Overview

ID MAG04593
Name YHH3_bin.65
Sample SMP0123
Taxonomy
Kingdom Bacteria
Phylum Omnitrophota
Class Koll11
Order Velamenicoccales
Family Velamenicoccaceae
Genus
Species
Assembly information
Completeness (%) 59.12
Contamination (%) 1.68
GC content (%) 52.0
N50 (bp) 4,398
Genome size (bp) 1,180,202

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1091

Gene name Description KEGG GOs EC E-value Score Sequence
YHH3_k127_10024047_0 hexose biosynthetic process K01810 - 5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 535.0
YHH3_k127_10024047_1 part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006,K16787 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 336.0
YHH3_k127_10024047_2 cobalt ABC transporter, inner membrane subunit CbiQ K02008 - - 0.000000000006072 68.0
YHH3_k127_1004405_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 505.0
YHH3_k127_1004405_1 Belongs to the peptidase M16 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009047 314.0
YHH3_k127_1004405_2 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000414 170.0
YHH3_k127_1004405_3 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000008627 117.0
YHH3_k127_1004405_4 - - - - 0.000000000018 65.0
YHH3_k127_1005087_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 389.0
YHH3_k127_1005087_1 Acyl-homoserine-lactone synthase - - - 0.000000000000000000000000000000000000000000000000002815 191.0
YHH3_k127_1005087_2 Outer membrane lipoprotein-sorting protein - - - 0.000005947 51.0
YHH3_k127_10052032_0 PFAM Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004779 376.0
YHH3_k127_10052032_1 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005654 300.0
YHH3_k127_10052032_2 Dehydrogenase E1 component K00161,K21416 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 293.0
YHH3_k127_10052032_3 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002101 239.0
YHH3_k127_10103170_0 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000091 409.0
YHH3_k127_10103170_1 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003239 274.0
YHH3_k127_10103170_2 TIGRFAM pyruvate ketoisovalerate oxidoreductase, gamma subunit K00172 - 1.2.7.1 0.00000000000000000000000000000000000000000001438 168.0
YHH3_k127_10103170_3 Ferric uptake regulator, Fur family K09825 - - 0.000000000000000000000000000000002383 133.0
YHH3_k127_10103170_4 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00171,K00172,K18358 - 1.2.1.58,1.2.7.1 0.0000000000000000009461 89.0
YHH3_k127_10156252_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 424.0
YHH3_k127_10156252_1 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000296 173.0
YHH3_k127_10156252_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000002444 79.0
YHH3_k127_10157846_0 secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007032 331.0
YHH3_k127_10157846_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000003375 222.0
YHH3_k127_10157846_2 FIST C domain - - - 0.0000000000000000000000000000000000007969 154.0
YHH3_k127_10226050_0 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000786 391.0
YHH3_k127_10226050_1 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 364.0
YHH3_k127_10226050_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01485,K11991 GO:0002097,GO:0002100,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 3.5.4.1,3.5.4.33 0.00000000000000000000000000000000000000000000000003178 183.0
YHH3_k127_10226050_3 regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed - - - 0.00001182 53.0
YHH3_k127_10226050_4 - - - - 0.00002314 47.0
YHH3_k127_10247874_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 9.96e-240 753.0
YHH3_k127_10247874_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit K02118 - - 2.091e-211 666.0
YHH3_k127_10247874_2 Catalyzes the conversion of dihydroorotate to orotate with NAD( ) as electron acceptor K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 330.0
YHH3_k127_10247874_3 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) K02823 - - 0.000000000000000000000000000000000000000000000000000000000001888 217.0
YHH3_k127_10247874_4 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000000000001538 207.0
YHH3_k127_10247874_5 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.0000000000000000000000000000000000000000000000008279 181.0
YHH3_k127_10247874_6 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.00000000000000006251 89.0
YHH3_k127_10247874_7 Protein of unknown function (DUF2764) - - - 0.000000000000002219 83.0
YHH3_k127_10247874_8 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.0001486 49.0
YHH3_k127_10336772_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006426 280.0
YHH3_k127_10336772_1 Probable RNA and SrmB- binding site of polymerase A K00970 - 2.7.7.19 0.000000000000000000000000000000000002178 147.0
YHH3_k127_10336772_2 NUDIX domain K03574 - 3.6.1.55 0.00000000000000000000000000000000009342 143.0
YHH3_k127_10336990_0 Belongs to the PdxA family K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.000000000000000000000000000000000000000000000000000000002958 207.0
YHH3_k127_10336990_1 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000191 179.0
YHH3_k127_10336990_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000004278 107.0
YHH3_k127_10346847_0 general secretion pathway protein K02453 - - 0.00000000000000000000000000000002176 146.0
YHH3_k127_10346847_1 Tetratricopeptide TPR_2 repeat protein - - - 0.0000005997 59.0
YHH3_k127_10348607_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 404.0
YHH3_k127_10348607_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008098 293.0
YHH3_k127_10348607_2 Tetratricopeptide TPR_2 repeat protein K12600 - - 0.000000000000000000000000000000000000002727 157.0
YHH3_k127_10348607_3 NAD dependent epimerase dehydratase - - - 0.0000000000000000000000000000002752 133.0
YHH3_k127_10354901_0 2 iron, 2 sulfur cluster binding K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004385 484.0
YHH3_k127_10354901_1 Sulfate permease family K01673,K03321 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 404.0
YHH3_k127_10361017_0 C-terminal, D2-small domain, of ClpB protein K03696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000605 409.0
YHH3_k127_10361017_1 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002346 284.0
YHH3_k127_10361017_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000009628 222.0
YHH3_k127_10361017_3 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000004609 208.0
YHH3_k127_10361017_4 MlaD protein K02067 - - 0.000000000000000000003214 102.0
YHH3_k127_10502169_0 Anticodon-binding domain of tRNA K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009303 540.0
YHH3_k127_10502169_1 Stage 0 sporulation protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001286 278.0
YHH3_k127_10502169_2 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000002386 204.0
YHH3_k127_10502169_3 TIGRFAM DNA polymerase III, delta K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000001562 192.0
YHH3_k127_10573405_0 - - - - 0.0000000000000000000103 105.0
YHH3_k127_10645270_0 Transporter associated domain - - - 0.0000000000000000000000000000000000000000000000000000008553 203.0
YHH3_k127_10645270_1 YGGT family K02221 - - 0.000000000000000000000001299 108.0
YHH3_k127_10743052_0 SMART Elongator protein 3 MiaB NifB K04034 - 1.21.98.3 0.00000000000000000000000000000000000000000000000001844 195.0
YHH3_k127_10743052_1 amidohydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000003191 139.0
YHH3_k127_10785800_0 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 315.0
YHH3_k127_10785800_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 300.0
YHH3_k127_10785800_2 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000312 142.0
YHH3_k127_10787697_0 NeuB family K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003325 416.0
YHH3_k127_10787697_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 GO:0003674,GO:0003824,GO:0008110,GO:0008483,GO:0016740,GO:0016769 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006815 351.0
YHH3_k127_10787697_2 Prephenate dehydratase K00661,K01713,K04092,K04093,K04516,K04518,K14170,K14187 GO:0003674,GO:0003824,GO:0004106,GO:0004664,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006558,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0017144,GO:0019438,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 1.3.1.12,2.3.1.79,4.2.1.51,4.2.1.91,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000005358 266.0
YHH3_k127_10787697_3 prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000001423 71.0
YHH3_k127_10912271_0 Predicted membrane protein (DUF2207) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 401.0
YHH3_k127_10912271_1 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008471 291.0
YHH3_k127_10912271_2 PFAM LemA family K03744 - - 0.000000000000000000000000000000000000000000000000005052 188.0
YHH3_k127_10929095_0 glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004833 537.0
YHH3_k127_10929095_1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K00528,K16951 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007273 289.0
YHH3_k127_10929095_2 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000000000000000000000000699 210.0
YHH3_k127_10929095_3 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000008012 204.0
YHH3_k127_10929095_4 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.0000000000000000000000000000000000000009557 159.0
YHH3_k127_10929095_5 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000001161 66.0
YHH3_k127_10972290_0 Belongs to the peptidase S8 family K03561,K12287,K20276 - - 0.00000000008056 75.0
YHH3_k127_11024899_0 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 343.0
YHH3_k127_11024899_1 hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008239 314.0
YHH3_k127_11024899_2 Belongs to the HypD family K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009716 246.0
YHH3_k127_11024899_3 Hydrogenase/urease nickel incorporation, metallochaperone, hypA - - - 0.00001376 51.0
YHH3_k127_11024899_4 Oxidoreductase FAD-binding domain - - - 0.00008963 47.0
YHH3_k127_11148048_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 581.0
YHH3_k127_11148048_1 phosphoglycerate mutase K15635 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006343 472.0
YHH3_k127_11148048_2 - - - - 0.000000000000000000000000000000000000000000000000002436 190.0
YHH3_k127_11148048_3 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000005046 177.0
YHH3_k127_11148048_4 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.00006618 55.0
YHH3_k127_11270157_0 Calcineurin-like phosphoesterase - - - 0.00000000001216 81.0
YHH3_k127_11270157_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.00000000003642 79.0
YHH3_k127_11319352_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 496.0
YHH3_k127_11319352_1 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000004382 184.0
YHH3_k127_11319352_2 Predicted permease K07089 - - 0.00000000000000000000000000000000000000000008884 171.0
YHH3_k127_11319352_3 TIGRFAM TIGR00268 family protein K06864 - - 0.000000000000000000000000000000203 128.0
YHH3_k127_11452853_0 XanTHIne and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.000000000000000000000000000000000000000006438 161.0
YHH3_k127_11452853_1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.0000000000000000000000000000485 127.0
YHH3_k127_11461378_0 Nucleotidyl transferase K00978 - 2.7.7.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 374.0
YHH3_k127_11461378_1 Pilus assembly protein, PilO K02664 - - 0.0004815 49.0
YHH3_k127_11502011_0 TIGRFAM Ammonium transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 544.0
YHH3_k127_11502011_1 Ammonium Transporter Family K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 393.0
YHH3_k127_11502011_2 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000338 263.0
YHH3_k127_11502011_3 Belongs to the P(II) protein family K04751,K04752 - - 0.0000000000000000000000000000000000000000004106 161.0
YHH3_k127_11502011_4 Nitrogen regulatory protein P-II - - - 0.00000000000000000000000000000000000000006599 153.0
YHH3_k127_11606398_0 Glycosyltransferase 36 associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000224 254.0
YHH3_k127_11606398_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000002051 198.0
YHH3_k127_11623200_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000001094 87.0
YHH3_k127_11623200_1 HD domain - - - 0.000000001982 64.0
YHH3_k127_11623200_2 protein trimerization K08309 - - 0.0001128 53.0
YHH3_k127_11687836_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006369 383.0
YHH3_k127_11687836_1 beta-galactosidase activity - - - 0.00000000000000000000000000000000000001457 160.0
YHH3_k127_11687836_2 Cupin domain K11312 - - 0.00000000000000000000000000009594 118.0
YHH3_k127_11727301_0 ABC transporter K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 376.0
YHH3_k127_11727301_1 Transcriptional regulator sugar kinase K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000004315 207.0
YHH3_k127_11727301_2 Organic solvent tolerance protein OstA - - - 0.00000000006745 74.0
YHH3_k127_11749373_0 HI0933-like protein K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002128 255.0
YHH3_k127_11749373_1 Maf-like protein K06287 - - 0.000000000000000000000000000000000000001732 158.0
YHH3_k127_11775464_0 regulation of ruffle assembly - - - 0.00000000000000000000000000000000000000000000007315 175.0
YHH3_k127_11775464_1 Involved in the tonB-independent uptake of proteins - - - 0.0000000001489 73.0
YHH3_k127_11790847_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 1.882e-203 661.0
YHH3_k127_11790847_1 CO dehydrogenase acetyl-CoA synthase complex beta subunit K14138 - 2.3.1.169 4.326e-201 649.0
YHH3_k127_11790847_10 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000002447 99.0
YHH3_k127_11790847_11 TPR repeat - - - 0.000000000001128 78.0
YHH3_k127_11790847_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.54e-198 626.0
YHH3_k127_11790847_3 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0000271,GO:0003674,GO:0003824,GO:0004373,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 409.0
YHH3_k127_11790847_4 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934 363.0
YHH3_k127_11790847_5 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003294 311.0
YHH3_k127_11790847_6 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.000000000000000000000000000000000000000000000000000008181 199.0
