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Overview

ID MAG04611
Name YHH3_bin.92
Sample SMP0123
Taxonomy
Kingdom Bacteria
Phylum Desulfobacterota
Class Desulfobulbia
Order Desulfobulbales
Family Desulfobulbaceae
Genus UBA10518
Species
Assembly information
Completeness (%) 95.54
Contamination (%) 2.72
GC content (%) 56.0
N50 (bp) 18,327
Genome size (bp) 3,429,299

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2953

Gene name Description KEGG GOs EC E-value Score Sequence
YHH3_k127_10174819_0 cellulose binding - - - 1.441e-297 925.0
YHH3_k127_10178733_0 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 371.0
YHH3_k127_10178733_1 Protein tyrosine kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 368.0
YHH3_k127_10178733_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005833 248.0
YHH3_k127_10178733_3 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001127 243.0
YHH3_k127_10178733_4 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000001195 158.0
YHH3_k127_10178733_5 PFAM Carboxymuconolactone decarboxylase - - - 0.00000000000000000000000000000000000002592 147.0
YHH3_k127_10178733_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000001645 78.0
YHH3_k127_10178733_7 Caspase domain - - - 0.0000005779 55.0
YHH3_k127_10214870_0 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005777 317.0
YHH3_k127_10214870_1 Pentapeptide repeats (9 copies) - - - 0.00000000000000000000000000000000000000000000002592 179.0
YHH3_k127_10214870_2 M18 family aminopeptidase K01267 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008270,GO:0016787,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.11.21 0.0000000000007559 69.0
YHH3_k127_1029350_0 PFAM PhoH-like protein K07175 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002911 594.0
YHH3_k127_1029350_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 532.0
YHH3_k127_1029350_2 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 454.0
YHH3_k127_1029350_3 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005873 383.0
YHH3_k127_1029350_4 PFAM Radical SAM K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 300.0
YHH3_k127_1029350_5 - - - - 0.0000000000000000000000000000000000000000000000000002392 192.0
YHH3_k127_1029350_6 - - - - 0.000000000000000000000000000000000000000000000000006023 187.0
YHH3_k127_1029350_7 - - - - 0.00000000000000000000000000000000000000000003744 163.0
YHH3_k127_10376497_0 MgsA AAA+ ATPase C terminal K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 490.0
YHH3_k127_10376497_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 480.0
YHH3_k127_10376497_2 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 286.0
YHH3_k127_10376497_3 Belongs to the 5'-nucleotidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005385 264.0
YHH3_k127_10641173_0 family UPF0324 - - - 4.406e-285 884.0
YHH3_k127_10641173_1 histidine kinase A domain protein - - - 4.08e-215 697.0
YHH3_k127_10641173_10 - - - - 0.0000000000000000005508 89.0
YHH3_k127_10641173_11 serine-type endopeptidase activity K20276 - - 0.000000000000000008077 99.0
YHH3_k127_10641173_12 Peptidase C10 family - - - 0.00000000002377 78.0
YHH3_k127_10641173_13 Conserved repeat domain - - - 0.00000002795 68.0
YHH3_k127_10641173_14 Right handed beta helix region - - - 0.00002092 58.0
YHH3_k127_10641173_2 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006017 554.0
YHH3_k127_10641173_3 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 475.0
YHH3_k127_10641173_4 NADH Ubiquinone plastoquinone (Complex I) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 430.0
YHH3_k127_10641173_5 NADH ubiquinone oxidoreductase subunit 5 (chain L) multisubunit Na H antiporter MnhA subunit K00341,K05568,K12139 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007875 385.0
YHH3_k127_10641173_6 Protein of unknown function (DUF3300) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 393.0
YHH3_k127_10641173_7 Protein of unknown function (DUF2950) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007569 334.0
YHH3_k127_10641173_8 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001139 312.0
YHH3_k127_10641173_9 PFAM Transposase IS200 like - - - 0.000000000000000000000000000000001497 133.0
YHH3_k127_10649512_0 His Kinase A (phosphoacceptor) domain K02668,K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009347 547.0
YHH3_k127_10649512_1 PFAM Excinuclease ABC C subunit domain protein K07461 - - 0.0000000000000000000000000000000000004286 141.0
YHH3_k127_10650744_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 465.0
YHH3_k127_10650744_1 4Fe-4S dicluster domain K00124 - - 0.000000000000000000000000000000000000003843 155.0
YHH3_k127_10650744_2 molybdopterin oxidoreductase Fe4S4 K00123 - 1.17.1.9 0.0000000000000000000000000000000000002197 147.0
YHH3_k127_10650744_3 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07714 - - 0.00000000000008062 73.0
YHH3_k127_10651844_0 TonB-dependent receptor K02014 - - 1.292e-301 938.0
YHH3_k127_10651844_1 Periplasmic sensor domain - - - 9.576e-239 769.0
YHH3_k127_10651844_2 PFAM ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 362.0
YHH3_k127_10651844_3 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001064 256.0
YHH3_k127_10651844_4 PFAM EAL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002048 238.0
YHH3_k127_10651844_5 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000193 179.0
YHH3_k127_10656729_0 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 469.0
YHH3_k127_10656729_1 4-hydroxybenzoate polyprenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005652 414.0
YHH3_k127_10656729_2 PFAM Response regulator receiver domain K02481,K07712,K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 377.0
YHH3_k127_10656729_3 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004669 361.0
YHH3_k127_10656729_4 Belongs to the MEMO1 family K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 293.0
YHH3_k127_10656729_5 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004216 250.0
YHH3_k127_10656729_6 Hsp20/alpha crystallin family K13993 - - 0.000000000000000000000000000000000000000000000000001122 187.0
YHH3_k127_10656729_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000001453 169.0
YHH3_k127_10693718_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1489.0
YHH3_k127_10693718_1 Transcriptional regulator, LysR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 363.0
YHH3_k127_10693718_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000782 361.0
YHH3_k127_10693718_3 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 - 3.1.11.5 0.000000000000000000000000000000000000000000000000000001254 197.0
YHH3_k127_10693718_4 PFAM Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000073 136.0
YHH3_k127_10693718_5 PFAM RNP-1 like RNA-binding protein - - - 0.0000000000000000000000000002232 118.0
YHH3_k127_10693718_6 PFAM Glycosyl transferase family 2 - - - 0.000000006599 58.0
YHH3_k127_10735755_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 413.0
YHH3_k127_10735755_1 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 379.0
YHH3_k127_10735755_2 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000002955 238.0
YHH3_k127_10735755_3 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000002314 121.0
YHH3_k127_10808604_0 prephenate dehydrogenase K04517,K14187 - 1.3.1.12,5.4.99.5 3.201e-220 696.0
YHH3_k127_10808604_1 DEAD DEAH box helicase domain protein K06877 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 444.0
YHH3_k127_10808604_2 lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008189 295.0
YHH3_k127_10808604_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00003947 48.0
YHH3_k127_10884172_0 Alpha amylase, C-terminal all-beta domain K00700 - 2.4.1.18 0.0 1037.0
YHH3_k127_10884172_1 Iron-containing alcohol dehydrogenase K00001,K08325 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 523.0
YHH3_k127_10884172_10 PFAM peptidase K21471 - - 0.000000000000000000000000000000000000000000000000000000000000000000001459 254.0
YHH3_k127_10884172_11 protein conserved in bacteria (DUF2062) K09928 - - 0.00000000000000000000000000000000000000001786 162.0
YHH3_k127_10884172_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 521.0
YHH3_k127_10884172_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 441.0
YHH3_k127_10884172_4 Protein of unknown function (DUF445) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 419.0
YHH3_k127_10884172_5 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 370.0
YHH3_k127_10884172_6 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 374.0
YHH3_k127_10884172_7 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 321.0
YHH3_k127_10884172_8 PFAM ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 287.0
YHH3_k127_10884172_9 Haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000021 248.0
YHH3_k127_1091143_0 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 345.0
YHH3_k127_1091143_1 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000000000000000000000000000000000000000000000000000000004966 232.0
YHH3_k127_1091143_2 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000007944 138.0
YHH3_k127_10929722_0 PFAM NAD-dependent epimerase dehydratase K08678 - 4.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003808 567.0
YHH3_k127_10929722_1 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005497 393.0
YHH3_k127_10929722_2 GDP-mannose 4,6 dehydratase K01711 - 4.2.1.47 0.00000000000000000232 88.0
YHH3_k127_10951679_0 plastoquinone (complex I) K05568,K12137 - - 6.945e-295 914.0
YHH3_k127_10951679_1 Proton-conducting membrane transporter K05568 - - 1.288e-265 822.0
YHH3_k127_10951679_2 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 1.272e-263 818.0
YHH3_k127_10951679_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008323 574.0
YHH3_k127_10951679_4 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000006938 142.0
YHH3_k127_10951679_5 - - - - 0.000000000000000000002191 100.0
YHH3_k127_10968173_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 535.0
YHH3_k127_10984681_0 Catalase K03781 - 1.11.1.6 4.395e-266 824.0
YHH3_k127_10984681_1 Multicopper oxidase - - - 4.174e-263 834.0
YHH3_k127_10984681_10 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000000000002636 200.0
YHH3_k127_10984681_11 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000000471 193.0
YHH3_k127_10984681_12 response to abiotic stimulus K06867 - - 0.00000000000000000000000000000000000000000000001479 177.0
YHH3_k127_10984681_13 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000000001715 176.0
YHH3_k127_10984681_14 bacterial OsmY and nodulation domain - - - 0.00000000000000000000000000000000000000000000001734 182.0
YHH3_k127_10984681_15 Response regulator, receiver K11443 - - 0.0000000000000000000000000000000000000000000001465 171.0
YHH3_k127_10984681_16 Ferric uptake regulator family K09825 - - 0.0000000000000000000000000000000000000000000002095 171.0
YHH3_k127_10984681_17 Histidine phosphatase superfamily (branch 1) K08296 - - 0.00000000000000000000000000000000002447 139.0
YHH3_k127_10984681_18 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000003389 126.0
YHH3_k127_10984681_19 Protein of unknown function DUF134 - - - 0.00000000000000000000000002375 111.0
YHH3_k127_10984681_2 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 7.522e-262 840.0
YHH3_k127_10984681_20 - - - - 0.0000000000000000000000001399 113.0
YHH3_k127_10984681_21 - - - - 0.00000000000000000000001451 105.0
YHH3_k127_10984681_24 Allergen V5 Tpx-1 family protein K06182,K08372,K12065,K12685,K16785,K16786,K16787 - 5.4.99.21 0.0000000000007825 81.0
