Overview

ID MAG04607
Name YHH3_bin.86
Sample SMP0123
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Alphaproteobacteria
Order Rickettsiales
Family UBA6187
Genus 1-14-0-20-39-49
Species
Assembly information
Completeness (%) 80.0
Contamination (%) 1.5
GC content (%) 44.0
N50 (bp) 8,338
Genome size (bp) 1,728,902

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1537

Gene name Description KEGG GOs EC E-value Score Sequence
YHH3_k127_10235369_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008828 405.0
YHH3_k127_10235369_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007957 322.0
YHH3_k127_10235369_2 Histidine kinase K07716 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000005799 230.0
YHH3_k127_10252432_0 exopolysaccharide synthesis - - - 0.0000000000000000000000000000000000000000000000000001678 192.0
YHH3_k127_10252432_1 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000391 150.0
YHH3_k127_10252432_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.000000000000000003866 85.0
YHH3_k127_10252432_3 ankyrin repeat-containing protein K15502,K15503 - - 0.000000000839 68.0
YHH3_k127_10252432_4 Bacterial PH domain - - - 0.000000008648 64.0
YHH3_k127_10273629_0 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008566 346.0
YHH3_k127_10273629_1 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000004455 189.0
YHH3_k127_10273629_2 transglycosylase K08305 - - 0.000000000000000000000000000003674 121.0
YHH3_k127_10273629_3 Protein of unknown function (DUF3179) - - - 0.000000000000000001402 89.0
YHH3_k127_10531452_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 6.003e-283 882.0
YHH3_k127_10531452_1 SMART von Willebrand factor type A K09883 - 6.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 392.0
YHH3_k127_10531452_2 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 355.0
YHH3_k127_10531452_3 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009414 311.0
YHH3_k127_10531452_4 Putative transmembrane protein (Alph_Pro_TM) - - - 0.000000000000000000000000000000000000000000000000000000002205 208.0
YHH3_k127_10531452_5 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.000000000000000000000000000000000000000000000000000000002548 205.0
YHH3_k127_10531452_6 universal stress protein UspA and related nucleotide-binding - - - 0.00000000000000000000001561 106.0
YHH3_k127_10531452_7 Pfam Methyltransferase - - - 0.0000000000000000000001058 102.0
YHH3_k127_10531452_8 STAS domain K04749 - - 0.000000001175 63.0
YHH3_k127_10581749_0 DEAD-like helicases superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008057 480.0
YHH3_k127_10581749_1 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 468.0
YHH3_k127_10581749_2 Resolvase K06400 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009536 452.0
YHH3_k127_10581749_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001985 261.0
YHH3_k127_10581749_4 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000000000000000000000000000000001026 244.0
YHH3_k127_10581749_5 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000000000000708 178.0
YHH3_k127_10581749_6 - - - - 0.00000000000000000000000000000000000000001326 158.0
YHH3_k127_10581749_7 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000001346 148.0
YHH3_k127_10581749_8 Sigma-70 region 2 K03088,K03091 - - 0.00000000000000000001117 99.0
YHH3_k127_10581749_9 Protein of unknown function (DUF2924) - - - 0.000000000000000001184 86.0
YHH3_k127_10681685_0 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 391.0
YHH3_k127_10681685_1 RTX toxins and related Ca2 binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000867 399.0
YHH3_k127_10681685_2 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 364.0
YHH3_k127_10681685_3 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000001872 242.0
YHH3_k127_10681685_4 Esterase PHB depolymerase K03932 - - 0.000000000000000000000000000000000000000000000000000000009956 209.0
YHH3_k127_10681685_5 PhnA Zinc-Ribbon K06193 - - 0.00000000000000000000000000000000000000000001457 165.0
YHH3_k127_10681685_6 Cytochrome b561 K12262 - - 0.00000000000000000000000000000000000000001497 159.0
YHH3_k127_10681685_7 4'-phosphopantetheinyl transferase superfamily K00997,K06133 - 2.7.8.7 0.000000000000000000000005251 110.0
YHH3_k127_10681685_8 spectrin binding - - - 0.00000000001595 72.0
YHH3_k127_10681685_9 Outer membrane efflux protein K12340 - - 0.00000005499 62.0
YHH3_k127_10684173_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 1.338e-226 707.0
YHH3_k127_10684173_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 4.264e-211 660.0
YHH3_k127_10684173_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331,K03940 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005011 322.0
YHH3_k127_10684173_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity) K00334,K03943 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003896 276.0
YHH3_k127_10684173_4 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K00332 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001299 270.0
YHH3_k127_10684173_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000009684 199.0
YHH3_k127_10684173_6 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 0.00000000000000000000001269 100.0
YHH3_k127_10684173_7 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.0000000000000000000002054 108.0
YHH3_k127_10684173_8 HicA toxin of bacterial toxin-antitoxin, - - - 0.0001812 47.0
YHH3_k127_10706328_0 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 291.0
YHH3_k127_10706328_1 COG1253 Hemolysins and related proteins containing CBS domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001107 267.0
YHH3_k127_10706328_2 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000000000003466 142.0
YHH3_k127_10706328_3 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000001719 108.0
YHH3_k127_10748321_0 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.000000000000000000000000000000000000000000000000004382 185.0
YHH3_k127_10748321_1 Cro/C1-type HTH DNA-binding domain - - - 0.000006426 54.0
YHH3_k127_10748321_2 Uncharacterized protein conserved in bacteria (DUF2125) - - - 0.0001178 54.0
YHH3_k127_10820183_0 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 516.0
YHH3_k127_10820183_1 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004235 467.0
YHH3_k127_10820183_2 drug resistance transporter Bcr CflA subfamily K07552 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 370.0
YHH3_k127_10853497_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 494.0
YHH3_k127_10853497_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004781 442.0
YHH3_k127_10853497_2 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.0000000000000002745 87.0
YHH3_k127_10853497_3 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000001617 76.0
YHH3_k127_10853497_4 transcriptional regulator - - - 0.00000000003403 64.0
YHH3_k127_10894168_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.541e-196 621.0
YHH3_k127_10894168_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 344.0
YHH3_k127_10894168_2 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000001331 206.0
YHH3_k127_10894168_3 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000009007 187.0
YHH3_k127_10894168_4 PFAM Cys Met metabolism pyridoxal-phosphate-dependent protein K01740 - 2.5.1.49 0.00000000000000000000000000000000000000001719 154.0
YHH3_k127_1091803_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 558.0
YHH3_k127_1091803_1 PhoH-like protein K06217 - - 0.00000000000004329 74.0
YHH3_k127_1091803_2 Helix-turn-helix XRE-family like proteins - - - 0.0000005163 55.0
YHH3_k127_10935788_0 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 471.0
YHH3_k127_10935788_1 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000006986 205.0
YHH3_k127_10935788_2 Cold shock K03704 - - 0.00000000000000000000000002823 110.0
YHH3_k127_10935788_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000008157 86.0
YHH3_k127_10935788_4 Protein of unknown function (DUF2806) - - - 0.0000000000007908 74.0
YHH3_k127_10976706_0 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 542.0
YHH3_k127_10976706_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 532.0
YHH3_k127_10976706_2 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004798 296.0
YHH3_k127_10976706_3 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000568 228.0
YHH3_k127_10976706_4 chorismate mutase - - - 0.0000000000000000000000000003436 124.0
YHH3_k127_10976706_5 Sel1-like repeats. K07126 - - 0.00000000000000000004659 98.0
YHH3_k127_10976706_6 Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol K15520 GO:0000302,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006950,GO:0006979,GO:0008080,GO:0008150,GO:0008152,GO:0009058,GO:0009268,GO:0009628,GO:0009636,GO:0009987,GO:0010035,GO:0010125,GO:0010126,GO:0010447,GO:0016137,GO:0016138,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0033554,GO:0034599,GO:0034614,GO:0035447,GO:0035690,GO:0040007,GO:0042221,GO:0042493,GO:0042542,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044237,GO:0044249,GO:0044272,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051186,GO:0051188,GO:0051704,GO:0051716,GO:0070301,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071468,GO:0071704,GO:0097237,GO:0104004,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659,GO:1901700,GO:1901701 2.3.1.189 0.00005483 53.0
YHH3_k127_10976706_7 Pentapeptide repeats (9 copies) - - - 0.00007279 50.0
YHH3_k127_10988234_0 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 510.0
YHH3_k127_10988234_1 Phosphoserine phosphatase K01079 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000004111 249.0
YHH3_k127_10988234_2 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000000000000000000000005542 187.0
YHH3_k127_10988234_3 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000000000000000001407 158.0
YHH3_k127_10988234_4 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000001792 124.0
YHH3_k127_11043165_0 Plays a role in the flagellum-specific transport system K02419 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 297.0
YHH3_k127_11043165_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000001404 231.0
YHH3_k127_11043165_2 Mitochondrial biogenesis AIM24 - - - 0.00000000000000000000000000000000000000002244 166.0
YHH3_k127_11043165_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000009814 141.0
YHH3_k127_11043165_4 Response regulator receiver domain K03413 - - 0.00000000000000003491 87.0
YHH3_k127_11043165_5 Flagellar biosynthesis protein, FliO K02418 - - 0.000000000000001105 79.0
YHH3_k127_11043165_6 Domains REC, sigma54 interaction, HTH8 - - - 0.0000000000006162 79.0
YHH3_k127_11133276_0 PAS PAC domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008646 501.0
YHH3_k127_11133276_1 phosphotransferase related to Ser Thr protein kinases K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008039 282.0
YHH3_k127_11133276_2 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001335 239.0
YHH3_k127_11133276_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaD and TsaB. TsaE seems to play an indirect role in the t(6)A biosynthesis pathway, possibly in regulating the core enzymatic function of TsaD (By similarity) K06925 - - 0.0000000000000000000000000000000000000002254 153.0
YHH3_k127_11187980_0 2 iron, 2 sulfur cluster binding K00207,K00219,K00317,K00528,K02293,K02823,K05368,K10797 - 1.16.1.3,1.18.1.2,1.19.1.1,1.3.1.2,1.3.1.31,1.3.1.34,1.3.5.5,1.5.1.41,1.5.8.1,1.5.8.2 1.505e-260 817.0
YHH3_k127_11187980_1 Adenylylsulphate kinase K00955 - 2.7.1.25,2.7.7.4 1.226e-251 791.0
YHH3_k127_11187980_10 lysine biosynthetic process via aminoadipic acid - - - 0.000000004388 69.0
YHH3_k127_11187980_2 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00381,K00392 - 1.8.1.2,1.8.7.1 2.207e-202 645.0
YHH3_k127_11187980_3 asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 445.0
YHH3_k127_11187980_4 Phosphoadenosine phosphosulfate reductase family K00957 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 361.0
YHH3_k127_11187980_5 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000001473 224.0
YHH3_k127_11187980_6 Glycosyltransferase, group 2 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000001538 225.0
YHH3_k127_11187980_7 NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000009873 184.0
YHH3_k127_11187980_8 Sirohaem biosynthesis protein central K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000005868 155.0
YHH3_k127_11187980_9 PFAM S23 ribosomal protein - - - 0.00000000000000000000000000001729 123.0
YHH3_k127_11225210_0 Beta-Casp domain K07576 - - 3.868e-195 618.0
YHH3_k127_11225210_1 thymidine phosphorylase activity K00758 - 2.4.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 609.0
YHH3_k127_11225210_10 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008125 253.0
YHH3_k127_11225210_11 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009326 243.0
YHH3_k127_11225210_12 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000003033 257.0
YHH3_k127_11225210_13 Oxygen tolerance - - - 0.000000000000000000000000000000000000000000000000008894 201.0
YHH3_k127_11225210_14 Periplasmic or secreted lipoprotein - - - 0.00000000000000000000000000000000000000000000004791 175.0
YHH3_k127_11225210_15 Bacterial transglutaminase-like cysteine proteinase BTLCP - - - 0.0000000000000000000000000000000000000001305 158.0
YHH3_k127_11225210_16 - - - - 0.00000000000000000000000000000000002559 144.0
YHH3_k127_11225210_17 Domain of unknown function (DUF4381) - - - 0.0000000000000000000000000004881 119.0
YHH3_k127_11225210_18 Pfam Tetratricopeptide K07114 - - 0.00000000000000002636 96.0
YHH3_k127_11225210_19 Protein required for attachment to host cells - - - 0.0000002353 59.0
YHH3_k127_11225210_2 Erythromycin esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 543.0
YHH3_k127_11225210_3 COG0714 MoxR-like ATPases K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004492 406.0
YHH3_k127_11225210_4 COGs COG0462 Phosphoribosylpyrophosphate synthetase K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005648 385.0
YHH3_k127_11225210_5 Phosphate ATP-binding cassette transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 377.0
YHH3_k127_11225210_6 hemolysin activation secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 354.0
YHH3_k127_11225210_7 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 335.0
YHH3_k127_11225210_8 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004262 286.0
YHH3_k127_11225210_9 PFAM von Willebrand factor type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000168 271.0
YHH3_k127_11306240_0 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006729 435.0
YHH3_k127_11306240_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 389.0
YHH3_k127_11306240_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008277 337.0
YHH3_k127_11376275_0 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 395.0
YHH3_k127_11376275_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000005641 167.0
YHH3_k127_11376275_2 Belongs to the CinA family K03743 - 3.5.1.42 0.0000000000000000000000000000000000000005832 154.0
YHH3_k127_11376275_3 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000000001148 129.0
YHH3_k127_11568128_0 DeoC/LacD family aldolase K01635 - 4.1.2.40 0.000000000000000000000000000000000000007047 156.0
YHH3_k127_11568128_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 GO:0000270,GO:0000271,GO:0003674,GO:0003824,GO:0003977,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006629,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009252,GO:0009273,GO:0009987,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0030203,GO:0033692,GO:0034637,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0070569,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509 2.3.1.157,2.7.7.23 0.00000000000000000000000000000001361 133.0
YHH3_k127_11568128_2 COG NOG14600 non supervised orthologous group - - - 0.000000000000000000000001268 106.0
YHH3_k127_11568128_3 COG NOG38524 non supervised orthologous group - - - 0.000000000000000001237 87.0
YHH3_k127_11568128_4 non supervised orthologous group - - - 0.00000000000000001076 83.0
YHH3_k127_11568128_5 Unextendable partial coding region - - - 0.000000002194 59.0
YHH3_k127_11568128_6 - - - - 0.00000002394 56.0
YHH3_k127_11568128_8 Haloacid dehalogenase-like hydrolase K07025 - - 0.000007423 55.0
YHH3_k127_11568128_9 COG NOG15344 non supervised orthologous group - - - 0.000009638 51.0
YHH3_k127_11615236_0 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 3.216e-261 820.0
YHH3_k127_11615236_1 COG1008 NADH ubiquinone oxidoreductase subunit 4 (chain M) K00342 - 1.6.5.3 4.393e-202 640.0
YHH3_k127_11615236_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 481.0
YHH3_k127_11615236_3 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 306.0
YHH3_k127_11615236_4 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000086 213.0
YHH3_k127_11615236_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000008664 198.0
YHH3_k127_11615236_6 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000004442 186.0
YHH3_k127_11615236_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.00000000000000000000000000000000000000003192 154.0
YHH3_k127_11635907_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 443.0
YHH3_k127_11635907_1 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006787 413.0
YHH3_k127_11635907_2 PFAM tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005435 395.0
YHH3_k127_11635907_3 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001643 278.0
YHH3_k127_11635907_4 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.000000000000000000000000000000000000000000000000000003359 205.0
YHH3_k127_11635907_5 - - - - 0.000000000000001108 79.0
YHH3_k127_11686982_0 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 409.0
YHH3_k127_11686982_1 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003891 274.0
YHH3_k127_11686982_2 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000004869 175.0
YHH3_k127_11686982_3 Pfam Methyltransferase - - - 0.000000000000000008936 87.0
YHH3_k127_11691250_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 2.961e-199 630.0
YHH3_k127_11691250_1 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007923 300.0
YHH3_k127_11691250_2 Beta-eliminating lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000003943 253.0
YHH3_k127_11691250_3 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.00000000000000000000000000000000000000000000000003051 182.0
YHH3_k127_11691250_4 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000001391 132.0
YHH3_k127_11781536_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004271 358.0
YHH3_k127_11781536_1 Bacterial type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 361.0
YHH3_k127_11781536_2 - K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006021 244.0
YHH3_k127_11781536_3 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000009965 229.0
YHH3_k127_11781536_4 Type IV leader peptidase family K02654 - 3.4.23.43 0.00000000000000000000000000000000003031 144.0
YHH3_k127_11781536_5 general secretion pathway protein - - - 0.00000000000000000000000000000001988 139.0
YHH3_k127_11781536_6 general secretion pathway protein - - - 0.00000000000000000001877 102.0
YHH3_k127_11876435_0 Hydrophobe Amphiphile Efflux-1 (HAE1) Family K03296 - - 0.0 1352.0
YHH3_k127_11876435_1 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family K18139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006596 429.0
YHH3_k127_11876435_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0006869,GO:0008150,GO:0010876,GO:0015238,GO:0015711,GO:0015718,GO:0015721,GO:0015849,GO:0015850,GO:0015893,GO:0016020,GO:0022857,GO:0031224,GO:0031226,GO:0033036,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0046942,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 357.0
YHH3_k127_11876435_3 Transcriptional regulator K07667 - - 0.0000000000000000000000000000000000000000001061 162.0
YHH3_k127_11876435_4 MAATS-type transcriptional repressor, C-terminal region K03577,K18135 - - 0.00000000000000000000000000002133 119.0
YHH3_k127_11891391_0 Domain of unknown function (DUF2610) - - - 0.000000000000000000000000000001879 123.0
YHH3_k127_11891391_1 Bacterial extracellular solute-binding protein K02020 - - 0.00000000000000000000000000002592 127.0
YHH3_k127_11891391_2 general secretion pathway protein - - - 0.00000000000001168 82.0
YHH3_k127_11891391_3 general secretion pathway protein - - - 0.00000000000003469 87.0
YHH3_k127_11903650_0 COG1073 Hydrolases of the alpha beta superfamily K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000459 222.0
YHH3_k127_11903650_1 Nucleotidyl transferase K00966,K00992 - 2.7.7.13,2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000886 213.0
YHH3_k127_11903650_2 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000004273 109.0
YHH3_k127_1192759_0 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004316 565.0
YHH3_k127_1192759_1 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007996 370.0
YHH3_k127_1192759_10 PFAM cation efflux protein - - - 0.0000000000000000000000000000000000000000000000000002764 189.0
YHH3_k127_1192759_11 translation initiation inhibitor, yjgF family - - - 0.000000000000000000000000000000000000000000000000001701 186.0
YHH3_k127_1192759_12 KR domain - - - 0.00000000000000000000000000000000000000000000005994 177.0
YHH3_k127_1192759_13 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000006411 176.0
YHH3_k127_1192759_14 RmlD substrate binding domain - - - 0.00000000000000000000000000000000000000005044 163.0
YHH3_k127_1192759_15 PFAM phosphatidate cytidylyltransferase - - - 0.0000000000000000000000000000002026 131.0
YHH3_k127_1192759_16 Copper chaperone PCu(A)C - - - 0.000000000000000000000364 101.0