YHH3_k127_11790847_7 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000003279 168.0
YHH3_k127_11790847_8 Binds the 23S rRNA K02909 - - 0.00000000000000000000000008406 108.0
YHH3_k127_11790847_9 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000000000000000000000004115 110.0
YHH3_k127_11831212_0 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 301.0
YHH3_k127_11831212_1 MlaD protein K06192 - - 0.000000000000000000000000000000000000000000000000009132 189.0
YHH3_k127_11831212_2 ABC-type transport auxiliary lipoprotein component K09857 - - 0.000000000000000000000000006441 118.0
YHH3_k127_11831212_3 Permease MlaE K02066 - - 0.00000000001125 66.0
YHH3_k127_11831212_4 PFAM Radical SAM - - - 0.000404 47.0
YHH3_k127_11857121_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008469 387.0
YHH3_k127_11857121_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007397 345.0
YHH3_k127_11857121_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 338.0
YHH3_k127_11857121_3 TIGRFAM stage V sporulation protein E, cell division protein FtsW K03588 - - 0.0000000001151 65.0
YHH3_k127_11938525_0 Acyl-transferase K02517 - 2.3.1.241 0.00000000112 68.0
YHH3_k127_11938525_1 PFAM NADPH-dependent FMN reductase - - - 0.0004784 51.0
YHH3_k127_11963451_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004968 534.0
YHH3_k127_11963451_1 Phosphate starvation protein PhoH K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004127 319.0
YHH3_k127_11963451_2 7TM receptor with intracellular HD hydrolase K07037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009679 272.0
YHH3_k127_11963451_3 peptidoglycan-binding protein, lysm - - - 0.0000000001465 71.0
YHH3_k127_11969000_0 - K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 378.0
YHH3_k127_11969000_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09697 - 3.6.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000002154 266.0
YHH3_k127_1203016_0 Glycosyl transferase family 2 K11936,K14666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003728 392.0
YHH3_k127_1203016_1 ThiF family K22132 - - 0.00000000000000000000000000000000000000000000000000000000000000001917 231.0
YHH3_k127_1203016_2 Deoxyribonuclease K03424 - - 0.000000000000000000000000000000000000000005907 164.0
YHH3_k127_1203016_3 base-excision repair K03575 - - 0.0000000000000000000000000000000002203 138.0
YHH3_k127_1203016_4 Belongs to the NqrB RnfD family - - - 0.000000000003752 76.0
YHH3_k127_12037075_0 cheY-homologous receiver domain K07658 - - 0.000000000000000000000000000000001192 133.0
YHH3_k127_12037075_1 - - - - 0.00000000000000000008989 91.0
YHH3_k127_12037075_2 SMART Elongator protein 3 MiaB NifB K01012 - 2.8.1.6 0.0000000000000000136 84.0
YHH3_k127_12051036_0 UDP binding domain K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003971 489.0
YHH3_k127_12051036_1 PFAM NAD-dependent epimerase dehydratase K01710,K08678 - 4.1.1.35,4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003526 441.0
YHH3_k127_12051036_10 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000001875 64.0
YHH3_k127_12051036_11 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000001661 67.0
YHH3_k127_12051036_12 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00002911 49.0
YHH3_k127_12051036_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000027,GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006417,GO:0006446,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0017148,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045947,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003155 273.0
YHH3_k127_12051036_3 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000001998 210.0
YHH3_k127_12051036_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000001005 199.0
YHH3_k127_12051036_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000007679 151.0
YHH3_k127_12051036_6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.00000000000000000000000000000000042 135.0
YHH3_k127_12051036_7 metal-dependent phosphoesterases (PHP family) - - - 0.000000000000000000000000000222 123.0
YHH3_k127_12051036_8 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000004391 111.0
YHH3_k127_12051036_9 deacetylase - - - 0.00000000000000000000001089 114.0
YHH3_k127_12066914_0 - K01992 - - 0.0000000000000000000000000000000000000108 158.0
YHH3_k127_12155591_0 Involved in the biosynthesis of porphyrin-containing compound - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000004358 252.0
YHH3_k127_12155591_1 Ppx GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000005206 236.0
YHH3_k127_12165167_0 Transposase IS200 like K07491 - - 0.000000000000001111 89.0
YHH3_k127_12168009_0 Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000003966 243.0
YHH3_k127_12168009_1 HD domain - - - 0.000000000000000000000000000000000000006113 162.0
YHH3_k127_12168009_2 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000658 130.0
YHH3_k127_12168009_3 - - - - 0.0000000000000004236 89.0
YHH3_k127_12168009_4 - - - - 0.0000000001748 73.0
YHH3_k127_12168009_5 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.000000005624 61.0
YHH3_k127_12168009_6 Putative zinc- or iron-chelating domain - - - 0.00004644 54.0
YHH3_k127_1218291_0 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000003002 252.0
YHH3_k127_1218291_1 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000002633 169.0
YHH3_k127_1218291_2 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000000000000000000000004492 138.0
YHH3_k127_1218291_3 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000001297 136.0
YHH3_k127_1218291_4 TIGRFAM hydro-lyases, Fe-S type, tartrate fumarate subfamily, alpha region K01677 - 4.2.1.2 0.0000000000000000000000000000000005449 135.0
YHH3_k127_1218291_5 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000007491 133.0
YHH3_k127_12186723_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000008736 232.0
YHH3_k127_12186723_1 ComF family K02242 - - 0.000000000000000000000000005934 119.0
YHH3_k127_12186723_2 Permease YjgP YjgQ family protein K07091,K11720 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000009735 117.0
YHH3_k127_12257943_0 RNA binding S1 domain protein K06959 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 464.0
YHH3_k127_12257943_1 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003644 285.0
YHH3_k127_12257943_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000004907 153.0
YHH3_k127_12257943_3 Hsp20/alpha crystallin family - - - 0.00000000000008061 76.0
YHH3_k127_12257943_4 Transcriptional regulator K13640 - - 0.0000002911 56.0
YHH3_k127_12313527_0 Belongs to the alpha-IPM synthase homocitrate synthase family K02594 - 2.3.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 555.0
YHH3_k127_12317499_0 NUBPL iron-transfer P-loop NTPase K16554 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 304.0
YHH3_k127_12317499_1 O-Antigen ligase K02847,K13009 - - 0.000000000000000000000000000000000000000000007061 176.0
YHH3_k127_12356145_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008452 467.0
YHH3_k127_12356145_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004446 346.0
YHH3_k127_12356145_2 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007935 284.0
YHH3_k127_12356145_3 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.000000000000000000000000000000000000000000000000009341 186.0
YHH3_k127_12356145_4 Ribulose-phosphate 3 epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.000000000000000000000000000000000001803 141.0
YHH3_k127_12356145_5 rRNA binding K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000001898 68.0
YHH3_k127_12429495_0 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000002298 258.0
YHH3_k127_12429495_1 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.000000000000000000000000000000000000000000000000000000000000005735 226.0
YHH3_k127_12442732_0 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000001452 214.0
YHH3_k127_12442732_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000002032 153.0
YHH3_k127_12442732_2 protein family UPF0079, ATPase K06925 - - 0.00000000000000000000000000000002087 132.0
YHH3_k127_12442732_3 PFAM Peptidase M22, glycoprotease K01409,K14742 - 2.3.1.234 0.00000000000000000000004207 109.0
YHH3_k127_12442732_4 Initiation factor 2 subunit family K08963 - 5.3.1.23 0.000000000000004737 76.0
YHH3_k127_12596098_0 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000007175 255.0
YHH3_k127_12596098_1 Pterin binding enzyme K00796,K18824 GO:0003674,GO:0003824,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000003674 238.0
YHH3_k127_12596098_2 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 GO:0003674,GO:0003824,GO:0004016,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009975,GO:0016020,GO:0016021,GO:0016829,GO:0016849,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 2.7.7.85 0.0000000000000000000000000000000000000000000000000000007816 201.0
YHH3_k127_126188_0 Polyprenyl synthetase K02523,K13787 GO:0003674,GO:0003824,GO:0004659,GO:0016740,GO:0016765 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.000000000000000000000000000000000000000000000002819 186.0
YHH3_k127_126188_1 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.000000000000000000000000000000000000000001361 168.0
YHH3_k127_126188_2 Psort location CytoplasmicMembrane, score 10.00 K07052 - - 0.00000000000000000000000000000000000000002349 160.0
YHH3_k127_126188_3 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000007475 148.0
YHH3_k127_126188_4 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.00000000000006072 76.0
YHH3_k127_12621814_0 Heat shock 70 kDa protein K04043 - - 7.879e-261 816.0
YHH3_k127_12621814_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0000988,GO:0000989,GO:0003674,GO:0003756,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006457,GO:0006458,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010556,GO:0015035,GO:0015036,GO:0016020,GO:0016032,GO:0016043,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0016989,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031326,GO:0032991,GO:0034641,GO:0034645,GO:0042026,GO:0043167,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051704,GO:0055114,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0140096,GO:0140110,GO:1901360,GO:1901576,GO:1903506,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 296.0
YHH3_k127_12669047_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 398.0
YHH3_k127_12669047_1 Cell wall formation K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000004162 259.0
YHH3_k127_12669047_2 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000943 253.0
YHH3_k127_12669047_3 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000287 190.0
YHH3_k127_12669047_4 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0030554,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000142 186.0
YHH3_k127_12669047_5 Glycosyltransferase family 28 N-terminal domain K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000857 182.0
YHH3_k127_12669047_6 Peptidase MA superfamily - - - 0.000000003596 67.0
YHH3_k127_12669047_7 Cell division protein FtsQ K03589 - - 0.000000004568 66.0
YHH3_k127_12787593_0 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009586 323.0
YHH3_k127_12787593_1 PilT protein domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003287 269.0
YHH3_k127_12787593_2 TIGRFAM Serine O-acetyltransferase K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000006049 241.0
YHH3_k127_12857755_0 Belongs to the aldehyde dehydrogenase family K00128,K00130,K00146,K10217 - 1.2.1.3,1.2.1.32,1.2.1.39,1.2.1.8,1.2.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 467.0
YHH3_k127_12857755_1 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000004866 223.0
YHH3_k127_12857755_2 Aldolase K01628 - 4.1.2.17 0.0000003092 61.0
YHH3_k127_12857755_3 Monoamine oxidase K00274 - 1.4.3.4 0.0002427 46.0
YHH3_k127_12873820_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002103 287.0
YHH3_k127_12873820_1 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000138 150.0
YHH3_k127_12873820_2 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000004606 97.0
YHH3_k127_12873820_3 - - - - 0.0000000000000006372 78.0
YHH3_k127_12873820_4 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000002483 66.0
YHH3_k127_130386_0 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 338.0
YHH3_k127_130386_1 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 293.0
YHH3_k127_130386_2 TIGRFAM hydro-lyase, Fe-S type, tartrate fumarate subfamily, beta subunit K01678 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000006229 216.0
YHH3_k127_130386_3 Fumarate hydratase (Fumerase) K01677 - 4.2.1.2 0.0000000000000000000000000000000000000000007055 160.0
YHH3_k127_1343187_0 Belongs to the DEAD box helicase family K05592,K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 416.0
YHH3_k127_1343187_1 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000001243 202.0
YHH3_k127_1343187_2 AsmA-like C-terminal region K07289 - - 0.0000000000142 76.0
YHH3_k127_1401775_0 4-alpha-glucanotransferase - - - 0.00000001148 70.0
YHH3_k127_1401775_1 TIGRFAM HAD-superfamily hydrolase subfamily IA, variant 3 K07025 - - 0.0000002363 65.0
YHH3_k127_1477902_0 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 5.434e-235 738.0
YHH3_k127_1477902_1 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 7.77e-235 738.0
YHH3_k127_1477902_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006513 562.0
YHH3_k127_1477902_3 Fructose-bisphosphate aldolase class-II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 473.0
YHH3_k127_1477902_4 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 441.0
YHH3_k127_1477902_5 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02236,K02278,K02506,K02654,K10966 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000002867 249.0
YHH3_k127_1477902_6 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000001636 232.0
YHH3_k127_1477902_7 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000000000001198 185.0
YHH3_k127_1477902_8 ACT domain K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.0000000000000000000000000000000000002675 145.0
YHH3_k127_1558067_0 Belongs to the RtcB family K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003688 594.0
YHH3_k127_1558067_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 523.0