YHH3_k127_10984681_25 - - - - 0.00000000005845 66.0
YHH3_k127_10984681_26 LTXXQ motif family protein - - - 0.00005906 52.0
YHH3_k127_10984681_27 Por secretion system C-terminal sorting domain - - - 0.00005979 54.0
YHH3_k127_10984681_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 3.411e-213 702.0
YHH3_k127_10984681_4 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009298 478.0
YHH3_k127_10984681_5 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003447 454.0
YHH3_k127_10984681_6 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 394.0
YHH3_k127_10984681_7 GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006825 327.0
YHH3_k127_10984681_8 Nudix N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 306.0
YHH3_k127_10984681_9 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005141 274.0
YHH3_k127_10988892_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005221 511.0
YHH3_k127_10988892_1 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003548 339.0
YHH3_k127_10988892_2 RNA methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000009376 227.0
YHH3_k127_11000928_0 PFAM Carbamoyl-phosphate synthase L chain K01959,K01961 - 6.3.4.14,6.4.1.1,6.4.1.2 6.849e-237 739.0
YHH3_k127_11000928_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 509.0
YHH3_k127_11000928_2 Conserved carboxylase domain K01958 - 6.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009005 357.0
YHH3_k127_11000928_3 - K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 360.0
YHH3_k127_11000928_4 PFAM Dinitrogenase iron-molybdenum cofactor - - - 0.0000000000000000000000000000000000000000000000000000000003799 203.0
YHH3_k127_11000928_5 PFAM Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000000000000000000000000000000000001158 166.0
YHH3_k127_11000928_6 DsrE/DsrF-like family - - - 0.00000000000000000000000000003777 118.0
YHH3_k127_11000928_7 CobQ CobB MinD ParA nucleotide binding domain - - - 0.000000000000000000002179 95.0
YHH3_k127_11000928_8 sulfur carrier activity K04085,K07112 GO:0008150,GO:0009987,GO:0019725,GO:0042592,GO:0048878,GO:0055082,GO:0065007,GO:0065008 - 0.00000000000001108 82.0
YHH3_k127_11028885_0 PFAM Na Pi-cotransporter K03324 - - 1.97e-243 764.0
YHH3_k127_11028885_1 Protein of unknown function (DUF1722) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 495.0
YHH3_k127_11028885_2 CO dehydrogenase acetyl-CoA synthase gamma subunit (Corrinoid Fe-S protein) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001602 272.0
YHH3_k127_11028885_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001248 252.0
YHH3_k127_11028885_4 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000001479 200.0
YHH3_k127_11028885_5 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.000000000000000000000000009228 114.0
YHH3_k127_11028885_6 PFAM thioesterase superfamily protein - - - 0.0000000000000000000000311 101.0
YHH3_k127_1104971_0 Peptidase M16C associated K06972 - - 0.0 1167.0
YHH3_k127_1104971_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008761 606.0
YHH3_k127_1104971_2 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 419.0
YHH3_k127_1104971_3 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008317 379.0
YHH3_k127_1104971_4 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006221 349.0
YHH3_k127_1104971_5 SH3 domain - - - 0.00000000000000000000000000000000000000000000000000000001386 201.0
YHH3_k127_1104971_6 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000000000000003419 177.0
YHH3_k127_1104971_7 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000005994 177.0
YHH3_k127_1104971_8 TIGRFAM Protein of - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000002495 105.0
YHH3_k127_1104971_9 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000001695 87.0
YHH3_k127_1106651_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 6.991e-304 939.0
YHH3_k127_1106651_1 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 1.545e-217 692.0
YHH3_k127_1106651_2 PFAM aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 602.0
YHH3_k127_1106651_3 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 605.0
YHH3_k127_1106651_4 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009915 410.0
YHH3_k127_1106651_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002391 281.0
YHH3_k127_1106651_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00330 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000004145 219.0
YHH3_k127_1106651_7 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.0000000000000000000000000000000000000003736 154.0
YHH3_k127_1106651_8 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K00332 - 1.6.5.3 0.00000000005928 70.0
YHH3_k127_11087801_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 1.391e-219 694.0
YHH3_k127_11087801_1 PFAM doubled CXXCH domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004047 458.0
YHH3_k127_11087801_2 PPIC-type PPIASE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 330.0
YHH3_k127_11087801_3 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000001789 249.0
YHH3_k127_11087801_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001357 244.0
YHH3_k127_11087801_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000001812 235.0
YHH3_k127_11087801_7 Peptidoglycan-synthase activator LpoB - - - 0.00000000000000000000000000000000000000008565 158.0
YHH3_k127_11087801_8 - - - - 0.0000000000000000000000000000000002484 152.0
YHH3_k127_11094186_0 Domain of unknown function (DUF4143) K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000002897 228.0
YHH3_k127_11094186_1 Protein of unknown function (DUF1302) - - - 0.000000000000000000000000000000000000000000000000000000005909 214.0
YHH3_k127_11095945_0 Tetratricopeptide repeat - - - 5.475e-197 630.0
YHH3_k127_11095945_1 Adenylosuccinate lyase C-terminus K01756,K01857 - 4.3.2.2,5.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 450.0
YHH3_k127_11095945_2 Domain of unknown function (DUF4143) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 363.0
YHH3_k127_11095945_3 3-carboxy-cis,cis-muconate cycloisomerase K01857 - 5.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008482 341.0
YHH3_k127_11095945_4 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003838 293.0
YHH3_k127_11095945_5 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001623 254.0
YHH3_k127_11095945_7 Coatomer epsilon subunit - - - 0.00009517 52.0
YHH3_k127_11131979_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004592 398.0
YHH3_k127_11131979_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005794 362.0
YHH3_k127_11131979_10 Sirohaem biosynthesis protein central K02304 - 1.3.1.76,4.99.1.4 0.0000000004252 62.0
YHH3_k127_11131979_2 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 362.0
YHH3_k127_11131979_3 Lysine methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004664 264.0
YHH3_k127_11131979_4 Protein of unknown function (DUF2959) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004795 244.0
YHH3_k127_11131979_5 molybdenum cofactor guanylyltransferase activity K03637,K03752,K13818 - 2.7.7.77,4.6.1.17 0.00000000000000000000000000000000000000000000000000000000001434 214.0
YHH3_k127_11131979_6 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000001692 193.0
YHH3_k127_11131979_7 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.000000000000000000000000000000000000000000000000001432 192.0
YHH3_k127_11131979_8 regulatory protein, FmdB family - - - 0.00000000000000000000000002477 110.0
YHH3_k127_11134374_0 Bacterial regulatory protein, Fis family K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 549.0
YHH3_k127_11134374_1 PFAM aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 421.0
YHH3_k127_11134374_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 345.0
YHH3_k127_11134374_3 ThiF family K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005477 335.0
YHH3_k127_11134374_4 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005869 325.0
YHH3_k127_11134374_5 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000000002158 138.0
YHH3_k127_11134374_6 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.000000000000000000000000000001967 123.0
YHH3_k127_11134374_7 - - - - 0.00000000000000000000002317 107.0
YHH3_k127_11134374_8 ThiS family - - - 0.00000000000000000001793 92.0
YHH3_k127_11170659_0 Citrate transporter - - - 7.129e-265 828.0
YHH3_k127_11170659_1 Histidine Phosphotransfer domain K03407 - 2.7.13.3 1.71e-228 728.0
YHH3_k127_11170659_10 PFAM Late competence development protein ComFB - - - 0.000000000000000000002299 96.0
YHH3_k127_11170659_11 HD domain K13815 - - 0.000000000000000001199 96.0
YHH3_k127_11170659_12 GHKL domain - - - 0.000000000000005554 89.0
YHH3_k127_11170659_13 Chemotaxis sensory transducer - - - 0.0000000000001205 85.0
YHH3_k127_11170659_15 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000001636 79.0
YHH3_k127_11170659_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 512.0
YHH3_k127_11170659_3 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008029 321.0
YHH3_k127_11170659_4 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 291.0
YHH3_k127_11170659_5 PFAM CheW domain protein K03408 - - 0.0000000000000000000000000000000000000000000002245 172.0
YHH3_k127_11170659_6 Histidine kinase - - - 0.000000000000000000000000000000000000000000001275 186.0
YHH3_k127_11170659_7 Response regulator receiver domain K03413 - - 0.000000000000000000000000000000000000000000005891 166.0
YHH3_k127_11170659_8 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000001729 150.0
YHH3_k127_11170659_9 Methyltransferase, chemotaxis proteins K00575,K03411,K03412 - 2.1.1.80,3.1.1.61,3.5.1.44 0.0000000000000000000000000001138 124.0
YHH3_k127_1119497_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 3.03e-267 845.0
YHH3_k127_1119497_1 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530,K04764 - - 0.000000000000000000000000000000000000001558 149.0
YHH3_k127_1119497_2 Regulatory protein - - - 0.00000000000000000000000000173 116.0
YHH3_k127_1119497_3 hydrolase K01048 - 3.1.1.5 0.00005153 47.0
YHH3_k127_11201151_0 Domain of Unknown Function (DUF748) - - - 7.237e-201 669.0
YHH3_k127_11201151_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 518.0
YHH3_k127_11313595_0 IMP dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 313.0
YHH3_k127_11313595_1 Phage integrase, N-terminal SAM-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 289.0
YHH3_k127_11313595_2 PIN domain K07062 - - 0.00000000000000000000000000000000000000000000002305 173.0
YHH3_k127_11313595_3 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.00000000000000000000000001302 111.0
YHH3_k127_11313595_5 PIN domain - - - 0.0000000000000000005947 91.0
YHH3_k127_11313595_6 toxin-antitoxin pair type II binding - - - 0.00000000000000000187 87.0
YHH3_k127_11345812_0 Sigma-54 interaction domain K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 476.0
YHH3_k127_11345812_1 PFAM Antibiotic biosynthesis monooxygenase - - - 0.0000000000756 66.0
YHH3_k127_11365973_0 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 6.959e-198 627.0
YHH3_k127_11365973_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 545.0
YHH3_k127_11365973_10 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003723 266.0
YHH3_k127_11365973_11 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000004908 229.0
YHH3_k127_11365973_12 Histidine phosphatase superfamily (branch 1) K08296 - - 0.0000000000000000000000000000000000000000000001744 175.0
YHH3_k127_11365973_13 phosphorelay signal transduction system - - - 0.0000000000000000000002785 105.0
