNA helicase K03654 - 3.6.4.12 1.328e-264 831.0
YHH3_k127_3803685_1 Histidine Phosphotransfer domain - - - 0.0000000000000000000000000000000000000000000458 177.0
YHH3_k127_3803685_2 protein conserved in bacteria K09912 - - 0.0000000000000000000000000000000000000001709 156.0
YHH3_k127_3805070_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 2.121e-252 791.0
YHH3_k127_3805070_1 Helix-turn-helix XRE-family like proteins K07726 - - 0.0000000000002814 71.0
YHH3_k127_3808286_0 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008338 485.0
YHH3_k127_3808286_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001682 283.0
YHH3_k127_3808286_2 Group 1 truncated hemoglobin K06886 - - 0.0000000000000000000000000000000000000000000000000000000000008191 213.0
YHH3_k127_3808286_3 ribosomal large subunit export from nucleus - - - 0.000000000000000000000000000000000000000000000000000000001741 204.0
YHH3_k127_3819484_0 Belongs to the peptidase S8 family K17734 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 416.0
YHH3_k127_3819484_1 radical SAM domain protein K03716 - 4.1.99.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005594 374.0
YHH3_k127_3819484_2 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001304 267.0
YHH3_k127_3819484_3 Belongs to the serpin family K13963 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004792 254.0
YHH3_k127_3819484_4 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively - - - 0.0000000000000000000000007138 115.0
YHH3_k127_3833346_0 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005654 336.0
YHH3_k127_3833346_1 Hydrolase, TatD family K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 325.0
YHH3_k127_3833346_2 Protein of unknown function (DUF938) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006648 271.0
YHH3_k127_3833346_3 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000004011 243.0
YHH3_k127_3833346_4 DNA polymerase III, delta' K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000003963 214.0
YHH3_k127_3833346_5 PilZ domain K02676 - - 0.000000000000000000000000000000000000000000000009791 174.0
YHH3_k127_3847502_0 protein methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 288.0
YHH3_k127_3847502_1 Part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006,K02008 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007633 263.0
YHH3_k127_3847502_2 PFAM Phosphoglycerate mutase K08296 - - 0.00000000000000000000000000000007919 133.0
YHH3_k127_3873197_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.0 1177.0
YHH3_k127_3873197_1 Monomeric isocitrate dehydrogenase K00031 - 1.1.1.42 0.0 1080.0
YHH3_k127_3873197_10 COG0188 Type IIA topoisomerase (DNA gyrase topo II, topoisomerase IV), A subunit - - - 0.0000000000000000001348 98.0
YHH3_k127_3873197_2 Collagenase K08303 - - 8.557e-305 945.0
YHH3_k127_3873197_3 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007325 539.0
YHH3_k127_3873197_4 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 516.0
YHH3_k127_3873197_5 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 505.0
YHH3_k127_3873197_6 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 311.0
YHH3_k127_3873197_7 - - - - 0.0000000000000000000000000000000000000000006355 164.0
YHH3_k127_3873197_8 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000009961 128.0
YHH3_k127_3873197_9 HxlR-like helix-turn-helix - - - 0.0000000000000000000004509 102.0
YHH3_k127_387738_0 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003486 516.0
YHH3_k127_387738_1 Alpha/beta hydrolase family K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 491.0
YHH3_k127_387738_2 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004142 370.0
YHH3_k127_387738_3 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005563 327.0
YHH3_k127_387738_4 Belongs to the GARS family K01945,K13713 GO:0000166,GO:0003674,GO:0003824,GO:0004637,GO:0005488,GO:0005524,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.6,6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000006832 264.0
YHH3_k127_387738_5 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000000000000000000000000000000000000000000000001056 214.0
YHH3_k127_387738_6 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.000000000000000000000000000000000000001188 154.0
YHH3_k127_3916857_0 PFAM Alcohol dehydrogenase GroES-like domain K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 423.0
YHH3_k127_3916857_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 356.0
YHH3_k127_3916857_2 PFAM Adenylate cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000006488 207.0
YHH3_k127_3916857_3 PFAM blue (type 1) copper domain protein - - - 0.000000000000001691 80.0
YHH3_k127_3916857_4 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.00000000008864 68.0
YHH3_k127_3924381_0 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001039 270.0
YHH3_k127_3924381_1 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000002515 236.0
YHH3_k127_3924381_2 TIGRFAM Outer membrane protein - - - 0.00000000000002168 88.0
YHH3_k127_3991703_0 AMP-binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 456.0
YHH3_k127_3991703_1 Iron-containing redox enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 295.0
YHH3_k127_3991703_2 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 286.0
YHH3_k127_3991703_3 Histidine kinase-like ATPase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002711 275.0
YHH3_k127_3991703_4 Peptidoglycan-synthase activator LpoB K07337 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000493 259.0
YHH3_k127_3991703_5 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006283 265.0
YHH3_k127_3991703_6 Thermostable hemolysin - - - 0.0000000000000000000000000000000000004912 149.0
YHH3_k127_3991703_7 membrane-associated metal-dependent hydrolase K03760,K19353 - 2.7.8.43 0.0000000000000000000000001746 107.0
YHH3_k127_3991703_8 membrane-associated metal-dependent hydrolase K03760,K19353 - 2.7.8.43 0.000007034 51.0
YHH3_k127_4007081_0 PFAM FAD linked oxidase domain protein K03777 - 1.1.5.12 7.573e-200 632.0
YHH3_k127_4007081_1 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271,K12961 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000183 240.0
YHH3_k127_4007081_2 PFAM LppC K07121 - - 0.0000000000000000000000000000000000000000000000000000000008509 209.0
YHH3_k127_4007081_3 PFAM transport-associated - - - 0.0000000000000000000000000000000000246 143.0
YHH3_k127_4007081_4 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000002958 108.0
YHH3_k127_4007081_5 TIGRFAM phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 - - 0.00000000000000000001286 94.0
YHH3_k127_4029738_0 Methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 500.0
YHH3_k127_4029738_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 400.0
YHH3_k127_4029738_2 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 326.0
YHH3_k127_4029738_3 antibiotic biosynthetic process K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005439 284.0
YHH3_k127_4029738_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000001337 225.0
YHH3_k127_4029738_5 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000008551 118.0
YHH3_k127_4038823_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1018.0
YHH3_k127_4038823_1 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006829 384.0
YHH3_k127_4038823_2 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009914 270.0
YHH3_k127_4038823_3 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 GO:0000096,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0010309,GO:0016491,GO:0016701,GO:0016702,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0051213,GO:0055114,GO:0071704,GO:1901564,GO:1901605 1.13.11.53,1.13.11.54 0.00000000000000000000000000000000000000000000000000000000000000000000000008763 252.0
YHH3_k127_4038823_4 PBS lyase HEAT domain protein repeat-containing protein - - - 0.000000000004473 75.0
YHH3_k127_407184_0 Chase2 domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004328 557.0
YHH3_k127_407184_1 Peptidase m48 ste24p - - - 0.00000000000000000000000000000000000000000000000000000187 198.0
YHH3_k127_407184_2 Ig-like domain from next to BRCA1 gene - - - 0.0000000000000000000000000000000003245 146.0
YHH3_k127_407184_3 Sh3 type 3 domain protein K02450,K12132 - 2.7.11.1 0.0000000000000000000000005395 112.0
YHH3_k127_4073082_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1081.0
YHH3_k127_4073082_1 Amidase K01457 - 3.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 577.0
YHH3_k127_4103858_0 2-keto-4-pentenoate hydratase K02554 - 4.2.1.80 0.000000000000000000000000000000000000000000000000000000000000000004079 235.0
YHH3_k127_4103858_1 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000003636 230.0
YHH3_k127_4103858_10 EF-hand, calcium binding motif - - - 0.00001865 53.0
YHH3_k127_4103858_2 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000000000001746 209.0
YHH3_k127_4103858_3 drug resistance transporter Bcr CflA subfamily K07552 - - 0.00000000000000000000000000000000000000000005804 167.0
YHH3_k127_4103858_4 MazG-like family - - - 0.0000000000000000000000000000000000000003899 152.0
YHH3_k127_4103858_5 - - - - 0.0000000000000000000000000000000006623 135.0
YHH3_k127_4103858_6 Belongs to the pirin family K06911 - - 0.00000000000000000000000000485 111.0
YHH3_k127_4103858_9 Belongs to the pirin family K06911 - - 0.0000000000001812 70.0
YHH3_k127_4151887_0 PFAM O-methyltransferase K00588 - 2.1.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005344 308.0
YHH3_k127_4151887_1 Large extracellular alpha-helical protein - - - 0.0000000000000000000000000002396 132.0
YHH3_k127_4151887_2 heat shock protein binding K05801 - - 0.00000000000000009983 85.0
YHH3_k127_4151887_3 - - - - 0.00002329 54.0
YHH3_k127_4174496_0 heat shock protein binding - - - 1.742e-288 911.0
YHH3_k127_4174496_1 heat shock protein binding - - - 9.729e-202 646.0
YHH3_k127_4174496_10 PFAM Uncharacterised protein family UPF0324 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001952 270.0
YHH3_k127_4174496_11 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000001989 248.0
YHH3_k127_4174496_12 protein localization to T-tubule - - - 0.000000000000000000000000000000000000000000000000000000004948 227.0
YHH3_k127_4174496_13 Bacterial protein of unknown function (DUF882) - - - 0.00000000000000000000000000000000000000000000003058 176.0
YHH3_k127_4174496_14 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000002297 170.0
YHH3_k127_4174496_15 Sel1-like repeats. K07126 - - 0.000000000000000000000000006967 129.0
YHH3_k127_4174496_16 Sel1 domain protein repeat-containing protein K07126 - - 0.000000000000000005973 94.0
YHH3_k127_4174496_17 - - - - 0.000000000002001 74.0
YHH3_k127_4174496_18 Involved in the degradation of phospho-AI-2, thereby terminating induction of the lsr operon and closing the AI-2 signaling cycle. Catalyzes the conversion of (4S)-4-hydroxy-5- phosphonooxypentane-2,3-dione (P-DPD) to 3-hydroxy-5- phosphonooxypentane-2,4-dione (P-HPD) K11530 GO:0002952,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016853,GO:0044424,GO:0044444,GO:0044464,GO:0055114 5.3.1.32 0.00000000001954 67.0
YHH3_k127_4174496_19 PFAM Na Picotransporter K03324 - - 0.0000000001975 68.0
YHH3_k127_4174496_2 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002672 554.0
YHH3_k127_4174496_3 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 478.0
YHH3_k127_4174496_4 Iron-containing alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000871 473.0
YHH3_k127_4174496_5 O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006227 390.0
YHH3_k127_4174496_6 Na Pi-cotransporter K03324 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008968 352.0
YHH3_k127_4174496_7 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004183 336.0
YHH3_k127_4174496_8 Peptidoglycan-binding domain 1 protein K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000413 300.0
YHH3_k127_4174496_9 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 288.0
YHH3_k127_4223929_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 1.756e-233 735.0
YHH3_k127_4223929_1 protein conserved in bacteria (DUF2333) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 438.0
YHH3_k127_4223929_2 PFAM Nickel transport complex, NikM subunit, transmembrane K02009 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 299.0
YHH3_k127_4223929_3 nickel-responsive regulator K07722 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000001271 176.0
YHH3_k127_4223929_4 Surface antigen - - - 0.00000000000000000000000000000000000000002339 159.0
YHH3_k127_4223929_5 - - - - 0.000000000000000000000001999 111.0
YHH3_k127_4223929_6 Large extracellular alpha-helical protein K16915 - - 0.000000000000000002267 91.0
YHH3_k127_4223929_7 Surface antigen - - - 0.00014 47.0
YHH3_k127_4319538_0 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007838 428.0
YHH3_k127_4319538_1 Diguanylate cyclase - - - 0.00000000000000000000000000000007968 130.0
YHH3_k127_4319538_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000008642 138.0
YHH3_k127_4319538_3 PFAM Carbohydrate-selective porin OprB - - - 0.000000000000000001344 98.0
YHH3_k127_4319538_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000317 89.0
YHH3_k127_4323249_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 7.65e-220 689.0
YHH3_k127_4323249_1 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 492.0
YHH3_k127_4323249_2 PFAM Fatty acid hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005206 353.0
YHH3_k127_4323249_3 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964 - 4.2.1.109 0.0000000000000000000000000000000000000000000000000000000005901 209.0
YHH3_k127_4323249_4 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000000001089 193.0
YHH3_k127_4323249_5 PFAM cytochrome c class I K08738 - - 0.0000000000000000000000001574 111.0
YHH3_k127_432560_0 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004323 297.0
YHH3_k127_432560_1 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.000000000000000000000000000000000000000000000000000000000000000000000000006059 264.0
YHH3_k127_432560_2 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain K11444 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000004251 241.0
YHH3_k127_432560_3 MEKHLA domain - - - 0.000000000000000000000000000000000000000000000000001488 186.0
YHH3_k127_432560_4 Response regulator receiver - - - 0.0000000000000000000000000000000000001782 147.0
YHH3_k127_432560_5 Cytochrome c K02030,K17760,K19713 - 1.1.9.1,1.8.2.2 0.00000000000000000000000000000000004308 145.0
YHH3_k127_432560_6 membrane - - - 0.00003664 51.0
YHH3_k127_4353063_0 GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 4.42e-230 716.0
YHH3_k127_4353063_1 HpcH/HpaI aldolase/citrate lyase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004268 523.0
YHH3_k127_4353063_10 Bacterial SH3 domain homologues K07184 - - 0.00000000000000000000000000000000000000000000000006093 186.0
YHH3_k127_4353063_11 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000000001161 162.0
YHH3_k127_4353063_12 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000000000000000000003507 154.0
YHH3_k127_4353063_13 diguanylate cyclase - - - 0.00000000000000000000000000000000000000155 164.0
YHH3_k127_4353063_14 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000001436 136.0
YHH3_k127_4353063_15 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000001746 133.0
YHH3_k127_4353063_16 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.000000000000006477 77.0
YHH3_k127_4353063_17 - - - - 0.0000000002521 63.0
YHH3_k127_4353063_18 - - - - 0.000000007859 57.0
YHH3_k127_4353063_2 NmrA-like family K01784,K12448 - 5.1.3.2,5.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 441.0
YHH3_k127_4353063_3 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 427.0
YHH3_k127_4353063_4 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 333.0
YHH3_k127_4353063_5 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006761 323.0
YHH3_k127_4353063_6 Forms part of the polypeptide exit tunnel K02926 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009087 256.0
YHH3_k127_4353063_7 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001691 240.0
YHH3_k127_4353063_8 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.000000000000000000000000000000000000000000000000000001088 203.0
YHH3_k127_4353063_9 Involved in the binding of tRNA to the ribosomes K02946 GO:0001072,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0015935,GO:0019219,GO:0019222,GO:0019538,GO:0022626,GO:0022627,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0140110,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000002271 191.0
YHH3_k127_4372897_0 Involved in the TonB-independent uptake of proteins K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 404.0
YHH3_k127_4372897_1 MotA TolQ ExbB proton channel K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005368 284.0
YHH3_k127_4372897_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000003615 192.0
YHH3_k127_4372897_3 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000000000008168 180.0
YHH3_k127_4372897_4 Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000000000000000000000000000000002074 178.0
YHH3_k127_4372897_5 Tol-Pal system-associated acyl-CoA thioesterase K07107 - - 0.000000000000000000000000000000000000000512 153.0
YHH3_k127_4372897_6 TonB C terminal - - - 0.000000000000187 81.0
YHH3_k127_4418135_0 daunorubicin resistance ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000438 222.0
YHH3_k127_4418135_1 Represses a number of genes involved in the response to DNA damage (SOS response) K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000001688 213.0
YHH3_k127_4418135_2 oxidoreductase K06940 - - 0.00000000000000000000000000000000000000000000000000000008691 196.0
YHH3_k127_4418135_3 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0000000000000000000000000000000000000000002847 181.0
YHH3_k127_4418135_4 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000008111 151.0
YHH3_k127_4418135_5 - - - - 0.0000007086 54.0
YHH3_k127_4459272_0 PUA-like domain K00958 - 2.7.7.4 1.641e-199 627.0
YHH3_k127_4459272_1 TraB family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008563 417.0
YHH3_k127_4459272_10 - - - - 0.000000000612 63.0
YHH3_k127_4459272_11 Nudix N-terminal - - - 0.00000002969 55.0
YHH3_k127_4459272_12 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.0001978 53.0
YHH3_k127_4459272_2 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0004808,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0071949,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363 2.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 416.0
YHH3_k127_4459272_3 AFG1-like ATPase K06916 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 298.0
YHH3_k127_4459272_4 Histidine kinase-like ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000413 295.0
YHH3_k127_4459272_5 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000001352 223.0