YHH3_k127_1558067_3 Membrane K08981 - - 0.00000479 55.0
YHH3_k127_1581397_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1078.0
YHH3_k127_1581397_1 tRNA synthetase class II core domain (G, H, P, S and T) K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 375.0
YHH3_k127_1581397_2 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000000009379 105.0
YHH3_k127_1581397_3 Belongs to the bacterial histone-like protein family K03530,K05788 - - 0.000000000000000000002753 95.0
YHH3_k127_1913799_0 Actin K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 487.0
YHH3_k127_1913799_1 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008918 358.0
YHH3_k127_1913799_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000051 340.0
YHH3_k127_1913799_3 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000003546 272.0
YHH3_k127_1913799_4 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000004631 169.0
YHH3_k127_1913799_5 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000003308 121.0
YHH3_k127_1973040_0 AAA ATPase, central domain protein K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007542 475.0
YHH3_k127_1973040_1 Methylene-tetrahydrofolate reductase C terminal - - - 0.0000000000000000000000000000000000000000000000000001393 193.0
YHH3_k127_1973040_2 Fe-S iron-sulfur cluster assembly protein, NifU family K04488 - - 0.000000000000000000000000000000000000000000000000001345 185.0
YHH3_k127_1973040_3 PFAM 5-formyltetrahydrofolate cyclo-ligase K01934 - 6.3.3.2 0.000000000000000000000000000002377 128.0
YHH3_k127_1973040_4 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000002064 80.0
YHH3_k127_2002620_0 electron transport complex, RnfABCDGE type, B subunit K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000005577 237.0
YHH3_k127_2002620_1 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000001369 209.0
YHH3_k127_2002620_2 Peptidase family M41 K03798 - - 0.000000000000000000000000000000000000000000003354 174.0
YHH3_k127_2008747_0 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002619 266.0
YHH3_k127_2008747_1 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000001727 203.0
YHH3_k127_2008747_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000004442 175.0
YHH3_k127_2008747_3 protein (ATP-grasp superfamily) K07159 - - 0.000000000000000000000000000000000000000003755 168.0
YHH3_k127_2008747_4 Haloacid dehalogenase-like hydrolase K07025,K20866 - 3.1.3.10 0.00000000000000000000000629 109.0
YHH3_k127_2009092_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000002581 137.0
YHH3_k127_2009092_1 polysaccharide export K01991 - - 0.00000000000000000615 94.0
YHH3_k127_2009092_2 Chain length determinant protein - - - 0.0000000002806 71.0
YHH3_k127_2009092_3 regulatory protein, MerR - - - 0.0008835 45.0
YHH3_k127_2029139_0 PFAM Aminotransferase class I and II K00812,K10907 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008332 434.0
YHH3_k127_2029139_1 glutamine synthetase K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000009946 226.0
YHH3_k127_2029139_2 transcriptional regulator, AsnC family - - - 0.000000000000000000000000000000000000000004037 159.0
YHH3_k127_2053914_0 CO dehydrogenase/acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 383.0
YHH3_k127_2053914_1 Domain of unknown function (DUF4445) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 354.0
YHH3_k127_2053914_2 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K06898,K09121 - 4.99.1.12 0.00000000000000000000000000000001015 131.0
YHH3_k127_2061679_0 PFAM UDP-glucose GDP-mannose dehydrogenase family, NAD binding domain K02472,K13015 - 1.1.1.136,1.1.1.336 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 519.0
YHH3_k127_2061679_1 Mannose-6-phosphate isomerase, type K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002981 401.0
YHH3_k127_2079994_0 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 296.0
YHH3_k127_2079994_1 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000001778 225.0
YHH3_k127_2079994_2 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000345 180.0
YHH3_k127_2079994_3 Radical SAM domain protein - - - 0.00000000000000000001721 91.0
YHH3_k127_2079994_4 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.00000000000001139 86.0
YHH3_k127_2079994_5 Kdo2-lipid A biosynthetic process K02517,K22311 - 2.3.1.241,2.3.1.265 0.0000005975 53.0
YHH3_k127_2123247_0 AAA domain K02450 - - 0.000000000000000000000001059 106.0
YHH3_k127_2123247_1 Type II secretion system (T2SS), protein K - - - 0.0009112 51.0
YHH3_k127_2145003_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 321.0
YHH3_k127_2145003_1 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000001346 240.0
YHH3_k127_2154752_0 type IV pilus secretin PilQ K02666 - - 0.000000000001768 79.0
YHH3_k127_2255356_0 phenylalanyl-tRNA synthetase (beta subunit) K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 337.0
YHH3_k127_2255356_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.000000000000000000000000000000002688 129.0
YHH3_k127_2262240_0 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000001492 256.0
YHH3_k127_2262240_1 Patatin-like phospholipase K01999,K07001 - - 0.00000000000000000000000000000000000000000000000000000001542 221.0
YHH3_k127_2262240_2 protein histidine kinase activity - - - 0.0000000000000000000000000000000000000000000000000008385 196.0
YHH3_k127_2262240_3 diguanylate cyclase - - - 0.0000000000000000000001867 102.0
YHH3_k127_2284365_0 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001615 265.0
YHH3_k127_2284365_1 Cupin domain - - - 0.000000000000000000000000000000001046 132.0
YHH3_k127_2284365_2 Nitric oxide reductase large subunit K04561 - 1.7.2.5 0.00001053 49.0
YHH3_k127_2308005_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 328.0
YHH3_k127_2308005_1 Aminotransferase K00812 - 2.6.1.1 0.000000000000000000000002494 103.0
YHH3_k127_2308005_2 Ribosomal protein L17 K02879,K16193 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000004595 102.0
YHH3_k127_2308005_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000001628 65.0
YHH3_k127_2340802_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.233e-207 666.0
YHH3_k127_2340802_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 370.0
YHH3_k127_2340802_2 TIGRFAM DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009453 311.0
YHH3_k127_2340802_3 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000005061 166.0
YHH3_k127_2340802_4 Belongs to the 'phage' integrase family K03733 - - 0.0000000000000000000008328 100.0
YHH3_k127_2348487_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000171 238.0
YHH3_k127_2532800_0 flp pilus assembly protein K12510 - - 0.00000000000000000000000000000000000007494 151.0
YHH3_k127_2532800_1 Type II secretion system (T2SS), protein F K12511 - - 0.0000000000000000000000000000000009349 141.0
YHH3_k127_2541435_0 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007871 355.0
YHH3_k127_2541435_1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.000000000000000000000000000004194 123.0
YHH3_k127_2541435_2 PFAM DAHP synthetase I KDSA K01627 - 2.5.1.55 0.000000000000000739 78.0
YHH3_k127_2560626_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004015 299.0
YHH3_k127_2560626_1 NAD dependent epimerase dehydratase family K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000001329 197.0
YHH3_k127_2577712_0 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000669 187.0
YHH3_k127_2577712_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000005507 189.0
YHH3_k127_2577712_2 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000002003 143.0
YHH3_k127_2685577_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 325.0
YHH3_k127_2685577_1 PFAM Poly A polymerase head domain K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000009957 105.0
YHH3_k127_2685577_2 tRNA nucleotidyltransferase poly(A) polymerase K00970 - 2.7.7.19 0.0000007365 52.0
YHH3_k127_2714066_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008963 397.0
YHH3_k127_2714066_1 ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 387.0
YHH3_k127_2714066_2 thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 325.0
YHH3_k127_2714066_3 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT K02669 - - 0.0000000000000000000000000000000000000000000000000000000001304 216.0
YHH3_k127_2714066_4 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate family K00177 - 1.2.7.3 0.000000000000000000000000000000000000003845 152.0
YHH3_k127_2714066_5 PFAM 4Fe-4S K00176 - 1.2.7.3 0.0000000000000000004848 88.0
YHH3_k127_2714066_6 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.000001328 51.0
YHH3_k127_2761763_0 Saccharopine dehydrogenase K00290 - 1.5.1.7 5.615e-221 695.0
YHH3_k127_2761763_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 361.0
YHH3_k127_2761763_2 carboxynorspermidine decarboxylase K13747 - 4.1.1.96 0.0000000000000000000000000000000000000000000000000001474 188.0
YHH3_k127_2761763_3 S-adenosylmethionine decarboxylase K01611 - 4.1.1.50 0.0000000000000000000000000005497 119.0
YHH3_k127_284199_0 Aminotransferase class I and II K10206 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 458.0
YHH3_k127_284199_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000884 292.0
YHH3_k127_284199_2 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.00000000000000000000000000000000000000000000000000004689 197.0
YHH3_k127_284199_3 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000000000007541 133.0
YHH3_k127_284199_4 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000001558 87.0
YHH3_k127_284199_5 positive regulation of macromolecule biosynthetic process K03973 - - 0.0000000000001412 73.0
YHH3_k127_284199_6 - - - - 0.000000001074 62.0
YHH3_k127_289055_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 500.0
YHH3_k127_289055_1 Carbohydrate phosphorylase K00688 - 2.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 377.0
YHH3_k127_289055_2 AAA domain K02450 - - 0.00000000000000000000000000000000000000000000000000000000000001064 227.0
YHH3_k127_289055_3 Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000000005539 199.0
YHH3_k127_289055_4 type IV pilus secretin PilQ K02666 - - 0.000002556 55.0
YHH3_k127_2921154_0 Peptidase family M1 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001502 271.0
YHH3_k127_2937191_0 Adenosine specific kinase K09129 - - 0.0000000000000000000000000000000000000000000000000000000000000001641 224.0
YHH3_k127_2937191_1 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000002869 172.0
YHH3_k127_2941818_0 SPFH Band 7 PHB domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 432.0
YHH3_k127_2941818_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000004786 247.0
YHH3_k127_2941818_10 Flavin containing amine oxidoreductase K01854 - 5.4.99.9 0.0004566 43.0
YHH3_k127_2941818_2 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000004154 223.0
YHH3_k127_2941818_3 Squalene phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000003349 213.0
YHH3_k127_2941818_4 - - - - 0.000000000000000000000000000000000000000004347 164.0
YHH3_k127_2941818_5 - - - - 0.000000000000000000000001933 107.0
YHH3_k127_2941818_6 Heavy-metal-associated domain - - - 0.00000000000002565 77.0
YHH3_k127_2941818_7 Heavy-metal-associated domain - - - 0.00000004452 61.0
YHH3_k127_2941818_8 PFAM SH3 type 3 domain protein - - - 0.0000001897 53.0
YHH3_k127_3015021_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000009043 167.0
YHH3_k127_3015021_1 AMP catabolic process K19970 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006195,GO:0006196,GO:0006213,GO:0006259,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007155,GO:0007159,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008150,GO:0008152,GO:0008198,GO:0008252,GO:0008253,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009126,GO:0009128,GO:0009150,GO:0009154,GO:0009158,GO:0009161,GO:0009163,GO:0009164,GO:0009165,GO:0009166,GO:0009167,GO:0009169,GO:0009259,GO:0009261,GO:0009889,GO:0009891,GO:0009893,GO:0009986,GO:0009987,GO:0010035,GO:0010038,GO:0010044,GO:0016020,GO:0016021,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0018130,GO:0019216,GO:0019222,GO:0019362,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0022610,GO:0031224,GO:0031347,GO:0031348,GO:0031974,GO:0031981,GO:0032101,GO:0032102,GO:0032501,GO:0032502,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042221,GO:0042278,GO:0042451,GO:0042455,GO:0042578,GO:0042737,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044464,GO:0045202,GO:0045834,GO:0046033,GO:0046085,GO:0046086,GO:0046128,GO:0046129,GO:0046135,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046889,GO:0046890,GO:0046914,GO:0048513,GO:0048518,GO:0048519,GO:0048583,GO:0048585,GO:0048731,GO:0048856,GO:0050727,GO:0050728,GO:0050789,GO:0050896,GO:0051186,GO:0055086,GO:0060322,GO:0065007,GO:0070013,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0072523,GO:0072524,GO:0072527,GO:0072529,GO:0080090,GO:0080134,GO:0090304,GO:0090407,GO:0097060,GO:0098590,GO:0098609,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659 3.1.3.5 0.0000002107 64.0
YHH3_k127_3018324_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 1.809e-215 679.0
YHH3_k127_3018324_1 - - - - 0.0000000000000000000000003338 114.0
YHH3_k127_3045921_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000006166 211.0
YHH3_k127_3045921_1 Divergent polysaccharide deacetylase K09798 - - 0.0000000000000000000000000000000000000001815 163.0
YHH3_k127_3045921_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000000000005334 115.0
YHH3_k127_3048081_0 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K04085 - - 4.373e-255 797.0
YHH3_k127_3048081_1 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.00000000000000000000000000116 116.0
YHH3_k127_3170427_0 PFAM Radical SAM - - - 0.0000000000000000000000000000000004583 135.0
YHH3_k127_3170427_1 GGDEF domain K02488 - 2.7.7.65 0.0003316 52.0
YHH3_k127_3188504_0 Glycogen debranching enzyme - - - 0.000000000000009573 88.0
YHH3_k127_3200748_0 Phosphate acetyl/butaryl transferase K00625 - 2.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 449.0
YHH3_k127_3200748_1 - - - - 0.00000000000000000000000000000000000000000001342 168.0
YHH3_k127_3200748_2 Ion channel - - - 0.000000000000000000000000008287 118.0
YHH3_k127_3200748_3 - - - - 0.00000000000000000008568 97.0