YHH3_k127_11365973_14 ThiS family K03154 - - 0.00000000009229 64.0
YHH3_k127_11365973_2 Biotin and Thiamin Synthesis associated K03150 - 4.1.99.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007564 509.0
YHH3_k127_11365973_3 TIGRFAM polyphosphate kinase 2, PA0141 family K22468 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007786 435.0
YHH3_k127_11365973_4 TIGRFAM polyphosphate kinase 2, PA0141 family K22468 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008186 416.0
YHH3_k127_11365973_5 CHAD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 421.0
YHH3_k127_11365973_6 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K04042,K11528 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006422 395.0
YHH3_k127_11365973_7 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 377.0
YHH3_k127_11365973_8 involved in chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 362.0
YHH3_k127_11365973_9 WYL domain K13573 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007396 342.0
YHH3_k127_1143798_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007966 449.0
YHH3_k127_1143798_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 GO:0000166,GO:0000724,GO:0000725,GO:0003674,GO:0003824,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008854,GO:0009338,GO:0009987,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043142,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003798 291.0
YHH3_k127_11445093_0 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 594.0
YHH3_k127_11445093_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007147 447.0
YHH3_k127_11445093_10 domain protein - - - 0.000001508 63.0
YHH3_k127_11445093_11 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00002656 46.0
YHH3_k127_11445093_13 transcription factor binding - - - 0.00005505 53.0
YHH3_k127_11445093_2 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003678 370.0
YHH3_k127_11445093_3 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 342.0
YHH3_k127_11445093_4 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 319.0
YHH3_k127_11445093_5 PFAM Uncharacterised protein family (UPF0153) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001182 256.0
YHH3_k127_11445093_6 AMMECR1 K09141 - - 0.0000000000000000000000000000000000000000000000000000000000007704 218.0
YHH3_k127_11445093_7 Protein of unknown function (DUF1566) - - - 0.0000000000000000000001135 106.0
YHH3_k127_11445093_9 Amb_all K01728 - 4.2.2.2 0.000001146 63.0
YHH3_k127_114705_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1158.0
YHH3_k127_114705_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 4.468e-244 759.0
YHH3_k127_114705_2 PFAM aminotransferase class I and II K11358 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 569.0
YHH3_k127_114705_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 454.0
YHH3_k127_114705_4 Tellurite resistance protein TerB K05801 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005138 428.0
YHH3_k127_114705_5 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004752 342.0
YHH3_k127_114705_6 YbbR-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005654 299.0
YHH3_k127_114705_7 Domain of Unknown Function (DUF748) - - - 0.000000000000000000000001143 122.0
YHH3_k127_11481520_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 1.958e-275 854.0
YHH3_k127_11481520_1 PFAM Tetratricopeptide - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006021 275.0
YHH3_k127_11481520_2 Diguanylate cyclase, GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000003608 203.0
YHH3_k127_11481520_3 - - - - 0.0000000000000000000000000000000000002566 145.0
YHH3_k127_11481520_4 Uncharacterized conserved protein (DUF2075) K09384 - - 0.00000000000002166 73.0
YHH3_k127_11488159_0 Rubrerythrin K22405 - 1.6.3.4 0.000000000000000000000000000000000000000000000000000007216 206.0
YHH3_k127_11488159_2 - - - - 0.0004214 50.0
YHH3_k127_11566049_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 1.248e-307 950.0
YHH3_k127_11566049_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 8.897e-227 718.0
YHH3_k127_11566049_10 2 iron, 2 sulfur cluster binding K00303 - 1.5.3.1 0.000000000000000000002643 96.0
YHH3_k127_11566049_11 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0007843 43.0
YHH3_k127_11566049_2 Belongs to the ABC transporter superfamily K02031,K02032,K13892,K13896 - - 1.004e-200 641.0
YHH3_k127_11566049_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 619.0
YHH3_k127_11566049_4 response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 569.0
YHH3_k127_11566049_5 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004276 477.0
YHH3_k127_11566049_6 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002819 288.0
YHH3_k127_11566049_7 transcriptional regulator K07722 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000002386 225.0
YHH3_k127_11566049_8 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000000000000000056 199.0
YHH3_k127_11566049_9 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000005761 130.0
YHH3_k127_11567155_0 TIGRFAM aconitate hydratase K01681 - 4.2.1.3 0.0 1009.0
YHH3_k127_11567155_1 Haem-binding uptake, Tiki superfamily, ChaN - - - 9.824e-240 777.0
YHH3_k127_11567155_2 Putative ATP-binding cassette K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 537.0
YHH3_k127_11567155_3 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 488.0
YHH3_k127_11567155_4 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008483 363.0
YHH3_k127_11567155_5 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 332.0
YHH3_k127_11567155_6 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003186 264.0
YHH3_k127_11567155_7 PFAM transglutaminase domain protein - - - 0.0000000000000000000000000000000000000000000000006889 180.0
YHH3_k127_11567155_8 extracellular matrix structural constituent - - - 0.000000000000000000000000000000000000005782 147.0
YHH3_k127_1160461_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 519.0
YHH3_k127_1160461_1 PFAM SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000002318 239.0
YHH3_k127_11727991_0 HD domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 427.0
YHH3_k127_11727991_1 Hep Hag repeat protein - - - 0.000000000000000000000000000000000002567 145.0
YHH3_k127_11727991_2 - - - - 0.0000000000000004596 91.0
YHH3_k127_11727991_3 Protein conserved in bacteria K09908 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0071944 - 0.00003896 54.0
YHH3_k127_11762502_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 2.969e-301 936.0
YHH3_k127_11762502_1 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000498 385.0
YHH3_k127_11762502_2 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000001971 187.0
YHH3_k127_1177585_0 TIGRFAM carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.0 1133.0
YHH3_k127_1177585_1 ribonuclease Rne Rng family K08300,K08301 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000428 573.0
YHH3_k127_1177585_2 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007049 502.0
YHH3_k127_1177585_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005013 486.0
YHH3_k127_1177585_4 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 445.0
YHH3_k127_1177585_5 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005615 325.0
YHH3_k127_1177585_6 sporulation resulting in formation of a cellular spore K01449 - 3.5.1.28 0.0000000000000000000000000000000000000000000002367 169.0
YHH3_k127_1180555_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K11383 - 2.7.13.3 4.45e-227 712.0
YHH3_k127_1180555_1 PFAM Cation transporter K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837 522.0
YHH3_k127_1180555_2 PFAM TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004145 345.0
YHH3_k127_1180555_3 - - - - 0.000000000008716 68.0
YHH3_k127_11848748_0 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 564.0
YHH3_k127_11848748_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 377.0
YHH3_k127_11848748_2 DNA methylAse - - - 0.000000008964 59.0
YHH3_k127_11876369_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1244.0
YHH3_k127_11876369_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1034.0
YHH3_k127_11876369_2 Phospholipase, patatin family K07001 - - 2.717e-221 694.0
YHH3_k127_1188030_0 Domain of unknown function (DUF4113) K02346,K03502 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004599 460.0
YHH3_k127_1188030_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 439.0
YHH3_k127_1188030_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005382 374.0
YHH3_k127_1188030_3 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 325.0
YHH3_k127_1188030_4 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001187 297.0
YHH3_k127_1188030_5 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005742 276.0
YHH3_k127_1188030_6 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000001753 222.0
YHH3_k127_1188030_7 Belongs to the peptidase S24 family K03503 - - 0.000000000000000000000000000000000000000000000000000000002183 203.0
YHH3_k127_1188030_8 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000008916 218.0
YHH3_k127_1188030_9 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.00000000000000000000001111 103.0
YHH3_k127_11992717_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 6.744e-241 752.0
YHH3_k127_11992717_1 ArgK protein K07588 - - 0.0000000000000000000000000000000000000000000004154 171.0
YHH3_k127_12011874_0 5'-nucleotidase, C-terminal domain K01081 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004489 527.0
YHH3_k127_12011874_1 PEP-utilising enzyme, mobile domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008356 530.0
YHH3_k127_12011874_2 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000004394 218.0
YHH3_k127_12011874_3 Uncharacterised ACR, YagE family COG1723 - - - 0.0000000000000000000000000000000000000000000000000000003044 204.0
YHH3_k127_12011874_4 DsrE/DsrF-like family - - - 0.0000000000000000000000000000000000000002834 155.0
YHH3_k127_12011874_5 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000172 120.0
YHH3_k127_12026171_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 6.809e-217 679.0
YHH3_k127_12026171_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 589.0
YHH3_k127_12026171_10 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 295.0
YHH3_k127_12026171_11 GGDEF domain K03413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009494 261.0
YHH3_k127_12026171_12 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000001005 147.0
YHH3_k127_12026171_2 Domain of unknown function (DUF3333) K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000921 586.0
YHH3_k127_12026171_3 histidine kinase HAMP region domain protein K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 559.0
YHH3_k127_12026171_4 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 451.0
YHH3_k127_12026171_5 TIGRFAM polyphosphate kinase 2, PA0141 family K22468 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007176 424.0
YHH3_k127_12026171_6 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 397.0
YHH3_k127_12026171_7 phosphate transporter K03306 GO:0003674,GO:0005215,GO:0005315,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0015291,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000994 386.0
YHH3_k127_12026171_8 PFAM response regulator receiver K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004205 323.0
YHH3_k127_12026171_9 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003845 313.0
YHH3_k127_12064215_0 Beta-Casp domain K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008674 333.0