YHH3_k127_1192759_17 3-beta hydroxysteroid dehydrogenase/isomerase family K01784,K02473,K03274 - 5.1.3.2,5.1.3.20,5.1.3.7 0.00000000000001229 75.0
YHH3_k127_1192759_2 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 348.0
YHH3_k127_1192759_3 Beta-eliminating lyase K13010 - 2.6.1.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 340.0
YHH3_k127_1192759_4 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008988,GO:0009451,GO:0009987,GO:0010467,GO:0015976,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036307,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.266 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 306.0
YHH3_k127_1192759_5 Oxidoreductase family, NAD-binding Rossmann fold K13018 - 2.3.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 297.0
YHH3_k127_1192759_6 Repeat of Unknown Function (DUF347) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 287.0
YHH3_k127_1192759_7 Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I K02258 GO:0008150,GO:0008535,GO:0009987,GO:0016043,GO:0017004,GO:0022607,GO:0034622,GO:0043933,GO:0044085,GO:0065003,GO:0071840 - 0.000000000000000000000000000000000000000000000000000000000000000000001226 244.0
YHH3_k127_1192759_8 Hexapeptide repeat of succinyl-transferase - - - 0.000000000000000000000000000000000000000000000000000000000001172 216.0
YHH3_k127_1192759_9 UbiA prenyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000002803 213.0
YHH3_k127_12060033_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 472.0
YHH3_k127_12060033_1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006441 436.0
YHH3_k127_12060033_10 Thioredoxin - - - 0.0000000000000000000000000000000000000000002359 168.0
YHH3_k127_12060033_11 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000003986 141.0
YHH3_k127_12060033_12 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000008809 128.0
YHH3_k127_12060033_13 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000002642 66.0
YHH3_k127_12060033_2 malonyl CoA-acyl carrier protein transacylase K00645,K15327 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 374.0
YHH3_k127_12060033_3 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 378.0
YHH3_k127_12060033_4 EAL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 319.0
YHH3_k127_12060033_5 Transcriptional regulator - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004926 297.0
YHH3_k127_12060033_6 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000002011 211.0
YHH3_k127_12060033_7 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 3.6.4.12 0.0000000000000000000000000000000000000000000000000001701 192.0
YHH3_k127_12060033_8 PFAM alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000001691 183.0
YHH3_k127_12060033_9 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000000000000000000000003472 183.0
YHH3_k127_1208603_0 ABC transporter K06158 - - 2.605e-253 795.0
YHH3_k127_1208603_1 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 8.957e-237 751.0
YHH3_k127_1208603_2 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 431.0
YHH3_k127_1208603_3 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000000000007679 223.0
YHH3_k127_1208603_4 Transcription elongation factor, GreA/GreB, C-term - - - 0.0000000000000000000000000000000000007483 144.0
YHH3_k127_1208603_5 Superoxide dismutase K04565 - 1.15.1.1 0.0000000000000000000001012 104.0
YHH3_k127_12160647_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 612.0
YHH3_k127_12160647_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009774 522.0
YHH3_k127_12160647_2 Thiol disulfide interchange protein K04084,K08344 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006448 496.0
YHH3_k127_12160647_3 Glycine cleavage system T protein K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 385.0
YHH3_k127_12160647_4 COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit K01029 - 2.8.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612 318.0
YHH3_k127_12160647_5 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000001983 156.0
YHH3_k127_12160647_6 3-oxoacid CoA-transferase, a subunit K01027,K01028,K01031,K01034 - 2.8.3.5,2.8.3.6,2.8.3.8,2.8.3.9 0.00000000000000003944 81.0
YHH3_k127_12160647_7 cellulose binding K01179,K01216,K21449 - 3.2.1.4,3.2.1.73 0.00004458 57.0
YHH3_k127_12160647_8 ERAD pathway - - - 0.0000684 53.0
YHH3_k127_12329779_0 Phosphoribosyl synthetase-associated domain K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008012 447.0
YHH3_k127_12329779_1 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005627 335.0
YHH3_k127_12329779_2 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000007778 218.0
YHH3_k127_12329779_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000001769 214.0
YHH3_k127_12329779_4 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000000000005548 168.0
YHH3_k127_12361771_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 5.525e-218 686.0
YHH3_k127_12361771_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.155e-213 672.0
YHH3_k127_12361771_10 Prepilin-type N-terminal cleavage methylation domain-containing protein - - - 0.000000000000000000000002744 111.0
YHH3_k127_12361771_11 PemK-like, MazF-like toxin of type II toxin-antitoxin system - - - 0.00000000000000000000003668 105.0
YHH3_k127_12361771_2 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 550.0
YHH3_k127_12361771_3 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006177 328.0
YHH3_k127_12361771_4 COG0451 Nucleoside-diphosphate-sugar epimerases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007186 321.0
YHH3_k127_12361771_5 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.000000000000000000000000000000000000007351 151.0
YHH3_k127_12361771_6 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000005654 138.0
YHH3_k127_12361771_7 Endonuclease containing a URI domain K07461 - - 0.000000000000000000000000000000006253 129.0
YHH3_k127_12361771_8 Prepilin-type N-terminal cleavage methylation domain-containing protein - - - 0.000000000000000000000000001946 122.0
YHH3_k127_12361771_9 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000009225 109.0
YHH3_k127_12455578_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003688 530.0
YHH3_k127_12455578_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 448.0
YHH3_k127_12455578_10 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000002195 109.0
YHH3_k127_12455578_11 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000008051 76.0
YHH3_k127_12455578_2 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 407.0
YHH3_k127_12455578_3 Belongs to the peptidase M16 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 388.0
YHH3_k127_12455578_4 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005769 319.0
YHH3_k127_12455578_5 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000000002077 249.0
YHH3_k127_12455578_6 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000005458 196.0
YHH3_k127_12455578_7 glycosyl transferase K07011 - - 0.00000000000000000000000000000000000000000000000002382 192.0
YHH3_k127_12455578_8 Binds to the 23S rRNA K02939 - - 0.00000000000000000000000000000000000000000001249 169.0
YHH3_k127_12455578_9 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000000000003996 132.0
YHH3_k127_1247278_0 type IV secretion system protein K03201 - - 0.000000000000000000000000000000000000000001927 181.0
YHH3_k127_1247278_1 type IV secretion system K03201 - - 0.000000000000000000000000000000000000039 166.0
YHH3_k127_1247278_2 type IV secretion system protein K03201 - - 0.000000000000000000000000000000004033 148.0
YHH3_k127_1247278_3 Alpha-tubulin suppressor and related RCC1 domain-containing proteins - - - 0.0002699 44.0
YHH3_k127_12483908_0 Dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 456.0
YHH3_k127_12483908_1 Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009893,GO:0009987,GO:0019216,GO:0019222,GO:0019747,GO:0031323,GO:0031325,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0045828,GO:0045834,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0065007,GO:0071704,GO:0080090,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000006824 228.0
YHH3_k127_12483908_2 Protein of unknown function (DUF559) K07316 - 2.1.1.72 0.00000000000000000000000000000000003097 137.0
YHH3_k127_12483908_3 Protocatechuate 3,4-dioxygenase beta subunit K00449 - 1.13.11.3 0.000000000000000000000000000000008835 138.0
YHH3_k127_12483908_4 Conserved repeat domain - - - 0.0000000241 66.0
YHH3_k127_12577232_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1309.0
YHH3_k127_12577232_1 Glycine cleavage T-protein C-terminal barrel domain K06980 - - 0.0000000000000000000000000000000001621 140.0
YHH3_k127_12577232_2 Mechanosensitive Ion channel K03442 - - 0.00000000000000000000000002285 114.0
YHH3_k127_12577232_3 proline dehydrogenase activity K00286,K00318,K11394,K14454 GO:0000166,GO:0001101,GO:0003674,GO:0003824,GO:0004657,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006560,GO:0006562,GO:0006807,GO:0006950,GO:0006952,GO:0006970,GO:0006979,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009084,GO:0009414,GO:0009415,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009987,GO:0010035,GO:0010133,GO:0016053,GO:0016054,GO:0016491,GO:0016645,GO:0019752,GO:0031974,GO:0036094,GO:0042221,GO:0042742,GO:0043167,GO:0043168,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046395,GO:0046483,GO:0046700,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051704,GO:0051707,GO:0055114,GO:0070013,GO:0071704,GO:0071949,GO:0097159,GO:0098542,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901700 1.5.1.2,1.5.5.3,2.6.1.1 0.00000000000000000000000003158 122.0
YHH3_k127_12577232_4 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000001869 81.0
YHH3_k127_12628597_0 Aminotransferase class-III K01845 - 5.4.3.8 1.762e-251 792.0
YHH3_k127_12628597_1 DegT DnrJ EryC1 StrS aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006538 439.0
YHH3_k127_12714373_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003946 398.0
YHH3_k127_12714373_1 Histidine biosynthesis protein K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007128 317.0
YHH3_k127_12714373_2 Phosphoribosyl-ATP K01523 - 3.6.1.31 0.0000000000000000000000000005588 116.0
YHH3_k127_12719967_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005083 564.0
YHH3_k127_12719967_1 Cobaltochelatase CobS subunit N terminal K09882 - 6.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002895 273.0
YHH3_k127_12719967_2 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000007839 191.0
YHH3_k127_12719967_3 DnaJ molecular chaperone homology domain - - - 0.000000000000000000000000001461 121.0
YHH3_k127_12836337_0 Belongs to the glutamate synthase family - - - 8.55e-201 638.0
YHH3_k127_12836337_1 ankyrin 3, node of Ranvier (ankyrin G) - - - 0.0000000000000000000000007998 117.0
YHH3_k127_12836337_2 PFAM chorismate binding K01665,K03342 - 2.6.1.85,4.1.3.38 0.0001758 50.0
YHH3_k127_12838212_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.456e-284 888.0
YHH3_k127_12838212_1 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 595.0
YHH3_k127_12838212_11 Protein of unknown function (DUF1189) - - - 0.000000000332 72.0
YHH3_k127_12838212_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009199 451.0
YHH3_k127_12838212_3 Type II secretion system (T2SS), protein F K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 445.0
YHH3_k127_12838212_4 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 445.0
YHH3_k127_12838212_5 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000004649 263.0
YHH3_k127_12838212_6 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000006053 190.0
YHH3_k127_12838212_7 protein conserved in bacteria K09985 - - 0.0000000000000000000000000000000000000000000000008666 179.0
YHH3_k127_12838212_8 - - - - 0.000000000000000000000001817 109.0
YHH3_k127_12838212_9 protein homooligomerization - - - 0.000000000000000000000009451 116.0
YHH3_k127_12881968_0 DNA helicase K03657 - 3.6.4.12 1.489e-259 819.0
YHH3_k127_12881968_1 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000000000000000008101 205.0
YHH3_k127_12881968_2 protein involved in outer membrane biogenesis - - - 0.00000000000000001719 95.0
YHH3_k127_1377169_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 585.0
YHH3_k127_1377169_1 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 541.0
YHH3_k127_1377169_2 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 333.0
YHH3_k127_1377169_3 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008364 275.0
YHH3_k127_1377169_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000219 250.0
YHH3_k127_1377169_5 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000002457 237.0
YHH3_k127_1377169_6 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000000000000000000000000000000000000004056 196.0
YHH3_k127_1377169_7 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000247 135.0
YHH3_k127_1377169_8 - - - - 0.00000000005502 68.0
YHH3_k127_1415597_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 591.0
YHH3_k127_1415597_1 Electron transfer flavoprotein FAD-binding domain K03522 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 392.0
YHH3_k127_1415597_2 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 367.0
YHH3_k127_1415597_3 Uncharacterized BCR, YaiI/YqxD family COG1671 K09768 - - 0.00000000000000000000000000000000000000000000000002128 183.0
YHH3_k127_1415597_4 RNA recognition motif - - - 0.000000000000000001357 88.0
YHH3_k127_1445794_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 370.0
YHH3_k127_1445794_1 Belongs to the BI1 family K06890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005785 273.0
YHH3_k127_1445794_2 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000007688 156.0
YHH3_k127_1445794_3 PQ loop repeat K15383 - - 0.000000000000000000003628 95.0
YHH3_k127_1445794_4 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000002114 77.0
YHH3_k127_1445794_5 Serine aminopeptidase, S33 K06889 - - 0.0001627 53.0
YHH3_k127_1564620_0 MgsA AAA+ ATPase C terminal K07478 GO:0005575,GO:0005622,GO:0005623,GO:0005657,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0030894,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 558.0
YHH3_k127_1564620_1 Belongs to the peptidase S1C family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 294.0
YHH3_k127_1564620_2 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004911 294.0
YHH3_k127_1564620_3 Belongs to the peptidase S11 family K01286 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000001271 247.0
YHH3_k127_1564620_4 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000000000000000001864 121.0
YHH3_k127_1572938_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 4.466e-289 900.0
YHH3_k127_1572938_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 357.0
YHH3_k127_1572938_2 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0015035,GO:0015036,GO:0016491,GO:0016667,GO:0033218,GO:0042277,GO:0043167,GO:0043168,GO:0043295,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0055114,GO:0072341,GO:1900750,GO:1901681 - 0.000000000000002827 76.0
YHH3_k127_1606644_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007482 511.0
YHH3_k127_1606644_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007074 373.0
YHH3_k127_1606644_2 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000001178 164.0
YHH3_k127_1606644_3 ABC transporter, ATP-binding protein K01990 - - 0.0000000000000000000000000000000000000002053 152.0
YHH3_k127_1606644_4 Belongs to the BolA IbaG family - - - 0.000000000000000000000001486 104.0
YHH3_k127_1606644_5 Type II secretion system (T2SS), protein G K02456 - - 0.0006972 44.0
YHH3_k127_1667146_0 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005724 477.0
YHH3_k127_1667146_1 Acetyl-coenzyme A transporter 1 K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 439.0
YHH3_k127_1667146_2 COG0524 Sugar kinases, ribokinase family K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 368.0
YHH3_k127_1667146_3 phosphate regulon transcriptional regulatory protein PhoB K07657,K07659 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001213 276.0
YHH3_k127_1667146_4 Competence protein K02238 - - 0.00000000000000000000000000000000000002405 155.0
YHH3_k127_1667146_5 - - - - 0.00000000000000000000000000000000000005573 146.0
YHH3_k127_1681489_0 PFAM Alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 343.0
YHH3_k127_1681489_1 protein conserved in bacteria K09987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005224 241.0
YHH3_k127_1681489_2 Helix-turn-helix domain - - - 0.00000000000000000000000000000000002015 139.0
YHH3_k127_1681489_3 Fe-S metabolism associated domain K02426,K22066 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0008047,GO:0008150,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0030234,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044093,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050790,GO:0065007,GO:0065009,GO:0098772 - 0.0000000000000000000123 94.0
YHH3_k127_1681489_4 of ABC transporters with duplicated ATPase K15738 - - 0.00000000001082 68.0
YHH3_k127_1719837_0 PFAM N-acetylneuraminic acid synthase K01654,K15898 - 2.5.1.56,2.5.1.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 512.0
YHH3_k127_1719837_1 COG0642 Signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 311.0
YHH3_k127_1719837_2 COG3980 Spore coat polysaccharide biosynthesis protein - - - 0.00000000000000000000001375 108.0
YHH3_k127_1719837_3 Histidine kinase - - - 0.00000000001881 66.0
YHH3_k127_1731169_0 GTA TIM-barrel-like domain - - - 0.0 1155.0
YHH3_k127_1731169_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 576.0
YHH3_k127_1731169_2 Protein of unknown function (DUF2793) - - - 0.000000000000000000000000000000000000000000000000366 191.0
YHH3_k127_1731169_3 NLP P60 protein - - - 0.00000000000000000000000000000000008806 138.0
YHH3_k127_1731169_4 - - - - 0.000000000000000000000000000000304 126.0
YHH3_k127_1731169_5 - - - - 0.000000000000000000000000001072 118.0
YHH3_k127_1731169_6 - - - - 0.00000000000000003757 87.0
YHH3_k127_1731169_7 - - - - 0.000000003923 66.0
YHH3_k127_1731169_8 Predicted membrane protein (DUF2335) - - - 0.0002045 50.0
YHH3_k127_1845615_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 1.558e-218 683.0
YHH3_k127_1845615_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000002902 127.0
YHH3_k127_1845615_2 TM2 domain - - - 0.0000000000009551 72.0
YHH3_k127_1851731_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 3.447e-265 832.0
YHH3_k127_1851731_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 458.0
YHH3_k127_1851731_10 ubiE/COQ5 methyltransferase family - - - 0.000000001245 69.0
YHH3_k127_1851731_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003495 439.0
YHH3_k127_1851731_3 RNA polymerase sigma K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 315.0
YHH3_k127_1851731_4 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 311.0
YHH3_k127_1851731_5 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005216 279.0
YHH3_k127_1851731_6 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000005585 204.0
YHH3_k127_1851731_7 NUDIX domain K03574 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.6.1.55 0.000000000000000000000000000000000000000000001824 168.0
YHH3_k127_1851731_8 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000003003 175.0
YHH3_k127_1851731_9 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000001048 145.0
YHH3_k127_1879209_0 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00162 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008773 523.0
YHH3_k127_1879209_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 460.0
YHH3_k127_1879209_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004372 434.0
YHH3_k127_1879209_3 methylated-DNA-[protein]-cysteine S-methyltransferase activity K00567 - 2.1.1.63 0.00000000000000000000000000000000003169 136.0
YHH3_k127_1886117_0 SIR2-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 457.0
YHH3_k127_1890780_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 7.991e-288 905.0
YHH3_k127_1890780_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 300.0
YHH3_k127_1890780_2 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000001056 140.0
YHH3_k127_1890780_3 - - - - 0.000000006668 57.0
YHH3_k127_1890780_4 (Lipo)protein K07121 - - 0.0001562 54.0
YHH3_k127_2019414_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 573.0
YHH3_k127_2019414_1 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003221 259.0
YHH3_k127_2019414_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000004199 61.0
YHH3_k127_2073306_0 signal transduction histidine kinase K13587 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003978 547.0
YHH3_k127_2073306_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003715 323.0
YHH3_k127_2073306_2 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009175 244.0
YHH3_k127_2073306_3 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000004443 240.0
YHH3_k127_2073306_4 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K21563 - - 0.00000000000000000000000000000000000000000000143 174.0
YHH3_k127_2073306_5 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000009627 112.0
YHH3_k127_2073306_6 MerR HTH family regulatory protein - - - 0.00000000000000000000000007295 114.0
YHH3_k127_2073306_7 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000001469 85.0
YHH3_k127_2193715_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 4.616e-217 691.0
YHH3_k127_2193715_1 Aminotransferase class-III K00819 - 2.6.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 531.0
YHH3_k127_2193715_2 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008371 429.0
YHH3_k127_2193715_3 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004448 421.0
YHH3_k127_2193715_4 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000237 271.0