YHH3_k127_4459272_6 Protoglobin K13590,K21019 - 2.7.7.65 0.000000000000000000000000000000000000000000000324 181.0
YHH3_k127_4459272_8 PilZ domain - - - 0.000000000000000000000000004147 129.0
YHH3_k127_4459272_9 YcgL domain-containing protein K09902 - - 0.000000000000000000549 89.0
YHH3_k127_4482741_0 alpha-ribazole phosphatase activity - - - 0.000000000000001044 92.0
YHH3_k127_451826_0 Transglycosylase - - - 1.74e-233 748.0
YHH3_k127_451826_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 6.594e-210 660.0
YHH3_k127_4545761_0 COG0823 Periplasmic component of the Tol biopolymer transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 437.0
YHH3_k127_4545761_1 heat shock protein binding K05801 - - 0.0000351 54.0
YHH3_k127_45551_0 protein related to plant photosystem II stability assembly factor - - - 5.968e-203 638.0
YHH3_k127_45551_1 COG1030 Membrane-bound serine protease (ClpP class) K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 570.0
YHH3_k127_45551_10 protein conserved in archaea - - - 0.00000000000000000000000000000004364 133.0
YHH3_k127_45551_11 PFAM RNA recognition motif - - - 0.0000000000000000000000001359 108.0
YHH3_k127_45551_12 domain, Protein K01219,K17624 - 3.2.1.81,3.2.1.97 0.0000005753 52.0
YHH3_k127_45551_2 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 480.0
YHH3_k127_45551_3 COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 394.0
YHH3_k127_45551_4 lipocalin K03098 GO:0005575,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033554,GO:0044462,GO:0044464,GO:0050896,GO:0051716,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000001215 220.0
YHH3_k127_45551_5 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000002444 195.0
YHH3_k127_45551_6 ybak prolyl-trna synthetase associated region K19055 - - 0.00000000000000000000000000000000000000000000000000003235 193.0
YHH3_k127_45551_7 Protein of unknown function (DUF3187) - - - 0.00000000000000000000000000000000000000000000003764 183.0
YHH3_k127_45551_8 Domain of unknown function (DUF3943) - - - 0.000000000000000000000000000000000000003848 158.0
YHH3_k127_45551_9 ThiS family K03636 - - 0.00000000000000000000000000000001123 128.0
YHH3_k127_4626351_0 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 322.0
YHH3_k127_4626351_1 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002631 250.0
YHH3_k127_4626351_2 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000000000365 219.0
YHH3_k127_4626351_4 Histidine kinase - - - 0.000000000000000000001309 105.0
YHH3_k127_4631725_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006855,GO:0006869,GO:0008144,GO:0008150,GO:0008289,GO:0008559,GO:0009987,GO:0010876,GO:0015221,GO:0015238,GO:0015399,GO:0015405,GO:0015437,GO:0015893,GO:0015920,GO:0016020,GO:0016021,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034040,GO:0034204,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0042626,GO:0042802,GO:0042908,GO:0042910,GO:0043167,GO:0043168,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0061024,GO:0065007,GO:0065008,GO:0071702,GO:0071840,GO:0071944,GO:0097035,GO:0097159,GO:0097367,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901265,GO:1901363,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 1.836e-206 659.0
YHH3_k127_4631725_1 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007455 592.0
YHH3_k127_4631725_2 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 469.0
YHH3_k127_4631725_3 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008708 399.0
YHH3_k127_4631725_4 Glycosyl transferases group 1 K02844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 361.0
YHH3_k127_4631725_5 Lipid A biosynthesis K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000003877 266.0
YHH3_k127_4631725_6 COG1519 3-deoxy-D-manno-octulosonic-acid transferase K02527 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000005257 245.0
YHH3_k127_4631725_7 domain, Protein K15125 - - 0.00000000000000000000000000000006757 131.0
YHH3_k127_4651109_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004273 384.0
YHH3_k127_4651109_1 PFAM ABC transporter related K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000002519 231.0
YHH3_k127_4651109_2 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) K01183,K13695,K19303 GO:0000270,GO:0003674,GO:0003824,GO:0004175,GO:0006022,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009254,GO:0016787,GO:0019538,GO:0030203,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901135,GO:1901564 3.2.1.14 0.00000000000000000000000000000000994 133.0
YHH3_k127_4651109_3 NUDIX domain K01515,K03574 - 3.6.1.13,3.6.1.55 0.0000000000000000000000000000401 121.0
YHH3_k127_4651109_4 ABC-type transport system, involved in lipoprotein release, permease component K02004 - - 0.0001618 50.0
YHH3_k127_4654464_0 GTP-binding protein TypA K06207 - - 4.646e-244 762.0
YHH3_k127_4654464_1 DNA helicase K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000232 265.0
YHH3_k127_4654464_2 FKBP-type peptidyl-prolyl isomerase K03773 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000003806 228.0
YHH3_k127_4692808_0 Sulfate permease family - - - 5.412e-291 914.0
YHH3_k127_4692808_1 LysR family K21703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 451.0
YHH3_k127_4692808_2 Na+-dependent bicarbonate transporter superfamily K07086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 423.0
YHH3_k127_4692808_3 BMC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 346.0
YHH3_k127_4692808_4 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001467 240.0
YHH3_k127_4692808_5 AAA domain K03496 - - 0.00000000000000000000000000000000000000000000000001028 187.0
YHH3_k127_4692808_6 Belongs to the UPF0225 family K09858 - - 0.00000000000000000000000000000000000001094 148.0
YHH3_k127_4692808_7 - - - - 0.0000000000000000000000001319 109.0
YHH3_k127_4692808_8 - - - - 0.00000000000000000000004643 111.0
YHH3_k127_4697497_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 3.147e-197 621.0
YHH3_k127_4697497_1 Anthranilate synthase component I K01657,K01665 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 498.0
YHH3_k127_4697497_2 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 343.0
YHH3_k127_4697497_3 PFAM Aminotransferase, class IV K02619 - 4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000002038 220.0
YHH3_k127_4697497_4 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000002847 155.0
YHH3_k127_4697497_5 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000000004488 135.0
YHH3_k127_470784_0 Glutathionylspermidine synthase K01460 - 3.5.1.78,6.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 606.0
YHH3_k127_470784_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 287.0
YHH3_k127_470784_2 Phospholipid N-methyltransferase K00570 - 2.1.1.17,2.1.1.71 0.00000000000000000000000000000000000001302 151.0
YHH3_k127_470784_3 - - - - 0.000000000000000000000000000000000004245 139.0
YHH3_k127_470784_4 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.00005664 49.0
YHH3_k127_4714872_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 7.799e-217 678.0
YHH3_k127_4714872_1 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 538.0
YHH3_k127_4714872_2 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 406.0
YHH3_k127_4714872_3 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 333.0
YHH3_k127_4714872_4 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007701 318.0
YHH3_k127_4714872_5 methyltransferase activity K21310 - 2.1.1.334 0.0000000000000000000000000000000000000000000000000000000402 203.0
YHH3_k127_472108_0 PFAM Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 466.0
YHH3_k127_472108_1 Tetratricopeptide repeat K02200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009026 286.0
YHH3_k127_472108_2 subunit of a heme lyase K02200 - - 0.0000000000000000000000000000000000005866 146.0
YHH3_k127_472108_3 cell redox homeostasis - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000002056 104.0
YHH3_k127_472108_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000003244 94.0
YHH3_k127_4722156_0 AAA domain - - - 1.094e-259 824.0
YHH3_k127_4722156_1 GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 428.0
YHH3_k127_4722156_10 Peptidase S24-like - - - 0.00006674 53.0
YHH3_k127_4722156_2 galactokinase activity K12446 - 2.7.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 299.0
YHH3_k127_4722156_3 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000001443 241.0
YHH3_k127_4722156_4 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.000000000000000000000000000000000000000000006665 169.0
YHH3_k127_4722156_5 Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase K07740 GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 - 0.00000000000000000000004658 104.0
YHH3_k127_4722156_6 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000002538 100.0
YHH3_k127_4722156_7 Protein of unknown function (DUF2835) - - - 0.00000000000003338 76.0
YHH3_k127_4722156_8 Sel1 domain protein repeat-containing protein K07126 - - 0.00000000000004792 78.0
YHH3_k127_4722156_9 PFAM UspA - - - 0.000001794 59.0
YHH3_k127_4830445_0 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 3.266e-221 696.0
YHH3_k127_4830445_1 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005761 489.0
YHH3_k127_4830445_10 - - - - 0.00000000000000000001907 96.0
YHH3_k127_4830445_2 PFAM Glycoside hydrolase 15-related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000464 415.0
YHH3_k127_4830445_3 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005338 343.0
YHH3_k127_4830445_4 STAS domain K03321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 370.0
YHH3_k127_4830445_5 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001511 279.0
YHH3_k127_4830445_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005495 253.0
YHH3_k127_4830445_7 TraB family K09973 - - 0.00000000000000000000000000000000000000000000002197 182.0
YHH3_k127_4830445_8 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000000006296 170.0
YHH3_k127_4830445_9 cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000000006064 184.0
YHH3_k127_4851001_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000806 609.0
YHH3_k127_4851001_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007227 312.0
YHH3_k127_4851001_2 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000004513 177.0
YHH3_k127_4851001_3 Binds directly to 16S ribosomal RNA K02968 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000005434 94.0
YHH3_k127_4954259_0 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 573.0
YHH3_k127_4954259_1 Fructosamine kinase - GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0044237 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003851 351.0
YHH3_k127_4954259_2 lytic transglycosylase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007911 265.0
YHH3_k127_4954259_3 MgtC family K07507 GO:0008150,GO:0009405,GO:0044419,GO:0051704 - 0.000000000000000000000000000000000000000000000000001297 186.0
YHH3_k127_4954259_4 Domain of unknown function (DUF1820) - - - 0.00000000000000000000000000000000000001039 147.0
YHH3_k127_4954259_5 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000001973 57.0
YHH3_k127_5060113_0 Sugar fermentation stimulation protein K06206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002549 267.0
YHH3_k127_5060113_1 Signal transduction protein - - - 0.0000000000000000000000000000000000000000000000000002637 195.0
YHH3_k127_5060113_2 Domain of Unknown Function (DUF349) - - - 0.0000000000000003463 93.0
YHH3_k127_5078811_0 Cation transport ATPase (P-type) - - - 0.0 1039.0
YHH3_k127_5078811_1 HD domain - - - 0.000000000000000000000000000002932 125.0
YHH3_k127_5098846_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 1.153e-299 925.0
YHH3_k127_5098846_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008451 575.0
YHH3_k127_5098846_2 ACT domain K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000007814 245.0
YHH3_k127_5098846_3 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000006329 145.0
YHH3_k127_5098846_4 PFAM macrophage migration inhibitory factor - - - 0.0000000000000000000000000000000006826 136.0
YHH3_k127_5098846_5 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000006437 78.0
YHH3_k127_5098846_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000006482 59.0
YHH3_k127_5172561_0 heat shock protein binding - - - 2.076e-223 713.0
YHH3_k127_5172561_1 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 564.0
YHH3_k127_5172561_2 abc transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 398.0
YHH3_k127_5172561_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001165 276.0
YHH3_k127_5172561_4 COG1994 Zn-dependent proteases - - - 0.00000000000000000000000000000000000000000000000000000000000000003856 252.0
YHH3_k127_51930_0 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 593.0
YHH3_k127_51930_1 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007258 458.0
YHH3_k127_51930_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 462.0
YHH3_k127_51930_3 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006628 334.0
YHH3_k127_51930_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000174 309.0
YHH3_k127_51930_5 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily K06968 - 2.1.1.186 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008887 282.0
YHH3_k127_51930_6 Response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009306 256.0
YHH3_k127_51930_7 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000776 118.0
YHH3_k127_5232867_0 PFAM ROK family protein K00845,K00847 - 2.7.1.2,2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000837 379.0
YHH3_k127_5232867_1 Polysaccharide chain length determinant protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000002178 258.0
YHH3_k127_5232867_2 Transposase IS116/IS110/IS902 family K07486 - - 0.0000000000000000000000000000000000000000000178 171.0
YHH3_k127_5232867_3 Kelch repeat-containing protein - - - 0.000000000000000000000000000005752 132.0
YHH3_k127_5232867_4 COG1943 Transposase and inactivated derivatives - - - 0.000000000000000000001657 100.0
YHH3_k127_5232867_5 Transposase IS200 like - - - 0.000000000000000000002795 94.0
YHH3_k127_5232867_7 Plasmid stabilization system - - - 0.000000000000000001214 89.0
YHH3_k127_5234652_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 606.0
YHH3_k127_5234652_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 553.0
YHH3_k127_5234652_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 452.0
YHH3_k127_5234652_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 402.0
YHH3_k127_5234652_4 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 395.0
YHH3_k127_5234652_5 MraW methylase family K03438 - 2.1.1.199 0.000000000000000000000000000000000002349 140.0
YHH3_k127_5234652_6 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.00000000000005093 75.0
YHH3_k127_5262176_0 xylan catabolic process K03932 - - 0.00000000000000000000000000000000000000000000000000000485 204.0
YHH3_k127_5262176_1 Phosphoglycerate mutase family - - - 0.0000000000000000000000004446 106.0
YHH3_k127_5262176_2 Winged helix-turn helix - - - 0.0000000000000004526 81.0
YHH3_k127_5262176_3 Common central domain of tyrosinase K00505 - 1.14.18.1 0.000000000000001949 91.0
YHH3_k127_5283633_0 Oxidoreductase molybdopterin binding domain - - - 0.000000000000000000000000000000000000000003018 161.0
YHH3_k127_5283633_1 Tetratricopeptide repeat - - - 0.0000001691 64.0
YHH3_k127_5317364_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 2.184e-321 994.0
YHH3_k127_5317364_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 3.208e-298 922.0
YHH3_k127_5317364_10 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002424 290.0
YHH3_k127_5317364_11 PFAM Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001248 263.0
YHH3_k127_5317364_12 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000001989 236.0
YHH3_k127_5317364_13 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000004575 186.0
YHH3_k127_5317364_14 - - - - 0.00000000000000000000000000000000000000000000006384 178.0
YHH3_k127_5317364_15 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1902494 3.1.11.6 0.0000000000000000005435 88.0
YHH3_k127_5317364_2 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.392e-290 902.0
YHH3_k127_5317364_3 Cysteine-rich domain - - - 1.485e-219 689.0
YHH3_k127_5317364_4 Type I GTP cyclohydrolase folE2 K09007 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007348 410.0
YHH3_k127_5317364_5 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 418.0
YHH3_k127_5317364_6 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 364.0
YHH3_k127_5317364_7 Protein of unknown function (DUF1588) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 393.0
YHH3_k127_5317364_8 Tryptophan 2,3-dioxygenase K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006206 304.0
YHH3_k127_5317364_9 Protein of unknown function (DUF3501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004727 282.0
YHH3_k127_5329886_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 6.946e-220 692.0
YHH3_k127_5329886_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008907 613.0
YHH3_k127_5329886_2 Dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 466.0
YHH3_k127_5329886_4 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001598 250.0
YHH3_k127_5393155_0 PFAM RNA-directed DNA polymerase (Reverse transcriptase) K00986 - 2.7.7.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 584.0
YHH3_k127_5393155_1 Rhs family - - - 0.0000000000000000000000000000000000000000212 166.0
YHH3_k127_5393155_2 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000000000002251 83.0
YHH3_k127_5393155_4 - - - - 0.000000004826 59.0
YHH3_k127_5412510_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 6.506e-222 695.0
YHH3_k127_5412510_1 PFAM metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 542.0
YHH3_k127_5412510_2 AAA domain - - - 0.000000000001583 68.0
YHH3_k127_5412510_3 Transcriptional regulator K07733 - - 0.00000000006164 65.0
YHH3_k127_5412510_4 - - - - 0.00000003128 55.0
YHH3_k127_5417752_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0 1401.0
YHH3_k127_5417752_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0042380,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046490,GO:0048037,GO:0051536,GO:0051538,GO:0051540,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 452.0
YHH3_k127_5417752_2 PFAM Glycosyl transferase family 2 K20534 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007805 280.0
YHH3_k127_5417752_3 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000217 239.0
YHH3_k127_5417752_4 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 0.000000000000000000000000000000000000000000000000000000000000000003601 234.0
YHH3_k127_5417752_5 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000000000231 201.0
YHH3_k127_5417752_6 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.000000000000000000000000000001512 126.0
YHH3_k127_5417752_7 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.00000000000000000000002128 100.0