YHH3_k127_12064215_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001283 265.0
YHH3_k127_12064215_2 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000002706 217.0
YHH3_k127_12074157_0 Belongs to the beta-ketoacyl-ACP synthases family K00647,K09458 - 2.3.1.179,2.3.1.41 4.1e-259 819.0
YHH3_k127_12074157_1 Elongator protein 3, MiaB family, Radical SAM - - - 9.48e-238 742.0
YHH3_k127_12074157_10 dehydratase - - - 0.00000000000000000000000000000000000000000000000009398 181.0
YHH3_k127_12074157_11 - - - - 0.000000000000000000000000000000000000002526 155.0
YHH3_k127_12074157_12 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000000001452 145.0
YHH3_k127_12074157_13 FabA-like domain - - - 0.00000000000000000000000000000004829 128.0
YHH3_k127_12074157_14 acyl carrier protein K02078 - - 0.0000000000000000000000000000009749 123.0
YHH3_k127_12074157_15 Dihydroxyacetone kinase family K07030 - - 0.000000000000000000001093 98.0
YHH3_k127_12074157_2 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 595.0
YHH3_k127_12074157_3 PFAM Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 569.0
YHH3_k127_12074157_4 AMP-binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 436.0
YHH3_k127_12074157_5 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008612 369.0
YHH3_k127_12074157_6 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002302 304.0
YHH3_k127_12074157_7 Peptidase family U32 - - - 0.00000000000000000000000000000000000000000000000000000000000000008512 237.0
YHH3_k127_12074157_8 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000001656 204.0
YHH3_k127_12074157_9 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000000000000000000000000000000001534 196.0
YHH3_k127_12091229_0 Domains REC, sigma54 interaction, HTH8 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 552.0
YHH3_k127_12091229_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 353.0
YHH3_k127_12091229_2 TPR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002774 340.0
YHH3_k127_12091229_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K14986 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 325.0
YHH3_k127_12091229_4 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004648 283.0
YHH3_k127_12091229_5 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000005515 200.0
YHH3_k127_12102937_0 AcrB/AcrD/AcrF family - - - 0.0 1585.0
YHH3_k127_12102937_1 TIGRFAM DNA topoisomerase III, bacteria and conjugative plasmid K03169 - 5.99.1.2 0.0 1183.0
YHH3_k127_12102937_10 - - - - 0.0000000000000000000000000000000000000006141 164.0
YHH3_k127_12102937_11 Methyltransferase domain - - - 0.00000000000000000000000000000000002784 146.0
YHH3_k127_12102937_12 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000000000000009167 118.0
YHH3_k127_12102937_13 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000000135 95.0
YHH3_k127_12102937_2 TIGRFAM Threonine synthase K01733 - 4.2.3.1 1.091e-207 655.0
YHH3_k127_12102937_3 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000643 608.0
YHH3_k127_12102937_4 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 603.0
YHH3_k127_12102937_5 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 386.0
YHH3_k127_12102937_6 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 346.0
YHH3_k127_12102937_7 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000002432 233.0
YHH3_k127_12102937_8 thiolester hydrolase activity K01563 - 3.8.1.5 0.00000000000000000000000000000000000000000000000000000000000006951 221.0
YHH3_k127_12102937_9 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000000000000000000001857 175.0
YHH3_k127_1211136_0 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 516.0
YHH3_k127_1211136_1 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 469.0
YHH3_k127_1211136_2 cellulose binding K01179,K21449 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005312 378.0
YHH3_k127_1211136_3 - - - - 0.00000000000000000000000000000000000000000000000005482 181.0
YHH3_k127_1211136_4 domain, Protein - - - 0.0000000000000000000000000000000000000000000008372 173.0
YHH3_k127_1211136_5 Prophage CP4-57 regulatory protein (AlpA) - - - 0.000000000000000000000005856 102.0
YHH3_k127_1211136_7 TIR domain - - - 0.0000003597 53.0
YHH3_k127_1213007_0 poly-beta-hydroxybutyrate polymerase K03821 - - 0.00000000000000000000000000001132 136.0
YHH3_k127_1217990_0 regulation of response to stimulus K01126,K21449 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000001403 299.0
YHH3_k127_1217990_1 domain, Protein - - - 0.00000000000000001106 96.0
YHH3_k127_12222387_0 molybdenum-iron protein alpha chain K02586 - 1.18.6.1 2.607e-315 970.0
YHH3_k127_12222387_1 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 7.003e-260 804.0
YHH3_k127_12222387_10 Belongs to the alpha-IPM synthase homocitrate synthase family K01649,K02594 - 2.3.3.13,2.3.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002719 302.0
YHH3_k127_12222387_11 PFAM Rubrerythrin - GO:0003674,GO:0005488,GO:0005506,GO:0043167,GO:0043169,GO:0046872,GO:0046914 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 286.0
YHH3_k127_12222387_12 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009938 286.0
YHH3_k127_12222387_13 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002917 269.0
YHH3_k127_12222387_14 Belongs to the Fur family K03711,K09825 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000802 269.0
YHH3_k127_12222387_15 Desulfoferrodoxin ferrous iron-binding K05919 - 1.15.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000009546 240.0
YHH3_k127_12222387_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000004493 232.0
YHH3_k127_12222387_17 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000000000000000000000000000000664 231.0
YHH3_k127_12222387_18 Belongs to the P(II) protein family K02590 - - 0.00000000000000000000000000000000000000000000000000000000000002104 217.0
YHH3_k127_12222387_19 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000000000000001885 209.0
YHH3_k127_12222387_2 PFAM Metallo-beta-lactamase superfamily K22405 - 1.6.3.4 2.321e-209 659.0
YHH3_k127_12222387_20 Ferredoxin - - - 0.000000000000000000000000000000000000000000000000000007948 192.0
YHH3_k127_12222387_21 Belongs to the P(II) protein family K02589 - - 0.00000000000000000000000000000000000000000000000000003931 189.0
YHH3_k127_12222387_22 amino acid transport K02030 - - 0.000000000000000000000000000000000000000000000005693 181.0
YHH3_k127_12222387_23 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000001979 166.0
YHH3_k127_12222387_24 - - - - 0.000000000000000000000000000000000000000001161 161.0
YHH3_k127_12222387_25 PFAM Rubredoxin-type Fe(Cys)4 protein - - - 0.0000000000000000000000002449 105.0
YHH3_k127_12222387_3 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 5.472e-208 659.0
YHH3_k127_12222387_4 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000806 565.0
YHH3_k127_12222387_5 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 518.0
YHH3_k127_12222387_6 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 392.0
YHH3_k127_12222387_7 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 388.0
YHH3_k127_12222387_8 PFAM Dinitrogenase iron-molybdenum cofactor biosynthesis K02585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005109 348.0
YHH3_k127_12222387_9 Protein of unknown function (DUF3750) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 316.0
YHH3_k127_12236622_0 reductase, alpha subunit K00394 - 1.8.99.2 0.0 1289.0
YHH3_k127_12236622_1 Methyl-viologen-reducing hydrogenase, delta subunit K16886 - - 0.0 1260.0
YHH3_k127_12236622_10 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 550.0
YHH3_k127_12236622_11 lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003214 483.0
YHH3_k127_12236622_12 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 473.0
YHH3_k127_12236622_13 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 455.0
YHH3_k127_12236622_14 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 456.0
YHH3_k127_12236622_15 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004479 436.0
YHH3_k127_12236622_16 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 386.0
YHH3_k127_12236622_17 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 360.0
YHH3_k127_12236622_18 TIGRFAM riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000504 312.0
YHH3_k127_12236622_19 Cell shape determining protein MreB Mrl K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 315.0
YHH3_k127_12236622_2 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1117.0
YHH3_k127_12236622_20 reductase, beta subunit K00395 - 1.8.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 292.0
YHH3_k127_12236622_21 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 293.0
YHH3_k127_12236622_22 PFAM Tetratricopeptide - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 284.0
YHH3_k127_12236622_24 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000000000000000004249 258.0
YHH3_k127_12236622_25 'Cold-shock' DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001255 251.0
YHH3_k127_12236622_26 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000006396 221.0
YHH3_k127_12236622_27 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000653 201.0
YHH3_k127_12236622_29 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000004407 181.0
YHH3_k127_12236622_3 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 3.778e-293 912.0
YHH3_k127_12236622_30 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000272 156.0
YHH3_k127_12236622_31 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000001695 87.0
YHH3_k127_12236622_32 - - - - 0.0000000009625 63.0
YHH3_k127_12236622_33 - - - - 0.00000000466 61.0
YHH3_k127_12236622_34 PFAM Type IV pilus assembly PilZ - - - 0.00000001619 61.0
YHH3_k127_12236622_35 Serine threonine protein kinase - - - 0.00000002662 59.0
YHH3_k127_12236622_4 DNA segregation ATPase, FtsK SpoIIIE family K03466 - - 1.191e-231 737.0
YHH3_k127_12236622_5 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 5.997e-223 696.0
YHH3_k127_12236622_6 FAD dependent oxidoreductase K16885 - - 7.399e-221 691.0
YHH3_k127_12236622_7 Belongs to the citrate synthase family K01647 - 2.3.3.1 5.585e-220 689.0
YHH3_k127_12236622_8 4Fe-4S dicluster domain K16887 - - 1.276e-206 648.0
YHH3_k127_12236622_9 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 2.17e-198 621.0
YHH3_k127_12237791_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.581e-231 730.0
YHH3_k127_12237791_1 PFAM Polysulphide reductase, NrfD K00185 - - 1.01e-205 646.0
YHH3_k127_12237791_10 ribonucleoside-diphosphate reductase activity K00525,K00526 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000277 215.0
YHH3_k127_12237791_11 helix_turn_helix, mercury resistance K13640 - - 0.00000000000000000000000000000000000000000000000000000000001674 210.0
YHH3_k127_12237791_12 PFAM nuclease (SNase - - - 0.000000000000000000000000000000000003378 143.0
YHH3_k127_12237791_13 Specifically methylates the guanosine in position 1516 of 16S rRNA K15984 - 2.1.1.242 0.00000003916 61.0
YHH3_k127_12237791_2 Bacterial regulatory protein, Fis family - - - 1.508e-198 634.0
YHH3_k127_12237791_3 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 507.0
YHH3_k127_12237791_4 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004337 471.0
YHH3_k127_12237791_5 PFAM 4Fe-4S dicluster domain K04014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 426.0
YHH3_k127_12237791_6 PFAM Cytochrome c, bacterial - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 353.0