YHH3_k127_2193715_5 Belongs to the arginase family K01476,K01480,K12255,K18459 - 3.5.3.1,3.5.3.11,3.5.3.17,3.5.3.7 0.000000000000000000000000000000000000000000000000000000000000000000008694 243.0
YHH3_k127_2193715_6 Belongs to the flagella basal body rod proteins family K02388 - - 0.000000002731 64.0
YHH3_k127_2249997_0 Belongs to the helicase family. UvrD subfamily K16898 - 3.6.4.12 2.347e-223 721.0
YHH3_k127_2249997_1 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000002158 158.0
YHH3_k127_2249997_2 glutamine synthetase K01915 - 6.3.1.2 0.000000000000000000000000000000000000000002512 164.0
YHH3_k127_2376606_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1016.0
YHH3_k127_2376606_1 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.000000000000000000000000000000000000000000000000000002528 205.0
YHH3_k127_24716_0 Phage major capsid protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 439.0
YHH3_k127_24716_1 - - - - 0.000000000000000000000002146 109.0
YHH3_k127_24716_2 Phage gp6-like head-tail connector protein - - - 0.0000000000000000000002547 103.0
YHH3_k127_24716_3 tail protein - - - 0.000000000000000000003568 98.0
YHH3_k127_24716_4 TIGRFAM phage head-tail adaptor - - - 0.000000000001375 72.0
YHH3_k127_24716_5 Protein of unknown function (DUF1465) K13592 - - 0.00000000003844 70.0
YHH3_k127_24716_6 Protein of unknown function (DUF3168) - - - 0.00000007626 59.0
YHH3_k127_24716_7 Protein of unknown function (DUF533) - - - 0.0000003057 58.0
YHH3_k127_2483088_0 Type II/IV secretion system protein K02454,K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 432.0
YHH3_k127_2483088_1 Type II secretion system (T2SS), protein F K02455,K02653 - - 0.000005002 50.0
YHH3_k127_2483088_2 PFAM Pentapeptide repeats (8 copies) - - - 0.0001088 53.0
YHH3_k127_2499377_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 485.0
YHH3_k127_2499377_1 methyl-accepting chemotaxis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002048 263.0
YHH3_k127_2499377_2 high-affinity ferrous iron transmembrane transporter activity K07243 - - 0.000000000000000000000000000000000000000000000000000000000000000000007323 242.0
YHH3_k127_2499377_3 Cupredoxin-like domain - - - 0.00000000000000000000000000000001884 129.0
YHH3_k127_2499377_4 invasion associated locus B - - - 0.0000000000000000000000000005043 119.0
YHH3_k127_2566977_0 citrate synthase K01647 - 2.3.3.1 3.03e-212 665.0
YHH3_k127_2566977_1 Phosphoglucomutase/phosphomannomutase, C-terminal domain K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009718 497.0
YHH3_k127_2578473_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1061.0
YHH3_k127_2578473_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006679 549.0
YHH3_k127_2578473_11 hydrolases or acyltransferases (alpha beta hydrolase superfamily) K02170 - 3.1.1.85 0.0000000000001737 79.0
YHH3_k127_2578473_13 Ankyrin repeat - - - 0.0000001794 61.0
YHH3_k127_2578473_14 - - - - 0.000002525 49.0
YHH3_k127_2578473_15 - - - - 0.00008326 45.0
YHH3_k127_2578473_2 Aminotransferase class I and II K00652 - 2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002562 382.0
YHH3_k127_2578473_3 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009258 317.0
YHH3_k127_2578473_4 mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 297.0
YHH3_k127_2578473_5 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000006332 254.0
YHH3_k127_2578473_6 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935,K02169 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.197,6.3.3.3 0.00000000000000000000000000000000000000000000000015 184.0
YHH3_k127_2578473_7 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.000000000000000000000000000449 123.0
YHH3_k127_2578473_8 - - - - 0.0000000000000000000003074 96.0
YHH3_k127_2578473_9 Prepilin-type N-terminal cleavage methylation domain-containing protein - - - 0.0000000000000000004905 96.0
YHH3_k127_2584540_0 Phosphate transporter family K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009097 522.0
YHH3_k127_2584540_1 Semialdehyde dehydrogenase, NAD binding domain K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 421.0
YHH3_k127_2584540_2 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008597 243.0
YHH3_k127_2584540_3 MazG family K02499,K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009267,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.9 0.000000000000000000000000000000000000004341 150.0
YHH3_k127_2584540_4 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.00000000000000000004766 93.0
YHH3_k127_2584540_5 Prokaryotic N-terminal methylation motif - - - 0.00000000000003931 79.0
YHH3_k127_2596302_0 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000000000003494 182.0
YHH3_k127_2596302_1 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000007179 148.0
YHH3_k127_2596302_2 Chemotaxis MotB protein K02557 - - 0.000000000000000000000008383 109.0
YHH3_k127_2596302_3 COG3143 Chemotaxis protein K03414 - - 0.000000000000000000003744 100.0
YHH3_k127_2596302_4 - - - - 0.00000003215 63.0
YHH3_k127_2610795_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005856 572.0
YHH3_k127_2610795_1 Cys/Met metabolism PLP-dependent enzyme K01760 - 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 406.0
YHH3_k127_2610795_2 ABC-type Mn2 Zn2 transport systems, permease components K09816 GO:0000006,GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0010035,GO:0010038,GO:0010043,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0042221,GO:0044464,GO:0046873,GO:0046915,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001032 281.0
YHH3_k127_2610795_3 Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system K02074,K09817 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009217 265.0
YHH3_k127_2644882_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 1.407e-235 748.0
YHH3_k127_2644882_1 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006177 464.0
YHH3_k127_2644882_10 zinc ion binding K10645,K17987 - 2.3.2.27 0.00008453 55.0
YHH3_k127_2644882_11 Modified RING finger domain - - - 0.0003177 52.0
YHH3_k127_2644882_12 Belongs to the malate synthase family K01638 GO:0003674,GO:0003824,GO:0004474,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0008150,GO:0008152,GO:0009514,GO:0009987,GO:0016740,GO:0016746,GO:0019752,GO:0032787,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046487,GO:0046912,GO:0071704 2.3.3.9 0.0007967 51.0
YHH3_k127_2644882_13 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 - 3.1.3.18 0.0008219 51.0
YHH3_k127_2644882_2 DNA polymerase III beta subunit K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006848 451.0
YHH3_k127_2644882_3 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 340.0
YHH3_k127_2644882_4 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007966 336.0
YHH3_k127_2644882_5 bacterioferritin comigratory protein K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000004972 179.0
YHH3_k127_2644882_6 Belongs to the HesB IscA family K15724 - - 0.000000000000000000000000000000001437 132.0
YHH3_k127_2644882_7 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.00000000000000000000000003698 117.0
YHH3_k127_2644882_8 toluene tolerance family protein K07323 - - 0.0000000000000000000000001622 113.0
YHH3_k127_2644882_9 flagellar assembly - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000001008 88.0
YHH3_k127_2679933_0 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002922 308.0
YHH3_k127_2679933_1 Belongs to the 'phage' integrase family K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006864 299.0
YHH3_k127_2679933_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000001449 233.0
YHH3_k127_2679933_3 - - - - 0.0000000000006437 79.0
YHH3_k127_2685258_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 606.0
YHH3_k127_2685258_1 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000006356 204.0
YHH3_k127_2685258_2 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 - 0.0000000000000000000000000001866 116.0
YHH3_k127_2685258_3 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000001176 114.0
YHH3_k127_2685258_4 Septum formation initiator - - - 0.000000000000000007272 87.0
YHH3_k127_2685978_0 Type IV secretory pathway, VirB6 K03201 - - 0.0000000000000000000000000000001363 144.0
YHH3_k127_2688067_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 552.0
YHH3_k127_2688067_1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 338.0
YHH3_k127_2688067_2 ABC transporter, permease protein K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004376 291.0
YHH3_k127_2688067_3 membrane protein, required for colicin V production K03558 - - 0.0000000000000004234 89.0
YHH3_k127_2756223_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.819e-198 627.0
YHH3_k127_2756223_1 Metal-dependent hydrolase K07043 - - 0.00000000000000000000000000000000000000001512 156.0
YHH3_k127_2823976_0 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001427 281.0
YHH3_k127_2823976_1 Phospholipase/Carboxylesterase K06999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009291 257.0
YHH3_k127_2823976_2 Pilus assembly protein K02662,K02663 - - 0.0000000000000000000000000000000000000000000000000000000000002306 238.0
YHH3_k127_2823976_3 - - - - 0.0000000000000009872 80.0
YHH3_k127_2823976_4 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0000000000001353 78.0
YHH3_k127_285126_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 410.0
YHH3_k127_285126_1 Ferrochelatase K01772 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 379.0
YHH3_k127_285126_10 Ankyrin repeat - - - 0.000000000000001346 87.0
YHH3_k127_285126_11 Ankyrin repeats (many copies) - - - 0.00000007749 61.0
YHH3_k127_285126_12 Heat resistant agglutinin 1 protein - - - 0.0002554 50.0
YHH3_k127_285126_2 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 361.0
YHH3_k127_285126_3 - - - - 0.00000000000000000000000000000000000002933 152.0
YHH3_k127_285126_4 repeat-containing protein - - - 0.00000000000000000000008485 109.0
YHH3_k127_285126_5 Ankyrin repeat domain protein - - - 0.0000000000000000000001348 109.0
YHH3_k127_285126_6 spectrin binding - - - 0.0000000000000000003778 100.0
YHH3_k127_285126_7 spectrin binding - - - 0.00000000000000006094 89.0
YHH3_k127_285126_8 Ankyrin repeats (many copies) - - - 0.0000000000000002347 88.0
YHH3_k127_285126_9 Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing - GO:0000003,GO:0000768,GO:0001655,GO:0001667,GO:0002064,GO:0002065,GO:0002066,GO:0003006,GO:0003008,GO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005912,GO:0006928,GO:0006949,GO:0006996,GO:0007010,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0007520,GO:0007610,GO:0007611,GO:0007612,GO:0007632,GO:0008150,GO:0008306,GO:0008307,GO:0008542,GO:0009314,GO:0009416,GO:0009628,GO:0009653,GO:0009888,GO:0009986,GO:0009987,GO:0010631,GO:0010927,GO:0014902,GO:0016043,GO:0016477,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030030,GO:0030036,GO:0030054,GO:0030154,GO:0030239,GO:0030424,GO:0030425,GO:0030707,GO:0030855,GO:0031032,GO:0031674,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0033267,GO:0035295,GO:0036477,GO:0040011,GO:0042692,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043292,GO:0043679,GO:0043954,GO:0044085,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044444,GO:0044449,GO:0044456,GO:0044463,GO:0044464,GO:0044703,GO:0045202,GO:0045214,GO:0048468,GO:0048477,GO:0048513,GO:0048609,GO:0048646,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050808,GO:0050839,GO:0050877,GO:0050890,GO:0050896,GO:0051146,GO:0051179,GO:0051674,GO:0051704,GO:0055001,GO:0055002,GO:0060429,GO:0061061,GO:0061326,GO:0061327,GO:0070161,GO:0070925,GO:0071840,GO:0072001,GO:0072002,GO:0090130,GO:0090132,GO:0097061,GO:0097062,GO:0097435,GO:0097447,GO:0097458,GO:0098793,GO:0099080,GO:0099081,GO:0099173,GO:0099512,GO:0106027,GO:0120025,GO:0120036,GO:0120038,GO:0150034 - 0.0000000000000003728 87.0
YHH3_k127_2855520_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 4.06e-269 846.0
YHH3_k127_2855520_1 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 394.0
YHH3_k127_2855520_2 Phenylalanine-4-hydroxylase K00500 GO:0003674,GO:0003824,GO:0004497,GO:0004505,GO:0008150,GO:0008152,GO:0016491,GO:0016705,GO:0016714,GO:0055114 1.14.16.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 297.0
YHH3_k127_2855520_3 PFAM LemA family protein K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000008506 238.0
YHH3_k127_2855520_4 Protein of unknown function (DUF3137) - - - 0.00000000000000000000000000000000000000000000000000000000205 213.0
YHH3_k127_2855520_5 GIY-YIG catalytic domain K07461 - - 0.0000000000000000000001827 99.0
YHH3_k127_2855520_6 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.00000004568 64.0
YHH3_k127_2855520_7 Protein of unknown function (DUF3137) - - - 0.00009193 55.0
YHH3_k127_2961747_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003871,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0032259,GO:0042084,GO:0042085,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050667,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.14 8.315e-302 943.0
YHH3_k127_2961747_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 446.0
YHH3_k127_2961747_2 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 372.0
YHH3_k127_2961747_3 Dioxygenases related to 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.00000000000000000000000000000000008451 134.0
YHH3_k127_2995437_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The alpha chain is the DNA polymerase (By similarity) K02337 - 2.7.7.7 0.0 1279.0
YHH3_k127_2995437_1 DegT/DnrJ/EryC1/StrS aminotransferase family K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 282.0
YHH3_k127_2995437_2 Domain of Unknown Function (DUF350) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002456 271.0
YHH3_k127_2995437_3 Prepilin-type N-terminal cleavage methylation domain-containing protein - - - 0.00000000000000000000705 102.0
YHH3_k127_2995437_4 general secretion pathway protein K02456,K02458 - - 0.000000000000001552 86.0
YHH3_k127_2995437_5 lipolytic protein G-D-S-L family K00612 - - 0.0000001488 62.0
YHH3_k127_3001673_0 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 346.0
YHH3_k127_3001673_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 312.0
YHH3_k127_3001673_2 Protein of unknown function (DUF1009) K09949 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000000000000000000000000000000000000000000000000000002157 256.0
YHH3_k127_3001673_3 histidine kinase response regulator K13587 - 2.7.13.3 0.0008962 48.0
YHH3_k127_3082263_0 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000001418 246.0
YHH3_k127_3082263_1 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000001479 242.0
YHH3_k127_3082263_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000014 237.0
YHH3_k127_3082263_3 - - - - 0.00000000001212 76.0
YHH3_k127_3086826_0 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 1.964e-258 829.0
YHH3_k127_3086826_1 Peptidase M16 inactive domain K07263,K07623 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 349.0
YHH3_k127_3086826_2 Protein of unknown function (DUF2748) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 344.0
YHH3_k127_3086826_3 Belongs to the GPI family K01810,K13810 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.2.1.2,5.3.1.9 0.0000000000000000000000000000000000003224 150.0
YHH3_k127_3187749_0 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007665 256.0
YHH3_k127_3187749_1 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000008478 238.0
YHH3_k127_3187749_2 Ankyrin repeat - - - 0.00009875 53.0
YHH3_k127_3251943_0 Protein of unknown function (DUF1275) - - - 0.0000000000000000000000000000000000000000000000000000000000002028 220.0
YHH3_k127_3251943_1 SpoIIAA-like - - - 0.000000000000000000000006182 105.0
YHH3_k127_3251943_2 Ribbon-helix-helix protein, copG family - - - 0.000000000000000009543 84.0
YHH3_k127_3251943_3 peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.0000000649 64.0
YHH3_k127_3251943_4 Bacteriophage replication gene A protein (GPA) - - - 0.0000006466 52.0
YHH3_k127_3251943_5 Protein of unknown function (DUF3108) - - - 0.0003182 51.0
YHH3_k127_3263492_0 Glycosyl transferase family 41 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 414.0
YHH3_k127_3263492_1 Ribosomal RNA adenine dimethylases K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 291.0
YHH3_k127_3263492_2 PPIC-type PPIASE domain K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000004968 244.0
YHH3_k127_3303691_0 GTP-binding protein TypA K06207 - - 8.292e-287 891.0
YHH3_k127_3303691_1 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002819 479.0
YHH3_k127_3303691_10 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000001037 85.0
YHH3_k127_3303691_11 - - - - 0.0000001389 53.0
YHH3_k127_3303691_12 Transcriptional regulator K07733 - - 0.0005913 44.0
YHH3_k127_3303691_2 Histidinol dehydrogenase K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 455.0
YHH3_k127_3303691_3 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 429.0
YHH3_k127_3303691_4 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 300.0
YHH3_k127_3303691_5 Histidine kinase-like ATPase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004947 235.0
YHH3_k127_3303691_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000165 204.0
YHH3_k127_3303691_7 transcriptional - - - 0.000000000000000000000000000000000006774 141.0
YHH3_k127_3303691_8 Uncharacterised protein family (UPF0262) - - - 0.00000000000000000000000000000000001982 139.0
YHH3_k127_3303691_9 Domain of unknown function (DUF4154) - - - 0.000000000000000001256 92.0
YHH3_k127_3348894_0 This protein is involved in the repair of mismatches in DNA K03555 - - 3.289e-291 914.0
YHH3_k127_3348894_1 Isocitrate lyase K01637 - 4.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000482 495.0
YHH3_k127_3348894_2 Bacterial regulatory proteins, tetR family K16137 - - 0.0000000000000000000000000000000000005642 146.0
YHH3_k127_3414954_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.8.1.4 3.66e-228 714.0
YHH3_k127_3414954_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000005683 110.0
YHH3_k127_3414954_2 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00008125 51.0
YHH3_k127_3414954_3 - - - - 0.0001022 49.0
YHH3_k127_3428186_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1186.0
YHH3_k127_3428186_1 type IV secretion system protein K03199 - - 0.0 1110.0
YHH3_k127_3428186_10 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000287 157.0
YHH3_k127_3428186_11 to the N-terminal domain of Lon protease K01338,K07157 - 3.4.21.53 0.0000000000000000000000000000000002922 139.0
YHH3_k127_3428186_12 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000007239 124.0
YHH3_k127_3428186_13 Type IV secretory pathway, VirB3 components K03198 - - 0.00000000000000000000000006425 109.0
YHH3_k127_3428186_14 Acetyltransferase (GNAT) domain K03826 - - 0.00000000000000000000000008397 112.0
YHH3_k127_3428186_15 Type IV secretory pathway, VirB6 components K03201 - - 0.0000000002755 75.0
YHH3_k127_3428186_2 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.468e-254 798.0
YHH3_k127_3428186_3 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 3.89e-229 719.0
YHH3_k127_3428186_4 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008115 607.0
YHH3_k127_3428186_5 Pfam:DUF328 K09861 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0033194,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:1901700 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 307.0
YHH3_k127_3428186_6 LexA-binding, inner membrane-associated putative hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002129 277.0
YHH3_k127_3428186_7 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000513 267.0
YHH3_k127_3428186_8 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000008152 201.0
YHH3_k127_3428186_9 OsmC-like protein - - - 0.00000000000000000000000000000000000000006005 158.0
YHH3_k127_3495808_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009285 315.0
YHH3_k127_3495808_1 Belongs to the TrpC family K01609 - 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004954 287.0
YHH3_k127_3495808_2 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000001404 244.0
YHH3_k127_3495808_3 Protein of unknown function, DUF599 - - - 0.000000000000000000000000000000000000000002459 164.0
YHH3_k127_3495808_4 YGGT family K02221 - - 0.0000000000000000007206 89.0
YHH3_k127_3495808_5 DnaJ molecular chaperone homology domain - - - 0.0001326 51.0
YHH3_k127_351175_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 460.0
YHH3_k127_351175_1 DUF1338 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 352.0
YHH3_k127_351175_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000000000000000000000000000000000000000000000000000008022 203.0
YHH3_k127_35385_0 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007667 462.0
YHH3_k127_35385_1 response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000044 259.0
YHH3_k127_35385_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000205 112.0
YHH3_k127_3544488_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1195.0
YHH3_k127_3544488_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 6.477e-210 669.0
YHH3_k127_3544488_10 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007804 251.0
YHH3_k127_3544488_11 PFAM Carbohydrate-selective porin OprB K07267 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008579 261.0
YHH3_k127_3544488_12 Gram-negative porin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000733 249.0
YHH3_k127_3544488_13 protein localization to T-tubule K10380,K15503,K21440 - - 0.000000000000000000000000000000000000000000000000000000001744 212.0
YHH3_k127_3544488_14 AAA ATPase domain - - - 0.0000000000000000000000000000000000000001733 153.0
YHH3_k127_3544488_15 Domain of unknown function (DUF3576) - - - 0.000000000000000000000000000000000000001565 154.0