YHH3_k127_5417752_8 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000006119 101.0
YHH3_k127_5443559_0 COG0823 Periplasmic component of the Tol biopolymer transport system - - - 4.86e-278 882.0
YHH3_k127_5443559_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004905 537.0
YHH3_k127_5443559_2 SH3 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000654 210.0
YHH3_k127_5443559_3 Concanavalin A-like lectin/glucanases superfamily - - - 0.0000000000000000000000000000000000004332 145.0
YHH3_k127_5457387_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 2.359e-311 968.0
YHH3_k127_5457387_1 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008423 513.0
YHH3_k127_5457387_2 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 392.0
YHH3_k127_5457387_3 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000505 134.0
YHH3_k127_5457387_4 Domain of unknown function (DUF4389) - - - 0.0000001656 58.0
YHH3_k127_5457387_5 Protein of unknown function (DUF2591) - - - 0.0000004957 57.0
YHH3_k127_5481411_0 Domain of unknown function (DUF4384) - - - 0.0000000000000000000309 101.0
YHH3_k127_5481411_1 transcriptional regulator, arac family - - - 0.000000000000000017 92.0
YHH3_k127_5481411_3 PFAM Cell wall hydrolase - - - 0.00000000000004449 76.0
YHH3_k127_5522906_0 DNA polymerase X family K02347 - - 2.979e-258 807.0
YHH3_k127_5522906_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 520.0
YHH3_k127_5522906_2 SMART Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006164 305.0
YHH3_k127_5522906_3 LemA family K03744 - - 0.000000000000000000000000000000000000000000004462 169.0
YHH3_k127_5522906_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000003577 139.0
YHH3_k127_5522906_5 nitric oxide dioxygenase activity - - - 0.0000000000000000000000000005433 117.0
YHH3_k127_5522906_6 Predicted membrane protein (DUF2207) - - - 0.000000000003488 68.0
YHH3_k127_5526801_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 397.0
YHH3_k127_5526801_1 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000059 325.0
YHH3_k127_5526801_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008715 315.0
YHH3_k127_5526801_3 Protein of unknown function (DUF3025) - - - 0.000000000000000000000000000000000000000000000000003933 192.0
YHH3_k127_5534837_1 BrnA antitoxin of type II toxin-antitoxin system - - - 0.0000000000000000000000000000000000000000008397 158.0
YHH3_k127_5534837_2 - - - - 0.000000000000000000000000000001806 127.0
YHH3_k127_5534837_3 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.0000000000000000005476 87.0
YHH3_k127_5534837_5 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.000005297 53.0
YHH3_k127_5546321_0 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 418.0
YHH3_k127_5546321_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003665 377.0
YHH3_k127_5546321_2 phosphate transport system permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005346 303.0
YHH3_k127_5546321_3 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000001401 93.0
YHH3_k127_5568541_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004026 504.0
YHH3_k127_5568541_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005057 423.0
YHH3_k127_5568541_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 344.0
YHH3_k127_5568541_3 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000008311 236.0
YHH3_k127_5568541_4 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000000000000000000000000000001891 218.0
YHH3_k127_5568541_5 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.000000000000000000000000000000001299 137.0
YHH3_k127_5568541_6 FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3- polyprenyl-4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin ferredoxin reductase system to COQ6 - - - 0.00000002828 60.0
YHH3_k127_5583217_0 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 2071.0
YHH3_k127_5583217_1 Pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 2.366e-253 786.0
YHH3_k127_5583217_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 563.0
YHH3_k127_5583217_3 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009321 409.0
YHH3_k127_5583217_4 Sporulation related domain K03112 - - 0.0000000034 62.0
YHH3_k127_5592202_0 Rhomboid family K19225 - 3.4.21.105 0.000000000000000000000000000000000000000000000000000000000000000000000000005475 266.0
YHH3_k127_5633237_0 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843,K19810 - 5.4.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009882 384.0
YHH3_k127_5633237_1 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 314.0
YHH3_k127_5633237_2 Elongation factor P--(R)-beta-lysine ligase K04568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 311.0
YHH3_k127_5633237_3 - - - - 0.000000000000000000001293 104.0
YHH3_k127_5670753_0 Protein of unknown function (DUF3417) K00688 - 2.4.1.1 3.1e-232 731.0
YHH3_k127_5670753_1 Sulfate permease family K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 400.0
YHH3_k127_5670753_2 Rhs family - - - 0.0000000000000000000000000000002307 138.0
YHH3_k127_5670753_3 Large exoproteins involved in heme utilization or adhesion K15125 - - 0.000000000000000000000000000008371 133.0
YHH3_k127_5670753_4 COG1943 Transposase and inactivated derivatives K07491 - - 0.0000000000001122 73.0
YHH3_k127_5695066_0 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005489 351.0
YHH3_k127_5695066_1 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 323.0
YHH3_k127_5695066_2 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00000000000000000001793 96.0
YHH3_k127_5695066_3 CsbD-like - - - 0.00000000000000000008307 89.0
YHH3_k127_5695066_4 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000002624 70.0
YHH3_k127_5704881_0 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 546.0
YHH3_k127_5704881_1 histidine kinase HAMP region domain protein K07641 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005003 471.0
YHH3_k127_5704881_2 AI-2E family transporter K03548 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 407.0
YHH3_k127_5704881_3 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 325.0
YHH3_k127_5704881_4 YmdB-like protein K09769 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008052 289.0
YHH3_k127_5704881_5 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006772 253.0
YHH3_k127_5704881_6 HD domain - - - 0.00000000000000000000000000000008493 137.0
YHH3_k127_5704881_7 Belongs to the ompA family K03640 - - 0.0000000003381 69.0
YHH3_k127_5704881_8 - - - - 0.000000004748 63.0
YHH3_k127_5704881_9 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0001147 45.0
YHH3_k127_5709348_0 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 1.925e-316 979.0
YHH3_k127_5709348_1 Periplasmic binding protein domain K11959 - - 3.497e-237 739.0
YHH3_k127_5709348_2 Branched-chain amino acid transport system / permease component K11960 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000865 414.0
YHH3_k127_5709348_3 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009211 346.0
YHH3_k127_5709348_4 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.0000000000000000000000000000000000000000000000000000000000003385 220.0
YHH3_k127_5709348_5 Urease, gamma subunit K01430 - 3.5.1.5 0.00000000000000000000000000000000000000000000000006671 178.0
YHH3_k127_5709348_6 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.0000000000000000000000000000000000000000000006195 169.0
YHH3_k127_5709348_7 Belongs to the urease beta subunit family K01429 - 3.5.1.5 0.0000000000000000000000000000000000000000000147 163.0
YHH3_k127_5726564_0 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 455.0
YHH3_k127_5726564_1 Methyltransferase type 11 K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 409.0
YHH3_k127_5726564_2 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 320.0
YHH3_k127_5726564_3 Type IV Pilus-assembly protein W K02672 - - 0.00000000000000000000000000000000001554 149.0
YHH3_k127_5726564_4 Bacterial regulatory protein, arsR family - - - 0.0000000000000000000000000001376 118.0
YHH3_k127_5726564_5 Type II transport protein GspH K08084 - - 0.00000000000000000000005153 105.0
YHH3_k127_5726564_6 - - - - 0.0000000000000000000005945 99.0
YHH3_k127_5726564_7 response regulator K07183 - - 0.0000000000000000000009911 102.0
YHH3_k127_5726564_8 Pilus assembly protein PilX - - - 0.0000001511 60.0
YHH3_k127_5726564_9 TIGRFAM type IV pilus modification protein PilV K02671 - - 0.000008985 56.0
YHH3_k127_5732484_0 Membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 584.0
YHH3_k127_5732484_1 - - - - 0.00000000000000000000000000000000000000000000000000000004664 205.0
YHH3_k127_5732484_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K03406 - - 0.0000000000000000000000000000000000000000000000000000001024 211.0
YHH3_k127_5732484_3 Protein of unknown function DUF86 - - - 0.00000000000000000000001654 109.0
YHH3_k127_5732484_4 PFAM DNA polymerase beta domain protein region K07075 - - 0.0000000000000003783 82.0
YHH3_k127_5732484_5 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.00000000003915 67.0
YHH3_k127_5732484_7 Transposase K07491 - - 0.00007244 48.0
YHH3_k127_5732484_8 Transposase K07491 - - 0.0003129 47.0
YHH3_k127_577221_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 3.638e-260 808.0
YHH3_k127_577221_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 4.389e-221 694.0
YHH3_k127_577221_10 Domain of unknown function (DUF4124) - - - 0.00000000000000005109 89.0
YHH3_k127_577221_2 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 526.0
YHH3_k127_577221_3 signal transduction histidine kinase K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 385.0
YHH3_k127_577221_4 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007472 334.0
YHH3_k127_577221_5 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004208 278.0
YHH3_k127_577221_6 Protochlamydia outer membrane protein - - - 0.00000000000000000000000000000000000000000000000003354 192.0
YHH3_k127_577221_7 - - - - 0.00000000000000000000000000000000000000000000002993 177.0
YHH3_k127_577221_8 Protochlamydia outer membrane protein - - - 0.00000000000000000000000000000000000004493 156.0
YHH3_k127_577221_9 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000000000000002244 104.0
YHH3_k127_5788893_0 sensor diguanylate cyclase phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004989 434.0
YHH3_k127_5788893_1 PFAM regulator of chromosome condensation, RCC1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004118 381.0
YHH3_k127_5788893_10 Zinc transporter zupT K07238 GO:0000041,GO:0003674,GO:0005215,GO:0005381,GO:0005384,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006824,GO:0006826,GO:0006828,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015086,GO:0015087,GO:0015093,GO:0015318,GO:0015684,GO:0015691,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0034755,GO:0044464,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070574,GO:0070838,GO:0071421,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:1903874 - 0.0006531 44.0
YHH3_k127_5788893_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 331.0
YHH3_k127_5788893_3 Bacterial extracellular solute-binding protein K11069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004786 302.0
YHH3_k127_5788893_4 Periplasmic sensor hybrid histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003074 267.0
YHH3_k127_5788893_5 Transcriptional regulator K13633 - - 0.000000000000000000000000000000000000000000000000000000000000001759 232.0
YHH3_k127_5788893_6 TIGRFAM polymorphic outer membrane protein K21449 - - 0.00000000000000000000000000000001209 143.0
YHH3_k127_5788893_7 PFAM GGDEF domain containing protein - - - 0.00000000000000004441 83.0
YHH3_k127_5788893_8 regulator of chromosome condensation, RCC1 - - - 0.00000000000002231 87.0
YHH3_k127_5788893_9 Transposase K07497 - - 0.000001029 52.0
YHH3_k127_5862654_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008442 286.0
YHH3_k127_5862654_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008599 283.0
YHH3_k127_5862654_2 Protein of unknown function (DUF1415) - - - 0.0000000000000000000000000000000000000000000000000009786 190.0
YHH3_k127_5862654_3 MOSC domain - - - 0.00000000000000000000000000000000000009448 146.0
YHH3_k127_5862654_4 Alpha-amylase domain K01176 - 3.2.1.1 0.0000001309 57.0
YHH3_k127_5862654_5 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs K05541 GO:0000049,GO:0000166,GO:0002943,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010181,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0032553,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363 - 0.000002332 52.0
YHH3_k127_5911374_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 3.187e-321 992.0
YHH3_k127_5911374_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 607.0
YHH3_k127_5911374_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 325.0
YHH3_k127_5911374_3 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 GO:0003674,GO:0003824,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042221,GO:0042364,GO:0042398,GO:0042493,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046655,GO:0046656,GO:0050896,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 328.0
YHH3_k127_5911374_4 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 299.0
YHH3_k127_5911374_5 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000004257 235.0
YHH3_k127_5911374_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000001003 235.0
YHH3_k127_5911374_7 CRS1_YhbY K07574 - - 0.000000000000000000000004041 105.0
YHH3_k127_5911374_8 Preprotein translocase subunit SecG K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000000000000000001288 106.0
YHH3_k127_5911374_9 Domain of unknown function (DUF4149) - - - 0.00000001436 58.0
YHH3_k127_5917681_0 COG0835 Chemotaxis signal transduction protein K03415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 359.0
YHH3_k127_5917681_1 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003817 284.0
YHH3_k127_5917681_2 pteridine-dependent deoxygenase K18240 - 4.1.3.40,4.1.3.45 0.00000000000000000000000000000000000000000000000000000000006541 217.0
YHH3_k127_5917681_3 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.000000000000000000000000000000000000767 149.0
YHH3_k127_5917681_4 - - - - 0.000000000000000000000000000001307 124.0
YHH3_k127_5917681_5 pilus assembly protein, PilZ - - - 0.000000000002184 76.0
YHH3_k127_5917681_6 FlgN protein K02399 - - 0.0001086 51.0
YHH3_k127_5917681_7 COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) K02398 - - 0.0007529 46.0
YHH3_k127_5924348_0 Belongs to the RimK family K05844 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016874,GO:0016879,GO:0016881,GO:0018169,GO:0018410,GO:0019538,GO:0031668,GO:0033554,GO:0036211,GO:0042802,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0070739,GO:0071496,GO:0071704,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 361.0
YHH3_k127_5924348_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 312.0
YHH3_k127_5924348_2 protein conserved in archaea - - - 0.0000000000000000000000000000000000000000000000001766 180.0
YHH3_k127_5931838_0 Protein of unknown function (DUF1722) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000543 295.0
YHH3_k127_5931838_1 PFAM regulatory protein, MerR K22491 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005123 277.0
YHH3_k127_5931838_2 PilZ domain K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000008597 234.0
YHH3_k127_5931838_3 Belongs to the glutathione peroxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000002024 229.0
YHH3_k127_5931838_4 PFAM response regulator receiver - - - 0.00000000000000000000000000008182 120.0
YHH3_k127_5931838_5 FAD binding domain of DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000048 103.0
YHH3_k127_5947832_0 Peptidoglycan-binding domain 1 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 438.0
YHH3_k127_5947832_1 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000001572 222.0
YHH3_k127_5947832_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000003056 119.0
YHH3_k127_5947832_3 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000000000823 91.0
YHH3_k127_5971489_1 PilZ domain K03406 - - 0.0000000000000000000000000000000002354 141.0
YHH3_k127_5971489_2 - - - - 0.000000000000001096 81.0
YHH3_k127_599848_0 DNA segregation ATPase FtsK SpoIIIE K03466 - - 2.947e-284 891.0
YHH3_k127_599848_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005014 296.0
YHH3_k127_599848_2 AAA ATPase, central domain protein K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001236 243.0
YHH3_k127_599848_3 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000000000000000000000001012 184.0
YHH3_k127_6006318_0 PFAM Metal-dependent hydrolase HDOD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005923 284.0
YHH3_k127_6006318_1 response regulator receiver K13041 - - 0.000000000000000000000000000000000000000000003867 173.0
YHH3_k127_6006318_2 HDOD domain - - - 0.000000000000005737 79.0
YHH3_k127_6016735_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.711e-275 854.0
YHH3_k127_6016735_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.116e-241 752.0
YHH3_k127_6016735_10 Ribonucleotide reductase, barrel domain K00525 - 1.17.4.1 0.000000002702 59.0
YHH3_k127_6016735_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005031 452.0
YHH3_k127_6016735_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005988 439.0
YHH3_k127_6016735_4 GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 332.0
YHH3_k127_6016735_5 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004477 268.0
YHH3_k127_6016735_6 Spondin_N - - - 0.000000000000000000000000000000000000000000000000001586 191.0
YHH3_k127_6016735_7 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.00000000000000000000000000000000000000000000000001483 189.0
YHH3_k127_6016735_8 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 GO:0002097,GO:0002100,GO:0003674,GO:0003824,GO:0004000,GO:0005488,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008251,GO:0008270,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0046914,GO:0052717,GO:0071704,GO:0090304,GO:1901360 3.5.4.33 0.00000000000000000000000000000000000000000000000002034 183.0
YHH3_k127_6016735_9 protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000000000005291 141.0
YHH3_k127_6061005_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 GO:0000027,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0022613,GO:0022618,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032794,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0043021,GO:0043022,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005352 556.0
YHH3_k127_6061005_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 341.0
YHH3_k127_6061005_2 Protein of unknown function (DUF3570) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009686 314.0
YHH3_k127_6061005_3 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002755 250.0