YHH3_k127_12237791_7 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000000000006729 235.0
YHH3_k127_12237791_8 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000007445 226.0
YHH3_k127_12237791_9 helix_turn_helix, mercury resistance K13640 - - 0.00000000000000000000000000000000000000000000000000000000000005231 218.0
YHH3_k127_12268515_0 Cytochrome c554 and c-prime - - - 1.258e-234 733.0
YHH3_k127_12268515_1 - - - - 4.653e-225 705.0
YHH3_k127_12268515_10 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000002848 197.0
YHH3_k127_12268515_11 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000000000000000000927 149.0
YHH3_k127_12268515_12 - - - - 0.00000000000000000000000000000000000005101 145.0
YHH3_k127_12268515_13 S4 domain K14761 - - 0.0000000000000000002604 92.0
YHH3_k127_12268515_2 Sulfatase K01002 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006490,GO:0006629,GO:0008150,GO:0008152,GO:0008960,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0042597,GO:0044237,GO:0044238,GO:0044255,GO:0044464,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901576 2.7.8.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003829 535.0
YHH3_k127_12268515_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006988 516.0
YHH3_k127_12268515_4 aminotransferase class V K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 483.0
YHH3_k127_12268515_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 479.0
YHH3_k127_12268515_6 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 356.0
YHH3_k127_12268515_7 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004974 345.0
YHH3_k127_12268515_8 ABC transporter, periplasmic molybdate-binding protein K02020 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0030973,GO:0031975,GO:0042597,GO:0043167,GO:0043168,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000001103 216.0
YHH3_k127_12268515_9 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000000000000000006346 200.0
YHH3_k127_12270771_0 Belongs to the PEP-utilizing enzyme family K01007 - 2.7.9.2 5.655e-295 929.0
YHH3_k127_12270771_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 - 1.4.1.4 1.935e-214 674.0
YHH3_k127_12270771_10 - - - - 0.0000000000000000000002068 104.0
YHH3_k127_12270771_2 Beta-lactamase superfamily domain K00784 - 3.1.26.11 3.229e-201 646.0
YHH3_k127_12270771_3 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004987 556.0
YHH3_k127_12270771_4 PFAM membrane bound O-acyl transferase MBOAT family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 521.0
YHH3_k127_12270771_5 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000587 295.0
YHH3_k127_12270771_6 Domain of unknown function (DUF3482) - - - 0.000000000000000000000000000000000000003922 151.0
YHH3_k127_12270771_7 - - - - 0.000000000000000000000000000000000000143 155.0
YHH3_k127_12270771_9 - - - - 0.00000000000000000000000000001067 119.0
YHH3_k127_12315770_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 3.054e-253 790.0
YHH3_k127_12315770_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000326 565.0
YHH3_k127_12315770_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007585 379.0
YHH3_k127_12315770_3 Uncharacterised 5xTM membrane BCR, YitT family COG1284 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 349.0
YHH3_k127_12315770_4 PFAM Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001802 280.0
YHH3_k127_12315770_5 NlpC/P60 family K13695,K19303 - - 0.000000000000000000000000000000000000000000006665 169.0
YHH3_k127_12315770_6 TIGRFAM siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000000001281 165.0
YHH3_k127_12325430_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 456.0
YHH3_k127_12325430_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005023 308.0
YHH3_k127_12325430_2 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 297.0
YHH3_k127_12325430_3 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.0000000000000000000000000000000000000000000000004793 185.0
YHH3_k127_12325430_4 Tetratricopeptide repeat-like domain - - - 0.000000000000000000000000000000001529 138.0
YHH3_k127_12343578_0 Transketolase K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004318 350.0
YHH3_k127_12343578_1 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005215 267.0
YHH3_k127_12343578_2 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000002259 226.0
YHH3_k127_12384107_0 Required for morphogenesis under gluconeogenic growth conditions - - - 8.209e-246 781.0
YHH3_k127_12384107_1 ABC transporter transmembrane region K06147,K18890 - - 4.419e-203 649.0
YHH3_k127_12384107_10 DnaJ molecular chaperone homology domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008854 290.0
YHH3_k127_12384107_12 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009815 269.0
YHH3_k127_12384107_13 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000006076 238.0
YHH3_k127_12384107_14 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000006274 186.0
YHH3_k127_12384107_15 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000001074 177.0
YHH3_k127_12384107_16 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000000000000000000000000000000114 164.0
YHH3_k127_12384107_17 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000008359 152.0
YHH3_k127_12384107_18 Rubredoxin - - - 0.00000000000000000000001076 102.0
YHH3_k127_12384107_2 ABC transporter transmembrane region K06147,K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 619.0
YHH3_k127_12384107_3 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004987 507.0
YHH3_k127_12384107_4 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 486.0
YHH3_k127_12384107_5 ABC-type transport system involved in lipoprotein release permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 429.0
YHH3_k127_12384107_6 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005167 398.0
YHH3_k127_12384107_7 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004412 344.0
YHH3_k127_12384107_8 non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 291.0
YHH3_k127_12384107_9 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006151 289.0
YHH3_k127_12451775_0 TIGRFAM aminopeptidase N K01256,K08776 - 3.4.11.2 0.0 1034.0
YHH3_k127_12451775_1 Belongs to the peptidase M16 family K07263 - - 1.2e-299 947.0
YHH3_k127_12451775_10 Helix-hairpin-helix motif K02237 - - 0.0004252 49.0
YHH3_k127_12451775_2 PFAM surface antigen (D15) K07277,K07278 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 557.0
YHH3_k127_12451775_3 protein conserved in bacteria K09800 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032940,GO:0032991,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0097347 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000732 450.0
YHH3_k127_12451775_4 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005477 409.0
YHH3_k127_12451775_5 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 317.0
YHH3_k127_12451775_6 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00366,K05934,K21479 - 1.7.7.1,2.1.1.131,2.1.1.272 0.00000000000000000000000000000000000000000000000000000000001016 214.0
YHH3_k127_12451775_7 PFAM ResB family protein K07399 - - 0.0000000000000000000000000000000000000000001281 165.0
YHH3_k127_12451775_8 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000005393 116.0
YHH3_k127_12472916_0 G-rich domain on putative tyrosine kinase K16554 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 559.0
YHH3_k127_12472916_1 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 361.0
YHH3_k127_12472916_2 PFAM Polysaccharide export protein K01991 - - 0.000000000000000000000000000000000000000000000000000000000000000128 235.0
YHH3_k127_12472916_3 PFAM O-Antigen K18814 - - 0.00000000000000000000000000000000000000000000002114 188.0
YHH3_k127_12472916_4 PFAM S23 ribosomal protein - - - 0.000000000000000000000000000000000000000003578 158.0
YHH3_k127_12472916_5 pfam php K01104 - 3.1.3.48 0.00000000000000000000000000000000001329 147.0
YHH3_k127_12472916_6 Tetratricopeptide repeat - - - 0.00000000000000000000000000002527 133.0
YHH3_k127_12472916_7 - - - - 0.00000000000000000001121 102.0
YHH3_k127_12472916_8 DnaJ molecular chaperone homology domain K03686 - - 0.00000004214 66.0
YHH3_k127_12555713_0 TIGRFAM ATP-dependent helicase HrpA K03578,K03579 - 3.6.4.13 1.664e-223 708.0
YHH3_k127_12555713_1 ATP-dependent helicase hrpA K03578 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000003585 224.0
YHH3_k127_12555713_2 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000001024 53.0
YHH3_k127_12559315_0 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 1.497e-234 734.0
YHH3_k127_12559315_1 Domain of unknown function (DUF3488) K22452 - 2.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005911 540.0
YHH3_k127_12559315_2 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 412.0
YHH3_k127_12559315_3 TrkA-N domain K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006274 348.0
YHH3_k127_12559315_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K21137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005521 278.0
YHH3_k127_12559315_5 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000001702 211.0
YHH3_k127_12559315_6 PIN domain - - - 0.00000000000000000000000000000000000000001153 157.0
YHH3_k127_12559315_7 positive regulation of growth - - - 0.000000000000000000001561 95.0
YHH3_k127_12560492_0 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 404.0
YHH3_k127_12560492_1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.0000000000000000000006427 98.0
YHH3_k127_1269283_0 Heavy metal transport detoxification protein K17686 - 3.6.3.54 5.329e-309 967.0
YHH3_k127_1269283_1 Tfp pilus assembly protein tip-associated adhesin K02674 - - 2.208e-252 862.0
YHH3_k127_1269283_10 PilX N-terminal - - - 0.000000000000000000000000000000000621 139.0
YHH3_k127_1269283_11 PFAM SpoVT AbrB like domain - - - 0.00000000000000000000000004665 109.0
YHH3_k127_1269283_12 Tetratricopeptide repeat - - - 0.0000000000000000001218 92.0
YHH3_k127_1269283_13 - - - - 0.00000000000000002025 83.0
YHH3_k127_1269283_14 type IV pilus modification protein PilV K02671 - - 0.0000000000000001092 87.0
YHH3_k127_1269283_15 Prokaryotic N-terminal methylation motif K08084 - - 0.000000000006591 74.0
YHH3_k127_1269283_16 COG4968 Tfp pilus assembly protein PilE K02655 - - 0.00000000001575 70.0
YHH3_k127_1269283_17 Type IV minor pilin ComP, DNA uptake sequence receptor K02650 - - 0.000000008847 63.0
YHH3_k127_1269283_18 23S rRNA-intervening sequence protein - - - 0.0000004719 53.0
YHH3_k127_1269283_2 sulfate adenylyltransferase K00958,K13811 - 2.7.1.25,2.7.7.4 9.847e-228 710.0
YHH3_k127_1269283_3 AAA domain K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 561.0
YHH3_k127_1269283_4 Sigma-54 interaction domain K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005724 539.0
YHH3_k127_1269283_5 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 470.0
YHH3_k127_1269283_6 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000946 332.0
YHH3_k127_1269283_7 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.000000000000000000000000000000000000000000002265 166.0
YHH3_k127_1269283_8 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.000000000000000000000000000000000003171 138.0
YHH3_k127_1269283_9 pilus assembly protein PilW - - - 0.0000000000000000000000000000000002704 140.0
YHH3_k127_12704217_0 Bacterial extracellular solute-binding proteins, family 5 Middle K13893 - - 7.885e-260 815.0
YHH3_k127_12704217_1 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 1.115e-244 767.0