YHH3_k127_3544488_16 protein secretion by the type IV secretion system K03203 - - 0.0000000000000000000000001575 116.0
YHH3_k127_3544488_17 Protein conserved in bacteria K09774 - - 0.00000000000000000003174 97.0
YHH3_k127_3544488_18 Lipopolysaccharide-assembly K03643 - - 0.00000000000003113 79.0
YHH3_k127_3544488_19 mitochondrial respiratory chain complex II assembly - - - 0.00000003183 56.0
YHH3_k127_3544488_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 396.0
YHH3_k127_3544488_3 Glutamate-cysteine ligase K01919 - 6.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007893 368.0
YHH3_k127_3544488_4 ABC transporter, ATP-binding protein K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006537 366.0
YHH3_k127_3544488_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K13584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 355.0
YHH3_k127_3544488_6 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000003 262.0
YHH3_k127_3544488_7 RNA methyltransferase K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000000008263 261.0
YHH3_k127_3544488_8 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000002714 264.0
YHH3_k127_3544488_9 Type IV secretory pathway, VirB9 components K03204 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004245 257.0
YHH3_k127_3663435_0 PFAM TM1410 hypothetical-related protein K21006 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 505.0
YHH3_k127_3663435_1 chaperone-mediated protein folding K11935 - - 0.000000000000000000000000000000000000000000000000000000000000292 240.0
YHH3_k127_3663435_2 Glycoside-hydrolase family GH114 K21006 - - 0.00000000000000000000000000000000000000001791 157.0
YHH3_k127_3663435_3 chaperone-mediated protein folding K11935 - - 0.00000000000000000000000000006298 130.0
YHH3_k127_3666593_0 Nitronate monooxygenase K02371 - 1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 488.0
YHH3_k127_3666593_1 Dihydrodipicolinate synthetase family K01714 GO:0003674,GO:0003824,GO:0006082,GO:0006090,GO:0008150,GO:0008152,GO:0008840,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044281,GO:0071704 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 373.0
YHH3_k127_3666593_2 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000007877 184.0
YHH3_k127_3666593_3 Belongs to the frataxin family K19054 - 1.16.3.1 0.0000000000000000399 85.0
YHH3_k127_3666593_4 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000006014 66.0
YHH3_k127_3666593_5 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.000006978 48.0
YHH3_k127_3678659_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 1.269e-300 930.0
YHH3_k127_3678659_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 1.356e-197 629.0
YHH3_k127_3678659_2 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 440.0
YHH3_k127_3678659_3 Succinate dehydrogenase, cytochrome b556 subunit K00241 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000001558 130.0
YHH3_k127_3678659_4 ETC complex I subunit conserved region - - - 0.0000000000000000000000001802 108.0
YHH3_k127_3678659_5 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.000000000000000000000001253 109.0
YHH3_k127_3678659_6 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000002234 89.0
YHH3_k127_3678659_7 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000173 66.0
YHH3_k127_3776371_0 COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation K13598 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 420.0
YHH3_k127_3776371_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000004367 214.0
YHH3_k127_3857658_0 Dehydrogenase K15371 GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0008150,GO:0008152,GO:0016491,GO:0016638,GO:0016639,GO:0055114 1.4.1.2 0.0 1439.0
YHH3_k127_3857658_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 2.019e-236 746.0
YHH3_k127_3857658_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 454.0
YHH3_k127_3857658_3 involved in chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008998 351.0
YHH3_k127_3857658_4 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000007427 244.0
YHH3_k127_3857658_5 Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 GO:0000166,GO:0003674,GO:0003824,GO:0003855,GO:0004764,GO:0005488,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25,4.2.1.10 0.00000000000000000000000000000000000000000000000000000000000004975 218.0
YHH3_k127_3857658_6 rRNA small subunit methyltransferase G K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000000000000000000000000000000000005196 182.0
YHH3_k127_3857658_7 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.00000000000000000000001628 113.0
YHH3_k127_386911_0 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 472.0
YHH3_k127_386911_1 Cys/Met metabolism PLP-dependent enzyme K01739,K10764 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005471 472.0
YHH3_k127_386911_10 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 GO:0003674,GO:0005215 - 0.0000000000607 66.0
YHH3_k127_386911_11 Flagellar protein FliS K02422 - - 0.00001182 53.0
YHH3_k127_386911_12 xylan catabolic process K03932 - - 0.00001335 57.0
YHH3_k127_386911_13 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0009656 49.0
YHH3_k127_386911_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 461.0
YHH3_k127_386911_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 439.0
YHH3_k127_386911_4 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003114 430.0
YHH3_k127_386911_5 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000002466 187.0
YHH3_k127_386911_6 COG3232 5-carboxymethyl-2-hydroxymuconate isomerase K01826 - 5.3.3.10 0.0000000000000000003284 91.0
YHH3_k127_386911_7 Pfam:N_methyl_2 - - - 0.00000000000000002605 86.0
YHH3_k127_386911_8 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.00000000001178 78.0
YHH3_k127_386911_9 interleukin-8 biosynthetic process - - - 0.00000000002177 76.0
YHH3_k127_3880753_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 6.873e-242 758.0
YHH3_k127_3880753_1 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005361 440.0
YHH3_k127_3880753_2 COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 395.0
YHH3_k127_3880753_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000000001502 158.0
YHH3_k127_3880753_4 GDP-mannose mannosyl hydrolase activity K03574 - 3.6.1.55 0.0000000000000000000000000001433 120.0
YHH3_k127_3880753_5 implicated in regulation of membrane protease activity - - - 0.000000000000007458 81.0
YHH3_k127_3880753_6 Glycosyl transferases group 1 - - - 0.000000006279 61.0
YHH3_k127_398516_0 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 543.0
YHH3_k127_398516_1 Methyltransferase K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 440.0
YHH3_k127_398516_2 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 394.0
YHH3_k127_398516_3 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K19696 - 2.4.2.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 354.0
YHH3_k127_398516_4 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 285.0
YHH3_k127_4048803_0 COG1960 Acyl-CoA dehydrogenases K00248 - 1.3.8.1 9.74e-233 734.0
YHH3_k127_4048803_1 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005868 605.0
YHH3_k127_4048803_2 Prephenate dehydratase K04518 - 4.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006195 280.0
YHH3_k127_4048803_3 metalloendopeptidase activity K03799,K06013 - 3.4.24.84 0.00000000000000000000001152 113.0
YHH3_k127_4048803_4 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000001394 76.0
YHH3_k127_4111709_0 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes K00164 - 1.2.4.2 0.0 1098.0
YHH3_k127_4111709_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 547.0
YHH3_k127_4111709_2 CoA binding domain K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 496.0
YHH3_k127_4111709_3 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008153 492.0
YHH3_k127_4111709_4 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002314 243.0
YHH3_k127_4133715_0 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006846 374.0
YHH3_k127_4133715_1 Pilus assembly protein K02662,K02663,K12288 GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000000000000000005034 142.0
YHH3_k127_4133715_2 pilus assembly protein PilW K02672 - - 0.0000000000000359 81.0
YHH3_k127_4133715_5 TIGRFAM type IV pilus modification protein PilV K02671 - - 0.0006797 48.0
YHH3_k127_4153512_0 phenylalanyl-tRNA synthetase beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 1.857e-256 812.0
YHH3_k127_4153512_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000004803 124.0
YHH3_k127_4181711_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.144e-243 762.0
YHH3_k127_4181711_1 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 535.0
YHH3_k127_4181711_2 Belongs to the KdsA family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002812 406.0
YHH3_k127_4181711_3 peptidylprolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000001782 261.0
YHH3_k127_4181711_4 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000003005 220.0
YHH3_k127_4181711_5 general secretion pathway protein K02456,K02458 - - 0.00000000000001108 85.0
YHH3_k127_4181711_6 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000006988 67.0
YHH3_k127_4289266_0 Helix-hairpin-helix class 2 (Pol1 family) motifs K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 4.197e-269 856.0
YHH3_k127_4289266_1 Arginyl-tRNA synthetase K01887 - 6.1.1.19 3.858e-229 722.0
YHH3_k127_4289266_2 Putative ATP-dependant zinc protease K05844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 582.0
YHH3_k127_4289266_3 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 364.0
YHH3_k127_4289266_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002209 270.0
YHH3_k127_4289266_5 Esterase PHB depolymerase K03932 - - 0.00000000000000000000000000000000000000001184 163.0
YHH3_k127_4289266_6 Sporulation related domain K01679 - 4.2.1.2 0.00000000000000000000000000008245 128.0
YHH3_k127_4289266_7 COG3637 Opacity protein and related surface antigens - - - 0.00000000000000000000000001957 116.0
YHH3_k127_4289266_8 Belongs to the peptidase S11 family K01286,K07258 - 3.4.16.4 0.000000000000000000002802 98.0
YHH3_k127_4296034_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 553.0
YHH3_k127_4296034_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 436.0
YHH3_k127_4296034_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 431.0
YHH3_k127_4296034_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000001311 214.0
YHH3_k127_4296034_4 Ribosomal protein L17 K02879 - - 0.000000000000000000000000000000000000000000000000000000009574 200.0
YHH3_k127_4302907_0 UDP-N-acetylglucosamine 4,6-dehydratase K15894 - 4.2.1.115 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008625 503.0
YHH3_k127_4302907_1 ABC transporter K06147,K06148 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 425.0
YHH3_k127_4302907_2 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006672 292.0
YHH3_k127_4302907_3 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000174 207.0
YHH3_k127_4308592_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00260,K00261,K00262 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.4.1.2,1.4.1.3,1.4.1.4 3.544e-200 633.0
YHH3_k127_4308592_1 Aminotransferase class-III K00821 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000951 469.0
YHH3_k127_4308592_2 COG0842 ABC-type multidrug transport system, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001681 250.0
YHH3_k127_4308592_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000002078 164.0
YHH3_k127_4308592_4 Patatin-like phospholipase domain-containing protein K14674 GO:0000003,GO:0003674,GO:0003824,GO:0004620,GO:0004623,GO:0004771,GO:0004806,GO:0005575,GO:0005622,GO:0005623,GO:0005811,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006642,GO:0006644,GO:0006793,GO:0006796,GO:0007114,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016042,GO:0016298,GO:0016740,GO:0016746,GO:0016747,GO:0016787,GO:0016788,GO:0019433,GO:0019637,GO:0019954,GO:0032505,GO:0042171,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044424,GO:0044464,GO:0046461,GO:0046464,GO:0046486,GO:0046503,GO:0047499,GO:0051301,GO:0052689,GO:0071617,GO:0071704,GO:1901575 2.3.1.51,3.1.1.13,3.1.1.3,3.1.1.4 0.0006604 49.0
YHH3_k127_4373829_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1065.0
YHH3_k127_4373829_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 - 0.0000000000000000000000000000000001093 135.0
YHH3_k127_4373829_2 Belongs to the ABC transporter superfamily - - - 0.00000003307 55.0
YHH3_k127_4408908_0 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 549.0
YHH3_k127_4408908_1 Fumarylacetoacetate (FAA) hydrolase family K16171 - 3.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 462.0
YHH3_k127_4408908_2 4-hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009254 412.0
YHH3_k127_4408908_3 Glutathione S-transferase, C-terminal domain K01801 - 5.2.1.4 0.0000000000000000000000000000000000000000008037 164.0
YHH3_k127_4408908_4 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000008725 121.0
YHH3_k127_4450228_0 alkaline protease secretion ATP-binding protein K06147,K06148 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008836 494.0
YHH3_k127_4450228_1 Secretion protein K02022,K12542 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 308.0
YHH3_k127_4450228_2 Autotransporter beta-domain - - - 0.00000000000000000000000000000000000000000247 179.0
YHH3_k127_4450228_3 RTX toxins and related Ca2 binding proteins - - - 0.000000000000000000000002683 120.0
YHH3_k127_4450228_4 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000002474 104.0
YHH3_k127_4450228_5 PFAM IS1 transposase - - - 0.00000000000000000001939 97.0
YHH3_k127_4450228_6 Gaf domain K02584,K07713,K11908,K12266,K15836,K21009,K21405 - - 0.000000000000000001033 93.0
YHH3_k127_4530274_0 MiaB-like tRNA modifying enzyme K18707 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035598,GO:0035600,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050497,GO:0071704,GO:0090304,GO:1901360 2.8.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 509.0
YHH3_k127_4530274_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001395 285.0
YHH3_k127_4530274_2 Protein of unknown function - - - 0.00000000000000000000000000000000000000000000000000003299 207.0
YHH3_k127_4530274_3 Staphylococcal nuclease homologue - - - 0.000000000000001894 85.0
YHH3_k127_4552577_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.275e-205 653.0
YHH3_k127_4552577_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 503.0
YHH3_k127_4552577_2 Bacterial-like globin K06886 - - 0.00000000000000001093 85.0
YHH3_k127_463856_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 1.041e-227 717.0
YHH3_k127_463856_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 355.0
YHH3_k127_463856_2 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.0000000000000000000000000000000000003296 145.0
YHH3_k127_463856_3 NADH ubiquinone oxidoreductase subunit NDUFA12 K00356 - 1.6.99.3 0.00000000000000000000000000000000001504 138.0
YHH3_k127_463856_4 protein conserved in bacteria - - - 0.000000000000000000000000003871 114.0
YHH3_k127_463856_5 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) K20978 - - 0.000000000000003879 77.0
YHH3_k127_4780280_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 8.003e-272 847.0
YHH3_k127_4780280_1 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 1.545e-228 718.0
YHH3_k127_4780280_2 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000235 263.0
YHH3_k127_4780280_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000000000001895 223.0
YHH3_k127_4780280_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000009797 211.0
YHH3_k127_4780280_5 Belongs to the UPF0260 family K09160 - - 0.0000000000000000000000000000000000000000000000000002016 190.0
YHH3_k127_4780280_6 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.00000000000000000000000000000000000000000000003599 176.0
YHH3_k127_4780280_7 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000002724 171.0
YHH3_k127_4780280_8 cheY-homologous receiver domain - - - 0.000000000000000001805 92.0
YHH3_k127_4780280_9 cheY-homologous receiver domain - - - 0.0000003437 59.0
YHH3_k127_4847624_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1019.0
YHH3_k127_4847624_1 GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 6.075e-227 706.0
YHH3_k127_4847624_2 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000002132 255.0
YHH3_k127_4847624_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000000001627 228.0
YHH3_k127_4847624_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000501 216.0
YHH3_k127_4847624_5 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.00000000000000000000009232 101.0
YHH3_k127_4847624_6 Involved in the binding of tRNA to the ribosomes K02946 GO:0001072,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0015935,GO:0019219,GO:0019222,GO:0019538,GO:0022626,GO:0022627,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0140110,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2001141 - 0.0000000001903 61.0
YHH3_k127_4847624_7 phosphoserine phosphatase K01079 - 3.1.3.3 0.0000002392 61.0
YHH3_k127_4853776_0 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391 424.0
YHH3_k127_4853776_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004307 392.0
YHH3_k127_4853776_2 COG3121 P pilus assembly protein, chaperone PapD - - - 0.0000000000000000000000000000000000000000000000000000000772 205.0
YHH3_k127_4853776_3 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0001665 45.0
YHH3_k127_4857371_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 8.483e-207 650.0
YHH3_k127_4857371_1 COG1960 Acyl-CoA dehydrogenases K20035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 507.0
YHH3_k127_4857371_2 N-terminal TM domain of oligopeptide transport permease C K13895 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006857,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0035672,GO:0042221,GO:0042493,GO:0042884,GO:0042886,GO:0042891,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000002803 221.0
YHH3_k127_4943133_0 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 286.0
YHH3_k127_4943133_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 284.0
YHH3_k127_4943133_2 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000002291 267.0
YHH3_k127_4943133_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001546 264.0
YHH3_k127_4943133_4 Flavodoxin-like fold - - - 0.000000000000000000000000000000000000000000000000007569 186.0
YHH3_k127_4943133_5 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000001235 140.0
YHH3_k127_4981062_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 1.965e-195 613.0
YHH3_k127_4981062_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 565.0
YHH3_k127_4981062_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000002263 253.0
YHH3_k127_4981062_3 to M. xanthus CarD K07736 - - 0.0000000000000000000000000000000000000000000000000000000000004025 217.0
YHH3_k127_4981062_4 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000000000000000000000000002482 188.0
YHH3_k127_4981062_5 DNA polymerase III chi subunit, HolC K02339 - 2.7.7.7 0.0000000000000000000000000000000000000008973 152.0
YHH3_k127_4981062_6 DNA processing protein K04096 - - 0.000000000000000001925 88.0
YHH3_k127_499072_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005128 438.0
YHH3_k127_499072_1 COG0694 Thioredoxin-like proteins and domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000001385 241.0
YHH3_k127_499072_2 alpha/beta hydrolase fold K03821 - - 0.00000000000000000000000000000000000000000000000000000000000000006532 237.0
YHH3_k127_499072_3 Bacterial-like globin - - - 0.000000000000000000000000000000000000000236 152.0
YHH3_k127_5095179_0 Aldehyde dehydrogenase family K00135,K08324 GO:0001505,GO:0003674,GO:0003824,GO:0004777,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006520,GO:0006525,GO:0006527,GO:0006576,GO:0006595,GO:0006598,GO:0006807,GO:0008150,GO:0008152,GO:0009013,GO:0009056,GO:0009060,GO:0009063,GO:0009064,GO:0009065,GO:0009308,GO:0009310,GO:0009445,GO:0009447,GO:0009448,GO:0009450,GO:0009987,GO:0015980,GO:0016020,GO:0016054,GO:0016491,GO:0016620,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0032787,GO:0034641,GO:0042133,GO:0042135,GO:0042402,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044464,GO:0045333,GO:0046395,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0071944,GO:0072329,GO:0072350,GO:0097164,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.2.1.16,1.2.1.20,1.2.1.24,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007091 530.0
YHH3_k127_5095179_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004428 406.0
YHH3_k127_5095179_2 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004416 249.0
YHH3_k127_5095179_3 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K21563 - - 0.000000000000000000000000000000000000004527 156.0
YHH3_k127_5141910_0 Essential cell division protein that coordinates cell division and chromosome segregation. The N-terminus is involved in assembly of the cell-division machinery. The C-terminus functions as a DNA motor that moves dsDNA in an ATP-dependent manner towards the dif recombination site, which is located within the replication terminus region. Translocation stops specifically at Xer-dif sites, where FtsK interacts with the Xer recombinase, allowing activation of chromosome unlinking by recombination. FtsK orienting polar sequences (KOPS) guide the direction of DNA translocation. FtsK can remove proteins from DNA as it translocates, but translocation stops specifically at XerCD-dif site, thereby preventing removal of XerC and XerD from dif (By similarity) K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 561.0
YHH3_k127_5141910_1 Uncharacterised protein family UPF0102 K07460 - - 0.000000000000000000000003345 106.0