YHH3_k127_6061005_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0008152,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0016491,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0042802,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0055114,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.0000000000000000000000000000000000000000001986 164.0
YHH3_k127_6061005_5 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000003917 160.0
YHH3_k127_6061005_6 Domain of unknown function (DUF4266) - - - 0.0000000000000001579 81.0
YHH3_k127_6077312_0 COG2829 Outer membrane phospholipase A K01058 GO:0003674,GO:0003824,GO:0004620,GO:0004623,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005623,GO:0008970,GO:0009279,GO:0016020,GO:0016021,GO:0016298,GO:0016787,GO:0016788,GO:0019867,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031975,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044425,GO:0044462,GO:0044464,GO:0045203,GO:0046872,GO:0046983,GO:0052689,GO:0071944 3.1.1.32,3.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000005939 261.0
YHH3_k127_6077312_1 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000004447 213.0
YHH3_k127_6077312_10 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.0000000665 62.0
YHH3_k127_6077312_11 COG2010 Cytochrome c, mono- and diheme variants - - - 0.0000001996 53.0
YHH3_k127_6077312_12 Transposase - - - 0.000001558 55.0
YHH3_k127_6077312_2 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000004471 195.0
YHH3_k127_6077312_3 Putative transposase - - - 0.0000000000000000000000000000000000000000000000002389 184.0
YHH3_k127_6077312_4 IS66 Orf2 like protein K07484 - - 0.0000000000000000000000000000005565 125.0
YHH3_k127_6077312_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000003818 113.0
YHH3_k127_6077312_6 Putative transposase - - - 0.0000000000000000000001643 100.0
YHH3_k127_6077312_7 - - - - 0.000000000000000000001925 96.0
YHH3_k127_6077312_8 Histidine kinase - - - 0.000000000000001569 78.0
YHH3_k127_6077312_9 Universal stress protein family - - - 0.00000000004488 68.0
YHH3_k127_6099802_0 COG0475 Kef-type K transport systems, membrane components K11745 - - 8.678e-199 636.0
YHH3_k127_6099802_1 Flavodoxin-like fold K11748 - - 0.000000000000000000000000000000000000000000000000000000000000001054 224.0
YHH3_k127_6099802_2 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.0000000000000000000000000000000000000000000004001 168.0
YHH3_k127_6099802_3 Lactonase, 7-bladed beta-propeller - - - 0.000000000000000000000000000000000000000000003909 185.0
YHH3_k127_6099802_4 Domain of unknown function (DUF4336) - - - 0.0000000000000000000000000000000000000006013 154.0
YHH3_k127_6099802_5 Belongs to the UPF0178 family K09768 - - 0.000000000000000000000000000000003021 130.0
YHH3_k127_6099802_6 Putative quorum-sensing-regulated virulence factor K09954 - - 0.000000000000000000000000003401 113.0
YHH3_k127_6155683_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 386.0
YHH3_k127_6155683_1 PFAM AsmA family K07289 - - 0.0000000000000000000000000000000000000000000000000000000001049 221.0
YHH3_k127_6155683_2 Protein required for attachment to host cells - - - 0.0000000000000000000000000000001221 129.0
YHH3_k127_6155683_3 PFAM binding-protein-dependent transport systems inner membrane component K02038 - - 0.000000000000000000006551 93.0
YHH3_k127_6155683_4 - - - - 0.000008384 54.0
YHH3_k127_6166175_0 Domain of unknown function (DUF1974) K06445 - - 2.38e-303 951.0
YHH3_k127_6166175_1 PFAM 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 3.176e-235 745.0
YHH3_k127_6166175_10 PFAM 20S proteasome, A and B subunits K07395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005087 314.0
YHH3_k127_6166175_11 PFAM Short-chain dehydrogenase reductase SDR K03793 - 1.5.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004858 291.0
YHH3_k127_6166175_12 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003997 278.0
YHH3_k127_6166175_13 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000003292 239.0
YHH3_k127_6166175_14 involved in chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000000000000000000000001233 226.0
YHH3_k127_6166175_15 - - - - 0.00000000000000000000000000000000000000000000000000000000008494 212.0
YHH3_k127_6166175_16 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000000000000000000000000000004198 187.0
YHH3_k127_6166175_17 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000008632 183.0
YHH3_k127_6166175_18 Thioesterase superfamily K10806 - - 0.0000000000000000000000000000000000000000000004123 169.0
YHH3_k127_6166175_19 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.000000000000000000000000000000000000000001113 161.0
YHH3_k127_6166175_2 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 6.602e-219 694.0
YHH3_k127_6166175_20 Patatin-like phospholipase K07001 GO:0003674,GO:0003824,GO:0016787 - 0.000000000000000000000000000005902 124.0
YHH3_k127_6166175_21 Protein of unknown function (DUF1499) - - - 0.000000000000000000000000000038 122.0
YHH3_k127_6166175_22 Protein involved in outer membrane biogenesis - - - 0.00000000000000000007048 106.0
YHH3_k127_6166175_23 Outer membrane protein beta-barrel domain - - - 0.0000000000000003895 85.0
YHH3_k127_6166175_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 597.0
YHH3_k127_6166175_4 Domain of unknown function (DUF697) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 503.0
YHH3_k127_6166175_5 50S ribosome-binding GTPase K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005052 400.0
YHH3_k127_6166175_6 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 381.0
YHH3_k127_6166175_7 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 366.0
YHH3_k127_6166175_8 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 349.0
YHH3_k127_6166175_9 Circularly permuted ATP-grasp type 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 340.0
YHH3_k127_6224845_0 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 391.0
YHH3_k127_6224845_1 Belongs to the 'phage' integrase family. XerC subfamily K03733 GO:0000150,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008907,GO:0009009,GO:0009037,GO:0009987,GO:0015074,GO:0032991,GO:0034641,GO:0042150,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0071139,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 330.0
YHH3_k127_6224845_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000006954 212.0
YHH3_k127_6224845_3 cation diffusion facilitator family transporter K16264 - - 0.000000000000000000000000000000000000000000000000000000007789 203.0
YHH3_k127_6224845_4 Protein of unknown function, DUF484 K09921 - - 0.00000000000000000000000000000000000000132 157.0
YHH3_k127_6224845_5 cation diffusion facilitator family transporter K16264 - - 0.000000000000000000000000000000000005383 141.0
YHH3_k127_6224845_6 Prokaryotic dksA/traR C4-type zinc finger - - - 0.000000000000000000000000000003651 124.0
YHH3_k127_6224845_7 Rhodanese Homology Domain - - - 0.00000000000000000000000000005412 122.0
YHH3_k127_6250010_0 Amino acid adenylation domain K02364 - 6.3.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 398.0
YHH3_k127_6250010_1 Membrane protein involved in D-alanine export - - - 0.00000000000000000000000000000000000000000000000000000000000000000002681 250.0
YHH3_k127_6250010_2 glycerophosphodiester phosphodiesterase activity K01126 - 3.1.4.46 0.00000000000000000000000000000001642 144.0
YHH3_k127_6250010_3 Phosphopantetheine attachment site - - - 0.000001007 54.0
YHH3_k127_6257040_0 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002015 297.0
YHH3_k127_6257040_1 PFAM glucosamine galactosamine-6-phosphate isomerase K01057 - 3.1.1.31 0.000000000000000000000000000000000000000000000000004924 190.0
YHH3_k127_6257040_2 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.000000000000000000000000000014 127.0
YHH3_k127_6257040_3 protein conserved in bacteria K09908 - - 0.00000000002629 70.0
YHH3_k127_6257040_4 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000005139 57.0
YHH3_k127_6273208_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 559.0
YHH3_k127_6273208_1 Adenylate cyclase K05851 GO:0003674,GO:0003824,GO:0004016,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006171,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009975,GO:0009987,GO:0016829,GO:0016849,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046058,GO:0046390,GO:0046483,GO:0052652,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000357 427.0
YHH3_k127_6273208_2 Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000546 239.0
YHH3_k127_6273208_3 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000004628 232.0
YHH3_k127_6273208_4 Universal stress protein family K06149 - - 0.000000000000000000000000743 113.0
YHH3_k127_629672_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004804 434.0
YHH3_k127_629672_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 GO:0003674,GO:0003824,GO:0008113,GO:0008150,GO:0008152,GO:0009405,GO:0016491,GO:0016667,GO:0016671,GO:0044419,GO:0051704,GO:0055114 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000008862 235.0
YHH3_k127_629672_2 Helix-turn-helix type 11 - - - 0.000000000000000000000000000000000000000000000000000000000131 212.0
YHH3_k127_629672_3 involved in chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000003007 179.0
YHH3_k127_629672_4 Bacterial-like globin K06886 - - 0.0000000000000000000000000000000000000000000002628 171.0
YHH3_k127_629672_5 COG2940 Proteins containing SET domain K07117 - - 0.000000000000000000000000001926 117.0
YHH3_k127_629672_6 PFAM Cyclic nucleotide-binding - - - 0.000000000000000000002583 98.0
YHH3_k127_6331167_0 PFAM Glucose Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007015 368.0
YHH3_k127_6331167_1 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004532,GO:0004536,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008297,GO:0008310,GO:0008408,GO:0008946,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0016896,GO:0019439,GO:0034611,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001792 272.0
YHH3_k127_6331167_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009827 263.0
YHH3_k127_6331167_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000001324 246.0
YHH3_k127_6331167_4 Rrf2 family transcriptional regulator K13771 - - 0.0000000000000000000000000000000000000000000006195 169.0
YHH3_k127_6331167_5 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000001354 149.0
YHH3_k127_6331167_7 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.000000000009222 65.0
YHH3_k127_6331167_8 Cytochrome c - - - 0.00000000001528 68.0
YHH3_k127_6344601_0 TrkA-C domain - - - 6.031e-216 691.0
YHH3_k127_6344601_1 amino acid adenylation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003357 368.0
YHH3_k127_6344601_10 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000188 61.0
YHH3_k127_6344601_2 Periplasmic binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001605 276.0
YHH3_k127_6344601_3 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003547 281.0
YHH3_k127_6344601_4 SMART cyclic nucleotide-binding K10914 - - 0.00000000000000000000000000000000000000000000000000000000000000001377 233.0
YHH3_k127_6344601_5 Protein of unknown function (DUF1461) - - - 0.00000000000000000000000000000000000000000000000000000002607 205.0
YHH3_k127_6344601_6 PFAM protein phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000004161 173.0
YHH3_k127_6344601_7 Asp/Glu/Hydantoin racemase - - - 0.00000000000000000000000000000004893 133.0
YHH3_k127_6344601_8 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000531 113.0
YHH3_k127_6344601_9 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000004614 84.0
YHH3_k127_6362922_0 response regulator K20977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004576 535.0
YHH3_k127_6362922_1 Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003531 252.0
YHH3_k127_6362922_2 cytochrome c biogenesis protein K07399 - - 0.00000000000000000000000000000000000000000000000000000000001294 216.0
YHH3_k127_6362922_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000004042 133.0
YHH3_k127_6362922_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000006634 132.0
YHH3_k127_6362922_5 Oxygen tolerance - - - 0.0000000000000006459 91.0
YHH3_k127_6399426_0 GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008472 533.0
YHH3_k127_6399426_1 Fumarase C C-terminus K01744 - 4.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008536 306.0
YHH3_k127_6399426_2 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 293.0
YHH3_k127_6399426_3 PFAM Lytic transglycosylase catalytic - - - 0.0000000000000000000000000000000000000000000000000000000000000000002957 234.0
YHH3_k127_6399426_4 Belongs to the UPF0502 family K09915 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000008516 177.0
YHH3_k127_6399426_5 Thioredoxin-like - - - 0.00000000000000000000000000000000000003134 149.0
YHH3_k127_6399426_6 acylphosphatase K01512 - 3.6.1.7 0.00000000000000000000005627 102.0
YHH3_k127_6399426_7 Phage integrase family - - - 0.00005047 47.0
YHH3_k127_6401100_0 Belongs to the GcvT family K06980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008396 325.0
YHH3_k127_6401100_1 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001774 268.0
YHH3_k127_6401100_2 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001188 231.0
YHH3_k127_6401100_3 TIGRFAM Succinate dehydrogenase, cytochrome b556 subunit K00241 - - 0.00000000000000000000000000003213 120.0
YHH3_k127_6401100_4 Succinate dehydrogenase hydrophobic membrane anchor K00242 - - 0.0000000000000001344 85.0
YHH3_k127_6429807_0 aminotransferase class I and II K14261 - - 6.216e-218 680.0
YHH3_k127_6429807_1 homoserine dehydrogenase K00003 - 1.1.1.3 1.285e-205 648.0
YHH3_k127_6429807_2 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 582.0
YHH3_k127_6429807_3 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70 sigma32) K03087 GO:0000988,GO:0000990,GO:0001000,GO:0001121,GO:0001123,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043175,GO:0043254,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 380.0
YHH3_k127_6429807_4 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000001234 145.0
YHH3_k127_6429807_5 peptidase K06194 - - 0.000000000000000000000002002 104.0
YHH3_k127_6429807_6 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000009039 106.0
YHH3_k127_6429807_7 COG0739 Membrane proteins related to metalloendopeptidases K06194,K12943 GO:0000920,GO:0001896,GO:0008150,GO:0008219,GO:0009987,GO:0012501,GO:0051301 - 0.000001888 50.0
YHH3_k127_6436034_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1065.0
YHH3_k127_6436034_1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004824 584.0
YHH3_k127_6436034_2 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 524.0
YHH3_k127_6485282_0 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 370.0
YHH3_k127_6485282_1 Thiamine monophosphate synthase K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 305.0
YHH3_k127_6485282_2 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007326 259.0
YHH3_k127_6485282_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000000000000161 209.0
YHH3_k127_6485282_4 PFAM pyridoxamine 5'-phosphate oxidase-related, FMN-binding K07226 - - 0.00000000000000000002404 97.0
YHH3_k127_6485282_5 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 GO:0003674,GO:0004857,GO:0005488,GO:0008150,GO:0008270,GO:0008657,GO:0010911,GO:0030234,GO:0032780,GO:0042030,GO:0043086,GO:0043167,GO:0043169,GO:0043462,GO:0044092,GO:0046872,GO:0046914,GO:0050790,GO:0051336,GO:0051346,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0072586,GO:0098772,GO:2000371,GO:2000372 - 0.0000000000000000009435 88.0
YHH3_k127_6485282_6 YfaZ precursor - - - 0.00000000005378 67.0
YHH3_k127_6485282_7 PFAM Bacterial type II secretion system protein F domain K02653 - - 0.00000002101 55.0
YHH3_k127_6503326_0 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 554.0
YHH3_k127_6503326_1 histidine kinase HAMP region domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004505 321.0
YHH3_k127_6503326_2 cellulase activity - - - 0.0000000000000000000000000000000000000000000000006058 192.0
YHH3_k127_6503326_3 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000000002613 121.0
YHH3_k127_6503326_4 Phenazine biosynthesis-like protein - - - 0.000000000000000000000004597 105.0
YHH3_k127_6503326_5 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000002643 96.0
YHH3_k127_6503326_6 Phenazine biosynthesis protein - - - 0.00000000000000000001925 91.0
YHH3_k127_6503326_7 Phenazine biosynthesis-like protein - - - 0.000000000001977 67.0
YHH3_k127_6503326_8 DsrE/DsrF-like family K09004 - - 0.0005295 51.0
YHH3_k127_6515455_0 Domain of unknown function (DUF4331) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 579.0
YHH3_k127_6515455_1 ECF sigma factor K03088 - - 0.000000000000000000000000000000000000001675 156.0
YHH3_k127_6515455_2 FG-GAP repeat protein - - - 0.00000000000000002744 96.0
YHH3_k127_6515455_3 ChrR Cupin-like domain - - - 0.000000000000001889 83.0
YHH3_k127_651864_0 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005224 464.0
YHH3_k127_651864_1 PFAM carbohydrate kinase K00854 - 2.7.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 440.0
YHH3_k127_651864_2 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000000000000000000000001425 235.0
YHH3_k127_651864_3 High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway K06203 GO:0000096,GO:0000097,GO:0000103,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006520,GO:0006534,GO:0006790,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0008150,GO:0008152,GO:0008271,GO:0008272,GO:0008324,GO:0008509,GO:0008512,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009675,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015103,GO:0015116,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015296,GO:0015318,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0016053,GO:0019344,GO:0019752,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044425,GO:0044459,GO:0044464,GO:0046394,GO:0051179,GO:0051234,GO:0055085,GO:0071704,GO:0071944,GO:0072348,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901682,GO:1902358,GO:1902600 - 0.0000000000000000000000000000000000000000002035 164.0
YHH3_k127_6565162_0 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 357.0
YHH3_k127_6565162_1 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000107 255.0
YHH3_k127_6565162_10 SpoVT / AbrB like domain - - - 0.00000002863 58.0
YHH3_k127_6565162_12 Putative transposase - - - 0.0001273 45.0
YHH3_k127_6565162_2 Domain of unknown function (DUF4172) - - - 0.0000000000000000000000000000000000000008395 151.0
YHH3_k127_6565162_3 Belongs to the RelE toxin family K19092 - - 0.00000000000000000000000000002793 119.0
YHH3_k127_6565162_4 PFAM cytochrome c class I K08738 - - 0.00000000000000000000000005126 110.0
YHH3_k127_6565162_5 Rhs Family K20276 - - 0.000000000000000000000001631 114.0
YHH3_k127_6565162_6 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.00000000000000000008993 90.0