YHH3_k127_12704217_10 Signal transducing histidine kinase, homodimeric K02487,K06596 - - 3.134e-206 672.0
YHH3_k127_12704217_11 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K11779,K11784,K18285 - 1.21.98.1,2.5.1.120,2.5.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005362 602.0
YHH3_k127_12704217_12 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 590.0
YHH3_k127_12704217_13 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 603.0
YHH3_k127_12704217_14 Electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 541.0
YHH3_k127_12704217_15 radical SAM domain protein K03716 - 4.1.99.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 498.0
YHH3_k127_12704217_16 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 440.0
YHH3_k127_12704217_17 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007302 436.0
YHH3_k127_12704217_18 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006541 431.0
YHH3_k127_12704217_19 heat shock protein DnaJ domain protein K03686,K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 413.0
YHH3_k127_12704217_2 Belongs to the TPP enzyme family K01652 - 2.2.1.6 2.308e-235 739.0
YHH3_k127_12704217_20 PFAM Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000511 410.0
YHH3_k127_12704217_21 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008642 405.0
YHH3_k127_12704217_22 TIGRFAM lipopolysaccharide heptosyltransferase II K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 402.0
YHH3_k127_12704217_23 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 400.0
YHH3_k127_12704217_24 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 370.0
YHH3_k127_12704217_25 PFAM ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 338.0
YHH3_k127_12704217_26 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007163 321.0
YHH3_k127_12704217_27 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 303.0
YHH3_k127_12704217_28 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 301.0
YHH3_k127_12704217_29 PFAM VacJ family lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009009 297.0
YHH3_k127_12704217_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.435e-229 718.0
YHH3_k127_12704217_30 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 287.0
YHH3_k127_12704217_31 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 283.0
YHH3_k127_12704217_32 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000193 289.0
YHH3_k127_12704217_33 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005098 255.0
YHH3_k127_12704217_34 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000006288 244.0
YHH3_k127_12704217_35 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.00000000000000000000000000000000000000000000000000000000000000008728 247.0
YHH3_k127_12704217_36 Single-stranded DNA-binding protein K03111 - - 0.000000000000000000000000000000000000000000000000000000000000002394 219.0
YHH3_k127_12704217_37 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000001188 207.0
YHH3_k127_12704217_38 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000001719 202.0
YHH3_k127_12704217_39 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000001312 202.0
YHH3_k127_12704217_4 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 8.852e-219 696.0
YHH3_k127_12704217_40 PFAM Mammalian cell entry related domain protein K02067 - - 0.00000000000000000000000000000000000000000000000000000004459 199.0
YHH3_k127_12704217_41 Domain of unknown function (DUF4388) - - - 0.0000000000000000000000000000000000000000000000000004168 192.0
YHH3_k127_12704217_42 PFAM toluene tolerance family protein K07323 - - 0.00000000000000000000000000000000000000000000001351 179.0
YHH3_k127_12704217_43 PFAM Ferredoxin thioredoxin reductase catalytic beta chain - - - 0.000000000000000000000000000000000000000000001533 166.0
YHH3_k127_12704217_44 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.000000000000000000000000000000000000000000001909 171.0
YHH3_k127_12704217_45 Methyl-accepting chemotaxis protein (MCP) signaling domain K02660,K03406 - - 0.00000000000000000000000000000000000000006452 172.0
YHH3_k127_12704217_46 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000000000000000000000000724 157.0
YHH3_k127_12704217_47 phosphorelay signal transduction system K13599 - - 0.0000000000000000000000000000000000001104 149.0
YHH3_k127_12704217_48 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000000000000000000000002785 147.0
YHH3_k127_12704217_49 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000002847 145.0
YHH3_k127_12704217_5 PFAM Acyl-CoA dehydrogenase K00248 - 1.3.8.1 4.584e-215 671.0
YHH3_k127_12704217_50 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000000000000000001735 130.0
YHH3_k127_12704217_53 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.00000000000000000000000000001549 132.0
YHH3_k127_12704217_54 PFAM response regulator receiver K03413 - - 0.0000000000000000000000000001294 119.0
YHH3_k127_12704217_55 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000001484 115.0
YHH3_k127_12704217_56 Two component signalling adaptor domain - - - 0.000000000000000000000000002337 118.0
YHH3_k127_12704217_57 MarR family transcriptional K15973 - - 0.00000000000000000000000001089 115.0
YHH3_k127_12704217_58 PFAM Type IV pilus assembly PilZ - - - 0.00000000000000000000008042 102.0
YHH3_k127_12704217_59 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000000003354 97.0
YHH3_k127_12704217_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 5.335e-215 674.0
YHH3_k127_12704217_60 protein conserved in bacteria - - - 0.0000000000000000000005793 100.0
YHH3_k127_12704217_61 PFAM Glutaredoxin K06191 - - 0.0000000000000000006021 89.0
YHH3_k127_12704217_62 PFAM Late competence development protein ComFB - - - 0.000000000000000001214 89.0
YHH3_k127_12704217_63 chemotaxis protein K03407 - 2.7.13.3 0.00000000000000001415 96.0
YHH3_k127_12704217_65 TIGRFAM Phosphotransferase System HPr (HPr) Family K02784,K11189 - - 0.0000001925 59.0
YHH3_k127_12704217_66 - - - - 0.0002146 48.0
YHH3_k127_12704217_7 Protein of unknown function (DUF2867) - - - 3.119e-214 674.0
YHH3_k127_12704217_8 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 5.841e-210 658.0
YHH3_k127_12704217_9 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 2.291e-206 647.0
YHH3_k127_1270710_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 2.327e-305 970.0
YHH3_k127_1270710_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006743 583.0
YHH3_k127_1270710_2 Bacterial regulatory protein, Fis family K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 569.0
YHH3_k127_1270710_3 diguanylate cyclase K13246 - 3.1.4.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 566.0
YHH3_k127_1270710_4 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 449.0
YHH3_k127_1270710_5 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 413.0
YHH3_k127_1270710_6 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.0000000000000000000000000000000000000000000000000001508 193.0
YHH3_k127_1270710_7 histidine kinase HAMP region domain protein K02482 - 2.7.13.3 0.0000000000000000000004906 97.0
YHH3_k127_12709097_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 351.0
YHH3_k127_12709097_1 PFAM MOSC domain - - - 0.00000000000000000000000000000000000000000000000000000000002287 208.0
YHH3_k127_12709097_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000004123 172.0
YHH3_k127_12709097_3 PFAM ABC transporter related K02065 - - 0.0000000000000000001509 92.0
YHH3_k127_12712035_0 transferase activity, transferring glycosyl groups K13693,K21349 - 2.4.1.266,2.4.1.268 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003203 538.0
YHH3_k127_12712035_1 PFAM MOFRL family K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 494.0
YHH3_k127_12712035_10 Diguanylate cyclase with GAF sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002754 265.0
YHH3_k127_12712035_11 mannosylglycerate metabolic process K05947,K07026,K15918 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050897 2.4.1.217,2.7.1.31,3.1.3.70 0.0000000000000000000000000000000000000000000000000000000000000000001153 239.0
YHH3_k127_12712035_12 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000001947 237.0
YHH3_k127_12712035_13 peptidase activity, acting on L-amino acid peptides K01337,K20276 - 3.4.21.50 0.000000000000000000000000000000000000000000000000000000000000000000748 253.0
YHH3_k127_12712035_14 Protein of unknown function, DUF480 K09915 - - 0.000000000000000000000000000000000000000000000000000000001318 207.0
YHH3_k127_12712035_15 PFAM Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000005445 204.0
YHH3_k127_12712035_16 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03972 - - 0.00000000000000000000000000000000000000000000000111 182.0
YHH3_k127_12712035_17 Domain of unknown function (DUF1992) - - - 0.00000000000000000000000000000000000000000000000284 180.0
YHH3_k127_12712035_18 - K07020,K18614 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009111,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0017144,GO:0034641,GO:0042365,GO:0042737,GO:0042802,GO:0042803,GO:0042816,GO:0042820,GO:0044237,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046483,GO:0046700,GO:0046983,GO:0047411,GO:0071704,GO:0072524,GO:0072526,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 3.5.1.29 0.0000000000000000000000000000000000000000002507 163.0
YHH3_k127_12712035_19 thioredoxin peroxidase activity K11065 - 1.11.1.15 0.000000000000000000000000000000000000002141 156.0
YHH3_k127_12712035_2 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 478.0
YHH3_k127_12712035_20 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.0000000000000000000000000000000000005311 143.0
YHH3_k127_12712035_21 CO dehydrogenase/acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 0.000000000000000000000000000000003131 133.0
YHH3_k127_12712035_22 4Fe-4S binding domain - - - 0.00000000000000000000000000004621 118.0
YHH3_k127_12712035_23 - - - - 0.0000000000000000000409 95.0
YHH3_k127_12712035_24 Plasmid stability protein K21495 - - 0.0000000000000002721 81.0
YHH3_k127_12712035_25 Glucose / Sorbosone dehydrogenase - - - 0.0005265 51.0
YHH3_k127_12712035_3 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 445.0
YHH3_k127_12712035_4 Mechanosensitive ion channel K22044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005702 437.0
YHH3_k127_12712035_5 PFAM Hemerythrin HHE cation binding domain K09155 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006323 407.0
YHH3_k127_12712035_6 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 355.0
YHH3_k127_12712035_7 Glycosyl transferase K13693 - 2.4.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 335.0
YHH3_k127_12712035_8 thiosulfate sulfurtransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004459 323.0
YHH3_k127_12712035_9 Transposase IS200 like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004132 283.0
YHH3_k127_12729132_0 Glycogen debranching enzyme - - - 6.769e-233 724.0
YHH3_k127_12729132_1 Alpha amylase, catalytic domain - - - 3.797e-228 715.0
YHH3_k127_12829232_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2342.0
YHH3_k127_12829232_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2233.0
YHH3_k127_12829232_10 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000000000000002416 93.0
YHH3_k127_12829232_11 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000003204 91.0
YHH3_k127_12829232_12 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000002319 87.0
YHH3_k127_12829232_13 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000003667 78.0