YHH3_k127_5141910_2 - - - - 0.00001036 54.0
YHH3_k127_5183347_0 SAICAR synthetase K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 365.0
YHH3_k127_5183347_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009348 306.0
YHH3_k127_5183347_2 Ami_2 K00788,K01447,K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 2.5.1.3,3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000001667 251.0
YHH3_k127_5183347_3 EamA-like transporter family K15268 - - 0.0000000000000000000000000000000000000000000000000001929 196.0
YHH3_k127_5183347_4 Endonuclease containing a URI domain K07461 - - 0.000000000000000000000000000001178 123.0
YHH3_k127_5183347_5 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000004779 120.0
YHH3_k127_5183347_6 COG1076 DnaJ-domain-containing proteins 1 K05801 - - 0.000000000000000000000003188 111.0
YHH3_k127_5183347_7 Domain of unknown function (DUF1476) - - - 0.00000000000000000001656 96.0
YHH3_k127_5265890_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.265e-253 788.0
YHH3_k127_5265890_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 4.253e-253 788.0
YHH3_k127_5265890_10 Twin-arginine translocation pathway signal protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000482 247.0
YHH3_k127_5265890_11 FAD linked oxidase domain protein K00102 - 1.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000004956 259.0
YHH3_k127_5265890_12 Integral membrane protein TerC family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000001671 231.0
YHH3_k127_5265890_13 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000003647 214.0
YHH3_k127_5265890_14 Dehydroquinase class II K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000004885 199.0
YHH3_k127_5265890_15 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000001192 199.0
YHH3_k127_5265890_16 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000007105 191.0
YHH3_k127_5265890_17 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000000000001867 181.0
YHH3_k127_5265890_18 Uncharacterised protein family (UPF0093) K08973 - - 0.000000000000000000000000000000000000000000000000522 179.0
YHH3_k127_5265890_19 LD-carboxypeptidase K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000000005314 177.0
YHH3_k127_5265890_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 589.0
YHH3_k127_5265890_20 UPF0126 domain - - - 0.00000000000000000000000000000000000000000008265 167.0
YHH3_k127_5265890_21 TPR domain protein - - - 0.0000000000000000000000000000000000000000009467 170.0
YHH3_k127_5265890_22 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000004784 165.0
YHH3_k127_5265890_23 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.0000000000000000000000000000000000001269 148.0
YHH3_k127_5265890_24 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein - - - 0.00000000000000000000000000000000002682 154.0
YHH3_k127_5265890_25 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000006414 125.0
YHH3_k127_5265890_26 Dihydroneopterin aldolase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000000000000007953 121.0
YHH3_k127_5265890_27 Produces ATP from ADP in the presence of a proton gradient across the membrane K02113,K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000005857 104.0
YHH3_k127_5265890_28 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000001223 93.0
YHH3_k127_5265890_29 Small Multidrug Resistance protein K03297 - - 0.0000000000000001013 83.0
YHH3_k127_5265890_3 Isocitrate dehydrogenase K00031,K00052 - 1.1.1.42,1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006118 576.0
YHH3_k127_5265890_30 membrane protein domain - - - 0.000000000000005632 89.0
YHH3_k127_5265890_31 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000009588 72.0
YHH3_k127_5265890_32 DnaJ molecular chaperone homology domain - - - 0.000000000007872 72.0
YHH3_k127_5265890_33 Protein of unknown function (DUF1328) - - - 0.0000000000415 64.0
YHH3_k127_5265890_36 Entericidin EcnA/B family - - - 0.000146 48.0
YHH3_k127_5265890_37 beta-lactamase activity K07126 - - 0.000725 52.0
YHH3_k127_5265890_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004172 325.0
YHH3_k127_5265890_5 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 312.0
YHH3_k127_5265890_6 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 303.0
YHH3_k127_5265890_7 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 306.0
YHH3_k127_5265890_8 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 289.0
YHH3_k127_5265890_9 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001193 273.0
YHH3_k127_5403452_0 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 310.0
YHH3_k127_5403452_1 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006224 290.0
YHH3_k127_5403452_2 glycosyl transferase group 1 - - - 0.0000000000000000002788 90.0
YHH3_k127_5403452_3 protein conserved in bacteria - - - 0.0000000000468 64.0
YHH3_k127_5403452_4 sequence-specific DNA binding - - - 0.00008055 49.0
YHH3_k127_5403452_5 Belongs to the SlyX family K03745 - - 0.0004185 47.0
YHH3_k127_5431008_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1504.0
YHH3_k127_5431008_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000001561 188.0
YHH3_k127_5431008_2 - - - - 0.0000000000000000009552 92.0
YHH3_k127_5431008_3 Nucleotidyltransferase substrate binding protein like - - - 0.000000000000001907 80.0
YHH3_k127_5431008_4 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.00000000000001092 74.0
YHH3_k127_5431008_5 nucleotidyltransferase activity K07076 - - 0.000000005694 61.0
YHH3_k127_5531536_0 MviN-like protein K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005435 466.0
YHH3_k127_5531536_1 Flagellar basal body protein FlaE K02390 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006802 405.0
YHH3_k127_5531536_10 COG0784 FOG CheY-like receiver K03413 - - 0.00000000000000000000002229 103.0
YHH3_k127_5531536_11 Phasin protein - - - 0.000000000000009142 80.0
YHH3_k127_5531536_12 molybdopterin binding domain - - - 0.00000000000001116 76.0
YHH3_k127_5531536_14 Flagellar hook-length control protein FliK - - - 0.000000001961 70.0
YHH3_k127_5531536_15 - - - - 0.0002532 48.0
YHH3_k127_5531536_2 Iron-containing alcohol dehydrogenase K00096 - 1.1.1.261 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 332.0
YHH3_k127_5531536_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009567 312.0
YHH3_k127_5531536_4 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005151 295.0
YHH3_k127_5531536_5 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002355 275.0
YHH3_k127_5531536_6 COG0530 Ca2 Na antiporter K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007208 253.0
YHH3_k127_5531536_7 Peptidase C26 K07010 - - 0.00000000000000000000000000000000000000000000000000000003685 204.0
YHH3_k127_5531536_8 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000001526 143.0
YHH3_k127_5531536_9 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000000000000000000000000000000000002425 147.0
YHH3_k127_5592715_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008978 417.0
YHH3_k127_5592715_1 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K03185 - - 0.0000000000000000000000000000000000005437 141.0
YHH3_k127_5592715_2 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000009062 138.0
YHH3_k127_5592715_3 tetraacyldisaccharide 4'-kinase activity K00912,K09791 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.7.1.130 0.00000000000000001663 83.0
YHH3_k127_5627246_0 Belongs to the UbiD family K03182 - 4.1.1.98 4.252e-272 842.0
YHH3_k127_5627246_1 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 2.101e-231 733.0
YHH3_k127_5627246_2 COG1132 ABC-type multidrug transport system, ATPase and permease components K02021,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003039 269.0
YHH3_k127_5627246_3 FAD-NAD(P)-binding - - - 0.000000000000000002165 99.0
YHH3_k127_5712438_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 2.5e-214 682.0
YHH3_k127_5712438_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003378 323.0
YHH3_k127_5712438_2 VirC1 protein K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000002287 233.0
YHH3_k127_5712438_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.000000000000000000000000000000000000000006191 161.0
YHH3_k127_5712438_4 membrane protein domain - - - 0.000000000000000000000000000001054 128.0
YHH3_k127_5787766_0 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 469.0
YHH3_k127_5787766_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 434.0
YHH3_k127_5787766_2 HlyD family secretion protein K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004348 249.0
YHH3_k127_5800722_0 5-aminolevulinic acid synthase K00643 - 2.3.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005574 536.0
YHH3_k127_5800722_1 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 340.0
YHH3_k127_5800722_2 Cytochrome C and Quinol oxidase polypeptide I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009617 317.0
YHH3_k127_5800722_3 GTP cyclohydrolase K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 289.0
YHH3_k127_5800722_4 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.00000000000000000000000000000000000000000000000000000000000002792 220.0
YHH3_k127_5817282_0 CHASE2 K01768 - 4.6.1.1 6.874e-201 649.0
YHH3_k127_584714_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 2.914e-316 982.0
YHH3_k127_584714_1 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05366 - 2.4.1.129,3.4.16.4 5.017e-263 833.0
YHH3_k127_584714_2 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008732 564.0
YHH3_k127_584714_3 PCRF K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 471.0
YHH3_k127_584714_4 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003846 287.0
YHH3_k127_584714_5 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002537 270.0
YHH3_k127_584714_6 Specifically methylates the guanosine in position 1516 of 16S rRNA K15984 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036308,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.242 0.0000000000000000000000000000000000000000000000000000000000000000000005047 245.0
YHH3_k127_584714_7 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 GO:0000103,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006790,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008252,GO:0008441,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000001092 226.0
YHH3_k127_584714_8 Serine aminopeptidase, S33 - - - 0.00000002436 65.0
YHH3_k127_5894374_0 Glutamine amidotransferase domain K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 8.511e-266 830.0
YHH3_k127_5894374_1 HemY protein N-terminus K02498 - - 0.000000000000000000000000000000000003331 145.0
YHH3_k127_5894374_2 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.0000000000000003571 81.0
YHH3_k127_5894374_3 PAS domain - - - 0.0005322 49.0
YHH3_k127_5902044_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 519.0
YHH3_k127_5902044_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008788 490.0
YHH3_k127_5902044_10 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000004669 75.0
YHH3_k127_5902044_11 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 0.000000003523 57.0
YHH3_k127_5902044_2 Belongs to the FPP GGPP synthase family K02523 GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009108,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0042180,GO:0042181,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901615,GO:1901617,GO:1901661,GO:1901663 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008429 349.0
YHH3_k127_5902044_3 PQQ-like domain K17713 - - 0.00000000000000000000000000000000000000000000000000000000000000004538 240.0
YHH3_k127_5902044_4 Ribosomal protein L13 K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000001711 227.0
YHH3_k127_5902044_5 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000002866 222.0
YHH3_k127_5902044_6 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000001781 185.0
YHH3_k127_5902044_7 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - - - 0.00000000000000000000000000000000004577 147.0
YHH3_k127_5902044_8 Response regulator receiver domain K03413 - - 0.0000000000000000000000000002137 118.0
YHH3_k127_5902044_9 Tetratricopeptide repeat-like domain - - - 0.00000000000000000000243 102.0
YHH3_k127_5943834_0 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase - - - 6.703e-268 846.0
YHH3_k127_5943834_1 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 2.178e-251 788.0
YHH3_k127_5943834_10 Response regulator, receiver K03413 - - 0.0000002308 58.0
YHH3_k127_5943834_11 Tetratricopeptide repeat - - - 0.00004465 55.0
YHH3_k127_5943834_2 AFG1-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009547 376.0
YHH3_k127_5943834_3 Histidine kinase K07716 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006177 346.0
YHH3_k127_5943834_4 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 321.0
YHH3_k127_5943834_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001019 246.0
YHH3_k127_5943834_6 DNA polymerase III subunit delta K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000001594 237.0
YHH3_k127_5943834_7 MafB19-like deaminase K01485,K01487,K11991 - 3.5.4.1,3.5.4.3,3.5.4.33 0.000000000000000000000000000000000000000000000000000001436 194.0
YHH3_k127_5943834_8 ACT domain K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000001 179.0
YHH3_k127_5943834_9 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - - - 0.000000000000000002149 96.0
YHH3_k127_6009277_0 ABC-type uncharacterized transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008774 410.0
YHH3_k127_6009277_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 346.0
YHH3_k127_6009277_2 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 334.0
YHH3_k127_6009277_3 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 311.0
YHH3_k127_6009277_4 Domain of unknown function (DUF4340) - - - 0.00000000000000003952 93.0
YHH3_k127_6009277_5 - - - - 0.000000000003296 73.0
YHH3_k127_6011656_0 Phage major capsid protein E - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007526 456.0
YHH3_k127_6011656_1 - - - - 0.0000000000000000000000000000000000000000000001547 175.0
YHH3_k127_6011656_2 Prophage minor tail protein Z (GPZ) - - - 0.00000000000000000000000000000000000000000000181 170.0
YHH3_k127_6011656_3 Type VI secretion system, phage-baseplate injector - - - 0.00000000000000000000000000000000000000006724 157.0
YHH3_k127_6011656_4 - - - - 0.00000000000000000000000000000000008993 141.0
YHH3_k127_6034857_0 Sulfate permease family K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 413.0
YHH3_k127_6034857_1 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 354.0
YHH3_k127_6034857_10 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 GO:0002790,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000000000000000000000000000000003202 162.0
YHH3_k127_6034857_11 periplasmic or secreted lipoprotein - - - 0.00000000000000000000000000000000000000001357 160.0
YHH3_k127_6034857_12 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000000000000000000000000000000000000002435 159.0
YHH3_k127_6034857_13 import inner membrane translocase, subunit Tim44 - - - 0.0000000000000000000000000000000000001085 150.0
YHH3_k127_6034857_14 protein conserved in bacteria - - - 0.0000000000000000000000000000001487 130.0
YHH3_k127_6034857_15 GIY-YIG catalytic domain - - - 0.0000000000000000000008535 97.0
YHH3_k127_6034857_16 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02236,K02278,K02506,K02654,K10966 - 3.4.23.43 0.000000000000000003485 94.0
YHH3_k127_6034857_17 - - - - 0.000000000000000603 89.0
YHH3_k127_6034857_18 protein ubiquitination K15502,K15503 - - 0.000000000000004669 83.0
YHH3_k127_6034857_19 Ankyrin repeat-containing protein K21440 - - 0.0000000005827 68.0
YHH3_k127_6034857_2 Belongs to the prokaryotic GSH synthase family K01920 GO:0003674,GO:0003824,GO:0004363,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006518,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0019184,GO:0034641,GO:0042398,GO:0043043,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044424,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901564,GO:1901566,GO:1901576 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004321 347.0
YHH3_k127_6034857_20 Ankyrin repeats (many copies) - - - 0.00000001345 64.0
YHH3_k127_6034857_21 Acts as a magnesium transporter K06213 - - 0.00000006922 59.0
YHH3_k127_6034857_3 membrane-bound lytic murein transglycosylase K08304 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008816 342.0
YHH3_k127_6034857_4 Aromatic amino acid lyase K01745 GO:0003674,GO:0003824,GO:0004397,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006548,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009987,GO:0010035,GO:0010038,GO:0010043,GO:0016054,GO:0016829,GO:0016840,GO:0016841,GO:0019439,GO:0019752,GO:0034641,GO:0042221,GO:0042592,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0046483,GO:0046700,GO:0048878,GO:0050801,GO:0050896,GO:0052803,GO:0052805,GO:0055065,GO:0055069,GO:0055076,GO:0055080,GO:0065007,GO:0065008,GO:0071704,GO:0072507,GO:0097501,GO:0098771,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1990359 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 332.0
YHH3_k127_6034857_5 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 306.0
YHH3_k127_6034857_6 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 302.0
YHH3_k127_6034857_7 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 288.0
YHH3_k127_6034857_8 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000001599 253.0
YHH3_k127_6034857_9 Belongs to the mannose-6-phosphate isomerase type 2 family K00971,K16011 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000000000000000000000017 202.0
YHH3_k127_619257_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 520.0
YHH3_k127_619257_1 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007946 402.0
YHH3_k127_619257_10 General glycosylation pathway protein K17249 GO:0003674,GO:0003824,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0070085,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.4.1.292 0.000000000000451 79.0
YHH3_k127_619257_2 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006461 381.0
YHH3_k127_619257_3 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003415 258.0
YHH3_k127_619257_4 MotA/TolQ/ExbB proton channel family K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001249 256.0
YHH3_k127_619257_5 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.0000000000000000000000000000001566 126.0
YHH3_k127_619257_6 CbiX K03794 - 4.99.1.4 0.00000000000000000000000000003213 120.0
YHH3_k127_619257_7 Domain of unknown function (DUF1905) - - - 0.00000000000000000000000001984 111.0
YHH3_k127_619257_8 The M ring may be actively involved in energy transduction K02409 - - 0.0000000000000000000002593 102.0
YHH3_k127_619257_9 Flagellar assembly protein FliH K02411 - - 0.0000000000000000005416 96.0
YHH3_k127_620013_0 Transmembrane secretion effector K05939 - 2.3.1.40,6.2.1.20 1.667e-293 916.0
YHH3_k127_620013_1 Predicted membrane protein (DUF2339) - - - 7.493e-228 734.0
YHH3_k127_620013_2 COG0744 Membrane carboxypeptidase (penicillin-binding protein) K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000701 575.0
YHH3_k127_620013_3 Major facilitator Superfamily K05939 - 2.3.1.40,6.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 455.0
YHH3_k127_620013_4 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000004196 233.0
YHH3_k127_620013_5 WHG domain - - - 0.0000000000000000000000000000000000000000004296 165.0
YHH3_k127_620013_6 PFAM response regulator receiver K03413 - - 0.00000000000000000000000000000000000000001729 155.0
YHH3_k127_6242281_0 Belongs to the ABC transporter superfamily K13896 - - 1.582e-206 657.0
YHH3_k127_6242281_1 Aminotransferase class I and II K14261 GO:0003674,GO:0003824,GO:0004021,GO:0006082,GO:0006090,GO:0006520,GO:0006522,GO:0006523,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009078,GO:0009079,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019272,GO:0019752,GO:0030632,GO:0032787,GO:0042851,GO:0042852,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046144,GO:0046145,GO:0046394,GO:0046416,GO:0046436,GO:0046437,GO:0047635,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005505 593.0
YHH3_k127_6242281_2 Subtilase family K08651,K14645 - 3.4.21.66 0.00000000000000000000000000000000000000000000000000000000000000000006483 262.0
YHH3_k127_6242281_3 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0004808,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0071949,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363 2.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000005673 226.0
YHH3_k127_6242281_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000006506 201.0
YHH3_k127_6242281_5 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000007078 169.0
YHH3_k127_6242281_6 - - - - 0.00000000000000000000000000000000000000004398 161.0
YHH3_k127_6242281_7 Response regulator receiver K03413 - - 0.00000000000000000000000000000005802 128.0
YHH3_k127_6242281_8 Prepilin-type N-terminal cleavage methylation domain-containing protein - - - 0.00000000000000000003278 100.0