YHH3_k127_6565162_7 transcriptional regulators containing the CopG Arc MetJ DNA-binding domain K07746 - - 0.000000000000000001951 87.0
YHH3_k127_6565162_8 - - - - 0.00000000000008104 78.0
YHH3_k127_6565162_9 - - - - 0.0000000002721 69.0
YHH3_k127_66568_0 Ammonium Transporter K03320 - - 1.739e-197 623.0
YHH3_k127_66568_1 PFAM Magnesium chelatase, ChlI subunit K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 597.0
YHH3_k127_66568_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004239 409.0
YHH3_k127_66568_3 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009999 397.0
YHH3_k127_66568_4 Belongs to the P(II) protein family K04752 - - 0.0000000000000000000000000000000000000000000000000000000006416 204.0
YHH3_k127_66568_5 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.000000000000000000000000000000000000003874 148.0
YHH3_k127_66568_6 Iron-binding zinc finger CDGSH type - - - 0.00000000000000000000000000000008362 125.0
YHH3_k127_66568_7 Membrane fusogenic activity K09806 - - 0.00000000000000000232 88.0
YHH3_k127_66568_8 Cytochrome P460 - - - 0.0000000000000009667 78.0
YHH3_k127_66568_9 Domain of unknown function (DUF4124) - - - 0.000000000009475 72.0
YHH3_k127_6671326_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 1.31e-198 629.0
YHH3_k127_6671326_1 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005522 551.0
YHH3_k127_6671326_2 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.0000000000000000000000000000000000000000001257 163.0
YHH3_k127_6671326_3 Domain of unknown function (DUF5062) - - - 0.000000000000000000000000000003674 121.0
YHH3_k127_6671326_5 HlyD family secretion protein K02022 - - 0.000952 47.0
YHH3_k127_6704243_0 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 442.0
YHH3_k127_6704243_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 343.0
YHH3_k127_6704243_2 2OG-Fe(II) oxygenase - - - 0.000000000000000000000000000000000000000000000000000000000008929 213.0
YHH3_k127_6704243_3 DNA repair photolyase - - - 0.0000000000000000000000000000000004242 134.0
YHH3_k127_6707819_0 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 5.424e-202 635.0
YHH3_k127_6707819_1 Peptidogalycan biosysnthesis/recognition K09919 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 359.0
YHH3_k127_6707819_10 PilZ domain - - - 0.000000001039 66.0
YHH3_k127_6707819_2 Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system K09817 GO:0000041,GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005385,GO:0005488,GO:0005524,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008144,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043492,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0072509,GO:0072511,GO:0097159,GO:0097367,GO:0098655,GO:0098660,GO:0098662,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 326.0
YHH3_k127_6707819_3 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 295.0
YHH3_k127_6707819_4 COG4531 ABC-type Zn2 transport system, periplasmic component surface adhesin K09815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006937 280.0
YHH3_k127_6707819_5 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003814 263.0
YHH3_k127_6707819_6 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000002239 251.0
YHH3_k127_6707819_7 COG1108 ABC-type Mn2 Zn2 transport systems, permease components K02075,K09816 - - 0.0000000000000000000000000000000000000000000000000000000000000000008653 239.0
YHH3_k127_6707819_8 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000000000000006366 145.0
YHH3_k127_6707819_9 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 GO:0000166,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.000000000000000000000000000000000138 133.0
YHH3_k127_6713582_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 4.805e-218 686.0
YHH3_k127_6713582_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 456.0
YHH3_k127_6713582_10 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000004369 184.0
YHH3_k127_6713582_11 pathogenesis - - - 0.00000000000000000000000000000000000000000001165 172.0
YHH3_k127_6713582_12 4Fe-4S ferredoxin iron-sulfur binding domain protein K11473 - - 0.0000000000000000000000000000000000000000001295 168.0
YHH3_k127_6713582_2 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 GO:0003674,GO:0003824,GO:0004014,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 4.1.1.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 425.0
YHH3_k127_6713582_3 Belongs to the TrpC family K01609 - 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005033 338.0
YHH3_k127_6713582_4 COG0512 Anthranilate para-aminobenzoate synthases component II K01658,K01664 GO:0000162,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006575,GO:0006576,GO:0006586,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009108,GO:0009308,GO:0009309,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042398,GO:0042401,GO:0042430,GO:0042435,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 2.6.1.85,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006142 320.0
YHH3_k127_6713582_5 HAD-hyrolase-like K01091 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0031404,GO:0033554,GO:0034641,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 319.0
YHH3_k127_6713582_6 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 303.0
YHH3_k127_6713582_7 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000003333 257.0
YHH3_k127_6713582_8 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002121 250.0
YHH3_k127_6713582_9 OsmC-like protein K07397 - - 0.00000000000000000000000000000000000000000000000000000000000000003712 226.0
YHH3_k127_6763917_0 COG0643 Chemotaxis protein histidine kinase and related kinases K03407 GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006935,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009892,GO:0009893,GO:0009987,GO:0010562,GO:0010604,GO:0010605,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019220,GO:0019222,GO:0019538,GO:0023014,GO:0023052,GO:0031323,GO:0031324,GO:0031325,GO:0031399,GO:0031400,GO:0031401,GO:0032101,GO:0032268,GO:0032269,GO:0032270,GO:0032879,GO:0032991,GO:0035303,GO:0035304,GO:0035306,GO:0035307,GO:0035556,GO:0036211,GO:0040011,GO:0040012,GO:0042221,GO:0042330,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045937,GO:0046777,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0050920,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051248,GO:0051270,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0098561,GO:0140096,GO:1901564,GO:1901873,GO:1901875,GO:1902021,GO:2000145 2.7.13.3 2.324e-228 726.0
YHH3_k127_6763917_1 TIGRFAM ATPase, FliI YscN family K02412 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003499 486.0
YHH3_k127_6763917_2 Methyl-accepting chemotaxis K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 395.0
YHH3_k127_6763917_3 Two component signalling adaptor domain - - - 0.000000000000000000000000000000000000000000000000000000000000108 216.0
YHH3_k127_6763917_4 Response regulator receiver K03413 - - 0.000000000000000000000000000000000000000000000000000000004755 200.0
YHH3_k127_6763917_5 flagellar K02413 - - 0.00000000004749 69.0
YHH3_k127_6763917_6 STAS domain - - - 0.000000003826 63.0
YHH3_k127_6792459_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 604.0
YHH3_k127_6792459_1 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005159 515.0
YHH3_k127_6792459_10 2OG-Fe(II) oxygenase K07394 - - 0.0000000000000000000000000000000000000000000000000000026 198.0
YHH3_k127_6792459_11 COG2863 Cytochrome c553 - - - 0.000000000000000000000000000000000000000000002067 171.0
YHH3_k127_6792459_12 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03214 - - 0.00000000000000000000000000000000000000000001152 173.0
YHH3_k127_6792459_13 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.0000000000000000000000008831 106.0
YHH3_k127_6792459_14 Na driven multidrug efflux pump - - - 0.000000000000008303 78.0
YHH3_k127_6792459_2 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase K03606 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005393 505.0
YHH3_k127_6792459_3 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000814 468.0
YHH3_k127_6792459_4 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 461.0
YHH3_k127_6792459_5 ABC transporter K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005611 445.0
YHH3_k127_6792459_6 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065,K13252 - 2.1.3.3,2.1.3.6,2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 427.0
YHH3_k127_6792459_7 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 293.0
YHH3_k127_6792459_8 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000000000000000000000000000000000000000006877 255.0
YHH3_k127_6792459_9 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000006854 214.0
YHH3_k127_6806975_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1644.0
YHH3_k127_6806975_1 phosphate starvation-inducible protein PhoH K07175 - - 7.644e-205 647.0
YHH3_k127_6806975_10 PFAM Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000001074 167.0
YHH3_k127_6806975_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 419.0
YHH3_k127_6806975_3 cobalamin biosynthetic process K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006455 400.0
YHH3_k127_6806975_4 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 353.0
YHH3_k127_6806975_5 ACT domain K03567 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000484 249.0
YHH3_k127_6806975_6 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000007372 212.0
YHH3_k127_6806975_7 Redoxin K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000003456 209.0
YHH3_k127_6806975_8 NlpB/DapX lipoprotein K07287 - - 0.000000000000000000000000000000000000000000000000000000005838 213.0
YHH3_k127_6806975_9 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K03796 - - 0.000000000000000000000000000000000000000000000000004117 195.0
YHH3_k127_6838239_0 Mo-co oxidoreductase dimerisation domain K17225 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 522.0
YHH3_k127_6838239_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07715 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007636 463.0
YHH3_k127_6838239_10 protein-(glutamine-N5) methyltransferase activity K02493,K07566 - 2.1.1.297,2.7.7.87 0.000000000000000002321 94.0
YHH3_k127_6838239_11 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 0.00006381 46.0
YHH3_k127_6838239_2 COG0303 Molybdopterin biosynthesis enzyme K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005752 387.0
YHH3_k127_6838239_3 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009177 386.0
YHH3_k127_6838239_4 ABC-type molybdate transport system, permease component K02018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 294.0
YHH3_k127_6838239_5 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000175 267.0
YHH3_k127_6838239_6 May be involved in the biosynthesis of molybdopterin K03638,K03831 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000000000000000000000000004349 258.0
YHH3_k127_6838239_7 SMART extracellular solute-binding protein family 3 K02051 - - 0.000000000000000000000000000000000000000000000000000000000000001168 231.0
YHH3_k127_6838239_8 molybdenum ABC transporter, periplasmic K02020 - - 0.00000000000000000000000000000000000000000000000000000000000007013 221.0
YHH3_k127_6838239_9 PFAM EamA-like transporter family - - - 0.00000000000000000000000000000000000000000009976 171.0
YHH3_k127_6867550_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1008.0
YHH3_k127_6867550_1 Part of a membrane complex involved in electron transport K03615 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 592.0
YHH3_k127_6867550_2 Part of a membrane complex involved in electron transport K03614 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 401.0
YHH3_k127_6867550_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003486 330.0
YHH3_k127_6867550_4 Part of a membrane complex involved in electron transport K03617 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 310.0
YHH3_k127_6867550_5 Part of a membrane complex involved in electron transport K03613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 293.0
YHH3_k127_6867550_6 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001811 282.0
YHH3_k127_6867550_7 Part of a membrane complex involved in electron transport K03612 - - 0.0000000000000000000000000000000000000000000000000000000000000000001457 236.0
YHH3_k127_6867550_8 Domain of unknown function (DUF1841) - - - 0.0000000000000000000000000000000000000000000000003482 179.0
YHH3_k127_6867550_9 HD domain - - - 0.00000000002169 72.0
YHH3_k127_6896600_0 Caspase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004465 319.0
YHH3_k127_6896600_1 protein conserved in bacteria K09860 - - 0.00005042 55.0
YHH3_k127_6901838_0 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004651 541.0
YHH3_k127_6901838_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 361.0
YHH3_k127_6901838_2 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.000000000000000000000000000000000000000000000000000000000393 211.0
YHH3_k127_6901838_3 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000003473 162.0
YHH3_k127_6901838_4 response regulator - - - 0.000000000000004669 83.0
YHH3_k127_69122_0 PFAM von Willebrand factor type A - - - 0.0 1242.0
YHH3_k127_69122_1 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 2.85e-299 920.0
YHH3_k127_69122_10 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000000000003596 192.0
YHH3_k127_69122_11 PAS fold - - - 0.00000000000000000000000000000000000000000001731 175.0
YHH3_k127_69122_12 PFAM RNP-1 like RNA-binding protein - - - 0.000000000000000000000000000001617 122.0
YHH3_k127_69122_13 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.000000000000000000000004082 104.0
YHH3_k127_69122_14 Protein of unknown function (DUF2914) - - - 0.000000000000000000000617 108.0
YHH3_k127_69122_15 Copper binding periplasmic protein CusF - - - 0.00000000000002991 76.0
YHH3_k127_69122_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 8.402e-243 765.0
YHH3_k127_69122_3 ATPase associated with various cellular activities, AAA_5 K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 484.0
YHH3_k127_69122_4 Belongs to the ParA family K03609 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 406.0
YHH3_k127_69122_5 Transcriptional regulator K21703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007699 374.0
YHH3_k127_69122_6 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000001067 271.0
YHH3_k127_69122_7 PFAM Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.00000000000000000000000000000000000000000000000000000000000002294 215.0
YHH3_k127_69122_8 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.00000000000000000000000000000000000000000000000000001705 199.0
YHH3_k127_69122_9 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000002877 201.0
YHH3_k127_6918616_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1042.0
YHH3_k127_6918616_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 1.125e-310 965.0
YHH3_k127_6918616_2 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 430.0
YHH3_k127_6918616_3 Cation transport ATPase (P-type) K01537 - 3.6.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 374.0
YHH3_k127_6918616_4 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 361.0
YHH3_k127_6918616_5 Response regulator receiver K03413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009736 265.0
YHH3_k127_6918616_6 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000003091 218.0
YHH3_k127_6918616_7 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016071,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031123,GO:0031124,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000007313 128.0
YHH3_k127_6918616_8 Protein of unknown function (DUF3579) - - - 0.000000000000000000000000121 109.0
YHH3_k127_6918616_9 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.000000000101 65.0
YHH3_k127_6954455_0 Sigma factor PP2C-like phosphatases K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004976 490.0
YHH3_k127_6954455_1 ATPases associated with a variety of cellular activities K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 371.0
YHH3_k127_6954455_2 Permease MlaE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006199 310.0
YHH3_k127_6954455_3 Sigma factor PP2C-like phosphatases - - - 0.0000000000000000000000000000003611 126.0
YHH3_k127_6954455_4 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000000000000000003215 118.0
YHH3_k127_6954455_5 PFAM Stage II sporulation protein E (SpoIIE) K07315 - 3.1.3.3 0.0000000000001316 74.0
YHH3_k127_6954455_6 MlaD protein K02067 - - 0.0000009868 53.0
YHH3_k127_6966071_0 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 2.178e-258 815.0
YHH3_k127_6966071_1 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000006532 199.0
YHH3_k127_6966071_2 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000002032 79.0
YHH3_k127_7027894_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 1.092e-218 691.0
YHH3_k127_7027894_1 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007321 308.0
YHH3_k127_7027894_2 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000002549 199.0
YHH3_k127_7027894_3 Formyl transferase K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000009057 197.0
YHH3_k127_7027894_4 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000002972 190.0
YHH3_k127_7049216_0 AAA domain K07133 - - 3.081e-209 657.0
YHH3_k127_7049216_1 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005751 559.0
YHH3_k127_7049216_2 TRANSCRIPTIONal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005394 261.0
YHH3_k127_7049216_3 - - - - 0.0000000000000000000000000000000000000000000004735 169.0
YHH3_k127_7049216_4 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000002137 161.0
YHH3_k127_7049216_5 - - - - 0.0000000000000000000000000000000000007915 141.0
YHH3_k127_7049216_6 PFAM Cupin - - - 0.00000000000000000000000000007267 119.0
YHH3_k127_7049216_7 Multidrug MFS transporter - - - 0.0000000000000000005251 89.0
YHH3_k127_7049216_8 Domain of unknown function (DUF4143) K07133 - - 0.000000000006282 67.0
YHH3_k127_7059982_0 ABC transporter K06158 - - 1.066e-222 704.0
YHH3_k127_7059982_1 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004439 375.0
YHH3_k127_7059982_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000007756 234.0
YHH3_k127_7059982_3 PFAM BLUF domain protein - - - 0.000000000000001849 81.0
YHH3_k127_7059982_4 Putative prokaryotic signal transducing protein - - - 0.00000000000002379 76.0
YHH3_k127_7073012_0 Sigma-54 interaction domain K10941 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006499 535.0
YHH3_k127_7073012_1 PFAM response regulator receiver K10943 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005305 504.0
YHH3_k127_7073012_2 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002567 420.0