YHH3_k127_12829232_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1043.0
YHH3_k127_12829232_3 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 372.0
YHH3_k127_12829232_4 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 284.0
YHH3_k127_12829232_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007283 271.0
YHH3_k127_12829232_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000006308 250.0
YHH3_k127_12829232_7 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000000002781 227.0
YHH3_k127_12829232_8 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000001837 210.0
YHH3_k127_12829232_9 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000002434 183.0
YHH3_k127_12830559_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 2.537e-308 959.0
YHH3_k127_12830559_1 Aminoacyl-tRNA editing domain K01881 - 6.1.1.15 8.295e-263 821.0
YHH3_k127_12830559_10 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007386 499.0
YHH3_k127_12830559_11 permease YjgP YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005041 482.0
YHH3_k127_12830559_12 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 471.0
YHH3_k127_12830559_13 SMART PDZ DHR GLGF domain protein K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 432.0
YHH3_k127_12830559_14 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009283 389.0
YHH3_k127_12830559_15 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009885 387.0
YHH3_k127_12830559_16 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 368.0
YHH3_k127_12830559_17 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009786 349.0
YHH3_k127_12830559_18 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005021 331.0
YHH3_k127_12830559_19 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003581 323.0
YHH3_k127_12830559_2 Ion transport 2 domain protein - - - 3.035e-231 730.0
YHH3_k127_12830559_20 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004216 327.0
YHH3_k127_12830559_21 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005017 327.0
YHH3_k127_12830559_22 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 322.0
YHH3_k127_12830559_23 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 321.0
YHH3_k127_12830559_24 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 312.0
YHH3_k127_12830559_25 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 307.0
YHH3_k127_12830559_26 4 iron, 4 sulfur cluster binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008856 303.0
YHH3_k127_12830559_27 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 296.0
YHH3_k127_12830559_28 overlaps another CDS with the same product name K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000506 294.0
YHH3_k127_12830559_29 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 291.0
YHH3_k127_12830559_3 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.415e-227 710.0
YHH3_k127_12830559_30 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004903 287.0
YHH3_k127_12830559_31 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000217 280.0
YHH3_k127_12830559_32 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001943 268.0
YHH3_k127_12830559_33 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K01802,K03772,K03773 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000001428 250.0
YHH3_k127_12830559_34 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000005325 226.0
YHH3_k127_12830559_35 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000004444 218.0
YHH3_k127_12830559_36 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000001274 217.0
YHH3_k127_12830559_37 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000004257 213.0
YHH3_k127_12830559_38 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000028 215.0
YHH3_k127_12830559_39 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000001843 201.0
YHH3_k127_12830559_4 Glucose-1-phosphate adenylyltransferase K00975 - 2.7.7.27 1.386e-220 689.0
YHH3_k127_12830559_40 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000003886 199.0
YHH3_k127_12830559_41 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000004312 196.0
YHH3_k127_12830559_42 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000004831 188.0
YHH3_k127_12830559_43 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000002929 188.0
YHH3_k127_12830559_44 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000004211 188.0
YHH3_k127_12830559_45 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000000005725 172.0
YHH3_k127_12830559_46 PFAM peptidase M22 glycoprotease K01409,K14742 - 2.3.1.234 0.000000000000000000000000000000000000000000000006196 180.0
YHH3_k127_12830559_47 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.00000000000000000000000000000000000000000336 155.0
YHH3_k127_12830559_48 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000005848 151.0
YHH3_k127_12830559_49 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000008092 146.0
YHH3_k127_12830559_5 Belongs to the bacterial plant glucose-1-phosphate adenylyltransferase family K00975,K20427 - 2.7.7.27,2.7.7.91 1.959e-195 617.0
YHH3_k127_12830559_50 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000003371 141.0
YHH3_k127_12830559_51 - - - - 0.000000000000000000000000000000002436 134.0
YHH3_k127_12830559_52 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000001544 115.0
YHH3_k127_12830559_53 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) K02907 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000001698 91.0
YHH3_k127_12830559_54 Belongs to the universal ribosomal protein uL29 family K02904 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000009535 85.0
YHH3_k127_12830559_55 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000003667 78.0
YHH3_k127_12830559_56 Diguanylate cyclase - - - 0.00000000000002366 77.0
YHH3_k127_12830559_57 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000002475 65.0
YHH3_k127_12830559_6 Domain of unknown function (DUF4445) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 594.0
YHH3_k127_12830559_7 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003728 539.0
YHH3_k127_12830559_8 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 542.0
YHH3_k127_12830559_9 PFAM phosphoesterase RecJ domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 535.0
YHH3_k127_12862747_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0 1120.0
YHH3_k127_12862747_1 Belongs to the UbiD family K03182 - 4.1.1.98 1.795e-303 938.0
YHH3_k127_12862747_10 Belongs to the pseudouridine synthase RsuA family K06178,K06182 - 5.4.99.21,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 311.0
YHH3_k127_12862747_11 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 306.0
YHH3_k127_12862747_12 (AIR) carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003265 284.0
YHH3_k127_12862747_13 Metal dependent phosphohydrolases with conserved 'HD' motif. K06950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003269 262.0
YHH3_k127_12862747_14 NIL - - - 0.0000000000000000000000000000000000000000000000000000000000000005933 224.0
YHH3_k127_12862747_15 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000009913 219.0
YHH3_k127_12862747_16 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000005453 213.0
YHH3_k127_12862747_17 Glycine zipper 2TM domain - - - 0.00000000000000000000000000000000000000000000000000000000000347 211.0
YHH3_k127_12862747_18 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000000000007852 203.0
YHH3_k127_12862747_19 TIGRFAM secondary thiamine-phosphate synthase enzyme - - - 0.00000000000000000000000000000000000000000000000007127 185.0
YHH3_k127_12862747_2 PFAM aminotransferase class-III K01845 - 5.4.3.8 3.232e-219 685.0
YHH3_k127_12862747_20 Belongs to the bacterial histone-like protein family K05788 - - 0.00000000000000000000000000000000000000000003547 163.0
YHH3_k127_12862747_21 AAA domain K00851,K07028 GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0009987,GO:0030312,GO:0044464,GO:0044764,GO:0046812,GO:0051704,GO:0071944 2.7.1.12 0.0000000000000000000000000000000000000000000596 166.0
YHH3_k127_12862747_22 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000000000000000000004117 155.0
YHH3_k127_12862747_23 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000004567 118.0
YHH3_k127_12862747_24 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.000000000000000000000000002367 113.0
YHH3_k127_12862747_25 MerR HTH family regulatory protein K18997 - - 0.0000000000000000000000000702 109.0
YHH3_k127_12862747_27 - - - - 0.0000000000000007703 81.0
YHH3_k127_12862747_3 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 571.0
YHH3_k127_12862747_4 DnaJ molecular chaperone homology domain K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002289 454.0
YHH3_k127_12862747_5 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 431.0
YHH3_k127_12862747_6 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 397.0
YHH3_k127_12862747_7 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 369.0
YHH3_k127_12862747_8 RmuC family K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 381.0
YHH3_k127_12862747_9 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 340.0
YHH3_k127_12870963_0 PFAM ribonuclease II K01147,K12573 - 3.1.13.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005579 501.0
YHH3_k127_12870963_1 Na H antiporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049 353.0
YHH3_k127_12870963_2 Na H antiporter - - - 0.00000000000000000000000000000000000000000000000000000000000000003531 226.0
YHH3_k127_12870963_3 - - - - 0.000000000000002892 79.0
YHH3_k127_12870963_4 Na H antiporter - - - 0.00000003771 58.0
YHH3_k127_12871739_0 Fibronectin type III domain - - - 0.00000000000000000000000000000000000000000000001412 198.0
YHH3_k127_1314949_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 339.0
YHH3_k127_1314949_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002455 275.0
YHH3_k127_1314949_2 Necessary for formate dehydrogenase activity K02380 - - 0.000000000000000000000000000000000000000001431 168.0
YHH3_k127_1314949_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000003644 83.0
YHH3_k127_1370252_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006082 478.0
YHH3_k127_1370252_1 Fibronectin type 3 domain K12685,K16785,K16786,K16787 - - 0.0000000000000000000000000000000000000000000000000000000000000000001453 244.0
YHH3_k127_1370252_2 Subtilase family - - - 0.00000000000000000005777 102.0
YHH3_k127_1395093_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1274.0
YHH3_k127_1395093_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 327.0
YHH3_k127_1395093_2 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0001185 49.0
YHH3_k127_14629_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008015 569.0
YHH3_k127_14629_1 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000001052 180.0
YHH3_k127_14629_2 nucleic acid binding OB-fold tRNA helicase-type K03698 - - 0.00000000000000000000000006967 109.0
YHH3_k127_1505039_0 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000002662 196.0
YHH3_k127_1505039_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000001089 132.0
YHH3_k127_1505039_2 Cytochrome c - - - 0.000000000000000000000008476 105.0
YHH3_k127_1505039_3 Cytochrome c - - - 0.000000000000006507 87.0
YHH3_k127_1505039_4 tRNA_anti-like - - - 0.0000003863 57.0
YHH3_k127_1508558_0 Associated with various cellular activities K04748 - - 0.0 1077.0
YHH3_k127_1508558_1 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 1.286e-311 964.0
YHH3_k127_1508558_10 IMP dehydrogenase activity - - - 0.000000000000000000000000000001837 126.0