YHH3_k127_6242281_9 Ankyrin repeat domain-containing protein 6 K21435 GO:0001654,GO:0001736,GO:0001737,GO:0001738,GO:0001745,GO:0001932,GO:0001934,GO:0002009,GO:0002165,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0007163,GO:0007164,GO:0007275,GO:0007399,GO:0007423,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0008150,GO:0008544,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009893,GO:0009913,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0010648,GO:0016043,GO:0019220,GO:0019222,GO:0022008,GO:0022603,GO:0023051,GO:0023056,GO:0023057,GO:0030030,GO:0030111,GO:0030154,GO:0030177,GO:0030178,GO:0030182,GO:0030855,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032872,GO:0032874,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0035315,GO:0035316,GO:0035317,GO:0042067,GO:0042325,GO:0042327,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043408,GO:0043410,GO:0044424,GO:0044464,GO:0045937,GO:0046328,GO:0046330,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048569,GO:0048583,GO:0048584,GO:0048585,GO:0048592,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048749,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0051171,GO:0051173,GO:0051174,GO:0051239,GO:0051246,GO:0051247,GO:0060255,GO:0060429,GO:0060562,GO:0060828,GO:0065007,GO:0070302,GO:0070304,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090090,GO:0090175,GO:0090596,GO:0120036,GO:1902531,GO:1902533,GO:1905330,GO:2000026,GO:2000027,GO:2000050,GO:2000052,GO:2000095,GO:2000096 - 0.00000000006899 76.0
YHH3_k127_6297868_0 helicase - - - 6.458e-220 694.0
YHH3_k127_6297868_1 spectrin binding - - - 0.00000000000000001871 98.0
YHH3_k127_6297868_2 - - - - 0.0000000006096 66.0
YHH3_k127_6394377_0 Type IV secretion system protein VirD4 K03205 - - 5.569e-259 809.0
YHH3_k127_6394377_1 Belongs to the ClpA ClpB family K03694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 601.0
YHH3_k127_6394377_10 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0050896,GO:0051087 - 0.000003251 53.0
YHH3_k127_6394377_11 TIGRFAM Diguanylate cyclase K18967 - 2.7.7.65 0.0001627 53.0
YHH3_k127_6394377_2 Type II/IV secretion system protein K03196 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 470.0
YHH3_k127_6394377_3 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 432.0
YHH3_k127_6394377_4 Belongs to the ClpA ClpB family K03694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003957 346.0
YHH3_k127_6394377_5 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 298.0
YHH3_k127_6394377_6 Cytidylyltransferase family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000004629 172.0
YHH3_k127_6394377_7 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000000001369 141.0
YHH3_k127_6394377_8 Glycoprotease family K01409,K14742 - 2.3.1.234 0.0000000000000000000000000002416 123.0
YHH3_k127_6394377_9 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide - - - 0.0000002247 53.0
YHH3_k127_6417875_0 TrkA-C domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 533.0
YHH3_k127_6417875_1 Mitochondrial fission ELM1 K07276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 291.0
YHH3_k127_6417875_2 Bacterial type II and III secretion system protein K02280 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004496 267.0
YHH3_k127_6417875_3 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000002627 226.0
YHH3_k127_6417875_4 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000001277 100.0
YHH3_k127_6417875_6 protein conserved in bacteria K09806 - - 0.00000002101 59.0
YHH3_k127_6532075_0 Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 310.0
YHH3_k127_6532075_1 chlorophyll binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006573 286.0
YHH3_k127_6532075_2 Papain-like cysteine protease AvrRpt2 K06992 - - 0.000000000000000000000000000000000000000000000000000274 194.0
YHH3_k127_6532075_3 - - - - 0.000008339 52.0
YHH3_k127_655805_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 414.0
YHH3_k127_655805_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 322.0
YHH3_k127_655805_2 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004507 293.0
YHH3_k127_655805_3 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000000000000001991 171.0
YHH3_k127_655805_4 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000000000002554 172.0
YHH3_k127_655805_5 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000001599 133.0
YHH3_k127_655805_6 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000000000001082 129.0
YHH3_k127_6608235_0 DNA Topoisomerase IV K02621 - - 2.47e-322 1001.0
YHH3_k127_6608235_1 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000001844 203.0
YHH3_k127_6608235_2 Prepilin-type N-terminal cleavage methylation domain-containing protein - - - 0.0000000000001938 73.0
YHH3_k127_6629131_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008784 349.0
YHH3_k127_6629131_1 COG0768 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000006112 244.0
YHH3_k127_6629131_2 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000000000000000000000001141 202.0
YHH3_k127_6629131_3 Bacterial protein of unknown function (DUF922) - - - 0.00000000000000000000002653 107.0
YHH3_k127_6629131_4 - - - - 0.00000000004645 68.0
YHH3_k127_6629131_5 Protein of unknown function (DUF560) - - - 0.000001587 61.0
YHH3_k127_6629131_6 Tetratricopeptide repeat - - - 0.00004502 56.0
YHH3_k127_6629131_7 Pentapeptide repeats (9 copies) - - - 0.000444 52.0
YHH3_k127_6640390_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 431.0
YHH3_k127_6640390_1 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 403.0
YHH3_k127_6640390_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000005483 155.0
YHH3_k127_668213_0 Alpha beta hydrolase K03821 - - 5.588e-227 717.0
YHH3_k127_668213_1 Phosphate acetyl/butaryl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004645 609.0
YHH3_k127_668213_2 Deoxyhypusine synthase K00809 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008612,GO:0009058,GO:0009987,GO:0010467,GO:0016740,GO:0016765,GO:0018193,GO:0018205,GO:0019538,GO:0034038,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 570.0
YHH3_k127_668213_3 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K01581 - 4.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 494.0
YHH3_k127_668213_4 Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide K01479,K01480 - 3.5.3.11,3.5.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007538 437.0
YHH3_k127_668213_5 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 378.0
YHH3_k127_668213_6 SpoIIAA-like - - - 0.00000000000000000000000000000000000008374 145.0
YHH3_k127_668213_7 Histidine kinase-like ATPase domain - - - 0.0000000000000000000000000000000000006186 145.0
YHH3_k127_668213_8 - - - - 0.000000000000000000000000001106 121.0
YHH3_k127_6742003_0 PFAM SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004135 242.0
YHH3_k127_6742003_1 type IV secretion system protein K03199 - - 0.00000000000000000000000000000000000000000000000006766 186.0
YHH3_k127_6742003_2 protein conserved in bacteria K09922 - - 0.0000000000003607 70.0
YHH3_k127_6780094_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 1.858e-224 709.0
YHH3_k127_6780094_1 signal peptide peptidase SppA, 36K type K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003829 256.0
YHH3_k127_6780094_2 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000002951 214.0
YHH3_k127_6780094_3 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.000000000000000000000000005329 112.0
YHH3_k127_6780094_4 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000327 88.0
YHH3_k127_6780094_5 PFAM AsmA family K07289 - - 0.000000000000005688 83.0
YHH3_k127_6780094_6 TraX protein - - - 0.000007906 56.0
YHH3_k127_6789478_0 Function of homologous gene experimentally demonstrated in an other organism K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004386 599.0
YHH3_k127_6789478_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 349.0
YHH3_k127_6789478_2 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001025 280.0
YHH3_k127_6789478_3 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 GO:0006935,GO:0008150,GO:0009605,GO:0040011,GO:0042221,GO:0042330,GO:0044403,GO:0044419,GO:0050896,GO:0051701,GO:0051704,GO:0052116,GO:0052126,GO:0052127,GO:0052143,GO:0052192,GO:0052195,GO:0052216,GO:0052243 3.5.1.44 0.00000000000000000000000000000000000000000000000002861 186.0
YHH3_k127_6789478_4 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000000000001382 179.0
YHH3_k127_6841046_0 Belongs to the TPP enzyme family K04103 - 4.1.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 449.0
YHH3_k127_6841046_1 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 357.0
YHH3_k127_6841046_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000000000003257 202.0
YHH3_k127_6841046_3 peptide methionine sulfoxide reductase K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000001408 190.0
YHH3_k127_6841046_4 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000002525 152.0
YHH3_k127_6862136_0 3-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 406.0
YHH3_k127_6862136_1 ABC-type multidrug transport system, ATPase and permease K06147,K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 347.0
YHH3_k127_6862136_2 protein conserved in bacteria K09778 - - 0.000000000000000000000000000000000000000000000000000000001741 209.0
YHH3_k127_6882052_0 NADH dehydrogenase NADH ubiquinone oxidoreductase 75 kD subunit (chain G) K00336 - 1.6.5.3 1.361e-294 917.0
YHH3_k127_6882052_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 456.0
YHH3_k127_6882052_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000001643 85.0
YHH3_k127_6915893_0 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006049 429.0
YHH3_k127_6915893_1 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 354.0
YHH3_k127_6915893_2 Zn-dependent protease, contains TPR repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 350.0
YHH3_k127_6915893_3 - K20326 - - 0.0000000006217 67.0
YHH3_k127_6920551_0 Malic enzyme K00029 - 1.1.1.40 0.0 1114.0
YHH3_k127_6920551_1 Propionyl-CoA carboxylase alpha K01965 - 6.4.1.3 3.619e-274 857.0
YHH3_k127_6920551_10 DUF167 K09131 - - 0.0000000000000005708 81.0
YHH3_k127_6920551_11 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.0000000000004056 73.0
YHH3_k127_6920551_12 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0006014 51.0
YHH3_k127_6920551_2 propionyl-CoA carboxylase beta K01966 - 2.1.3.15,6.4.1.3 3.745e-263 817.0
YHH3_k127_6920551_3 Protein export membrane protein K03072 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 516.0
YHH3_k127_6920551_4 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007729 268.0
YHH3_k127_6920551_5 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.000000000000000000000000000000000000000000000000000000000000000566 234.0
YHH3_k127_6920551_6 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000000000000000000000000000000177 164.0
YHH3_k127_6920551_7 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000000000005512 117.0
YHH3_k127_6920551_8 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.000000000000000000000001276 107.0
YHH3_k127_6920551_9 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000001406 93.0
YHH3_k127_6995189_0 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007772 606.0
YHH3_k127_6995189_1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092,K18649 - 3.1.3.15,3.1.3.25,3.1.3.93 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002364 281.0
YHH3_k127_6995189_2 Phytoene squalene synthetase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000000000009115 179.0
YHH3_k127_6995189_3 This protein is involved in the repair of mismatches in DNA K03555 - - 0.00000000000000000001114 93.0
YHH3_k127_6995189_4 PAS domain - - - 0.0000000000000000004899 93.0
YHH3_k127_6995189_5 PAS domain - - - 0.000000000000004264 82.0
YHH3_k127_7039400_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1371.0
YHH3_k127_7039400_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1003.0
YHH3_k127_7039400_10 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 335.0
YHH3_k127_7039400_11 Ribonuclease, BN K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001301 252.0
YHH3_k127_7039400_12 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000002026 243.0
YHH3_k127_7039400_13 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 GO:0002376,GO:0003674,GO:0003824,GO:0004587,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006536,GO:0006560,GO:0006561,GO:0006591,GO:0006593,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0006970,GO:0006972,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008270,GO:0008483,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009084,GO:0009605,GO:0009607,GO:0009617,GO:0009626,GO:0009628,GO:0009651,GO:0009814,GO:0009816,GO:0009987,GO:0012501,GO:0016053,GO:0016054,GO:0016740,GO:0016769,GO:0018130,GO:0019544,GO:0019752,GO:0019842,GO:0030170,GO:0031974,GO:0033554,GO:0034050,GO:0036094,GO:0042538,GO:0042742,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045087,GO:0046394,GO:0046395,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0050662,GO:0050896,GO:0051179,GO:0051640,GO:0051641,GO:0051646,GO:0051704,GO:0051707,GO:0051716,GO:0070013,GO:0070279,GO:0071704,GO:0097159,GO:0098542,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.6.1.13 0.0000000000000000000000000000000000000000000000000000000000000000001564 247.0
YHH3_k127_7039400_14 COG0438 Glycosyltransferase - - - 0.0000000000000000000000000000000000000000000000000966 191.0
YHH3_k127_7039400_15 Domain of unknown function (DUF4040) K05566 - - 0.0000000000000000000000000000000000000000003671 165.0
YHH3_k127_7039400_16 Na H antiporter, MnhB - - - 0.000000000000000000000000000000000000000003263 158.0
YHH3_k127_7039400_17 COG0784 FOG CheY-like receiver K11443 - - 0.00000000000000000000000000000000000000003909 155.0
YHH3_k127_7039400_18 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K05567 - - 0.000000000000000000000000000000000000005109 149.0
YHH3_k127_7039400_19 Ion channel - - - 0.00000000000000000000000000000000000003667 147.0
YHH3_k127_7039400_2 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 2.369e-304 941.0
YHH3_k127_7039400_20 Belongs to the ArsC family K00537 - 1.20.4.1 0.00000000000000000000000000000001198 129.0
YHH3_k127_7039400_21 polyribonucleotide nucleotidyltransferase - - - 0.000000000000000000000000003972 118.0
YHH3_k127_7039400_22 Polyribonucleotide nucleotidyltransferase - - - 0.0000000000000000000000005166 108.0
YHH3_k127_7039400_23 Na+/H+ antiporter subunit K05571 - - 0.0000000000000000000001036 101.0
YHH3_k127_7039400_24 Multiple resistance and pH regulation protein F (MrpF / PhaF) K05570 - - 0.00000000000000000001603 93.0
YHH3_k127_7039400_25 Prepilin-type N-terminal cleavage methylation domain-containing protein - - - 0.00000000000000000003923 98.0
YHH3_k127_7039400_26 COG1863 Multisubunit Na H antiporter MnhE subunit K05569 - - 0.00000000000000000006315 95.0
YHH3_k127_7039400_27 Polyribonucleotide nucleotidyltransferase - - - 0.0000000000000000009543 91.0
YHH3_k127_7039400_28 PAS domain - - - 0.000000000000000007317 92.0
YHH3_k127_7039400_29 - - - - 0.000000000000001569 78.0
YHH3_k127_7039400_3 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 1.311e-245 767.0
YHH3_k127_7039400_31 PAS domain - - - 0.0000000006789 68.0
YHH3_k127_7039400_32 Protein conserved in bacteria - - - 0.0000005274 57.0
YHH3_k127_7039400_4 formate hydrogenlyase subunit 3 multisubunit Na H antiporter, MnhD subunit K05568,K12137 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 602.0
YHH3_k127_7039400_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007081 565.0
YHH3_k127_7039400_6 Proton-conducting membrane transporter K05568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 548.0
YHH3_k127_7039400_7 Proton-conducting membrane transporter K05568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007443 509.0
YHH3_k127_7039400_8 response regulator containing a CheY-like receiver domain and a GGDEF domain K02488 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 501.0
YHH3_k127_7039400_9 Glycerol-3-phosphate dehydrogenase K00057 GO:0003674,GO:0003824,GO:0006072,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0047952,GO:0052646,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 339.0
YHH3_k127_7049342_0 Involved in the TonB-independent uptake of proteins K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003888 558.0
YHH3_k127_7049342_1 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002918 270.0
YHH3_k127_7049342_2 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000018 199.0
YHH3_k127_7049342_3 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000000004939 160.0
YHH3_k127_7078130_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 2.938e-223 715.0
YHH3_k127_7078130_1 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008275 372.0
YHH3_k127_7078130_2 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007068 368.0
YHH3_k127_7078130_3 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005601 328.0
YHH3_k127_7078130_4 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000001266 201.0
YHH3_k127_7078130_5 Flagellar biosynthetic protein FliR K02421 - - 0.0000000000000000000000000000000000000000000000000005283 192.0
YHH3_k127_7078130_6 Ferredoxin K04755 - - 0.0000000000000000000000000000000000000000000005755 168.0
YHH3_k127_7078130_7 COG2825 Outer membrane protein - - - 0.00000000000000000000000001681 115.0
YHH3_k127_7140542_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005494 503.0
YHH3_k127_7140542_1 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 297.0
YHH3_k127_7140542_2 domain protein - - - 0.0000000000000002428 95.0
YHH3_k127_7140542_3 Prokaryotic N-terminal methylation motif - - - 0.00000000000003415 88.0
YHH3_k127_7140542_4 Glycosyl transferases group 1 - - - 0.000000000296 75.0
YHH3_k127_7200841_0 STAS domain K03321 - - 5.342e-214 677.0
YHH3_k127_7200841_1 flagellum-specific ATP synthase K02412 - 3.6.3.14 3.108e-195 619.0
YHH3_k127_7200841_10 Bacterial export proteins, family 3 K02420 - - 0.000000000000000000000001158 106.0
YHH3_k127_7200841_11 Uncharacterized protein conserved in bacteria (DUF2066) - - - 0.000000000000000000000001735 117.0
YHH3_k127_7200841_12 toluene tolerance family protein K07323 - - 0.000000000000000000001162 102.0
YHH3_k127_7200841_13 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.0000000000000003498 84.0
YHH3_k127_7200841_14 Flagellar hook-basal body complex protein FliE K02408 - - 0.000000007153 61.0
YHH3_k127_7200841_15 - - - - 0.00000003838 61.0
YHH3_k127_7200841_16 Phospholipase K07001 - - 0.0004057 51.0
YHH3_k127_7200841_2 Polysaccharide biosynthesis protein K13013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 567.0
YHH3_k127_7200841_3 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 466.0
YHH3_k127_7200841_4 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007108 414.0
YHH3_k127_7200841_5 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007257 349.0
YHH3_k127_7200841_6 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000001987 230.0
YHH3_k127_7200841_7 PAP2 superfamily K12978 - - 0.0000000000000000000000000000000000000000000001092 176.0
YHH3_k127_7200841_8 COG0593 ATPase involved in DNA replication initiation - - - 0.00000000000000000000000000000000000000004546 159.0
YHH3_k127_7200841_9 Flagellar basal body rod FlgEFG protein C-terminal K02388 GO:0005575,GO:0005623,GO:0009288,GO:0009425,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464 - 0.0000000000000000000000000000000000000004699 154.0
YHH3_k127_7210732_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000002902 230.0
YHH3_k127_7210732_1 Polyhydroxyalkanoate synthesis repressor - - - 0.00000000000000000000000000000000000000000004564 165.0
YHH3_k127_7210732_2 ankyrin repeats - - - 0.000000000000000003878 89.0
YHH3_k127_7249487_0 Transporter associated domain K03699 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 435.0
YHH3_k127_7249487_1 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003671 253.0
YHH3_k127_7249487_2 Binds the 23S rRNA K02909 - - 0.0000000000000000000000001493 108.0
YHH3_k127_7249487_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000000001793 67.0
YHH3_k127_7295170_0 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009399 276.0
YHH3_k127_7295170_1 rpsU-divergently transcribed protein K18587 - - 0.000000000000000000000000000000000000000000000001996 181.0
YHH3_k127_7295170_2 invasion associated locus B - - - 0.00000000000000000000000001546 115.0
YHH3_k127_7295170_3 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000001575 83.0
YHH3_k127_7295170_4 ribosomal protein S21 K02970 - - 0.0000000000002033 72.0
YHH3_k127_7295170_5 OmpA family - - - 0.000000001932 63.0
YHH3_k127_7298148_0 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000000000000002224 218.0
YHH3_k127_7298148_1 NACHT domain - - - 0.000000000000000000000000000000000000000000000000000003175 203.0
YHH3_k127_7298148_2 TIGRFAM lipopolysaccharide heptosyltransferase I K02841 - - 0.0000000000000000000000000000000000009626 143.0
YHH3_k127_7311361_0 MreB/Mbl protein K04044 - - 1.195e-230 729.0
YHH3_k127_7311361_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 1.568e-199 627.0
YHH3_k127_7311361_10 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.00000419 49.0
YHH3_k127_7311361_2 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 385.0
YHH3_k127_7311361_3 Cytochrome C1 family K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 326.0
YHH3_k127_7311361_4 COG1104 Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006605 329.0
YHH3_k127_7311361_5 hydrolase of the alpha beta superfamily K07018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 314.0
YHH3_k127_7311361_6 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.000000000000000000000000000000000000000000000000000000000000002016 218.0
YHH3_k127_7311361_7 transcriptional regulator K13643 - - 0.00000000000000000000000000000000000000000000001606 174.0
YHH3_k127_7311361_8 Iron-sulphur cluster biosynthesis K13628 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0009058,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0018130,GO:0019438,GO:0019538,GO:0022607,GO:0031163,GO:0031974,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051540,GO:0051604,GO:0070013,GO:0071704,GO:0071840,GO:0097428,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000001144 161.0
YHH3_k127_7311361_9 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.0000000000000000000000000000000000001427 148.0