YHH3_k127_7073012_3 The M ring may be actively involved in energy transduction K02409 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004565 325.0
YHH3_k127_7073012_4 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 308.0
YHH3_k127_7073012_5 Histidine kinase K10942 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 302.0
YHH3_k127_7073012_6 flagellar protein FliS K02422 - - 0.000000000000000000000000000000000000008884 149.0
YHH3_k127_7073012_7 Flagellar hook-basal body K02408 - - 0.0000000000000000000000000000001195 126.0
YHH3_k127_7073012_8 Atypical PilZ domain, cyclic di-GMP receptor - - - 0.0000000000003239 78.0
YHH3_k127_7073012_9 flagellar protein FlaG K06603 - - 0.00001351 53.0
YHH3_k127_7083624_0 Protein of unknown function (DUF3570) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008363 266.0
YHH3_k127_7083624_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000001911 207.0
YHH3_k127_7083624_2 - - - - 0.000000000000000000000000000000000000000000000000000006229 194.0
YHH3_k127_7083624_3 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000009979 162.0
YHH3_k127_7083624_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000002508 153.0
YHH3_k127_7083624_6 Bacterial SH3 domain - - - 0.0000002889 54.0
YHH3_k127_7115045_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1094.0
YHH3_k127_7115045_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 2.079e-215 674.0
YHH3_k127_7115045_2 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 604.0
YHH3_k127_7126486_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 476.0
YHH3_k127_7126486_1 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000003994 244.0
YHH3_k127_7126486_2 Response regulator, receiver K11443 - - 0.0000000000000000000000000000001498 128.0
YHH3_k127_7126486_3 Subtilase family - - - 0.00001304 59.0
YHH3_k127_7127299_0 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 2.208e-242 766.0
YHH3_k127_7127299_1 iron assimilation K07223 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 336.0
YHH3_k127_7127299_2 lytic transglycosylase activity - - - 0.0000000000000000000000001541 119.0
YHH3_k127_7147631_0 Molecular chaperone. Has ATPase activity K04079 - - 1.77e-292 909.0
YHH3_k127_7147631_1 PFAM phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 466.0
YHH3_k127_7147631_2 Large extracellular alpha-helical protein - - - 0.000000000000000000000000000000000000000000000007393 194.0
YHH3_k127_7147631_3 protein histidine kinase activity - - - 0.0000000000000000000000000000000000003583 162.0
YHH3_k127_7147631_4 S4 RNA-binding domain K04762 GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003727,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009451,GO:0009628,GO:0009987,GO:0016070,GO:0033554,GO:0034605,GO:0034641,GO:0043021,GO:0043023,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000002234 136.0
YHH3_k127_7147631_5 Polymer-forming cytoskeletal - - - 0.0002279 49.0
YHH3_k127_7147631_6 Protein of unknown function (DUF4101) - - - 0.0009183 48.0
YHH3_k127_7239909_0 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 364.0
YHH3_k127_7239909_1 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001613 269.0
YHH3_k127_7239909_2 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000001556 186.0
YHH3_k127_7239909_3 pfam nudix - - - 0.000000000000000000000000000000000000000000000000002339 187.0
YHH3_k127_7239909_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000001079 134.0
YHH3_k127_7239909_5 ABC-type transport auxiliary lipoprotein component K18480 - - 0.0000000000000000000000000106 119.0
YHH3_k127_7239909_6 MlaD protein K02067 - - 0.000000000000000000000000341 113.0
YHH3_k127_7239909_7 Protein of unknown function (DUF1289) - - - 0.000000000000004266 77.0
YHH3_k127_7323683_0 - - - - 3.828e-261 812.0
YHH3_k127_7323683_1 Concanavalin A-like lectin/glucanases superfamily - - - 1.351e-253 802.0
YHH3_k127_7323683_2 kinase activity K07154 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008635 473.0
YHH3_k127_7323683_3 heat shock protein DnaJ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001899 273.0
YHH3_k127_7323683_4 - - - - 0.00000000000000000000000000000000000000000000001269 181.0
YHH3_k127_7323683_5 nucleotidyltransferase activity - - - 0.00000000000000000000000000000000006255 135.0
YHH3_k127_7323683_7 ATPase (AAA superfamily K07133 - - 0.0000000004917 64.0
YHH3_k127_7323683_8 RNA uridylyltransferase activity - - - 0.0000000214 60.0
YHH3_k127_7323683_9 Domain of unknown function (DUF4143) - - - 0.00000109 51.0
YHH3_k127_7386314_0 PFAM NAD-dependent epimerase dehydratase K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005994 532.0
YHH3_k127_7386314_1 PFAM Type II secretion system protein E K02454 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006891 525.0
YHH3_k127_7386314_10 Evidence 4 Homologs of previously reported genes of K07114,K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007847 308.0
YHH3_k127_7386314_11 VanZ like family - - - 0.0000000000000000001984 94.0
YHH3_k127_7386314_2 TIGRFAM Undecaprenyl-phosphate glucose phosphotransferase K03606 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006183 489.0
YHH3_k127_7386314_3 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase K03606 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 461.0
YHH3_k127_7386314_4 RmuC family K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007344 434.0
YHH3_k127_7386314_5 Squalene phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 405.0
YHH3_k127_7386314_6 COG0608 Single-stranded DNA-specific exonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006755 361.0
YHH3_k127_7386314_7 Squalene/phytoene synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 312.0
YHH3_k127_7386314_8 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004692 300.0
YHH3_k127_7386314_9 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009414 311.0
YHH3_k127_7390306_0 Bacterial protein of unknown function (DUF839) K07093 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 604.0
YHH3_k127_7390306_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 572.0
YHH3_k127_7390306_2 Bacterial protein of unknown function (DUF839) K07093 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 469.0
YHH3_k127_7390306_3 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 303.0
YHH3_k127_7410139_0 Periplasmic component of the Tol biopolymer transport system - - - 2.297e-198 651.0
YHH3_k127_7410139_1 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 5.304e-195 615.0
YHH3_k127_7410139_10 COG2346, Truncated hemoglobins K03406,K06886 GO:0001505,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008941,GO:0009056,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0016491,GO:0016705,GO:0016708,GO:0017144,GO:0019825,GO:0020012,GO:0020037,GO:0030682,GO:0034641,GO:0036094,GO:0042133,GO:0042135,GO:0042221,GO:0042737,GO:0043207,GO:0044237,GO:0044248,GO:0044270,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046209,GO:0046210,GO:0046906,GO:0048037,GO:0050896,GO:0051213,GO:0051410,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0065007,GO:0065008,GO:0072593,GO:0075136,GO:0097159,GO:0098754,GO:1901363,GO:1901698,GO:2001057 - 0.0000000000000000000000000000000000000000000000000000000000003104 213.0
YHH3_k127_7410139_11 Sel1-like repeats. K07126 - - 0.00000000000000000000000000000000000000000001165 172.0
YHH3_k127_7410139_12 DUF218 domain - - - 0.0000000000000000000000000000000000000000001531 168.0
YHH3_k127_7410139_13 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000000000000000000000000000006734 160.0
YHH3_k127_7410139_14 Protein of unknown function (DUF2452) - - - 0.000000000000000000000000000000000000001588 153.0
YHH3_k127_7410139_15 - - - - 0.000000001683 61.0
YHH3_k127_7410139_16 - - - - 0.0000000223 66.0
YHH3_k127_7410139_2 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 446.0
YHH3_k127_7410139_3 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 373.0
YHH3_k127_7410139_4 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050,K15554,K15599 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008167 315.0
YHH3_k127_7410139_5 16S rRNA methyltransferase RsmB/F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 302.0
YHH3_k127_7410139_6 Oxidoreductase FAD-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 297.0
YHH3_k127_7410139_7 COG3104 Dipeptide tripeptide permease K03305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003778 261.0
YHH3_k127_7410139_8 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002449 261.0
YHH3_k127_7410139_9 E3 Ubiquitin ligase - - - 0.00000000000000000000000000000000000000000000000000000000000005399 226.0
YHH3_k127_7479966_0 carbamoyl transferase, NodU family K00612 - - 2.815e-291 904.0
YHH3_k127_7479966_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004539 492.0
YHH3_k127_7479966_2 nodulation - - - 0.0000000000000000000000000003049 119.0
YHH3_k127_7479966_3 endonuclease - - - 0.000000000000000002443 87.0
YHH3_k127_7479966_4 - - - - 0.0000000000000001471 81.0
YHH3_k127_7533566_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 2.9e-198 622.0
YHH3_k127_7533566_1 phospholipase C K04618 - 1.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002807 325.0
YHH3_k127_7533566_2 TIGRFAM chain length determinant protein EpsF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001448 276.0
YHH3_k127_7533566_3 polysaccharide export protein K01991 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003184 258.0
YHH3_k127_7533566_4 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007023 257.0
YHH3_k127_7533566_5 - - - - 0.0000000000000000000000000000000001135 142.0
YHH3_k127_7533566_6 Glycosyltransferase like family 2 - - - 0.00000000000000000000000002011 121.0
YHH3_k127_7533566_7 GDSL-like Lipase/Acylhydrolase family - - - 0.0000002461 65.0
YHH3_k127_7625453_0 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 573.0
YHH3_k127_7625453_1 NAD-dependent epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 299.0
YHH3_k127_7631548_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1192.0
YHH3_k127_7631548_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008287 297.0
YHH3_k127_7631548_2 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000005003 229.0
YHH3_k127_7631548_3 nuclease - - - 0.000000000000000000000000000000000000007803 157.0
YHH3_k127_7631548_4 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000000003561 126.0
YHH3_k127_7644560_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1265.0
YHH3_k127_7644560_1 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009432 587.0
YHH3_k127_7644560_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002777 287.0
YHH3_k127_7644560_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008706 288.0
YHH3_k127_7644560_4 DsrE/DsrF/DrsH-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000212 217.0
YHH3_k127_7644560_5 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - - - 0.0000000000000000000007556 101.0
YHH3_k127_7644560_6 Sulfurtransferase TusA K04085 - - 0.0000000000000000000009234 99.0
YHH3_k127_7660705_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 478.0
YHH3_k127_7660705_1 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 353.0
YHH3_k127_7660705_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000002289 248.0
YHH3_k127_7660705_3 PFAM AIR synthase related protein domain protein K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000004904 163.0
YHH3_k127_7660705_4 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000001531 168.0
YHH3_k127_7675642_0 Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system K02045 - 3.6.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 521.0
YHH3_k127_7675642_1 sulfate ABC transporter, permease protein CysW K02047 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 434.0
YHH3_k127_7675642_2 Sulfate ABC transporter, permease protein CysT K02046 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 433.0
YHH3_k127_7675642_3 sulfate ABC transporter K02048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005632 323.0
YHH3_k127_7694588_0 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 442.0
YHH3_k127_7694588_3 Protein phosphatase 2C K01090,K20074 - 3.1.3.16 0.000001037 60.0
YHH3_k127_7694588_4 - - - - 0.0001619 49.0
YHH3_k127_7744599_0 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 610.0
YHH3_k127_7744599_1 lytic transglycosylase activity K08306,K08308,K08309 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009279,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0019867,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031224,GO:0031225,GO:0031975,GO:0033554,GO:0034599,GO:0042221,GO:0042597,GO:0043170,GO:0044425,GO:0044462,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0061783,GO:0070887,GO:0071236,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 488.0
YHH3_k127_7744599_2 Trypsin-like peptidase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 348.0
YHH3_k127_7744599_3 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000003646 252.0
YHH3_k127_7744599_4 protein conserved in bacteria - - - 0.000000000000000000000000000000003075 132.0
YHH3_k127_7744599_5 FHA domain - - - 0.00000000000000000000000000007174 128.0
YHH3_k127_7744599_6 - - - - 0.000000000000000000003208 100.0
YHH3_k127_7744599_7 Family of unknown function (DUF5329) - - - 0.0000000000000000003967 91.0
YHH3_k127_7885388_0 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000002177 232.0
YHH3_k127_7885388_1 Disulfide bond formation protein DsbB K03611 - - 0.000000000000000000000000000000000000000000005247 168.0
YHH3_k127_7885388_2 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.00000000000000000000000000000000000000009505 173.0
YHH3_k127_7885388_3 Transposase IS200 like - - - 0.0000000000000000006731 90.0
YHH3_k127_7894332_0 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 284.0
YHH3_k127_7894332_1 PFAM Eukaryotic-type carbonic anhydrase K01674 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000004647 257.0
YHH3_k127_7894332_2 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000276 233.0
YHH3_k127_7894332_3 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.000000000000000000000000000000000000000000000000007102 190.0
YHH3_k127_7894332_4 PFAM porin Gram-negative type - - - 0.000000000000000000000000000006602 128.0
YHH3_k127_7894332_5 - - - - 0.00000000005829 66.0
YHH3_k127_7918955_0 Radical SAM superfamily K04069 - 1.97.1.4 9.734e-196 619.0
YHH3_k127_7918955_1 Belongs to the MEMO1 family K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 338.0
YHH3_k127_7918955_2 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001424 272.0
YHH3_k127_7918955_3 intermediate-associated protein 30 - - - 0.0000000000000000000000000000000000000000000000000002329 191.0
YHH3_k127_7918955_4 Rhs family - - - 0.00000000000000003753 88.0
YHH3_k127_7918955_5 Putative transposase - - - 0.0000007376 54.0
YHH3_k127_7918955_6 RHS Repeat - - - 0.00003493 50.0
YHH3_k127_8032620_0 fad dependent oxidoreductase K07137 - - 9.487e-225 700.0
YHH3_k127_8032620_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 590.0
YHH3_k127_8032620_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 426.0
YHH3_k127_8032620_3 SpoU rRNA Methylase family K03437 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001503 250.0
YHH3_k127_8032620_4 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000006407 240.0
YHH3_k127_8032620_5 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000001365 238.0
YHH3_k127_8032620_6 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000008591 175.0
YHH3_k127_8036381_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 6.618e-222 703.0
YHH3_k127_8036381_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 1.459e-213 672.0
YHH3_k127_8036381_10 Plasmid pRiA4b ORF-3-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000001055 231.0
YHH3_k127_8036381_11 Protein of unknown function (DUF489) K07153 - - 0.0000000000000000000000000000000000000000000000000000000005217 209.0
YHH3_k127_8036381_12 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000002092 148.0
YHH3_k127_8036381_13 protein acetylation - - - 0.000000000000000000000000000008197 124.0
YHH3_k127_8036381_14 Protein of unknown function (DUF504) - - - 0.0000000000000000000000001401 107.0
YHH3_k127_8036381_15 Bacterial type II and III secretion system protein - - - 0.0000000000000000000004796 106.0
YHH3_k127_8036381_16 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.00000000000000004124 93.0
YHH3_k127_8036381_17 Protein of unknown function (DUF2892) - - - 0.00000000000000005005 82.0
YHH3_k127_8036381_18 - - - - 0.0000000001987 65.0
YHH3_k127_8036381_2 3-Deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase K03856,K04516 - 2.5.1.54,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 583.0
YHH3_k127_8036381_3 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004385 528.0
YHH3_k127_8036381_4 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009003 468.0
YHH3_k127_8036381_5 N-acetylmuramoyl-L-alanine amidase K01448 GO:0000003,GO:0000910,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0008745,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019954,GO:0022402,GO:0022414,GO:0030288,GO:0030313,GO:0031975,GO:0032505,GO:0042597,GO:0043093,GO:0044464,GO:0051301,GO:0061783 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 461.0
YHH3_k127_8036381_6 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004787 453.0
YHH3_k127_8036381_7 Belongs to the agmatine deiminase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000398 378.0
YHH3_k127_8036381_8 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003759 276.0
YHH3_k127_8036381_9 TIGRFAM Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000005728 235.0
YHH3_k127_8051245_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 415.0
YHH3_k127_8051245_1 Concanavalin A-like lectin/glucanases superfamily - - - 0.000000000000000000000000008337 120.0
YHH3_k127_8051245_2 Domain of unknown function (DUF4340) - - - 0.0000000005146 69.0
YHH3_k127_8083373_0 2-methylcitrate dehydratase K01720 - 4.2.1.79 9.016e-219 686.0
YHH3_k127_8083373_1 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 324.0
YHH3_k127_8108557_0 conserved repeat domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000571 260.0
YHH3_k127_8108557_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000004225 120.0
YHH3_k127_8108557_2 RHS Repeat - - - 0.0000000000001392 78.0
YHH3_k127_8120528_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 3.841e-215 676.0
YHH3_k127_8120528_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004017 606.0
YHH3_k127_8120528_10 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.000000000000000000000000000000001653 130.0
YHH3_k127_8120528_2 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002895 273.0
YHH3_k127_8120528_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000002442 255.0
YHH3_k127_8120528_4 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000000000002992 232.0
YHH3_k127_8120528_5 Protein of unknown function (DUF3047) - - - 0.000000000000000000000000000000000000000000000000000000000000003816 223.0