YHH3_k127_3256524_0 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term K17108 - 3.2.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000007472 269.0
YHH3_k127_3256524_1 ROK family - - - 0.00000000004187 68.0
YHH3_k127_3260829_0 NADH dehydrogenase - - - 4.184e-251 787.0
YHH3_k127_3260829_1 iron-sulfur cluster assembly K00336,K18332 - 1.12.1.3,1.6.5.3 3.035e-198 636.0
YHH3_k127_3260829_2 Iron-only hydrogenase maturation rSAM protein HydG K03150 - 4.1.99.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 450.0
YHH3_k127_3260829_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 331.0
YHH3_k127_3260829_4 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.0000000000000000000000000000000000000000000000000000000000000006156 226.0
YHH3_k127_3260829_5 Thioredoxin-like [2Fe-2S] ferredoxin - - - 0.00000000000000000000000000000000000000000000001173 176.0
YHH3_k127_3260829_6 Ferredoxin K00335,K17992 - 1.12.1.3,1.6.5.3 0.000000000000000000000000000000000000000002075 158.0
YHH3_k127_3337028_0 PFAM DNA alkylation repair enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002002 257.0
YHH3_k127_3337028_1 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription K12410 - - 0.0000000000000000000000000000000000000000000000000000007225 203.0
YHH3_k127_3337028_2 Belongs to the thioredoxin family K03671 - - 0.000000000002403 72.0
YHH3_k127_3345936_0 Glycosyltransferase 36 associated - - - 6.7e-199 642.0
YHH3_k127_3345936_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00006996 53.0
YHH3_k127_3363812_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000003652 245.0
YHH3_k127_3385158_0 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000004953 201.0
YHH3_k127_3385158_1 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.0000000000000000000000000000000007118 139.0
YHH3_k127_3385158_2 DNA polymerase alpha chain like domain - - - 0.00000000000000001546 84.0
YHH3_k127_3396291_0 PFAM ATP-binding region, ATPase domain protein K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 322.0
YHH3_k127_3396291_1 TIGRFAM phosphate binding protein K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005872 309.0
YHH3_k127_3396291_2 Two component transcriptional regulator, winged helix family K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002337 270.0
YHH3_k127_3396291_3 Putative porin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004355 254.0
YHH3_k127_3396291_4 antisigma factor binding K02066,K04749 - - 0.000000000000000000007392 95.0
YHH3_k127_3396291_5 - K07283 - - 0.00000000001762 75.0
YHH3_k127_34279_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 7.088e-237 752.0
YHH3_k127_3471437_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 1.294e-226 721.0
YHH3_k127_3471437_1 DNA segregation ATPase FtsK SpoIIIE K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 543.0
YHH3_k127_3471437_2 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000007609 113.0
YHH3_k127_3484927_0 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 2.218e-222 695.0
YHH3_k127_3484927_1 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 518.0
YHH3_k127_3484927_2 cysteine synthase K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 447.0
YHH3_k127_3484927_3 TIGRFAM methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000234 248.0
YHH3_k127_3484927_4 TIGRFAM transcriptional regulator, Rrf2 family - - - 0.00000000000000000000001098 105.0
YHH3_k127_3484927_5 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000001305 96.0
YHH3_k127_3484927_6 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.0000000000007826 70.0
YHH3_k127_3523366_0 4Fe-4S single cluster domain K22227 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006448 417.0
YHH3_k127_3523366_1 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 411.0
YHH3_k127_3523366_2 alpha-L-arabinofuranosidase K01209 - 3.2.1.55 0.00006582 50.0
YHH3_k127_3565382_0 Belongs to the ClpA ClpB family K03696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006743 436.0
YHH3_k127_3565382_1 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000001244 255.0
YHH3_k127_3565382_2 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.00000000000000000000000000000000000000000000000000000007966 199.0
YHH3_k127_3570273_0 PFAM fumarate lyase K01744 - 4.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 576.0
YHH3_k127_3570273_1 TIGRFAM Small GTP-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 442.0
YHH3_k127_3624695_0 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 371.0
YHH3_k127_3624695_1 Tetratricopeptide repeat - - - 0.0000000000000000000000002382 117.0
YHH3_k127_3624695_2 PFAM Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.000000000000000000006285 93.0
YHH3_k127_3625796_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 1.713e-207 662.0
YHH3_k127_3625796_1 Glycosyl transferase family 21 K03669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006853 568.0
YHH3_k127_3625796_2 periplasmic glucan biosynthesis protein K03670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006508 494.0
YHH3_k127_3625796_3 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000002008 184.0
YHH3_k127_3625796_4 Belongs to the DEAD box helicase family K05591 GO:0000027,GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033677,GO:0034458,GO:0034459,GO:0034622,GO:0034641,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065003,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:0140098,GO:1901265,GO:1901360,GO:1901363 3.6.4.13 0.000001289 52.0
YHH3_k127_3642908_0 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009336 608.0
YHH3_k127_3642908_1 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 358.0
YHH3_k127_3642908_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 301.0
YHH3_k127_3642908_3 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000003173 86.0
YHH3_k127_3642908_4 PFAM Preprotein translocase SecG subunit K03075 - - 0.00002172 53.0
YHH3_k127_374514_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K02652 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 378.0
YHH3_k127_374514_1 General secretion pathway protein F K02455,K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001949 269.0
YHH3_k127_374514_2 pilus assembly protein K02662 - - 0.00002538 57.0
YHH3_k127_3756406_0 ATPase activity K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006096 271.0
YHH3_k127_3795244_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000001159 265.0
YHH3_k127_3795244_1 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.000000000000000000000000000006224 125.0
YHH3_k127_3798532_0 PFAM Radical SAM domain protein - - - 0.00000000000000000000000005054 119.0
YHH3_k127_3798532_1 Protein of unknown function (DUF4080) K04034 - 1.21.98.3 0.0000000000000000000007011 107.0
YHH3_k127_3827818_0 HAD hydrolase, family IIB - - - 0.00000002014 68.0
YHH3_k127_3866365_0 PP-loop family K14058 - - 0.0000000000000000000000000000000000000000000000000000000003223 211.0
YHH3_k127_3866365_1 diguanylate cyclase - - - 0.00000000000000000000000000000000000002268 163.0
YHH3_k127_3866365_2 Protein of unknown function (DUF1318) K09978 - - 0.0000000006271 65.0
YHH3_k127_3920265_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 372.0
YHH3_k127_3920265_1 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000003939 212.0
YHH3_k127_3920265_2 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000003741 214.0
YHH3_k127_393000_0 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 305.0
YHH3_k127_3939375_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 1.473e-197 621.0
YHH3_k127_3939375_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0000000000000000000000000000000000000000000000000000000000000000007664 232.0
YHH3_k127_3939375_2 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000001041 145.0
YHH3_k127_3939375_3 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000005865 110.0
YHH3_k127_3974758_0 Type II secretion system protein K K02460 - - 0.00000000000002809 85.0
YHH3_k127_4051363_0 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001226 250.0
YHH3_k127_4051363_1 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 0.000000000000000000000000000000000000000000000000000000000000000002849 229.0
YHH3_k127_4051363_2 Transmembrane exosortase (Exosortase_EpsH) - - - 0.000000000000000000000000000000000000000007838 165.0
YHH3_k127_4051363_3 Polysaccharide deacetylase K11931 - - 0.000000000000000000000000000219 125.0
YHH3_k127_4051363_4 CheY-like receiver AAA-type ATPase and DNA-binding domains K07713 - - 0.00000000000000000000001553 104.0
YHH3_k127_4051363_5 Carboxypeptidase K01308 - 3.4.19.11 0.0000000002229 68.0
YHH3_k127_4051363_6 spore cortex-lytic enzyme K01449 GO:0005575,GO:0005623,GO:0042763,GO:0044464 3.5.1.28 0.000000001133 64.0
YHH3_k127_4051363_7 Protein of unknown function (DUF3485) - - - 0.00000004502 62.0
YHH3_k127_4051363_8 Sensory domain found in PocR - - - 0.000001597 60.0
YHH3_k127_4055206_0 PFAM amidohydrolase 2 K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 334.0
YHH3_k127_4055206_1 Involved in molybdopterin and thiamine biosynthesis, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001893 267.0
YHH3_k127_4055206_2 - - - - 0.0000000000000000000000000000000000006271 143.0
YHH3_k127_4084142_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 1.4e-206 653.0
YHH3_k127_4096647_0 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000000000000000000000001666 218.0
YHH3_k127_4096647_1 FecR protein - - - 0.0000007681 58.0
YHH3_k127_4115001_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006227 616.0
YHH3_k127_4115001_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 401.0
YHH3_k127_4115001_2 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 387.0
YHH3_k127_4115001_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000001527 183.0
YHH3_k127_4115001_4 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.0000000000000000000000000000000000275 141.0
YHH3_k127_4115001_5 Protein of unknown function (DUF2905) - - - 0.000000000000002055 78.0
YHH3_k127_4187900_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 319.0
YHH3_k127_4187900_2 Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000008296 208.0
YHH3_k127_4187900_3 Peptidase C26 K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000001913 184.0
YHH3_k127_4261446_0 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002457 282.0
YHH3_k127_4261446_1 PFAM ATPase-like, ATP-binding domain - - - 0.00000001044 68.0
YHH3_k127_4299110_0 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 295.0
YHH3_k127_4299110_1 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000001564 117.0
YHH3_k127_4299110_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000004695 60.0
YHH3_k127_4299110_3 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000001244 54.0
YHH3_k127_4312039_0 DNA helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008087 498.0
YHH3_k127_4312039_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000744 412.0
YHH3_k127_4312039_2 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.0000000000000000001147 90.0
YHH3_k127_4343_0 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.000000000000000007664 100.0
YHH3_k127_4351478_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003306 355.0
YHH3_k127_4351478_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007403 328.0
YHH3_k127_4351478_2 Peptidase family M50 K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001443 276.0
YHH3_k127_4351478_3 Type II IV secretion system protein K02283 - - 0.00000000000000000000001395 105.0
YHH3_k127_4351478_4 Cytidylyltransferase K00981 - 2.7.7.41 0.000006792 48.0
YHH3_k127_4386164_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 415.0
YHH3_k127_4386164_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000834 218.0
YHH3_k127_4389681_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 335.0
YHH3_k127_4389681_1 Single-strand binding protein family K03111 - - 0.0000000000000000000000000000000000001721 146.0
YHH3_k127_4389681_2 Binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000002799 136.0
YHH3_k127_4389681_3 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000001616 85.0
YHH3_k127_4392792_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004565 321.0
YHH3_k127_4392792_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000000001027 94.0
YHH3_k127_4510603_0 Sterol-sensing domain of SREBP cleavage-activation K07003 - - 7.554e-199 640.0
YHH3_k127_4510603_1 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002306 229.0
YHH3_k127_4668708_0 oxidation-reduction process - - - 0.0000000000000000000000000000000441 135.0
YHH3_k127_4668708_1 Glycosyl hydrolase family 3 C-terminal domain K05349 - 3.2.1.21 0.00000000002866 74.0
YHH3_k127_4668708_2 Amidohydrolase K10220 - 4.2.1.83 0.000000578 56.0
YHH3_k127_4732072_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000723 476.0
YHH3_k127_4732072_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 459.0
YHH3_k127_4732072_2 General secretion pathway protein F K02455,K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009592 267.0
YHH3_k127_4732072_3 secretion system protein G K02456 - - 0.00000000000000000000000000000004969 131.0
YHH3_k127_4732072_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000006771 88.0
YHH3_k127_4732072_5 Glycosyl transferase family group 2 K11740 - - 0.000000001763 64.0
YHH3_k127_4732072_6 - - - - 0.0000001167 63.0
YHH3_k127_4878776_0 Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008855 420.0
YHH3_k127_4878776_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 301.0
YHH3_k127_4878776_2 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.0000000000000000000000000000002212 129.0
YHH3_k127_4889936_0 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 573.0
YHH3_k127_4889936_1 malonyl-CoA biosynthetic process K01962,K01963 GO:0001676,GO:0003674,GO:0003824,GO:0003989,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009317,GO:0009329,GO:0009987,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0019752,GO:0032787,GO:0032991,GO:0042759,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576,GO:1902494,GO:1990234 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 389.0
YHH3_k127_4889936_10 Transcriptional regulator PadR-like family - - - 0.00000000000000004044 88.0
YHH3_k127_4889936_11 SMART Tetratricopeptide - - - 0.00000000003746 66.0
YHH3_k127_4889936_2 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007224 342.0