YHH3_k127_7425899_0 chemotaxis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008233 576.0
YHH3_k127_7425899_1 poly(A) polymerase K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 339.0
YHH3_k127_7425899_2 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 331.0
YHH3_k127_7425899_3 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000002219 163.0
YHH3_k127_7425899_4 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000001019 100.0
YHH3_k127_7454793_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 462.0
YHH3_k127_7454793_1 Molecular chaperone. Has ATPase activity K04079 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 377.0
YHH3_k127_7454793_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000319 289.0
YHH3_k127_7454793_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002769 286.0
YHH3_k127_7470477_0 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 452.0
YHH3_k127_7470477_1 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004718 414.0
YHH3_k127_7470477_2 DNA recombination protein RmuC homolog K09760 - - 0.000000000000000000000000003043 115.0
YHH3_k127_7470477_3 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000002681 87.0
YHH3_k127_7470477_4 zinc-ribbon domain - - - 0.000000000000007206 83.0
YHH3_k127_7554375_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 5.564e-296 917.0
YHH3_k127_7554375_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 8.581e-296 923.0
YHH3_k127_7554375_2 Terminase RNaseH-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004471 522.0
YHH3_k127_7554375_3 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 310.0
YHH3_k127_7554375_4 COG2518 Protein-L-isoaspartate carboxylmethyltransferase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000436 179.0
YHH3_k127_7554375_5 spectrin binding K15502,K15503 - - 0.0000000000000000000001902 113.0
YHH3_k127_7554375_6 protein conserved in bacteria K09991 - - 0.0000000000001439 80.0
YHH3_k127_7636934_0 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.000000000000000000000000000000000000000000000000000000135 205.0
YHH3_k127_7636934_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000006056 192.0
YHH3_k127_7636934_2 Histidine phosphotransferase C-terminal domain K13588 - - 0.000000000000000000000000005583 115.0
YHH3_k127_7659895_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 495.0
YHH3_k127_7659895_1 MotA/TolQ/ExbB proton channel family K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 314.0
YHH3_k127_7659895_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004046 301.0
YHH3_k127_7659895_3 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - GO:0003674,GO:0003700,GO:0004857,GO:0006355,GO:0008073,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010967,GO:0019219,GO:0019222,GO:0030234,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0033238,GO:0042979,GO:0043086,GO:0044092,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0065009,GO:0080090,GO:0098772,GO:0140110,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000001283 173.0
YHH3_k127_7659895_4 Flavin reductase like domain - - - 0.00000000000000000000000000000000000516 142.0
YHH3_k127_7659895_5 Prepilin-type N-terminal cleavage methylation domain-containing protein - - - 0.000000000000000000000000000000005707 138.0
YHH3_k127_7659895_6 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000001652 102.0
YHH3_k127_7659895_7 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.0000000000000001143 79.0
YHH3_k127_7659895_8 PFAM chemotaxis sensory transducer K03406 - - 0.0006514 50.0
YHH3_k127_770189_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 1.309e-223 703.0
YHH3_k127_770189_1 Rod shape-determining protein (MreB) K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 551.0
YHH3_k127_770189_10 Histidine kinase K07638 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 366.0
YHH3_k127_770189_11 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 346.0
YHH3_k127_770189_12 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006994 340.0
YHH3_k127_770189_13 Quinone oxidoreductase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 341.0
YHH3_k127_770189_14 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 337.0
YHH3_k127_770189_15 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00019 - 1.1.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005578 326.0
YHH3_k127_770189_16 Cell division protein FtsI penicillin-binding protein 2 K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 322.0
YHH3_k127_770189_17 protein conserved in bacteria K00243 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 306.0
YHH3_k127_770189_18 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003645 302.0
YHH3_k127_770189_19 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 287.0
YHH3_k127_770189_2 COG1138 Cytochrome c biogenesis factor K02198 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 559.0
YHH3_k127_770189_20 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07659 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001416 248.0
YHH3_k127_770189_21 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000007557 182.0
YHH3_k127_770189_22 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 GO:0003674,GO:0003824,GO:0008150,GO:0009987,GO:0016043,GO:0017004,GO:0022607,GO:0034622,GO:0043933,GO:0044085,GO:0065003,GO:0071840 - 0.0000000000000000000000000000000000000002771 154.0
YHH3_k127_770189_23 Thiol disulfide interchange protein K02199 - - 0.000000000000000000000000000000000000003318 151.0
YHH3_k127_770189_24 EamA-like transporter family - - - 0.000000000000000000000000000000000000005731 158.0
YHH3_k127_770189_25 general secretion pathway protein K02247,K02679,K12285 - - 0.00000000000000000000000000000000001183 144.0
YHH3_k127_770189_26 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.000000000000000000000000000000001193 134.0
YHH3_k127_770189_27 subunit of a heme lyase K02200 - - 0.00000000000000000000000000005242 120.0
YHH3_k127_770189_28 Siderophore biosynthesis protein domain K00663 - 2.3.1.82 0.000000000000000000000001531 109.0
YHH3_k127_770189_29 PFAM Pentapeptide repeats (8 copies) - - - 0.00000000000000000000007147 114.0
YHH3_k127_770189_3 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004739 515.0
YHH3_k127_770189_30 Ankyrin repeat domain-containing protein 55 - - - 0.0000000000000000644 88.0
YHH3_k127_770189_31 shape-determining protein K03571 - - 0.00000000000001112 80.0
YHH3_k127_770189_32 COG0784 FOG CheY-like receiver K03413 - - 0.000000001596 60.0
YHH3_k127_770189_4 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008816 487.0
YHH3_k127_770189_5 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008381 466.0
YHH3_k127_770189_6 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 467.0
YHH3_k127_770189_7 PFAM HI0933 family protein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 459.0
YHH3_k127_770189_8 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009507 408.0
YHH3_k127_770189_9 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 390.0
YHH3_k127_7739514_0 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 286.0
YHH3_k127_7739514_1 ATP hydrolysis coupled proton transport K02128,K03880 GO:0000276,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005753,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006839,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009628,GO:0009651,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016310,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0019866,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0033177,GO:0033554,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042776,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046907,GO:0046933,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0055085,GO:0055086,GO:0071214,GO:0071470,GO:0071472,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0099131,GO:0099132,GO:0104004,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600,GO:1990542 1.6.5.3 0.000000000000000000000008626 102.0
YHH3_k127_7739514_2 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000001684 106.0
YHH3_k127_7739514_3 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.000000006388 61.0
YHH3_k127_7743365_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 1.761e-239 759.0
YHH3_k127_7743365_1 Mg2 transporter protein, CorA family protein K16074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 419.0
YHH3_k127_7743365_2 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029,K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000466 289.0
YHH3_k127_7743365_3 type IV secretory pathway, VirB10 components K03195 - - 0.0000000000000000000000000000000000000000000000000000000000000003191 237.0
YHH3_k127_7743365_4 Type IV secretion system protein VirB9 K03204 - - 0.00000000000000000000000000000000000000000000000000000000000001293 223.0
YHH3_k127_7743365_5 type IV secretion K03203 - - 0.000000000000000000000000000000000000000000000007883 179.0
YHH3_k127_7743365_6 D-ala-D-ala dipeptidase K08641 - 3.4.13.22 0.0000000000000000000000000000000000000000000001158 170.0
YHH3_k127_7751726_0 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006704 330.0
YHH3_k127_7751726_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000005052 234.0
YHH3_k127_7751726_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000005266 183.0
YHH3_k127_7751726_3 Protein of unknown function (DUF3987) - - - 0.00000000000000000000000000000001531 134.0
YHH3_k127_7751726_4 Histidine kinase - - - 0.00000000000000000000000000000004563 130.0
YHH3_k127_7751726_5 Belongs to the ompA family K03286 - - 0.00000000000000004332 89.0
YHH3_k127_7751726_6 ribosome binding - - - 0.000000000008587 68.0
YHH3_k127_7751726_8 Phage integrase family - - - 0.0000003356 53.0
YHH3_k127_7794410_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.925e-310 959.0
YHH3_k127_7794410_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K01810,K13810 - 2.2.1.2,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000741 208.0
YHH3_k127_7883023_0 DHH family K07462 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 3.969e-195 625.0
YHH3_k127_7883023_1 COG1494 Fructose-1,6-bisphosphatase sedoheptulose 1,7-bisphosphatase and related proteins K11532 - 3.1.3.11,3.1.3.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 471.0
YHH3_k127_7883023_10 Prokaryotic N-terminal methylation motif - - - 0.000000005663 66.0
YHH3_k127_7883023_11 molybdenum cofactor K03750 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006464,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0018315,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0032324,GO:0034641,GO:0036211,GO:0042040,GO:0042278,GO:0042802,GO:0043170,GO:0043412,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061598,GO:0061599,GO:0070566,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.10.1.1 0.0000003872 55.0
YHH3_k127_7883023_2 homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 475.0
YHH3_k127_7883023_3 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 358.0
YHH3_k127_7883023_4 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001601 284.0
YHH3_k127_7883023_5 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003445 281.0
YHH3_k127_7883023_6 MlaA lipoprotein K04754 - - 0.00000000000000000000000000000000000000000000000000000000001456 214.0
YHH3_k127_7883023_7 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000000000001953 169.0
YHH3_k127_7883023_8 toluene tolerance family protein K07323 - - 0.00000000000000000000000000001056 126.0
YHH3_k127_7883023_9 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000728 101.0
YHH3_k127_788868_0 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 397.0
YHH3_k127_788868_1 Flagella basal body rod protein K02392 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 311.0
YHH3_k127_788868_2 Flagellar L-ring protein K02393 - - 0.000000000000000000000000000000000000000000000000000000000000000000001611 243.0
YHH3_k127_788868_3 Flagellar basal body-associated protein FliL K02415 - - 0.000000000000000000000000000000000001321 146.0
YHH3_k127_788868_4 Flagellar basal body rod FlgEFG protein C-terminal K02391,K02392 - - 0.0000000000000000000000000000000006081 140.0
YHH3_k127_788868_5 PFAM MgtE intracellular - - - 0.00000000000000000003633 98.0
YHH3_k127_788868_6 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.000000000000001395 86.0
YHH3_k127_788868_7 Protein of unknown function (DUF2671) - - - 0.0000000001129 65.0
YHH3_k127_788868_8 - - - - 0.000008079 55.0
YHH3_k127_7937182_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 1.491e-214 674.0
YHH3_k127_7937182_1 methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000004824 190.0
YHH3_k127_8024840_0 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008877 333.0
YHH3_k127_8024840_1 - - - - 0.000000000000000000000000000000000000000000881 158.0
YHH3_k127_8024840_2 Uncharacterized protein family UPF0016 - - - 0.00000000000000000000000004619 113.0
YHH3_k127_8024840_3 - - - - 0.00000001617 55.0
YHH3_k127_8074787_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 608.0
YHH3_k127_8074787_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009104 477.0
YHH3_k127_8074787_10 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000000000000000001764 125.0
YHH3_k127_8074787_11 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000008485 104.0
YHH3_k127_8074787_12 PFAM Pentapeptide repeats (8 copies) - - - 0.000000000000000000001585 108.0
YHH3_k127_8074787_13 PAS domain - - - 0.00000000000009115 76.0
YHH3_k127_8074787_14 Protein of unknown function (DUF721) - - - 0.00000000001292 71.0
YHH3_k127_8074787_2 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 381.0
YHH3_k127_8074787_3 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 338.0
YHH3_k127_8074787_4 Carbon-nitrogen hydrolase K11206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 299.0
YHH3_k127_8074787_5 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 293.0
YHH3_k127_8074787_6 Double sensory domain of two-component sensor kinase K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000002351 251.0
YHH3_k127_8074787_7 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000002842 241.0
YHH3_k127_8074787_8 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.00000000000000000000000000000000000000000000000000000000001024 210.0
YHH3_k127_8074787_9 protein conserved in bacteria K09798 - - 0.000000000000000000000000000000000003084 152.0
YHH3_k127_8075070_0 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 411.0
YHH3_k127_8075070_1 PFAM Type II IV secretion system protein K02670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 334.0
YHH3_k127_8075070_2 ABC transporter K01990,K19340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001234 272.0
YHH3_k127_8075070_3 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000004182 235.0
YHH3_k127_8075070_4 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000000006131 199.0
YHH3_k127_8075070_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000001523 178.0
YHH3_k127_8082873_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1134.0
YHH3_k127_8082873_1 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000003317 195.0
YHH3_k127_8082873_2 Prepilin-type N-terminal cleavage methylation domain-containing protein - - - 0.00000000000000000001412 98.0
YHH3_k127_8082873_3 Zinc-finger domain - - - 0.000000000000005897 76.0
YHH3_k127_8085567_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 566.0
YHH3_k127_8085567_1 Sodium hydrogen exchanger K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009445 342.0
YHH3_k127_8085567_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00023,K00059 - 1.1.1.100,1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003524 302.0
YHH3_k127_8085567_3 PFAM CMP dCMP deaminase zinc-binding - - - 0.000000000000000000000000000000000000000000000000000000000000001238 221.0
YHH3_k127_8085567_4 COG1405 Transcription initiation factor TFIIIB, Brf1 subunit Transcription initiation factor TFIIB - - - 0.00000000000000000000000000002817 120.0
YHH3_k127_8085567_5 PAS domain - - - 0.0000000000001823 77.0
YHH3_k127_8157908_0 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 374.0
YHH3_k127_8157908_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003496 276.0
YHH3_k127_8157908_2 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000446 258.0
YHH3_k127_8157908_3 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000002335 253.0
YHH3_k127_8157908_4 Ankyrin repeat K15502,K15503,K15504 GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006810,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016050,GO:0016192,GO:0022607,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046907,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0061024,GO:0065003,GO:0070013,GO:0071840,GO:0090114 - 0.00000000000000000000000000000000001412 147.0
YHH3_k127_8171953_0 FAD dependent oxidoreductase K07137 - - 2.876e-273 848.0
YHH3_k127_8171953_1 ABC transporter K06147,K11004 - - 2.838e-200 630.0
YHH3_k127_8171953_10 4 iron, 4 sulfur cluster binding - - - 0.000000000000000008646 87.0
YHH3_k127_8171953_11 4 iron, 4 sulfur cluster binding - - - 0.00000000000006101 76.0
YHH3_k127_8171953_12 2'-5' RNA ligase superfamily - - - 0.0000000009086 66.0
YHH3_k127_8171953_13 - - - - 0.000000001332 65.0
YHH3_k127_8171953_14 Helix-turn-helix XRE-family like proteins - - - 0.00000001359 61.0
YHH3_k127_8171953_15 PFAM CBS domain containing protein - - - 0.0000000393 58.0
YHH3_k127_8171953_2 TIGRFAM type I secretion membrane fusion protein, HlyD family K11003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008631 433.0
YHH3_k127_8171953_3 Dienelactone hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002671 259.0
YHH3_k127_8171953_4 OsmC-like protein K07397 - - 0.000000000000000000000000000000000000000000000000002674 185.0
YHH3_k127_8171953_5 PFAM Phosphoribosyl transferase domain K07100 - - 0.00000000000000000000000000000000000000000004068 168.0
YHH3_k127_8171953_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000003671 156.0
YHH3_k127_8171953_7 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000003289 154.0
YHH3_k127_8171953_8 response regulator - - - 0.0000000000000000000000000000002149 133.0
YHH3_k127_8171953_9 GYD domain - - - 0.000000000000000000000000003392 114.0
YHH3_k127_8182771_0 Phosphoribosyl synthetase-associated domain K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 382.0
YHH3_k127_8182771_1 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008039 284.0
YHH3_k127_8182771_2 Helix-turn-helix XRE-family like proteins - - - 0.000007896 51.0
YHH3_k127_8186756_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 3.367e-204 642.0
YHH3_k127_8186756_1 phosphomannomutase K01840 - 5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000992 525.0
YHH3_k127_8186756_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002265 350.0
YHH3_k127_8186756_3 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 304.0
YHH3_k127_8186756_4 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002346 267.0
YHH3_k127_8186756_5 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000008608 254.0
YHH3_k127_8186756_6 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000001124 184.0
YHH3_k127_8186756_7 Cell division protein FtsQ K03589 - - 0.0000000000009776 70.0
YHH3_k127_8283545_0 DNA polymerase X family K02347 - - 9.921e-221 698.0
YHH3_k127_8283545_1 Protein of unknown function (DUF933) K06942 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004253 526.0
YHH3_k127_8283545_2 Major facilitator Superfamily K05939 - 2.3.1.40,6.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004628 416.0
YHH3_k127_8283545_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000004975 106.0
YHH3_k127_8283545_4 Protein of unknown function (DUF2905) - - - 0.000000000000000000004449 94.0
YHH3_k127_8283545_5 Acetoacetyl-CoA reductase K00023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.36 0.000000000286 63.0
YHH3_k127_8283545_6 FAD-NAD(P)-binding - - - 0.0000007089 60.0
YHH3_k127_8299456_0 Belongs to the UPF0176 family K07146 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 475.0
YHH3_k127_8299456_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006503 415.0
YHH3_k127_8299456_2 SMART Tetratricopeptide domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 415.0
YHH3_k127_8299456_3 SEC-C Motif Domain Protein - - - 0.0000000000000000000000000000000000000000001593 173.0
YHH3_k127_8299456_4 Prepilin-type N-terminal cleavage methylation domain-containing protein - - - 0.000000000000000000000003201 113.0
YHH3_k127_8301818_0 type IV secretion system protein K03199 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001679 269.0
YHH3_k127_8301818_1 TrbC/VIRB2 family - - - 0.00000000000000008766 85.0
YHH3_k127_8301818_2 Helix-turn-helix domain - - - 0.000000004347 66.0
YHH3_k127_8305853_0 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 399.0
YHH3_k127_8305853_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007604 273.0
YHH3_k127_8305853_2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000009233 264.0
YHH3_k127_8305853_3 probably involved in intracellular septation K06190 - - 0.000000000000000000000000000000000000000000000002472 179.0
YHH3_k127_8305853_4 Thioesterase superfamily K10806 - - 0.00000000000000000000000000000000000000000004104 163.0
YHH3_k127_8305853_5 - - - - 0.00000000000000000000000000000000000000009253 158.0