YHH3_k127_8120528_6 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000000000000000000000000000001629 186.0
YHH3_k127_8120528_7 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000009854 181.0
YHH3_k127_8120528_8 membrane - - - 0.00000000000000000000000000000000000000000001114 174.0
YHH3_k127_8120528_9 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000006635 134.0
YHH3_k127_8136069_0 Protein of unknown function (DUF3604) - - - 0.0 1072.0
YHH3_k127_8136069_1 Protein of unknown function (DUF3604) - - - 4.555e-258 810.0
YHH3_k127_8136069_2 Protein of unknown function (DUF3604) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006352 574.0
YHH3_k127_8136069_3 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000316 276.0
YHH3_k127_8136069_4 TIGRFAM alkylphosphonate utilization operon protein PhnA K06193 - - 0.0000000000000000000000000000000000000000000000000000000005536 202.0
YHH3_k127_8136069_5 Protein of unknown function (DUF3604) - - - 0.000000000000000000000000000000000000002372 149.0
YHH3_k127_8136069_6 YMGG-like Gly-zipper - - - 0.000000000000000000000000000000000000007915 154.0
YHH3_k127_8136069_7 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000002879 155.0
YHH3_k127_8136069_8 Sel1-like repeats. K07126 - - 0.0003686 53.0
YHH3_k127_8149169_0 ThiF family K21029,K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 578.0
YHH3_k127_8149169_1 Acid phosphatase homologues K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009668 352.0
YHH3_k127_8149169_2 PFAM pfkB family carbohydrate kinase K00846 - 2.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008519 324.0
YHH3_k127_8149169_3 Diguanylate cyclase K02488 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008869 322.0
YHH3_k127_8149169_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000846 254.0
YHH3_k127_8149169_5 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000638 184.0
YHH3_k127_8149169_6 protein ubiquitination K15502,K16726 GO:0000785,GO:0001568,GO:0001654,GO:0001745,GO:0001751,GO:0001754,GO:0001817,GO:0001819,GO:0001944,GO:0001955,GO:0002376,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002831,GO:0002833,GO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005694,GO:0005737,GO:0006275,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007005,GO:0007010,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007346,GO:0007399,GO:0007423,GO:0007492,GO:0008150,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009887,GO:0009888,GO:0009889,GO:0009892,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009987,GO:0010506,GO:0010507,GO:0010556,GO:0010564,GO:0010639,GO:0010646,GO:0010647,GO:0010821,GO:0010823,GO:0010927,GO:0010941,GO:0012505,GO:0016020,GO:0016043,GO:0019219,GO:0019222,GO:0019730,GO:0019899,GO:0019900,GO:0019901,GO:0021700,GO:0022008,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030036,GO:0030154,GO:0030182,GO:0030239,GO:0031032,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031329,GO:0031330,GO:0031347,GO:0031349,GO:0031430,GO:0031672,GO:0031674,GO:0031965,GO:0031967,GO:0031975,GO:0032101,GO:0032103,GO:0032501,GO:0032502,GO:0032989,GO:0033043,GO:0039531,GO:0039533,GO:0039535,GO:0040011,GO:0042692,GO:0042742,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043122,GO:0043123,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043292,GO:0043900,GO:0043902,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044449,GO:0044464,GO:0045087,GO:0045088,GO:0045089,GO:0045214,GO:0045595,GO:0045596,GO:0045787,GO:0045931,GO:0046530,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048592,GO:0048646,GO:0048699,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0050688,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051093,GO:0051128,GO:0051129,GO:0051146,GO:0051147,GO:0051148,GO:0051150,GO:0051151,GO:0051171,GO:0051239,GO:0051240,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0055001,GO:0055002,GO:0060255,GO:0060361,GO:0060548,GO:0061061,GO:0065007,GO:0070925,GO:0071695,GO:0071840,GO:0072358,GO:0072359,GO:0080090,GO:0080134,GO:0090068,GO:0090596,GO:0097435,GO:0098542,GO:0099080,GO:0099081,GO:0099512,GO:1900087,GO:1900245,GO:1900246,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902531,GO:1902533,GO:1902806,GO:1902808,GO:1903146,GO:1903147,GO:2000045,GO:2000112 - 0.00000000000000000000007317 107.0
YHH3_k127_8149169_7 YbaK prolyl-tRNA synthetase associated K19055 - - 0.000000000000008367 82.0
YHH3_k127_8149169_8 low-complexity proteins - - - 0.00000000993 61.0
YHH3_k127_8149169_9 Secondary thiamine-phosphate synthase enzyme - - - 0.000002558 56.0
YHH3_k127_8156331_0 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 332.0
YHH3_k127_8156331_1 metallopeptidase activity K01218,K13276 - 3.2.1.78 0.000000000000000000000000000000000000000003607 177.0
YHH3_k127_8164313_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 1.091e-269 842.0
YHH3_k127_8164313_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01581,K01586 - 4.1.1.17,4.1.1.20 4.196e-211 664.0
YHH3_k127_8164313_10 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 317.0
YHH3_k127_8164313_11 Pentapeptide - - - 0.00000000000000000000000000000000000001578 147.0
YHH3_k127_8164313_12 - - - - 0.00000000000000000000000000000000002591 154.0
YHH3_k127_8164313_13 - - - - 0.000000000000000000000003154 106.0
YHH3_k127_8164313_14 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.0000000000000005839 82.0
YHH3_k127_8164313_15 HNH nucleases - - - 0.0000000000002912 76.0
YHH3_k127_8164313_16 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000003154 74.0
YHH3_k127_8164313_17 SET domain K07117 - - 0.0000209 51.0
YHH3_k127_8164313_2 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 612.0
YHH3_k127_8164313_3 glutamate--cysteine ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005862 511.0
YHH3_k127_8164313_4 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 483.0
YHH3_k127_8164313_5 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007997 414.0
YHH3_k127_8164313_6 Belongs to the GarS family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 402.0
YHH3_k127_8164313_7 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006878 399.0
YHH3_k127_8164313_8 PFAM Succinylglutamate desuccinylase Aspartoacylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 394.0
YHH3_k127_8164313_9 PFAM Aminoglycoside phosphotransferase K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 372.0
YHH3_k127_816469_0 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 2.951e-247 786.0
YHH3_k127_816469_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 6.417e-225 703.0
YHH3_k127_816469_2 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000007804 210.0
YHH3_k127_816469_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000000005602 155.0
YHH3_k127_816469_4 Thioredoxin-like - - - 0.00000000000000000000000000000000000002241 154.0
YHH3_k127_816469_5 CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000000000005215 128.0
YHH3_k127_816469_6 PFAM FxsA cytoplasmic membrane protein K07113 - - 0.000000000000000000000000000005988 125.0
YHH3_k127_816469_7 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000002449 86.0
YHH3_k127_822372_0 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 536.0
YHH3_k127_822372_1 twitching motility protein K02670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000762 496.0
YHH3_k127_822372_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 506.0
YHH3_k127_822372_3 Protein of unknown function (DUF3641) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 470.0
YHH3_k127_822372_4 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009283 427.0
YHH3_k127_822372_5 Oxidoreductase FAD-binding domain K02823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001484 274.0
YHH3_k127_822372_6 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.00000000000000000000000000000000000000000000000000000000003187 214.0
YHH3_k127_822372_7 - - - - 0.000000000000000000000000000009996 121.0
YHH3_k127_8229479_0 Bacteriophage N4 adsorption protein B K11740 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 567.0
YHH3_k127_8229479_1 Bacteriophage N adsorption protein A C-term - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003301 445.0
YHH3_k127_8229479_2 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 360.0
YHH3_k127_8229479_3 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 335.0
YHH3_k127_8229479_4 Domain of unknown function (DUF4434) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009693 258.0
YHH3_k127_8259810_0 Nickel-dependent hydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005529 455.0
YHH3_k127_8259810_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 451.0
YHH3_k127_8259810_2 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007441 399.0
YHH3_k127_8259810_3 Coenzyme F420-reducing hydrogenase, gamma subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 361.0
YHH3_k127_8259810_4 Protein of unknown function (DUF455) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006388 277.0
YHH3_k127_8441420_0 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 342.0
YHH3_k127_8441420_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 302.0
YHH3_k127_8441420_2 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000001345 256.0
YHH3_k127_8538460_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 8.594e-298 938.0
YHH3_k127_8538460_1 PFAM Aminotransferase class I and II K14267 - 2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 545.0
YHH3_k127_8538460_2 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 443.0
YHH3_k127_8538460_3 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000000000004616 230.0
YHH3_k127_8538460_4 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000002231 218.0
YHH3_k127_8538460_5 proteolysis - - - 0.000000000000000000000000000000000004976 145.0
YHH3_k127_8538460_6 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000335 67.0
YHH3_k127_8544784_0 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 537.0
YHH3_k127_8544784_1 SAM-dependent K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 477.0
YHH3_k127_8544784_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009058,GO:0009059,GO:0009898,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0019538,GO:0031224,GO:0031226,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0140096,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 398.0
YHH3_k127_8544784_3 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000002592 172.0
YHH3_k127_8544784_4 LVIVD repeat - - - 0.0000000000000000000000000000000000000000001295 179.0
YHH3_k127_8544784_5 - - - - 0.00000000000000000475 93.0
YHH3_k127_8616034_0 Nitroreductase family - - - 4.941e-204 645.0
YHH3_k127_8616034_1 Glycosyl transferase family group 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003293 495.0
YHH3_k127_8616034_2 membrane protein involved in D-alanine export - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 472.0
YHH3_k127_8616034_3 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 366.0
YHH3_k127_8616034_4 - - - - 0.000000000000000000000000000000000000000000000000245 193.0
YHH3_k127_8616034_5 Polysaccharide deacetylase - - - 0.000000000000000000000000000000004508 140.0
YHH3_k127_8616034_6 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 0.000006464 51.0
YHH3_k127_8617784_0 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 517.0
YHH3_k127_8617784_1 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 445.0
YHH3_k127_8617784_2 Belongs to the ompA family - - - 0.00000000000000000000000000002346 128.0
YHH3_k127_8617784_3 DNA-binding protein VF530 - - - 0.000000000000000000000000000036 118.0
YHH3_k127_8617784_4 RNA-binding protein - - - 0.00000000000000000000000002486 113.0
YHH3_k127_8617784_5 transferase activity, transferring glycosyl groups K19003,K20327 - 2.4.1.336 0.000000000000000002026 87.0
YHH3_k127_8617784_6 Domain of unknown function (DUF4398) - - - 0.000000001499 64.0
YHH3_k127_8626686_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 1.79e-303 964.0
YHH3_k127_8626686_1 PFAM Type II secretion system protein E K02670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007692 524.0
YHH3_k127_8626686_2 COG0488 ATPase components of ABC transporters with duplicated ATPase domains K15738 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010528,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031323,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0070894,GO:0071944,GO:0080090,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000007528 227.0
YHH3_k127_8643597_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1224.0
YHH3_k127_8643597_1 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 435.0
YHH3_k127_8643597_10 Cupin 2, conserved barrel domain protein - - - 0.00000000000002978 73.0
YHH3_k127_8643597_11 Copper binding periplasmic protein CusF - - - 0.000001604 54.0
YHH3_k127_8643597_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006268 268.0
YHH3_k127_8643597_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004284 256.0
YHH3_k127_8643597_4 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000004633 203.0
YHH3_k127_8643597_5 PFAM HNH endonuclease - - - 0.0000000000000000000000000000000000000000000002301 170.0
YHH3_k127_8643597_6 PFAM Outer membrane lipoprotein Slp K07285 - - 0.00000000000000000000000000000000000000001396 159.0
YHH3_k127_8643597_7 Protein of unknown function (DUF2845) - - - 0.00000000000000000000000000002985 124.0
YHH3_k127_8643597_8 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000005719 114.0
YHH3_k127_8643597_9 protein conserved in bacteria K01790 GO:0008150,GO:0009987,GO:0042710,GO:0044010,GO:0044764,GO:0051704 5.1.3.13 0.00000000000000000000000002937 111.0
YHH3_k127_872090_0 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000636 232.0
YHH3_k127_872090_1 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.000000000000000000000000000000000000000000002608 174.0
YHH3_k127_872090_2 Histidine kinase - - - 0.0000000000000000173 87.0
YHH3_k127_8741669_0 transferase activity, transferring glycosyl groups - - - 1.309e-267 841.0
YHH3_k127_8741669_1 argininosuccinate lyase K01755 - 4.3.2.1 3.86e-215 676.0
YHH3_k127_8741669_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018065,GO:0018130,GO:0018160,GO:0018193,GO:0018198,GO:0019438,GO:0019538,GO:0033013,GO:0033014,GO:0034641,GO:0036211,GO:0042168,GO:0042440,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 431.0
YHH3_k127_8741669_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family K00569 - 2.1.1.67 0.000000000000000000000000000000000000000000000000000000000000000000000000595 251.0
YHH3_k127_8741669_4 HemY domain protein K02498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000151 249.0
YHH3_k127_8741669_5 Uroporphyrinogen III synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000007788 190.0
YHH3_k127_8741669_6 HemX, putative uroporphyrinogen-III C-methyltransferase K02496 - 2.1.1.107 0.00000000000000000000000000000285 136.0
YHH3_k127_8742944_0 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006771 336.0
YHH3_k127_8742944_1 Predicted Peptidoglycan domain - - - 0.00000000000000000000000000000000006264 139.0
YHH3_k127_8742944_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000139 103.0
YHH3_k127_8742944_3 Periplasmic or secreted lipoprotein - - - 0.00000004199 57.0
YHH3_k127_876804_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003625 512.0
YHH3_k127_876804_1 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 323.0
YHH3_k127_876804_2 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000009913 241.0
YHH3_k127_876804_3 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000000000257 224.0
YHH3_k127_876804_4 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000005967 179.0
YHH3_k127_876804_5 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008962,GO:0009058,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016021,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0030258,GO:0031224,GO:0031226,GO:0032026,GO:0042221,GO:0042577,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0046839,GO:0050896,GO:0071704,GO:0071944,GO:0090407,GO:1901576 3.1.3.27 0.0000000000000000000000127 102.0
YHH3_k127_876804_6 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000002486 81.0
YHH3_k127_8768118_0 Putative peptidoglycan binding domain K02450 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 390.0
YHH3_k127_8768118_1 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000004265 231.0
YHH3_k127_8768118_2 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000003229 207.0
YHH3_k127_8768118_3 Domain of unknown function (DUF4268) - - - 0.00000000000000000000000000000000000000000000000000003109 201.0
YHH3_k127_8783174_0 TIGRFAM RHS repeat-associated core domain - - - 1.232e-305 987.0
YHH3_k127_8788972_0 antiporter K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 471.0
YHH3_k127_8788972_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 477.0
YHH3_k127_8788972_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 440.0
YHH3_k127_8788972_3 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 367.0
YHH3_k127_8788972_4 GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002844 267.0
YHH3_k127_8788972_5 PFAM alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001059 262.0
YHH3_k127_8788972_6 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002806 235.0
YHH3_k127_8788972_7 COG2897 Rhodanese-related sulfurtransferase - - - 0.00000000000000000000000000000000000000000000000000000000000002566 226.0
YHH3_k127_8788972_8 ATPase activity, coupled to transmembrane movement of substances - - - 0.00000000000000000009428 91.0
YHH3_k127_8805854_0 PFAM Oxidoreductase FAD NAD(P)-binding K00380,K02641,K15511 - 1.14.13.208,1.18.1.2,1.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 384.0
YHH3_k127_8805854_1 Part of a membrane complex involved in electron transport K03617 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005019 267.0
YHH3_k127_8805854_2 Part of a membrane complex involved in electron transport K03613 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002009 267.0
YHH3_k127_8805854_3 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000009649 190.0
YHH3_k127_8805854_4 Part of a membrane complex involved in electron transport K03612 - - 0.0000000000000000000000000000000004461 138.0
YHH3_k127_8805854_5 glycosyl transferase family 8 - - - 0.000000000000000000000000000712 121.0
YHH3_k127_8815045_0 Domain of unknown function (DUF3458_C) ARM repeats K01256 - 3.4.11.2 3.393e-311 976.0
YHH3_k127_8815045_1 Signal transduction histidine kinase K07637 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 352.0
YHH3_k127_8815045_2 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07660 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005889 300.0
YHH3_k127_8815045_3 Belongs to the Nudix hydrolase family K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000001591 171.0