YHH3_k127_4889936_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004922 332.0
YHH3_k127_4889936_4 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 320.0
YHH3_k127_4889936_5 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 298.0
YHH3_k127_4889936_6 TIGRFAM phosphate binding protein K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003491 285.0
YHH3_k127_4889936_7 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000003301 206.0
YHH3_k127_4889936_8 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000002883 173.0
YHH3_k127_4889936_9 Divergent PAP2 family K09775 - - 0.000000000000000000000000000000000002637 143.0
YHH3_k127_49165_0 Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000001083 217.0
YHH3_k127_49165_1 Glycogen recognition site of AMP-activated protein kinase - - - 0.0000000000000002087 84.0
YHH3_k127_49165_2 Protein of unknown function (DUF1009) K09949 - - 0.00000000002269 66.0
YHH3_k127_49165_3 PFAM AsmA family protein K07289 - - 0.0000000001801 74.0
YHH3_k127_4960507_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.00005281 57.0
YHH3_k127_5017217_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 400.0
YHH3_k127_5017217_1 Peptidase S24-like K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000004013 184.0
YHH3_k127_5017217_2 DNA-binding protein with the helix-hairpin-helix motif - - - 0.00000001881 57.0
YHH3_k127_5017217_3 UbiA prenyltransferase family K03179,K04040,K17105 - 2.5.1.133,2.5.1.39,2.5.1.42,2.5.1.62 0.0000000479 66.0
YHH3_k127_5017225_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 8.518e-209 666.0
YHH3_k127_5017225_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000005455 201.0
YHH3_k127_5017225_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000002459 185.0
YHH3_k127_5017225_3 domain protein - - - 0.000000000000000000000000000000000000000001089 166.0
YHH3_k127_5017225_4 Essential for recycling GMP and indirectly, cGMP K00942,K01591 GO:0003674,GO:0003824,GO:0004385,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8,4.1.1.23 0.000000000000000000000000000000001366 138.0
YHH3_k127_5017225_5 - - - - 0.000001727 54.0
YHH3_k127_5017225_6 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0005285 46.0
YHH3_k127_5096719_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 GO:0000018,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009892,GO:0009987,GO:0010605,GO:0016020,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031324,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0045910,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051716,GO:0060255,GO:0060542,GO:0060543,GO:0065007,GO:0071944,GO:0080090 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 536.0
YHH3_k127_5096719_1 protein trimerization - - - 0.00000000000000000000000000000000116 151.0
YHH3_k127_5096719_2 MotA TolQ ExbB proton channel family K03561 - - 0.0000000000127 73.0
YHH3_k127_5099279_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006965 314.0
YHH3_k127_5099279_1 Biotin/lipoate A/B protein ligase family K03800 - 6.3.1.20 0.000000000001007 73.0
YHH3_k127_5162435_0 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000407 327.0
YHH3_k127_5162435_1 Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis K00757 - 2.4.2.3 0.000000000000000000004166 98.0
YHH3_k127_5162435_2 TIGRFAM PAS domain S-box - - - 0.0000000002613 61.0
YHH3_k127_5190033_0 Cation transport protein K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 469.0
YHH3_k127_5190033_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000001024 260.0
YHH3_k127_5190033_2 TrkA-C domain K03499 - - 0.00000000000000000000000000000000000000000953 158.0
YHH3_k127_5190033_3 - - - - 0.000000000000000000000000000000002936 134.0
YHH3_k127_5230510_0 Protein of unknown function DUF58 - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 333.0
YHH3_k127_5230510_1 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 310.0
YHH3_k127_5230510_2 - - - - 0.000000000000000000000000000000000000004209 158.0
YHH3_k127_527451_0 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005818 305.0
YHH3_k127_527451_1 Diguanylate cyclase, GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000001445 211.0
YHH3_k127_5288733_0 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 330.0
YHH3_k127_5288733_1 Tetratricopeptide repeat - - - 0.000000000000000000000000002862 117.0
YHH3_k127_5288733_2 PFAM peptidase M48 Ste24p K06013 - 3.4.24.84 0.0000000006467 66.0
YHH3_k127_5296280_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009766 439.0
YHH3_k127_5296280_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002561 282.0
YHH3_k127_5296280_2 Outer membrane protein (OmpH-like) K06142 - - 0.000000007269 64.0
YHH3_k127_5300682_0 PKD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 489.0
YHH3_k127_5300682_1 PFAM Binding-protein-dependent transport system inner membrane component K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007562 391.0
YHH3_k127_5300682_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005296 368.0
YHH3_k127_5300682_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 361.0
YHH3_k127_5300682_4 Redoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000008143 248.0
YHH3_k127_5300682_5 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000001145 223.0
YHH3_k127_5300682_6 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.00000000000000000000000000000000000000000000000003022 181.0
YHH3_k127_5300682_7 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000009828 115.0
YHH3_k127_5301826_0 HD domain - - - 0.00000000000000000000000000000000000000000000000000000002712 214.0
YHH3_k127_5373685_0 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 415.0
YHH3_k127_5373685_1 synthase K01654 - 2.5.1.56 0.00000000000000000000000000000000000000000000000000000000000002274 221.0
YHH3_k127_5373685_2 Radical SAM domain protein - - - 0.0000000000000000007023 90.0
YHH3_k127_547274_0 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004442 485.0
YHH3_k127_547274_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000002897 272.0
YHH3_k127_547274_2 pyridine nucleotide-disulphide oxidoreductase dimerisation K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000008269 234.0
YHH3_k127_5473827_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 332.0
YHH3_k127_5473827_1 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000000000000002293 208.0
YHH3_k127_5473827_2 PFAM Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000006604 136.0
YHH3_k127_5476810_0 TIGRFAM Hopanoid biosynthesis associated radical SAM protein HpnH - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002483 308.0
YHH3_k127_5476810_1 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000002448 237.0
YHH3_k127_5476810_2 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000000000000000002361 216.0
YHH3_k127_5476810_3 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000001451 57.0
YHH3_k127_5501135_0 tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000001604 227.0
YHH3_k127_5501135_1 NUDIX domain K03575 - - 0.000000000000000000000000000000000000000000000000007899 186.0
YHH3_k127_5522391_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003377 588.0
YHH3_k127_5522391_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007574 368.0
YHH3_k127_5522391_2 PFAM Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000001039 200.0
YHH3_k127_5522391_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000004625 153.0
YHH3_k127_5607139_0 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002255 275.0
YHH3_k127_5607139_1 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000371 125.0
YHH3_k127_5607139_2 Oxygen tolerance - - - 0.000000000000002392 85.0
YHH3_k127_5607139_3 von Willebrand factor, type A K07114 - - 0.0005588 51.0
YHH3_k127_5677368_0 Belongs to the glycosyl hydrolase 57 family K16149 - 2.4.1.18 8.037e-234 733.0
YHH3_k127_5677368_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009105 271.0
YHH3_k127_5677368_2 Domain of unknown function (DUF4912) K09942 - - 0.0000000000000000000000000000000000000000000000009183 188.0
YHH3_k127_5677368_3 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.00000000000000000000000000000000000002592 146.0
YHH3_k127_5677368_4 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.0000000000000000000000000000000003774 139.0
YHH3_k127_5677368_5 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000005865 125.0
YHH3_k127_5691197_0 Protein of unknown function (DUF3300) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002355 244.0
YHH3_k127_5691197_1 Predicted periplasmic protein (DUF2092) - - - 0.0000000000000000000000000000000000000000000000000000000001074 213.0
YHH3_k127_5705229_0 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000009561 171.0
YHH3_k127_5751738_0 Resolvase, RNase H domain protein fold K06959 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007494 499.0
YHH3_k127_5751738_1 PFAM peptidase M29, aminopeptidase II K19689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007181 450.0
YHH3_k127_5886115_0 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 520.0
YHH3_k127_5886115_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007374 447.0
YHH3_k127_5886115_2 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003167 282.0
YHH3_k127_5886115_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000007658 227.0
YHH3_k127_5886115_4 PFAM Oligosaccharyl transferase STT3 subunit K07151,K21306 - 2.4.99.18,2.4.99.21 0.0000000000000000000000000000000000000000000000000003549 211.0
YHH3_k127_5886115_5 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000009265 181.0
YHH3_k127_5886115_6 glycoside hydrolase, family 65 domain protein - - - 0.0000000000000000000000000000000000002804 144.0
YHH3_k127_5886115_7 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000003207 141.0
YHH3_k127_5886115_8 Belongs to the UPF0102 family K07460 - - 0.00000000000000000007335 93.0
YHH3_k127_5979652_0 Ammonium Transporter Family K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001263 265.0
YHH3_k127_5979652_1 6-phospho-beta-galactosidase activity - - - 0.000000000000000000000000000000000000004004 162.0
YHH3_k127_6010315_0 Histidine kinase - - - 0.00000000000000000000000000273 124.0
YHH3_k127_6010315_1 FecR protein - - - 0.0002709 52.0
YHH3_k127_6035493_0 Competence protein ComEC K02238 - - 0.00000000000000000000000000000000001552 154.0
YHH3_k127_6035493_1 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000191 135.0
YHH3_k127_6042547_0 AAA domain K02450 - - 0.0000000000000000000000000000000000000000002547 166.0
YHH3_k127_6042547_1 COG0489 ATPases involved in chromosome partitioning K00903 - 2.7.10.2 0.0000000000000000000000000000000000000000002794 168.0
YHH3_k127_6101582_0 PFAM Uncharacterised ACR, COG1259 K08999 - - 0.0000000009743 61.0
YHH3_k127_6111390_0 Cytochrome C biogenesis protein - - - 0.000000000000000000000000000000000000006577 160.0
YHH3_k127_6111390_1 COG1253 Hemolysins and related proteins containing CBS domains - - - 0.00000000000000000000000001442 121.0
YHH3_k127_6114323_0 AIR carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000009222 221.0
YHH3_k127_6114323_1 MgtC family K07507 - - 0.000000000000000000000000000000000007698 141.0
YHH3_k127_6114323_2 Belongs to the LarC family K09121 - 4.99.1.12 0.00000000000000000000000000000007287 135.0
YHH3_k127_6114323_3 Polymer-forming cytoskeletal - - - 0.00000000000000001204 89.0
YHH3_k127_6114323_4 DNA binding domain - - - 0.00005102 52.0
YHH3_k127_6114323_5 DNA binding domain, excisionase family K07219 - - 0.0001938 48.0
YHH3_k127_611908_0 L-glutamate biosynthetic process K00265,K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016020,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 0.0 1884.0
YHH3_k127_611908_1 glutamine synthetase K01915 - 6.3.1.2 3.736e-208 662.0
YHH3_k127_611908_2 Glutamate synthase, NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007528 563.0
YHH3_k127_611908_3 glucose-1-phosphate adenylyltransferase K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007508 409.0
YHH3_k127_611908_4 metalloendopeptidase activity K03799 - - 0.0000000000000000000000000000000000000000000000000000000000002471 231.0
YHH3_k127_611908_5 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000004094 205.0
YHH3_k127_6207959_0 Glycosyltransferase family 20 K00697,K13057,K20436 - 2.4.1.15,2.4.1.245,2.4.1.347,2.5.1.135 1.48e-206 661.0
YHH3_k127_6207959_1 transferase activity, transferring glycosyl groups K13057 - 2.4.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 315.0
YHH3_k127_6207959_2 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000048 261.0
YHH3_k127_6207959_3 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000000000000000000000000001017 181.0
YHH3_k127_625004_0 DNA topoisomerase II activity K02469 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007014 524.0
YHH3_k127_6291844_0 DNA photolyase K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000008171 211.0
YHH3_k127_6291844_1 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000004496 167.0
YHH3_k127_6291844_2 TIGRFAM DJ-1 family protein K03152 - 3.5.1.124 0.000000000000000000000000000000000000000009163 161.0
YHH3_k127_6291844_3 Nuclease (SNase domain protein) K01174 - 3.1.31.1 0.000000000000000001499 92.0
YHH3_k127_6291844_4 auxin-activated signaling pathway K07088 - - 0.000002712 59.0
YHH3_k127_6291844_5 PFAM amino acid-binding ACT domain protein - - - 0.0004643 48.0
YHH3_k127_6342444_0 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 3.138e-211 662.0
YHH3_k127_6342444_1 Belongs to the Orn Lys Arg decarboxylase class-II family. NspC subfamily K13747 - 4.1.1.96 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 329.0
YHH3_k127_6342444_2 binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004222 276.0
YHH3_k127_6432566_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006991 547.0
YHH3_k127_6432566_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01666 - 4.1.3.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 394.0
YHH3_k127_6432566_2 KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.000000000000000000000000000000000000000000000000000009305 197.0
YHH3_k127_6432566_3 Protein containing tetrapyrrole methyltransferase domain and MazG-like K02428,K02499 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.66 0.000000000000000000000000000000000006218 141.0
YHH3_k127_6432566_4 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000001202 121.0