YHH3_k127_8305853_6 high-affinity sulfate:proton symporter activity K06203 GO:0000096,GO:0000097,GO:0000103,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006520,GO:0006534,GO:0006790,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0008150,GO:0008152,GO:0008271,GO:0008272,GO:0008324,GO:0008509,GO:0008512,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009675,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015103,GO:0015116,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015296,GO:0015318,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0016053,GO:0019344,GO:0019752,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044425,GO:0044459,GO:0044464,GO:0046394,GO:0051179,GO:0051234,GO:0055085,GO:0071704,GO:0071944,GO:0072348,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901682,GO:1902358,GO:1902600 - 0.000000000000000000000000001218 121.0
YHH3_k127_8305853_7 Protein involved in outer membrane biogenesis - - - 0.000021 55.0
YHH3_k127_8348624_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 1.004e-250 790.0
YHH3_k127_8348624_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 483.0
YHH3_k127_8348624_10 Myotrophin - GO:0001558,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005856,GO:0006355,GO:0006417,GO:0006584,GO:0006725,GO:0006807,GO:0006950,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008064,GO:0008150,GO:0008152,GO:0008290,GO:0008361,GO:0009605,GO:0009611,GO:0009612,GO:0009628,GO:0009653,GO:0009712,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010611,GO:0010613,GO:0014742,GO:0014743,GO:0015629,GO:0016043,GO:0016202,GO:0018958,GO:0019219,GO:0019222,GO:0021533,GO:0021549,GO:0021575,GO:0021587,GO:0021681,GO:0021683,GO:0021684,GO:0021695,GO:0021696,GO:0021697,GO:0021707,GO:0021953,GO:0022008,GO:0022037,GO:0030154,GO:0030182,GO:0030307,GO:0030424,GO:0030832,GO:0030833,GO:0030834,GO:0030902,GO:0031099,GO:0031323,GO:0031326,GO:0032268,GO:0032271,GO:0032501,GO:0032502,GO:0032535,GO:0032956,GO:0032970,GO:0032991,GO:0033043,GO:0034248,GO:0040007,GO:0040008,GO:0042060,GO:0042246,GO:0042692,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043244,GO:0043254,GO:0043403,GO:0043502,GO:0043565,GO:0044057,GO:0044087,GO:0044093,GO:0044237,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045927,GO:0048471,GO:0048513,GO:0048518,GO:0048522,GO:0048583,GO:0048589,GO:0048634,GO:0048646,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051090,GO:0051091,GO:0051092,GO:0051128,GO:0051146,GO:0051171,GO:0051173,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051493,GO:0051716,GO:0060255,GO:0060322,GO:0061061,GO:0065007,GO:0065008,GO:0065009,GO:0071214,GO:0071260,GO:0071496,GO:0071704,GO:0071840,GO:0080090,GO:0090066,GO:0090257,GO:0097159,GO:0097458,GO:0104004,GO:0110053,GO:0120025,GO:1901360,GO:1901363,GO:1901564,GO:1901615,GO:1901861,GO:1901879,GO:1902903,GO:1903506,GO:2000026,GO:2000112,GO:2000812,GO:2001141 - 0.0000001476 63.0
YHH3_k127_8348624_2 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 312.0
YHH3_k127_8348624_3 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006378 278.0
YHH3_k127_8348624_4 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000008399 270.0
YHH3_k127_8348624_5 PFAM SPFH domain Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002142 250.0
YHH3_k127_8348624_6 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006257 241.0
YHH3_k127_8348624_7 Ankyrin repeat - - - 0.0000000000000000000000000003708 119.0
YHH3_k127_8348624_8 Protein of unknown function (DUF1467) - - - 0.00000000000004329 74.0
YHH3_k127_8348624_9 calcium- and calmodulin-responsive adenylate cyclase activity K01425,K21440 - 3.5.1.2 0.00000008394 64.0
YHH3_k127_8385523_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008753 525.0
YHH3_k127_8385523_1 glycyl-tRNA synthetase, alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 465.0
YHH3_k127_8385523_2 COG0616 Periplasmic serine proteases (ClpP class) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 321.0
YHH3_k127_8385523_3 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000001729 153.0
YHH3_k127_8385523_4 fructose-bisphosphate aldolase K11645 - 4.1.2.13 0.0000000000000000000000000001161 116.0
YHH3_k127_8449606_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 2.728e-315 989.0
YHH3_k127_8449606_1 Cation efflux family K13283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004702 270.0
YHH3_k127_8449606_2 Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus K07261 - - 0.00000000000000000000000000000000000000000000000000000000000000001739 233.0
YHH3_k127_8449606_3 GMP synthase C terminal domain K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000000000000000000001548 97.0
YHH3_k127_8449606_4 Sel1-like repeats. K07126 - - 0.000000000000000002704 88.0
YHH3_k127_8501481_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 9.031e-205 645.0
YHH3_k127_8501481_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005729 289.0
YHH3_k127_8501481_2 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000000000002424 196.0
YHH3_k127_8501481_3 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000005076 171.0
YHH3_k127_8501481_4 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000004262 166.0
YHH3_k127_8501481_5 Ribosomal protein L30 K02907 - - 0.0000000000000000016 86.0
YHH3_k127_8501481_6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00007463 45.0
YHH3_k127_8504718_0 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 476.0
YHH3_k127_8504718_1 ribosomal protein L11 K02687 - - 0.0000000000000000000000000000000007687 137.0
YHH3_k127_8549864_0 ATPase with chaperone activity K07391 - - 7.985e-196 623.0
YHH3_k127_8549864_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009045 607.0
YHH3_k127_8549864_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 472.0
YHH3_k127_8549864_3 lipoprotein releasing system, transmembrane protein, LolC E family' K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 454.0
YHH3_k127_8549864_4 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006807,GO:0006810,GO:0008104,GO:0008150,GO:0008152,GO:0015031,GO:0015399,GO:0015405,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0022804,GO:0022857,GO:0031224,GO:0032991,GO:0033036,GO:0042157,GO:0042160,GO:0042623,GO:0042626,GO:0042886,GO:0042953,GO:0043170,GO:0043190,GO:0043492,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901564,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002481 272.0
YHH3_k127_8549864_5 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005699 269.0
YHH3_k127_8549864_6 Kinase D-interacting substrate of K12460 GO:0000186,GO:0001932,GO:0001934,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005770,GO:0005829,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007399,GO:0008150,GO:0009719,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0010720,GO:0010975,GO:0010976,GO:0012505,GO:0019207,GO:0019220,GO:0019222,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0022008,GO:0023051,GO:0023052,GO:0023056,GO:0030154,GO:0030165,GO:0030234,GO:0031323,GO:0031325,GO:0031344,GO:0031346,GO:0031399,GO:0031401,GO:0031410,GO:0031982,GO:0032147,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032991,GO:0033674,GO:0038179,GO:0038180,GO:0042221,GO:0042325,GO:0042327,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043549,GO:0044093,GO:0044424,GO:0044444,GO:0044464,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045859,GO:0045860,GO:0045937,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051338,GO:0051347,GO:0051716,GO:0051960,GO:0051962,GO:0060255,GO:0060284,GO:0065007,GO:0065009,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071900,GO:0071902,GO:0080090,GO:0097708,GO:0098772,GO:0120035,GO:1902531,GO:1902533,GO:1990089,GO:1990090,GO:2000026 - 0.0000000002673 68.0
YHH3_k127_8766745_0 Glycosyl transferase family 41 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004326 374.0
YHH3_k127_8766745_1 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000006808 223.0
YHH3_k127_8807157_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 GO:0000166,GO:0003674,GO:0003824,GO:0004148,GO:0005488,GO:0005507,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009507,GO:0009536,GO:0010035,GO:0010038,GO:0016020,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0017076,GO:0019866,GO:0030554,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0046686,GO:0046872,GO:0046914,GO:0048046,GO:0050896,GO:0050897,GO:0055114,GO:0070469,GO:0097159,GO:0097367,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 604.0
YHH3_k127_8807157_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 319.0
YHH3_k127_8807157_2 Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006601 296.0
YHH3_k127_8807157_3 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000000000002747 171.0
YHH3_k127_8807157_4 - - - - 0.0000000001013 64.0
YHH3_k127_8829101_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K07516 - 1.1.1.35 1.177e-233 736.0
YHH3_k127_8829101_1 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000776 574.0
YHH3_k127_8829101_2 Belongs to the thiolase family K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009262 520.0
YHH3_k127_8891225_0 Nucleotidyl transferase AbiEii toxin, Type IV TA system K09144 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 492.0
YHH3_k127_8891225_1 AbiEi antitoxin C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 372.0
YHH3_k127_8891225_2 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002864 240.0
YHH3_k127_8891225_3 type I restriction modification DNA specificity domain K01153,K01154 - 3.1.21.3 0.0000000002588 62.0
YHH3_k127_8907996_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 602.0
YHH3_k127_8907996_1 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 341.0
YHH3_k127_8907996_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003229 338.0
YHH3_k127_8907996_3 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01450,K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.31,3.5.1.88 0.0000000000000000000000000000000000000000000000000000007817 197.0
YHH3_k127_8907996_4 Ankyrin repeat - - - 0.000000000000005468 84.0
YHH3_k127_8907996_5 - - - - 0.000001866 52.0
YHH3_k127_893621_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 397.0
YHH3_k127_893621_1 COG2913 Small protein A (tmRNA-binding) - - - 0.0000000000000000000003344 102.0
YHH3_k127_893621_2 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000001628 92.0
YHH3_k127_893621_3 Histidine kinase - - - 0.00000000000001383 83.0
YHH3_k127_9003544_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.17e-225 721.0
YHH3_k127_9003544_1 DNA-damage-inducible protein d K14623 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 409.0
YHH3_k127_9003544_2 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 398.0
YHH3_k127_9003544_3 molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000109 189.0
YHH3_k127_9014667_0 ADP-glyceromanno-heptose 6-epimerase activity - - - 8.09e-228 714.0
YHH3_k127_9014667_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 3.001e-204 648.0
YHH3_k127_9014667_2 Ketoacyl-synthetase C-terminal extension K21783 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 606.0
YHH3_k127_9014667_3 Biotin-lipoyl like K01993,K16922 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 456.0
YHH3_k127_9014667_4 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003667 268.0
YHH3_k127_9014667_5 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000004365 66.0
YHH3_k127_9014667_6 COG1538 Outer membrane protein K12340 - - 0.00000000007994 72.0
YHH3_k127_9022704_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 300.0
YHH3_k127_9022704_1 Prepilin-type N-terminal cleavage methylation domain-containing protein - - - 0.00000000000000000000000005912 117.0
YHH3_k127_9053203_1 ORF located using Blastx - - - 0.000000005139 57.0
YHH3_k127_9053203_2 COG NOG15344 non supervised orthologous group - - - 0.000000006949 61.0
YHH3_k127_9053203_3 - - - - 0.000000007545 59.0
YHH3_k127_9053203_4 mitogen-activated protein kinase kinase K20603 GO:0000165,GO:0000187,GO:0001932,GO:0001934,GO:0002376,GO:0003002,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004708,GO:0004712,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006950,GO:0006952,GO:0006955,GO:0006970,GO:0007154,GO:0007165,GO:0007275,GO:0007346,GO:0007389,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009605,GO:0009607,GO:0009628,GO:0009631,GO:0009651,GO:0009814,GO:0009893,GO:0009914,GO:0009966,GO:0009967,GO:0009987,GO:0010051,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0010817,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019220,GO:0019222,GO:0019538,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0031098,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0032147,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0033554,GO:0033674,GO:0035556,GO:0036211,GO:0042325,GO:0042327,GO:0043085,GO:0043170,GO:0043207,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043549,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0045087,GO:0045859,GO:0045860,GO:0045937,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051338,GO:0051347,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0060255,GO:0060918,GO:0065007,GO:0065008,GO:0065009,GO:0071704,GO:0071900,GO:0071902,GO:0071944,GO:0080090,GO:0098542,GO:0140096,GO:1901564,GO:1902531,GO:1902533 2.7.12.2 0.0000005419 54.0
YHH3_k127_9053203_5 - - - - 0.00002496 49.0
YHH3_k127_9053203_6 - - - - 0.0001278 45.0
YHH3_k127_9053203_8 Beta-carotene 15,15'-monooxygenase - - - 0.0001894 53.0
YHH3_k127_9100195_0 transposase IS116 IS110 IS902 family K07486 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 369.0
YHH3_k127_9203311_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.272e-255 812.0
YHH3_k127_9203311_1 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000703 581.0
YHH3_k127_9203311_2 alanine symporter K03310 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008183 489.0
YHH3_k127_9203311_3 The M ring may be actively involved in energy transduction K02409 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 308.0
YHH3_k127_9203311_4 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000001274 237.0
YHH3_k127_9203311_5 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000002645 155.0
YHH3_k127_9203311_6 Cold shock K03704 - - 0.0000000000000000000000000001675 115.0
YHH3_k127_9203311_7 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000001912 97.0
YHH3_k127_9362891_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1057.0
YHH3_k127_9362891_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 8.627e-198 625.0
YHH3_k127_9362891_2 transhydrogenase subunit alpha K00324 GO:0000166,GO:0003674,GO:0003824,GO:0003957,GO:0005215,GO:0005488,GO:0005515,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006740,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0008746,GO:0008750,GO:0009117,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0016491,GO:0016651,GO:0016652,GO:0019362,GO:0019637,GO:0022857,GO:0022890,GO:0034220,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046496,GO:0046983,GO:0048037,GO:0050662,GO:0051179,GO:0051186,GO:0051234,GO:0051287,GO:0055085,GO:0055086,GO:0055114,GO:0070403,GO:0070404,GO:0071704,GO:0072524,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1902600 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004304 331.0
YHH3_k127_9362891_3 COG1393 Arsenate reductase and related proteins, glutaredoxin family K00537 - 1.20.4.1 0.00000000000000000000000000000000000000000003547 163.0
YHH3_k127_9362891_4 NAD(P) transhydrogenase subunit alpha K00324 GO:0008150,GO:0008152,GO:0055114 1.6.1.2 0.0000000000000000000000000000000000002136 145.0
YHH3_k127_9399845_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007638 574.0
YHH3_k127_9399845_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000009654 232.0
YHH3_k127_9399845_2 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000009439 108.0
YHH3_k127_945472_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 2.627e-302 941.0
YHH3_k127_945472_1 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003167 282.0
YHH3_k127_9479475_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1209.0
YHH3_k127_9479475_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038,K21977 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000002768 219.0
YHH3_k127_9479475_2 Flavinator of succinate dehydrogenase K09159 - - 0.00000000000000002959 84.0
YHH3_k127_9541897_0 COG0643 Chemotaxis protein histidine kinase and related kinases K03407 - 2.7.13.3 8.645e-236 760.0
YHH3_k127_9541897_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 3.644e-232 725.0
YHH3_k127_9541897_10 low-complexity proteins - - - 0.000000000000000000626 103.0
YHH3_k127_9541897_2 Glycosyl transferase family group 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 507.0
YHH3_k127_9541897_3 Predicted permease YjgP/YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 348.0
YHH3_k127_9541897_4 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003786 333.0
YHH3_k127_9541897_5 Predicted permease YjgP/YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004452 283.0
YHH3_k127_9541897_6 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000001217 271.0
YHH3_k127_9541897_7 COG1131 ABC-type multidrug transport system, ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000005199 218.0
YHH3_k127_9541897_8 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000001105 156.0
YHH3_k127_9541897_9 chemotaxis protein K03408 - - 0.0000000000000000000000000000003986 128.0
YHH3_k127_9615834_0 aminopeptidase K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007509 561.0
YHH3_k127_9615834_1 PHB de-polymerase C-terminus K05973 - 3.1.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 462.0
YHH3_k127_9615834_2 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.00000000000000000000000000000000000000000000000000000000007413 207.0
YHH3_k127_9615834_3 transcriptional regulator - - - 0.00000000000000000000002234 105.0
YHH3_k127_9615834_4 Trypsin-like peptidase domain - - - 0.0000000000000000000006752 105.0
YHH3_k127_9646451_0 transferase activity, transferring glycosyl groups K21011,K21012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006116 515.0
YHH3_k127_9646451_1 Putative exopolysaccharide Exporter (EPS-E) K21012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 392.0
YHH3_k127_9646451_2 Transcriptional regulator K07667 - - 0.0000000000000000000000000000001242 126.0
YHH3_k127_9646451_3 peptidyl-tyrosine sulfation K21010 - - 0.00000000000000000000001396 113.0
YHH3_k127_9646451_4 Gaf domain K02584,K07713,K11908,K12266,K15836,K21009,K21405 - - 0.0000000000000000006988 93.0
YHH3_k127_9762270_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007321 511.0
YHH3_k127_9762270_1 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 452.0
YHH3_k127_9762270_2 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000006708 256.0
YHH3_k127_9762270_3 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000004646 226.0
YHH3_k127_9762270_4 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000002506 145.0
YHH3_k127_9762270_5 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000001043 111.0
YHH3_k127_9762270_6 cheY-homologous receiver domain K03413 - - 0.000000000000000000000002551 106.0
YHH3_k127_9762270_7 Transmembrane protein 43 - - - 0.00000000000000000003393 106.0
YHH3_k127_9762270_8 Protein of unknown function (DUF465) - - - 0.00000001974 58.0
YHH3_k127_9762270_9 Belongs to the mitochondrial carrier (TC 2.A.29) family K15100 GO:0003674,GO:0005215,GO:0005342,GO:0005371,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006811,GO:0006820,GO:0006839,GO:0006842,GO:0006843,GO:0006855,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015137,GO:0015142,GO:0015238,GO:0015291,GO:0015318,GO:0015711,GO:0015746,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0019866,GO:0022804,GO:0022857,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0034220,GO:0035674,GO:0042221,GO:0042493,GO:0042891,GO:0042895,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0098656,GO:1903825,GO:1905039,GO:1990542,GO:1990546 - 0.000008491 57.0
YHH3_k127_9789177_0 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000001297 234.0
YHH3_k127_9789177_1 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.00000000000000000000000000000000000000000000001615 181.0
YHH3_k127_9789177_2 DNA-3-methyladenine glycosylase I K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000006152 164.0
YHH3_k127_9789177_3 gag-polyprotein putative aspartyl protease K06985 - - 0.00000000000000000000000000000132 128.0
YHH3_k127_9789177_4 COG0784 FOG CheY-like receiver - - - 0.0000000000000000000000001375 112.0
YHH3_k127_9789177_5 GIY-YIG catalytic domain - - - 0.000000000000000000001786 93.0
YHH3_k127_9789177_6 Acetyltransferase (GNAT) domain - GO:0003674,GO:0003824,GO:0016740,GO:0016746,GO:0016747 - 0.00000000000000002589 87.0
YHH3_k127_9789177_7 GIY-YIG catalytic domain - - - 0.00000000003298 64.0
YHH3_k127_9844530_0 to multidrug resistance ABC transporter ATP-binding protein K06147 - - 1.463e-203 650.0
YHH3_k127_9844530_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 474.0
YHH3_k127_9898136_0 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497,K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000005201 247.0
YHH3_k127_9898136_1 Protein of unknown function (DUF3179) - - - 0.000000000000000000000000000000000000000000000000000000000000004334 223.0
YHH3_k127_9898136_2 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.000000000000000000000000000000000000000000000000000009719 194.0
YHH3_k127_9898136_3 bond formation protein, DsbB - - - 0.0000000000000000000000001349 113.0
YHH3_k127_9903687_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 4.994e-275 857.0
YHH3_k127_9903687_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 1.726e-200 631.0
YHH3_k127_9903687_2 fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 310.0
YHH3_k127_9903687_3 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003654 280.0
YHH3_k127_9903687_4 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000716 222.0
YHH3_k127_9903687_5 AsmA family K07289 - - 0.000000000000000000000000000000000000000000001107 180.0
YHH3_k127_9903687_6 Lipopolysaccharide assembly protein A domain K08992 - - 0.00006997 49.0