YHH3_k127_8815045_4 TIGRFAM RHS repeat-associated core domain - - - 0.000000000000000000000000000000000000004913 159.0
YHH3_k127_8815045_5 17 kDa surface antigen - - - 0.00000000000000000000000000000000002421 140.0
YHH3_k127_8815045_7 - - - - 0.0000000393 58.0
YHH3_k127_8815045_8 Uncharacterised protein family (UPF0270) K09898 - - 0.0000001998 55.0
YHH3_k127_8893806_0 ABC transporter transmembrane region K06147 - - 2.882e-257 805.0
YHH3_k127_8893806_1 PFAM Integrase - - - 1.286e-222 694.0
YHH3_k127_8893806_2 - - - - 0.0000000000000000000000000000000004892 138.0
YHH3_k127_8893806_3 - - - - 0.000000000000000000000000001944 126.0
YHH3_k127_8893806_4 Putative general bacterial porin - - - 0.0000005364 61.0
YHH3_k127_8894461_0 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007859 604.0
YHH3_k127_8894461_1 UPF0313 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 397.0
YHH3_k127_8894461_2 KAP family P-loop domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004184 315.0
YHH3_k127_8894461_3 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.000000000000000000000000000000002562 141.0
YHH3_k127_8894461_4 small protein containing a coiled-coil domain - - - 0.0000000000000000002923 92.0
YHH3_k127_8916396_0 PFAM multicopper oxidase type 1 - - - 1.021e-202 638.0
YHH3_k127_8916396_1 Domain of unknown function (DUF4143) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 494.0
YHH3_k127_8916396_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000002885 209.0
YHH3_k127_8916396_3 Protein of unknown function (DUF1778) - - - 0.0000000000000000000000000000007996 124.0
YHH3_k127_8916396_4 Filamentation induced by cAMP protein fic - - - 0.0000000002154 69.0
YHH3_k127_8935002_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000414 612.0
YHH3_k127_8935002_1 TIGRFAM Glutaredoxin-family domain - GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008766 364.0
YHH3_k127_8935002_2 Bacterial regulatory helix-turn-helix protein, lysR family K04761 - - 0.00000000000000000000000000000000000000000000000000000000000000000003604 235.0
YHH3_k127_8935002_3 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000001884 197.0
YHH3_k127_8935002_4 Lactonase, 7-bladed beta-propeller - - - 0.00000000000000000001215 101.0
YHH3_k127_8976290_0 CRISPR-associated protein (Cas_Csd1) - - - 8.507e-226 712.0
YHH3_k127_8976290_1 CRISPR-associated protein Cas7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004155 484.0
YHH3_k127_8976290_2 TIGRFAM CRISPR-associated protein K19119 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 329.0
YHH3_k127_8976290_3 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette K15342 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004337 277.0
YHH3_k127_8976290_4 TIGRFAM CRISPR-associated protein Cas4 K07464 - 3.1.12.1 0.00000000000000000000000000000000000000000000000000000000000000000000000004224 258.0
YHH3_k127_9012099_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 3.173e-275 865.0
YHH3_k127_9012099_1 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000009283 234.0
YHH3_k127_9012698_0 AcrB/AcrD/AcrF family K07787 - - 0.0 1401.0
YHH3_k127_9012698_1 HlyD membrane-fusion protein of T1SS K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 335.0
YHH3_k127_9012698_2 Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host K05801 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001922 279.0
YHH3_k127_9012698_3 PFAM Glutathione S-transferase, N-terminal K03599 - - 0.00000000000000000000000000000000000000000000000000000000000000002394 230.0
YHH3_k127_9012698_4 phosphatase homologous to the C-terminal domain of histone macroH2A1 - GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005515,GO:0008150,GO:0008428,GO:0009892,GO:0010605,GO:0016787,GO:0019213,GO:0019219,GO:0019222,GO:0019899,GO:0030234,GO:0031323,GO:0031324,GO:0032069,GO:0032074,GO:0043086,GO:0043900,GO:0044092,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0061463,GO:0065007,GO:0065009,GO:0080090,GO:0098772,GO:1900190,GO:1900231 - 0.000000000000000000000000000000000000000000000000000000000000003519 220.0
YHH3_k127_9012698_5 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000001741 179.0
YHH3_k127_9012698_6 Stringent starvation protein B K03600 - - 0.000000000000000000000000000000000000000001549 160.0
YHH3_k127_9012698_7 Predicted membrane protein (DUF2231) - - - 0.00000000000000000000000000000000000000002956 161.0
YHH3_k127_9012698_8 Late competence development protein ComFB - - - 0.0000000000000000002499 91.0
YHH3_k127_9018705_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004442 485.0
YHH3_k127_9018705_1 (ABC) transporter K11004,K13409 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 365.0
YHH3_k127_9018705_2 ATPase (AAA superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008469 359.0
YHH3_k127_9018705_3 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0006139,GO:0006165,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:1901360 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000004955 243.0
YHH3_k127_9018705_4 TIGRFAM type IV pilus biogenesis stability protein PilW K02656 - - 0.00000000000000000000000000000000000000000001075 176.0
YHH3_k127_9018705_5 Hemolysin-type calcium-binding - - - 0.0000000000000000000000000000000003443 140.0
YHH3_k127_9018705_6 Domain of unknown function (DUF4115) K15539 - - 0.000000000000002903 83.0
YHH3_k127_9023241_0 HupE / UreJ protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 488.0
YHH3_k127_9023241_1 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 415.0
YHH3_k127_9023241_2 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 386.0
YHH3_k127_9023241_3 Integral membrane protein TerC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003187 317.0
YHH3_k127_9023241_4 Belongs to the P(II) protein family K04751,K04752 - - 0.000000000000000000000002002 104.0
YHH3_k127_9023241_5 - - - - 0.0000000000005985 74.0
YHH3_k127_9023241_6 Aminotransferase class I and II - - - 0.0000171 48.0
YHH3_k127_9063355_0 4-Hydroxyphenylpyruvate dioxygenase - - - 1.022e-216 682.0
YHH3_k127_9063355_1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006594 477.0
YHH3_k127_9063355_2 Branched-chain amino acid transport K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 316.0
YHH3_k127_9063355_3 A predicted alpha-helical domain with a conserved ER motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008674 287.0
YHH3_k127_9063355_4 PFAM Cyclic nucleotide-binding - - - 0.000000000000000000000000005366 116.0
YHH3_k127_9063355_5 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.00000000000000000000001477 101.0
YHH3_k127_9063355_6 ATPase, AAA K03924 - - 0.00000000002096 68.0
YHH3_k127_9091371_0 Ferric reductase like transmembrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 426.0
YHH3_k127_9091371_1 TIGRFAM efflux transporter, RND family, MFP subunit K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002888 382.0
YHH3_k127_9155108_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 460.0
YHH3_k127_9155108_1 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002061 288.0
YHH3_k127_9155108_2 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000002818 199.0
YHH3_k127_9155108_3 Tetratricopeptide repeat - - - 0.00000000000000000000000005052 126.0
YHH3_k127_9175473_0 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 452.0
YHH3_k127_9175473_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000579 333.0
YHH3_k127_9175473_2 Protein of unknown function (DUF3445) K22342 - 1.14.13.238 0.000000000000000000000000000000000000000000000000000000000000000000000000000002857 275.0
YHH3_k127_9175473_3 domain, Protein - - - 0.0000000000000000000000000000000000000000000000001169 198.0
YHH3_k127_9175473_4 NusG domain II - - - 0.00000000000000002221 87.0
YHH3_k127_9210777_0 TIGRFAM Arsenical-resistance protein K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009729 573.0
YHH3_k127_9210777_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003929 375.0
YHH3_k127_9210777_2 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 354.0
YHH3_k127_9210777_3 (belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family) - - - 0.0000000000000000000000000000000000000000000000000005016 186.0
YHH3_k127_9210777_4 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000884 173.0
YHH3_k127_921472_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1543.0
YHH3_k127_921472_1 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.00000000000000000000000000000000000000000000000008378 188.0
YHH3_k127_921472_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000001954 109.0
YHH3_k127_9236861_0 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 365.0
YHH3_k127_9236861_1 Protein of unknown function (DUF2959) - - - 0.0000000000000000000000000000000000000000000000000000000000003332 218.0
YHH3_k127_9236861_2 membrane K07283 - - 0.000000000000000000000009504 109.0
YHH3_k127_9236861_3 regulation of response to stimulus - - - 0.0000000004848 72.0
YHH3_k127_9236861_4 Fibronectin type III domain protein - - - 0.00009917 55.0
YHH3_k127_9243380_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000451 522.0
YHH3_k127_9243380_1 Phosphoglucomutase K01835 GO:0000271,GO:0003674,GO:0003824,GO:0004614,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0005982,GO:0005996,GO:0006006,GO:0006012,GO:0006073,GO:0006091,GO:0006112,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009250,GO:0009266,GO:0009409,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009581,GO:0009582,GO:0009590,GO:0009605,GO:0009628,GO:0009629,GO:0009941,GO:0009987,GO:0010319,GO:0015980,GO:0016051,GO:0016052,GO:0016853,GO:0016866,GO:0016868,GO:0019252,GO:0019318,GO:0019320,GO:0019388,GO:0031967,GO:0031975,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046365,GO:0048046,GO:0050896,GO:0051606,GO:0055114,GO:0071704,GO:1901575,GO:1901576 5.4.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003203 294.0
YHH3_k127_9243380_2 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 299.0
YHH3_k127_9253398_0 Belongs to the ClpA ClpB family K03694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 537.0
YHH3_k127_9253398_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006947 350.0
YHH3_k127_9253398_2 RNA pseudouridylate synthase K06181 - 5.4.99.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000445 252.0
YHH3_k127_9253398_3 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000000000000004287 158.0
YHH3_k127_9253398_4 Rhodanese Homology Domain - - - 0.00000000000000000000000000000009792 128.0
YHH3_k127_9253398_5 COG1278 Cold shock proteins K03704 GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000003529 109.0
YHH3_k127_9329629_0 Universal stress protein - - - 0.000000000000000000000000000000000000002671 152.0
YHH3_k127_9357729_0 AbgT putative transporter family K12942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 438.0
YHH3_k127_9357729_1 carbon-nitrogen hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003512 407.0
YHH3_k127_9357729_2 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001389 280.0
YHH3_k127_9357729_3 Methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000646 242.0
YHH3_k127_9357729_4 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000000000000000000000000000002862 161.0
YHH3_k127_9357729_5 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.00000000000000000000000000000000000000001791 163.0
YHH3_k127_9357729_6 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000001702 142.0
YHH3_k127_9357729_7 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K01955,K05844 - 6.3.5.5 0.000000000000000000000000000000003495 139.0
YHH3_k127_9357729_8 phosphate-selective porin K07221 - - 0.0000000000000000000000000000002265 138.0
YHH3_k127_937876_0 HD domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 440.0
YHH3_k127_937876_1 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000001525 188.0
YHH3_k127_937876_2 photosynthesis - - - 0.000000000000000000000000000000000000000007444 160.0
YHH3_k127_937876_3 Rhodanese Homology Domain - - - 0.00000000000000000000005913 104.0
YHH3_k127_937876_4 membrane K02451,K03832 - - 0.00000008366 57.0
YHH3_k127_940003_0 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004441 501.0
YHH3_k127_940003_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005284 454.0
YHH3_k127_940003_2 Belongs to the UPF0758 family K03630 GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009542 299.0
YHH3_k127_940003_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000002179 207.0
YHH3_k127_940003_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.000000000000000000000000000000000000000000000000001626 185.0
YHH3_k127_940003_5 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000000000000000006033 140.0
YHH3_k127_940003_6 there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc K02913 - - 0.000000000000000000004591 93.0
YHH3_k127_9494438_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1192.0
YHH3_k127_9494438_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000006228 273.0
YHH3_k127_9494438_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000002393 237.0
YHH3_k127_9494438_3 ANTAR K22010 - - 0.000000000000000000000000000000000000000000000001373 180.0
YHH3_k127_9494438_4 ANTAR domain - - - 0.00001395 55.0
YHH3_k127_9559643_0 acetyl-CoA carboxylase, biotin carboxylase K01959 - 6.4.1.1 5.467e-237 740.0
YHH3_k127_9559643_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005302 474.0
YHH3_k127_9559643_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007598 428.0
YHH3_k127_9559643_3 malonyl CoA-acyl carrier protein transacylase K00645 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000003346 255.0
YHH3_k127_9559643_4 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000000007166 107.0
YHH3_k127_9559643_5 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000011 113.0
YHH3_k127_9703007_0 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 1.708e-289 891.0
YHH3_k127_9703007_1 Carboxysome shell peptide mid-region - - - 3.201e-195 636.0
YHH3_k127_9703007_10 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B K15777 - - 0.0000000000000000000002297 99.0
YHH3_k127_9703007_11 ketose-bisphosphate aldolase K01624 - 4.1.2.13 0.000000000000000001297 96.0
YHH3_k127_9703007_12 ethanolamine catabolic process K04027 - - 0.000000000000002502 78.0
YHH3_k127_9703007_2 TIGRFAM carboxysome shell carbonic anhydrase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008384 564.0
YHH3_k127_9703007_3 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 300.0
YHH3_k127_9703007_4 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000003454 213.0
YHH3_k127_9703007_5 PFAM Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.000000000000000000000000000000000000000000000000000006396 191.0
YHH3_k127_9703007_6 carboxysome shell protein - - - 0.0000000000000000000000000000000000000000000000000003825 185.0
YHH3_k127_9703007_7 PFAM Ethanolamine utilization protein EutN carboxysome structural protein Ccml - - - 0.0000000000000000000000000000000000000000168 153.0
YHH3_k127_9703007_8 Beta-ketoacyl synthase, C-terminal domain - - - 0.0000000000000000000000000000005754 132.0
YHH3_k127_9703007_9 Ethanolamine utilisation protein EutN/carboxysome - - - 0.000000000000000000000000000001635 123.0
YHH3_k127_971177_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 3.18e-223 707.0
YHH3_k127_971177_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009605,GO:0009987,GO:0009991,GO:0015949,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030312,GO:0031667,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046128,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657 2.7.6.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000057 373.0
YHH3_k127_971177_2 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002744 276.0
YHH3_k127_971177_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000003292 236.0
YHH3_k127_9748131_0 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 3.94e-279 880.0
YHH3_k127_9748131_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 3.969e-250 774.0
YHH3_k127_9748131_2 NADH-quinone oxidoreductase subunit F K00335 - 1.6.5.3 1.515e-225 706.0
YHH3_k127_9748131_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 305.0
YHH3_k127_9748131_4 TIGRFAM NADH-quinone oxidoreductase, E subunit K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000004684 233.0
YHH3_k127_9748131_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00006179 45.0
YHH3_k127_9775648_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004572 571.0
YHH3_k127_9775648_1 Glycine cleavage system T protein K00605 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 472.0
YHH3_k127_9775648_2 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 GO:0001505,GO:0003674,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0017144,GO:0019464,GO:0019752,GO:0031405,GO:0031406,GO:0033293,GO:0036094,GO:0042133,GO:0042135,GO:0042737,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0048037,GO:0050662,GO:0065007,GO:0065008,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901681 - 0.0000000000000000000000000000000000000000000000000003464 186.0
YHH3_k127_9916255_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 9.107e-227 713.0
YHH3_k127_9916255_1 Thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000002173 200.0
YHH3_k127_9916255_2 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000000000000000000000000000000000000000003068 198.0
YHH3_k127_9916255_3 regulatory protein, arsR - - - 0.00000000000000000000000000000000000000000001509 164.0
YHH3_k127_9916255_4 Sulfurtransferase - - - 0.00000000000000000000000000003354 122.0
YHH3_k127_9916255_5 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000001312 104.0
YHH3_k127_9987502_0 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002374 282.0
YHH3_k127_9987502_1 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001802 250.0
YHH3_k127_9987502_2 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000001511 211.0
YHH3_k127_9987502_3 Biopolymer transport protein K03559 - - 0.0000000000000000000000000000000000213 139.0
YHH3_k127_9990474_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 2.258e-289 899.0
YHH3_k127_9990474_1 ABC transporter transmembrane region K06147 - - 2.489e-241 764.0
YHH3_k127_9990474_2 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000004137 200.0
YHH3_k127_9990474_3 Regulatory protein, FmdB family - - - 0.0000000000000000000000000005092 116.0
YHH3_k127_999289_0 Bacterial transglutaminase-like N-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008297 422.0
YHH3_k127_999289_1 Site-specific recombinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 415.0
YHH3_k127_999289_2 Transcriptional regulator, LysR K10918,K18900 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000296 347.0
YHH3_k127_999289_3 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity K01118 - - 0.0000000000000000000000000000000000000000000000000000000000004277 218.0
YHH3_k127_999289_4 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000001346 177.0