YHH3_k127_6454681_0 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000003457 221.0
YHH3_k127_6454681_1 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000004763 179.0
YHH3_k127_6460624_0 beta-galactosidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001223 266.0
YHH3_k127_6460624_1 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term - - - 0.000003911 50.0
YHH3_k127_6461744_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 6.056e-204 655.0
YHH3_k127_6461744_1 recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071 309.0
YHH3_k127_6461744_2 CBS domain containing protein K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000498 282.0
YHH3_k127_6461744_3 DHH family K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000001503 247.0
YHH3_k127_6461744_4 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000001808 221.0
YHH3_k127_6461744_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000002129 213.0
YHH3_k127_6461744_6 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000001893 214.0
YHH3_k127_6461744_7 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000003174 171.0
YHH3_k127_6461744_8 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000008872 107.0
YHH3_k127_649876_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000005814 193.0
YHH3_k127_649876_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.00000000414 64.0
YHH3_k127_6509022_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K08483 - 2.7.3.9,2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007404 609.0
YHH3_k127_6509022_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005412 545.0
YHH3_k127_6509022_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004711 535.0
YHH3_k127_6509022_3 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000005546 184.0
YHH3_k127_6509022_4 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000429 143.0
YHH3_k127_6509022_5 phosphocarrier protein HPr K11189 - - 0.0000000000000000003194 89.0
YHH3_k127_6529315_0 Uncharacterized protein conserved in bacteria (DUF2059) - - - 0.000000008458 67.0
YHH3_k127_6562134_0 General secretory system II, protein E domain protein K02652 - - 0.00000000000000000000000000000000000001814 149.0
YHH3_k127_6562134_1 General secretory system II protein E domain protein K02652 - - 0.0000000000000000000000000002584 119.0
YHH3_k127_6562134_2 Diguanylate cyclase - - - 0.00002133 50.0
YHH3_k127_6576126_0 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000003426 237.0
YHH3_k127_6576126_1 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000009401 222.0
YHH3_k127_6601810_0 Capsular exopolysaccharide family K16554 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 366.0
YHH3_k127_6601810_1 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 334.0
YHH3_k127_6601810_2 polysaccharide export K01991 - - 0.000000000000000000000000000000000000000000000000000002137 211.0
YHH3_k127_6601810_3 Polysaccharide biosynthesis protein - - - 0.000000000157 67.0
YHH3_k127_6604388_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 372.0
YHH3_k127_6604388_1 Catalyzes the specific phosphorylation of arginine residues in proteins K19405 - 2.7.14.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 350.0
YHH3_k127_6604388_2 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 324.0
YHH3_k127_6604388_3 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K02003,K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000003453 239.0
YHH3_k127_6604388_4 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000001086 223.0
YHH3_k127_6604388_5 with chaperone activity ATP-binding K03696 - - 0.00000000000000000000000000000000000000000000000001917 181.0
YHH3_k127_6604388_6 UvrB/uvrC motif K19411 GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170 - 0.000000000000000000000000000000000008802 143.0
YHH3_k127_6612353_0 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000003303 241.0
YHH3_k127_6612353_1 PFAM metallophosphoesterase K07098 - - 0.000000000000000000000000000000002727 142.0
YHH3_k127_6693292_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 340.0
YHH3_k127_6693292_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000004618 212.0
YHH3_k127_6721972_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 313.0
YHH3_k127_6721972_1 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 308.0
YHH3_k127_6721972_2 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000006612 192.0
YHH3_k127_6721972_3 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000002261 185.0
YHH3_k127_6731509_0 peptidyl-lysine modification to peptidyl-hypusine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004115 285.0
YHH3_k127_6784974_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 1.948e-212 671.0
YHH3_k127_6784974_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 1.163e-208 657.0
YHH3_k127_6784974_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000000000000003839 168.0
YHH3_k127_6784974_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000051 49.0
YHH3_k127_6826333_0 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000009881 249.0
YHH3_k127_6826333_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000009754 221.0
YHH3_k127_6826333_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000002401 145.0
YHH3_k127_6826333_3 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000001279 132.0
YHH3_k127_6826333_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000004672 91.0
YHH3_k127_6826333_5 PFAM peptidase M52 hydrogen uptake protein K03605 - - 0.000000000005413 72.0
YHH3_k127_6826333_6 Transcriptional regulator K13640 - - 0.000000003279 61.0
YHH3_k127_6826333_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0001671 49.0
YHH3_k127_6973148_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006174 341.0
YHH3_k127_6973148_1 ABC-2 type transporter K09694 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000424 284.0
YHH3_k127_6973148_2 Psort location Cytoplasmic, score K01163 - - 0.00000000000000000000000000000000000000000000000000000001034 211.0
YHH3_k127_6973148_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000006307 149.0
YHH3_k127_6973148_4 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000002069 117.0
YHH3_k127_6973148_5 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.000000000000000000000000054 108.0
YHH3_k127_6973148_6 Belongs to the UPF0235 family K09131 - - 0.00000003327 58.0
YHH3_k127_6973148_7 TM2 domain - - - 0.0000003193 56.0
YHH3_k127_7008213_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009683 431.0
YHH3_k127_7008213_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000003971 242.0
YHH3_k127_7008213_2 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000048 227.0
YHH3_k127_7008213_3 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000002585 144.0
YHH3_k127_7008213_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000001475 65.0
YHH3_k127_7008213_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000001278 59.0
YHH3_k127_7008213_6 proton-transporting ATP synthase activity, rotational mechanism K02114 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0001531 49.0
YHH3_k127_7039284_0 TonB-dependent Receptor Plug K02014,K16089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 308.0
YHH3_k127_7039284_1 Protein of unknown function DUF45 K07043 - - 0.0006436 46.0
YHH3_k127_705725_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 410.0
YHH3_k127_705725_1 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00170 - 1.2.7.1 0.000000000000000000000000000000000000000000002966 166.0
YHH3_k127_705754_0 Response regulator receiver K02488 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0042802,GO:0044424,GO:0044464 2.7.7.65 0.0000000000000000000000000003726 135.0
YHH3_k127_7119261_0 COG0668 Small-conductance mechanosensitive channel K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008167 315.0
YHH3_k127_7119261_1 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000008849 237.0
YHH3_k127_7119261_2 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000002749 99.0
YHH3_k127_7140935_0 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02004,K05685 - - 2.806e-221 704.0
YHH3_k127_7140935_1 Cobalt uptake substrate-specific transmembrane region K02007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 341.0
YHH3_k127_7140935_2 TIGRFAM efflux transporter, RND family, MFP subunit K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 307.0
YHH3_k127_7140935_3 PFAM outer membrane efflux protein - - - 0.00000000000000000006187 91.0
YHH3_k127_7140935_4 PFAM Cobalt uptake substrate-specific transmembrane region K02007 - - 0.0000000000000000004591 89.0
YHH3_k127_7140935_5 ZIP Zinc transporter K07238 - - 0.000000000000009124 75.0
YHH3_k127_7140935_6 YceI-like domain - - - 0.000000001289 66.0
YHH3_k127_7143346_0 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 593.0
YHH3_k127_7143346_1 6-phosphofructokinase activity K00850,K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000483 478.0
YHH3_k127_7143346_10 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000002307 134.0
YHH3_k127_7143346_11 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.0000000000000000000107 97.0
YHH3_k127_7143346_12 membrane - - - 0.00000000000001159 78.0
YHH3_k127_7143346_13 PFAM Archaeal ATPase - - - 0.000000000000105 84.0
YHH3_k127_7143346_14 Alkaline-shock protein - - - 0.0000000000009558 73.0
YHH3_k127_7143346_15 Protein conserved in bacteria - - - 0.00000006457 62.0
YHH3_k127_7143346_16 Lysin motif K06194 - - 0.0000002761 60.0
YHH3_k127_7143346_17 - - - - 0.0000551 49.0
YHH3_k127_7143346_2 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 454.0
YHH3_k127_7143346_3 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006052 444.0
YHH3_k127_7143346_4 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 306.0
YHH3_k127_7143346_5 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000001324 192.0
YHH3_k127_7143346_6 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000000000007591 186.0
YHH3_k127_7143346_7 Hit family K19710 - 2.7.7.53 0.000000000000000000000000000000000000000000000000007771 185.0
YHH3_k127_7143346_8 metal-dependent phosphohydrolase HD region - - - 0.00000000000000000000000000000000000000000000000002327 192.0
YHH3_k127_7143346_9 PFAM peptidase M50 - - - 0.0000000000000000000000000000000000000000000000001134 184.0
YHH3_k127_7188866_0 ATPases associated with a variety of cellular activities K09817 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000759 300.0
YHH3_k127_7188866_1 PFAM periplasmic solute binding protein K09815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001182 280.0
YHH3_k127_7188866_2 Bacitracin resistance protein BacA K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001715 278.0
YHH3_k127_7188866_3 Ferric uptake regulator, Fur family K03711 - - 0.00000000000000000000000000000000002324 139.0
YHH3_k127_7188866_4 pfam abc-3 K09816,K09819 - - 0.00000001131 56.0
YHH3_k127_7191485_0 Isochorismatase family K08281 - 3.5.1.19 0.00000000000000000000000000000000000000000000000000000000000001739 220.0
YHH3_k127_7191485_1 Haloacid dehalogenase-like hydrolase K01838 - 5.4.2.6 0.0000000000000000000000000000000000000009207 156.0
YHH3_k127_7191485_2 PFAM Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000007318 132.0
YHH3_k127_7191485_3 Activates the tRNA-splicing ligase complex by facilitating the enzymatic turnover of catalytic subunit RtcB. Acts by promoting the guanylylation of RtcB, a key intermediate step in tRNA ligation. Can also alter the NTP specificity of RtcB such that ATP, dGTP or ITP is used efficiently - - - 0.000000000000002996 82.0
YHH3_k127_7193778_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006023 341.0
YHH3_k127_7201578_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.0 1124.0
YHH3_k127_7201578_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043,K13797 GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 2.776e-210 665.0
YHH3_k127_7231702_0 PFAM Type II secretion system protein E K02454,K02652 - - 0.00000000000001141 81.0
YHH3_k127_7231702_1 Nitroreductase family - - - 0.00000000001127 75.0
YHH3_k127_7231702_2 pilus assembly protein PilW K02672 - - 0.0002712 49.0
YHH3_k127_7231702_3 Pilus assembly protein PilX - - - 0.0003436 51.0
YHH3_k127_7242031_0 Required for morphogenesis under gluconeogenic growth conditions - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 418.0
YHH3_k127_7242031_1 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02768,K02806 - 2.7.1.202 0.000000000000000000000000000000000005281 141.0
YHH3_k127_7253226_0 transferase activity, transferring glycosyl groups K00694,K20541 GO:0000271,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0016020,GO:0016051,GO:0030243,GO:0030244,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0051273,GO:0051274,GO:0071704,GO:0071944,GO:0090540,GO:1901576 2.4.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009911 479.0
YHH3_k127_7253226_1 Belongs to the glycosyl hydrolase 8 (cellulase D) family K00694,K15531,K20542 - 2.4.1.12,3.2.1.156,3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009878 295.0
YHH3_k127_7253226_2 - - - - 0.00001303 50.0
YHH3_k127_7307418_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 531.0
YHH3_k127_7307418_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 336.0
YHH3_k127_7307418_2 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03072,K12257 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000001915 226.0
YHH3_k127_7307418_3 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000007906 187.0
YHH3_k127_7307418_4 Histidine biosynthesis bifunctional protein HisIE K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000004632 147.0
YHH3_k127_7307418_5 Preprotein translocase, YajC subunit K03210 - - 0.00000000000000000000001217 103.0
YHH3_k127_7307418_6 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000000000003285 78.0
YHH3_k127_742521_0 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005223 267.0
YHH3_k127_742521_1 Polymer-forming cytoskeletal - - - 0.000000002996 62.0
YHH3_k127_742521_2 transposase activity K07483 - - 0.000000007785 61.0
YHH3_k127_742521_3 type IV pilus modification protein PilV K02671 - - 0.0004832 49.0
YHH3_k127_7437334_0 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003864 334.0
YHH3_k127_7453201_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 528.0
YHH3_k127_7453201_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008247 265.0
YHH3_k127_7453201_2 ANTAR - - - 0.00000000000000000000000000000000000000000000000000000000313 207.0
YHH3_k127_7453201_3 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000245 112.0
YHH3_k127_7453201_4 Phospholipid methyltransferase - - - 0.00000000000000000002639 99.0
YHH3_k127_7453201_5 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.0000000000000003463 79.0
YHH3_k127_7453201_6 Prokaryotic N-terminal methylation motif - - - 0.00001093 54.0
YHH3_k127_752130_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009719 606.0
YHH3_k127_752130_1 Psort location Cytoplasmic, score 9.97 K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000007038 225.0
YHH3_k127_752130_2 beta-galactosidase activity - - - 0.00000000000000000000000000000001026 138.0
YHH3_k127_752130_3 Ppx GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000109 135.0
YHH3_k127_752130_4 PFAM CHAD domain containing protein - - - 0.00000000000000000000431 104.0
YHH3_k127_752130_5 Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000393 58.0
YHH3_k127_7539327_0 poly(R)-hydroxyalkanoic acid synthase subunit PhaC K03821 - - 0.0000000000000000001949 104.0
YHH3_k127_7658146_0 Fructose-1,6-bisphosphate aldolase, class II K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 514.0
YHH3_k127_7658146_1 homoserine dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008217 359.0
YHH3_k127_7658146_2 methyltransferase K00745,K12988,K18704 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464 2.4.1.166,2.7.8.14,2.7.8.47 0.00000000000000000000000003117 119.0
YHH3_k127_7801444_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 2.006e-252 793.0
YHH3_k127_7801444_1 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00850,K00895 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005099 477.0
YHH3_k127_7801444_2 Polyphosphate kinase 2 (PPK2) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007077 432.0
YHH3_k127_7801444_3 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005499 339.0
YHH3_k127_7801444_4 ATP synthase subunit C K02124 - - 0.0000000000000000000000000000000000000000000000000003201 188.0
YHH3_k127_7801444_5 - - - - 0.0000000000000000000000000000000000000000000001547 176.0
YHH3_k127_7801444_6 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.0000000000000000001637 96.0
YHH3_k127_785082_0 PFAM RmuC family K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 445.0
YHH3_k127_785082_1 Protein of unknown function (DUF1722) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 378.0
YHH3_k127_785082_2 PFAM tRNA pseudouridine synthase D TruD K06176 - 5.4.99.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005129 334.0
YHH3_k127_785082_3 Metal-dependent hydrolase K07043 - - 0.000000000000000000000000000009237 124.0
YHH3_k127_785082_4 Protein of unknown function (DUF503) K09764 - - 0.0000000000000003663 81.0
YHH3_k127_7861433_0 Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000000000000000005511 209.0
YHH3_k127_7861433_1 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000008197 74.0
YHH3_k127_7861433_2 Cytochrome C biogenesis protein transmembrane region - - - 0.000000152 61.0
YHH3_k127_7922266_0 PFAM Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000004147 183.0
YHH3_k127_7922266_1 PFAM ATP-binding region, ATPase domain protein domain protein - - - 0.000000000000000000000000000001127 137.0
YHH3_k127_7922266_2 - - - - 0.000000000000000000000000000004797 126.0
YHH3_k127_7922266_4 TPR repeat - - - 0.000001342 55.0
YHH3_k127_7964002_0 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005818 332.0
YHH3_k127_7964002_1 PFAM MMPL family K07003 - - 0.00000000000000000000000000000000000000000005414 166.0
YHH3_k127_7964002_2 4Fe-4S single cluster domain - - - 0.00000000000000000000000000009128 119.0
YHH3_k127_7964002_3 regulatory protein, arsR - - - 0.000000000000000000000496 98.0
YHH3_k127_7971256_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 8.403e-315 992.0
YHH3_k127_7971256_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006804 534.0
YHH3_k127_7971256_10 EamA-like transporter family K05786 - - 0.00000004244 61.0
YHH3_k127_7971256_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 486.0
YHH3_k127_7971256_3 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 479.0
YHH3_k127_7971256_4 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003962 339.0
YHH3_k127_7971256_5 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002213 281.0
YHH3_k127_7971256_6 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000007215 229.0
YHH3_k127_7971256_7 D-isomer specific 2-hydroxyacid dehydrogenase K03778 - 1.1.1.28 0.00000000000000000000000000000000000000003457 153.0
YHH3_k127_7971256_8 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000001255 141.0
YHH3_k127_7971256_9 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.000000000000000000000000000000003248 136.0
YHH3_k127_7991306_0 SMART Elongator protein 3 MiaB NifB K18707 - 2.8.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 300.0
YHH3_k127_7991306_1 TrkA-C domain - - - 0.000000000000000000000000000000000000000000000000000000000000365 219.0
YHH3_k127_7991306_2 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000002618 64.0
YHH3_k127_8018359_0 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 378.0
YHH3_k127_8018359_1 HD domain - - - 0.0000000000000000000000000000000000000001659 166.0
YHH3_k127_8032799_0 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000001414 169.0
YHH3_k127_8032799_1 HI0933-like protein K07007 - - 0.000000000000000000000000000001287 127.0
YHH3_k127_8032799_2 Lipid A biosynthesis K02517 - 2.3.1.241 0.000000000001138 70.0
YHH3_k127_8043859_0 Nickel-dependent hydrogenase K00436,K14126 - 1.12.1.2,1.8.98.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 298.0
YHH3_k127_8043859_1 coenzyme F420 hydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 290.0
YHH3_k127_8043859_2 Oxidoreductase FAD-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001732 282.0
YHH3_k127_8045874_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 2.311e-305 951.0
YHH3_k127_8080665_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 GO:0003674,GO:0003824,GO:0004749,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016772,GO:0016778,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 384.0
YHH3_k127_8080665_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 298.0
YHH3_k127_8080665_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000001894 178.0
YHH3_k127_8138878_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 2.479e-209 679.0
YHH3_k127_8138878_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 322.0
YHH3_k127_8138878_2 Flavodoxin - - - 0.00000000000000000000000000000000000000007271 156.0
YHH3_k127_8325825_0 Dehydroquinase class II K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000962 162.0
YHH3_k127_8325825_1 DNA polymerase alpha chain like domain - - - 0.0000000000000000000000000000000000000829 146.0
YHH3_k127_8325825_2 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000184 150.0
YHH3_k127_8325825_3 Domain of unknown function (DUF1844) - - - 0.00000000001357 69.0
YHH3_k127_8325825_4 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.000000000414 61.0
YHH3_k127_8345350_0 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000003103 243.0
YHH3_k127_8345350_1 Conserved protein domain typically associated with flavoprotein oxygenases DIM6 NTAB family - - - 0.000000000000000000000000000000000000000000000000000000000699 206.0
YHH3_k127_8345350_2 Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b) K07337 - - 0.000000000000000000000000000000000000000002511 162.0
YHH3_k127_8345350_3 - - - - 0.0000000000000000000000000000000001121 138.0
YHH3_k127_8345350_4 protein conserved in bacteria - - - 0.00000000000000000001573 106.0
YHH3_k127_8345350_5 - - - - 0.0000000000001615 77.0
YHH3_k127_8345350_7 zinc-ribbon domain - - - 0.00001926 51.0
YHH3_k127_8366499_0 PFAM Bacterial type II secretion system protein F domain K02653 - - 0.00000000000000000000000000000002262 132.0
YHH3_k127_8366499_1 Pfam:N_methyl_2 - - - 0.0000001945 58.0
YHH3_k127_8366499_2 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.00002193 57.0
YHH3_k127_8516360_0 neurotransmitter:sodium symporter activity K03308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 563.0
YHH3_k127_8516360_1 Glycosyltransferase family 9 (heptosyltransferase) K02841,K02843 - - 0.000000000000000004391 90.0
YHH3_k127_8516360_2 nuclease K01174 - 3.1.31.1 0.0000001357 57.0
YHH3_k127_854583_0 ATP synthase alpha/beta family, beta-barrel domain K02118 - - 3.747e-230 719.0
YHH3_k127_854583_1 ATP synthase subunit D K02120 - - 0.000000000000000000000000000000000000000000001762 171.0
YHH3_k127_854583_2 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.000000000009105 68.0
YHH3_k127_8548111_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 533.0
YHH3_k127_8548111_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000159 133.0
YHH3_k127_8566220_0 Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily K03615 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008346 427.0
YHH3_k127_8566220_1 Part of a membrane complex involved in electron transport K03614 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 340.0
YHH3_k127_8566220_2 Part of a membrane complex involved in electron transport K03613 - - 0.000000000000000000000000000000000000000000000000000000000000002913 224.0
YHH3_k127_8566220_3 Part of a membrane complex involved in electron transport K03617 - - 0.000000000000000000000000000000000000000000000000000000001493 207.0
YHH3_k127_8566220_4 FMN binding K03612,K03613,K21559 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009279,GO:0016020,GO:0016491,GO:0016651,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0055114,GO:0071944 - 0.00000000000000000129 93.0
YHH3_k127_8566220_5 electron transport complex, RnfABCDGE type, B subunit K03616 - - 0.0004604 43.0
YHH3_k127_8572598_0 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003793 534.0
YHH3_k127_8572598_1 biosynthesis protein ThiH K03150 - 4.1.99.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004463 388.0
YHH3_k127_8572598_2 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 345.0
YHH3_k127_8572598_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000001422 259.0
YHH3_k127_8572598_4 Thiamine biosynthesis protein ThiF K03148 - 2.7.7.73 0.00000000000000000000000000000000000000000000000000000000000000001228 229.0
YHH3_k127_8572598_5 PFAM Oligosaccharyl transferase STT3 subunit K07151,K21306 - 2.4.99.18,2.4.99.21 0.0000000000000000000000000000000000000000005569 180.0
YHH3_k127_8572598_6 thiamine diphosphate biosynthetic process K03154 - - 0.00000000000004698 74.0
YHH3_k127_8608467_0 leucyl-tRNA aminoacylation K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1011.0
YHH3_k127_8608467_1 Transporter, MotA TolQ ExbB proton channel family protein K03561 - - 0.00000000000115 73.0
YHH3_k127_8608467_2 Helix-hairpin-helix motif K02237 - - 0.000000000009326 71.0
YHH3_k127_862175_0 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000002248 230.0
YHH3_k127_862175_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000001815 68.0
YHH3_k127_8671457_0 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000001712 248.0
YHH3_k127_8671457_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000226 244.0
YHH3_k127_8671457_2 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.000000000000000000000008626 102.0
YHH3_k127_869299_0 PFAM Radical SAM K06871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 610.0
YHH3_k127_869299_1 COG3119 Arylsulfatase A and related enzymes K01130 - 3.1.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 336.0
YHH3_k127_869299_2 - - - - 0.00000000000000000000000001886 114.0
YHH3_k127_869299_3 PFAM Uracil-DNA glycosylase superfamily K03648 - 3.2.2.27 0.00000000000000001964 82.0
YHH3_k127_8707368_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006003 546.0
YHH3_k127_8707368_1 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000006221 188.0
YHH3_k127_8707368_2 molybdenum cofactor - - - 0.0000000000000000000000000000000000003113 146.0
YHH3_k127_8707368_3 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000000000000000001024 96.0
YHH3_k127_8712049_0 TIGRFAM single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 456.0
YHH3_k127_8712049_1 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000001395 68.0
YHH3_k127_8712049_2 Peptide chain release factor - - - 0.0000001925 57.0
YHH3_k127_8792869_0 DHH family - - - 0.0000000000000000000000000006163 124.0
YHH3_k127_8792869_1 FusA NodT family protein - - - 0.000000000000000000000003046 114.0
YHH3_k127_8847103_0 - - - - 0.0000000000000000000000131 117.0
YHH3_k127_8847103_1 small GTP-binding protein - - - 0.00000000000000000000175 94.0
YHH3_k127_8860439_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 420.0
YHH3_k127_8860439_1 Type II/IV secretion system protein K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000962 342.0
YHH3_k127_8860439_2 NusA-like KH domain K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000535 336.0
YHH3_k127_8860439_3 COG4962 Flp pilus assembly protein, ATPase CpaF K02283 - - 0.00000000000000000000000000000000000000000000000000000000001395 211.0
YHH3_k127_8860439_4 Required for maturation of 30S ribosomal subunits K09748 - - 0.000000000000000000002162 100.0
YHH3_k127_8860439_5 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00003168 53.0
YHH3_k127_8890998_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 400.0
YHH3_k127_8890998_1 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001439 281.0
YHH3_k127_8890998_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000142 196.0
YHH3_k127_8929142_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 594.0
YHH3_k127_8929142_1 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000002094 237.0
YHH3_k127_8929142_2 PFAM Excinuclease ABC, C subunit domain protein K07461 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.0000000000000000000004725 98.0
YHH3_k127_8929142_3 Rubrerythrin - - - 0.0000008791 57.0
YHH3_k127_8953414_0 Ferrous iron transport protein B K04759 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009353 605.0
YHH3_k127_8953414_1 Thiamine biosynthesis protein (ThiI) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001115 287.0
YHH3_k127_8953414_2 Arsenical pump membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001453 247.0
YHH3_k127_8953414_4 Psort location Cytoplasmic, score 8.87 - - - 0.0000001449 55.0
YHH3_k127_8953414_5 PFAM FeoA K04758 - - 0.000000259 55.0
YHH3_k127_8964191_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 325.0
YHH3_k127_8964191_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000002259 196.0
YHH3_k127_8964191_2 Binds directly to 16S ribosomal RNA K02968 - - 0.0000001514 56.0
YHH3_k127_8964191_3 cell envelope organization K05807,K08309 - - 0.00000134 57.0
YHH3_k127_8964191_4 Lipopolysaccharide-assembly - - - 0.00005935 52.0
YHH3_k127_8985368_0 Serine aminopeptidase, S33 - - - 0.000000000000000000000005489 111.0
YHH3_k127_8985368_1 maltose O-acetyltransferase activity - - - 0.0000000000000001062 89.0
YHH3_k127_8985368_2 CDP-alcohol phosphatidyltransferase K17884 - 2.7.8.39 0.000000000000002182 85.0
YHH3_k127_9046868_0 Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.0000000000000000000000000000000000000000000000001793 188.0
YHH3_k127_9046868_1 ROK family - - - 0.0000000000000000000002447 105.0
YHH3_k127_9058317_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 8.661e-238 745.0
YHH3_k127_9058317_1 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000304 501.0
YHH3_k127_9058317_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000003966 173.0
YHH3_k127_9058317_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000001313 132.0
YHH3_k127_9082233_0 Pterin binding enzyme K00548,K15023 - 2.1.1.13,2.1.1.258 0.0000000000000000000000000000000000000000000000000000000000000000000007882 245.0
YHH3_k127_9082233_1 CO dehydrogenase/acetyl-CoA synthase delta subunit - - - 0.0000000000000000005882 88.0
YHH3_k127_9091811_0 PFAM aminotransferase class V - GO:0001505,GO:0003674,GO:0003824,GO:0004760,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006082,GO:0006520,GO:0006544,GO:0006545,GO:0006807,GO:0008150,GO:0008152,GO:0008453,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0019265,GO:0019752,GO:0042133,GO:0042136,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008553 410.0
YHH3_k127_9091811_1 ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004556 310.0
YHH3_k127_9091811_2 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005684 289.0
YHH3_k127_9091811_3 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003449 283.0
YHH3_k127_9091811_4 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000009627 103.0
YHH3_k127_9091811_5 lipopolysaccharide transmembrane transporter activity K09774,K11719 - - 0.000002753 59.0
YHH3_k127_9091811_6 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.00002691 55.0
YHH3_k127_9116599_0 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002538 244.0
YHH3_k127_9116599_1 lipoprotein localization to outer membrane K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000002297 247.0
YHH3_k127_9116599_2 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000001001 209.0
YHH3_k127_9116599_3 - - - - 0.000000000000000000000000000000000000000000000000001959 192.0
YHH3_k127_9120729_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 380.0
YHH3_k127_9120729_1 galactose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 0.00000000000000000004462 90.0
YHH3_k127_9137310_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 8.971e-202 646.0
YHH3_k127_9137310_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000008007 192.0
YHH3_k127_9137310_2 Carbamoyltransferase C-terminus K00612 - - 0.0000000000000000000000000002147 116.0
YHH3_k127_9137310_3 dihydropteroate synthase K00796 - 2.5.1.15 0.00000000000000000000000001174 115.0
YHH3_k127_918978_0 Exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 397.0
YHH3_k127_918978_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000001337 228.0
YHH3_k127_918978_2 endonuclease III K03653 - 4.2.99.18 0.0000000000000000000000000000000000000000000000007175 182.0
YHH3_k127_918978_3 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000001332 93.0
YHH3_k127_918978_4 biogenesis protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000008496 88.0
YHH3_k127_918978_5 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.00000000000549 73.0
YHH3_k127_9224275_0 PFAM Glycosyltransferase family 28 C-terminal domain K03429 - 2.4.1.315 0.0000000000000000000000000000000000000000000000000000000000000002915 234.0
YHH3_k127_9224275_1 PFAM Nitroreductase - - - 0.00000000000000000000000000000000484 133.0
YHH3_k127_9224275_2 OsmC-like protein K09136 - - 0.0000000000000000000000001372 110.0
YHH3_k127_9224275_3 PFAM Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000001266 100.0
YHH3_k127_9224275_4 Glycogen recognition site of AMP-activated protein kinase - - - 0.00000000000003877 74.0
YHH3_k127_9224275_5 PFAM peptidase U32 K08303 - - 0.00000000002024 72.0
YHH3_k127_9305764_0 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 484.0
YHH3_k127_9305764_1 COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00162,K21417 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 383.0
YHH3_k127_9305764_2 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004578 319.0
YHH3_k127_9305764_4 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.0000000000000000002254 98.0
YHH3_k127_9360131_0 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000005664 204.0
YHH3_k127_9360131_1 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.00000000000000000000006548 99.0
YHH3_k127_9360534_0 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 496.0
YHH3_k127_9360534_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000119 292.0
YHH3_k127_9360534_2 Domain of unknown function (DUF4105) - - - 0.000000000000000000000000000000000000000000000000000000000009772 220.0
YHH3_k127_9360534_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.000000000000000000000000000000008063 132.0
YHH3_k127_9360534_4 Pfam Response regulator receiver - - - 0.000000000000004839 80.0
YHH3_k127_9479017_0 Transketolase K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 359.0
YHH3_k127_9479017_1 1-deoxy-D-xylulose-5-phosphate synthase K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000373 277.0
YHH3_k127_9479017_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000001013 186.0
YHH3_k127_9479017_3 Belongs to the SpoVG family K06412 - - 0.0000000000000000000000000003573 118.0
YHH3_k127_9493298_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 455.0
YHH3_k127_9493298_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 315.0
YHH3_k127_9493298_2 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000007323 242.0
YHH3_k127_9493298_3 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000006223 161.0
YHH3_k127_9493298_4 Polyketide cyclase / dehydrase and lipid transport K14670 - - 0.0000000000000000000000000000001968 128.0
YHH3_k127_9493298_5 Sugar (and other) transporter - - - 0.0000000000000000000000003335 116.0
YHH3_k127_9493298_7 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00006222 50.0
YHH3_k127_9493298_8 Psort location Cytoplasmic, score - - - 0.0002024 51.0
YHH3_k127_9511961_0 type II secretion system protein E K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 490.0
YHH3_k127_9511961_1 Type II secretion system K02653 - - 0.00000000000000000000000005729 114.0
YHH3_k127_9560311_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1163.0
YHH3_k127_9560311_1 Catalyzes the attachment of glycine to tRNA(Gly) K01880 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009345,GO:0009987,GO:0010467,GO:0016070,GO:0016594,GO:0016597,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042165,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046983,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 552.0
YHH3_k127_9560311_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004587 246.0
YHH3_k127_9560311_3 helix_turn _helix lactose operon repressor K02525,K02529 - - 0.0000000000000000000000000000000000000001807 160.0
YHH3_k127_9565374_0 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000007885 239.0
YHH3_k127_9590209_0 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005474 377.0
YHH3_k127_9590209_1 PFAM ABC transporter related K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000002585 229.0
YHH3_k127_9590209_2 adenosylcobinamide kinase adenosylcobinamide-phosphate guanylyltransferase K02231 - 2.7.1.156,2.7.7.62 0.0000000000000000000000000000000000000000001177 166.0
YHH3_k127_9590209_3 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000001373 136.0
YHH3_k127_9590209_4 PFAM Phosphoglycerate mutase K02226,K22305 - 3.1.3.3,3.1.3.73 0.00000000000000000000000005183 118.0
YHH3_k127_9665656_0 (ABC) transporter K19340 - - 0.0000000000000000000000000000000000000001249 160.0
YHH3_k127_9665656_1 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000139 114.0
YHH3_k127_9665656_2 Uncharacterised nucleotidyltransferase - - - 0.00000000000006786 81.0
YHH3_k127_9673505_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 505.0
YHH3_k127_9673505_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 444.0
YHH3_k127_9673505_2 Aminotransferase class-III K00821 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 415.0
YHH3_k127_9673505_3 TIGRFAM argininosuccinate lyase K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 375.0
YHH3_k127_9673505_4 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009808 340.0
YHH3_k127_9673505_5 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000591 336.0
YHH3_k127_9673505_6 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016020,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000001626 218.0
YHH3_k127_9673505_7 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000002492 87.0
YHH3_k127_970289_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.852e-203 650.0
YHH3_k127_970289_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008479 361.0
YHH3_k127_970289_2 protein conserved in bacteria K02029,K02030,K09769 GO:0003674,GO:0003824,GO:0004112,GO:0004113,GO:0008081,GO:0016787,GO:0016788,GO:0042578 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002819 293.0
YHH3_k127_970289_3 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000000000000000000000000000000128 209.0
YHH3_k127_970289_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000005378 67.0
YHH3_k127_9753686_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008182 310.0
YHH3_k127_9753686_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000002503 260.0
YHH3_k127_9753686_2 With S4 and S5 plays an important role in translational accuracy K02950 - - 0.00000000000000000000000000000000000000000000000000000000002298 209.0
YHH3_k127_9753686_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016020,GO:0016043,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - 0.0000000000000000000000000000000000000000000000000000000004121 205.0
YHH3_k127_9761958_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 1.747e-208 660.0
YHH3_k127_9761958_1 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0000000000000000000000000000001575 124.0
YHH3_k127_9840299_0 4-alpha-glucanotransferase - - - 0.000000000000000000000000000000000000000000000000000000002371 209.0
YHH3_k127_9840299_1 Oxygen tolerance - - - 0.000000000000000000000000000000004544 143.0
YHH3_k127_9845113_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0002682,GO:0002684,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006950,GO:0008150,GO:0009314,GO:0009380,GO:0009605,GO:0009607,GO:0009628,GO:0016020,GO:0032991,GO:0035821,GO:0042802,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0071944,GO:0075136,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 5.445e-241 765.0
YHH3_k127_9845113_1 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000002426 185.0
YHH3_k127_9845113_2 Nudix (nucleoside diphosphate linked moiety X)-type motif 12 K03426 GO:0000210,GO:0003674,GO:0003824,GO:0004551,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005777,GO:0005782,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006742,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009109,GO:0009117,GO:0009165,GO:0009166,GO:0009435,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019364,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019677,GO:0031907,GO:0031974,GO:0034356,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035529,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0051186,GO:0051187,GO:0051188,GO:0055086,GO:0070013,GO:0071704,GO:0072524,GO:0072525,GO:0072526,GO:0090407,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.22 0.000000006646 60.0
YHH3_k127_9896402_0 carbohydrate binding K00702 - 2.4.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000814 308.0
YHH3_k127_9896402_1 PFAM binding-protein-dependent transport systems inner membrane component K02026,K10119 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002386 284.0
YHH3_k127_9896402_2 PFAM binding-protein-dependent transport systems inner membrane component K02025,K05814,K10118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001006 284.0
YHH3_k127_9896402_3 Bacterial extracellular solute-binding protein K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004862 275.0
YHH3_k127_9896402_4 beta-galactosidase activity - - - 0.00000000000000000000000000000000000000000000000001642 205.0
YHH3_k127_9896402_5 Glycosyl hydrolases family 2, TIM barrel domain - - - 0.0000000000000000000000000002799 128.0
YHH3_k127_9896402_6 beta-galactosidase activity - - - 0.0000000000000001116 93.0
YHH3_k127_9896402_7 - - - - 0.000000001637 72.0
YHH3_k127_9934895_0 Belongs to the helicase family. UvrD subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000235 279.0
YHH3_k127_9934895_1 Belongs to the helicase family. UvrD subfamily - - - 0.000000000004599 76.0
YHH3_k127_9945189_0 galactose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 370.0
YHH3_k127_9945189_1 Domain of unknown function (DUF4921) K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 303.0
YHH3_k127_9945189_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000009623 99.0
YHH3_k127_9994635_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 2.548e-299 944.0
YHH3_k127_9994635_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.389e-194 621.0
YHH3_k127_9994635_2 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00928,K12524 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.3,2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005152 394.0
YHH3_k127_9994635_3 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000002577 233.0