YHH3_k127_1508558_11 Domain of unknown function (DUF4492) - - - 0.00000000000000000000001111 103.0
YHH3_k127_1508558_12 arsenite transmembrane transporter activity - - - 0.00000000000000000000001911 102.0
YHH3_k127_1508558_13 arsenite transmembrane transporter activity - - - 0.0000000000000002777 80.0
YHH3_k127_1508558_14 elongation factor Tu domain 2 protein K02355 - - 0.00000001487 59.0
YHH3_k127_1508558_15 Citrate transporter - - - 0.00000133 54.0
YHH3_k127_1508558_2 PFAM cytochrome bd ubiquinol oxidase subunit I K00425 - 1.10.3.14 8.527e-232 728.0
YHH3_k127_1508558_3 Cytochrome d ubiquinol oxidase, subunit II K00426 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0016682,GO:0019646,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:1901363 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008313 550.0
YHH3_k127_1508558_4 AIR synthase related protein, N-terminal domain K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 421.0
YHH3_k127_1508558_5 Secreted protein, containing von Willebrand factor (VWF) type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 337.0
YHH3_k127_1508558_6 von Willebrand factor (VWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 325.0
YHH3_k127_1508558_7 MotA/TolQ/ExbB proton channel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000923 303.0
YHH3_k127_1508558_8 TIGRFAM transcriptional regulator, Rrf2 family - - - 0.000000000000000000000000000000000000000000000000000000000005773 214.0
YHH3_k127_1567787_0 synthase K00703 GO:0000271,GO:0003674,GO:0003824,GO:0004373,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 4.485e-196 626.0
YHH3_k127_1567787_1 Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB K02014,K16092 - - 5.657e-194 627.0
YHH3_k127_1567787_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006105 569.0
YHH3_k127_1567787_3 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 312.0
YHH3_k127_1567787_4 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004474 260.0
YHH3_k127_1567787_5 Diphthamide synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001295 245.0
YHH3_k127_1567787_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000005163 224.0
YHH3_k127_1567787_7 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.00000000000000000000000000004622 122.0
YHH3_k127_1578598_0 Sodium/hydrogen exchanger family K11105 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 488.0
YHH3_k127_1578598_1 surface antigen variable number repeat protein K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002812 479.0
YHH3_k127_1578598_2 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000008375 214.0
YHH3_k127_1578598_3 SpoIIAA-like - - - 0.0000000000000000000000001845 111.0
YHH3_k127_1578598_4 Patatin-like phospholipase K07001 - - 0.000000000001948 70.0
YHH3_k127_160401_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 596.0
YHH3_k127_160401_1 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0071704,GO:1901135,GO:1901576 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006646 520.0
YHH3_k127_160401_2 CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006032 392.0
YHH3_k127_160401_3 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004026 351.0
YHH3_k127_160401_4 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002601 270.0
YHH3_k127_160401_5 repeat-containing protein - - - 0.00001112 57.0
YHH3_k127_1621665_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1399.0
YHH3_k127_1621665_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1300.0
YHH3_k127_1621665_10 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 397.0
YHH3_k127_1621665_11 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 382.0
YHH3_k127_1621665_12 N-terminal domain of galactosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 337.0
YHH3_k127_1621665_13 Mechanosensitive ion channel K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004876 332.0
YHH3_k127_1621665_14 PFAM GCN5-related N-acetyltransferase K00619 - 2.3.1.1 0.00000000000000000000000000000000000000000000000000000000000005743 216.0
YHH3_k127_1621665_15 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000000000001634 158.0
YHH3_k127_1621665_2 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 0.0 1107.0
YHH3_k127_1621665_3 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 0.0 1081.0
YHH3_k127_1621665_4 TIGRFAM arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 3.439e-251 786.0
YHH3_k127_1621665_5 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01835,K01840 - 5.4.2.2,5.4.2.8 3.289e-229 723.0
YHH3_k127_1621665_6 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 6.249e-213 666.0
YHH3_k127_1621665_7 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 563.0
YHH3_k127_1621665_8 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K04488,K13819 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 444.0
YHH3_k127_1621665_9 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 425.0
YHH3_k127_1629459_0 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 2.641e-213 675.0
YHH3_k127_1629459_1 Mechanosensitive ion channel K22044 - - 1.272e-201 654.0
YHH3_k127_1629459_2 AzlC protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000837 322.0
YHH3_k127_1629459_3 Psort location CytoplasmicMembrane, score 10.00 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009625 299.0
YHH3_k127_1629459_4 membrane - - - 0.00000000000000000000000000000000000000000000000000003214 194.0
YHH3_k127_1629459_5 Branched-chain amino acid transport protein (AzlD) - - - 0.0000000000000000000000000000000000000000006092 165.0
YHH3_k127_1629459_6 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000003743 136.0
YHH3_k127_1629459_7 chitin binding - - - 0.0000001736 60.0
YHH3_k127_163350_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 4e-323 1014.0
YHH3_k127_163350_1 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 4.251e-249 773.0
YHH3_k127_163350_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001245 252.0
YHH3_k127_163350_11 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000006347 219.0
YHH3_k127_163350_12 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000003724 183.0
YHH3_k127_163350_13 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000007803 171.0
YHH3_k127_163350_14 Domain of unknown function (DUF309) - - - 0.000000000000000000000000000000000000000001626 161.0
YHH3_k127_163350_15 - - - - 0.000000000000000000000000000000000000002206 168.0
YHH3_k127_163350_16 Histidine kinase A domain protein - - - 0.0001392 50.0
YHH3_k127_163350_2 PFAM Cys Met metabolism K01740 - 2.5.1.49 4.868e-239 744.0
YHH3_k127_163350_3 PFAM ABC transporter K15738 - - 2.067e-214 682.0
YHH3_k127_163350_4 TIGRFAM ammonium transporter K03320 - - 1.796e-209 656.0
YHH3_k127_163350_5 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008578 537.0
YHH3_k127_163350_6 Endonuclease/Exonuclease/phosphatase family K07004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007984 544.0
YHH3_k127_163350_7 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 473.0
YHH3_k127_163350_8 cytochrome C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006927 396.0
YHH3_k127_163350_9 SMART ATP-binding region ATPase domain protein K03406,K07710 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000001425 272.0
YHH3_k127_1724235_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 3.833e-294 914.0
YHH3_k127_1724235_1 Domain of unknown function DUF87 - - - 1.071e-261 829.0
YHH3_k127_1724235_10 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000004592 267.0
YHH3_k127_1724235_11 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000002648 241.0
YHH3_k127_1724235_12 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000001773 190.0
YHH3_k127_1724235_13 PFAM Maf family protein K06287 - - 0.000000000000000000000000000000000000000000000000005776 189.0
YHH3_k127_1724235_14 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000002912 89.0
YHH3_k127_1724235_2 DnaB-like helicase C terminal domain - - - 6.484e-226 715.0
YHH3_k127_1724235_3 aldolase class-II K01624 - 4.1.2.13 2.277e-204 645.0
YHH3_k127_1724235_4 sigma-54 factor interaction domain-containing protein K02667 - - 2.95e-202 638.0
YHH3_k127_1724235_5 PFAM NAD dependent epimerase dehydratase family K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 562.0
YHH3_k127_1724235_6 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 492.0
YHH3_k127_1724235_7 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 371.0
YHH3_k127_1724235_8 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 294.0
YHH3_k127_1724235_9 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005112 276.0
YHH3_k127_1759770_0 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 3.454e-197 625.0
YHH3_k127_1759770_1 Uncharacterised ArCR, COG2043 - - - 0.0000000255 57.0
YHH3_k127_1759770_2 activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase K07684 - - 0.00000525 50.0
YHH3_k127_1764747_0 Bacterial regulatory protein, Fis family - - - 5.628e-209 670.0
YHH3_k127_1764747_1 Predicted permease K07089 - - 5.007e-195 616.0
YHH3_k127_1764747_10 TIGRFAM redox-active disulfide protein 2 - - - 0.000000000000000000000000000000007675 128.0
YHH3_k127_1764747_11 Motility response receiver histidine kinase - - - 0.00000000000000000000000000000215 134.0
YHH3_k127_1764747_12 von Willebrand factor, type A K12549 - - 0.0000000007808 70.0
YHH3_k127_1764747_13 selenoprotein - - - 0.00001359 54.0
YHH3_k127_1764747_2 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009528 507.0
YHH3_k127_1764747_3 PFAM Cytochrome C biogenesis protein transmembrane region K06196 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008419 376.0
YHH3_k127_1764747_4 Uncharacterised conserved protein (DUF2156) K01163 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 356.0
YHH3_k127_1764747_5 cation diffusion facilitator family transporter K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003103 336.0
YHH3_k127_1764747_6 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000743 306.0
YHH3_k127_1764747_7 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005038 297.0
YHH3_k127_1764747_8 PFAM Thioredoxin K03671 - - 0.000000000000000000000000000000000000001837 151.0
YHH3_k127_1764747_9 regulatory protein, arsR K03892 - - 0.000000000000000000000000000000004291 132.0
YHH3_k127_1787352_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 1.205e-245 762.0
YHH3_k127_1787352_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by K00053 - 1.1.1.86 3.003e-238 748.0
YHH3_k127_1787352_10 PFAM transglutaminase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001648 237.0
YHH3_k127_1787352_11 PFAM PHP domain protein K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000003181 193.0
YHH3_k127_1787352_12 - - - - 0.00000002838 57.0
YHH3_k127_1787352_2 Homocysteine S-methyltransferase K00297,K00547,K00548 - 1.5.1.20,2.1.1.10,2.1.1.13 5.603e-232 737.0
YHH3_k127_1787352_3 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 1.027e-213 667.0
YHH3_k127_1787352_4 G-rich domain on putative tyrosine kinase K16554 - - 1.758e-210 679.0
YHH3_k127_1787352_5 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 575.0
YHH3_k127_1787352_6 Lipid A core-O-antigen ligase-like enyme K18814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 567.0
YHH3_k127_1787352_7 export protein K01991 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 294.0
YHH3_k127_1787352_8 Putative beta-barrel porin 2 K20920 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001288 294.0
YHH3_k127_1787352_9 3D domain protein K21471 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005933 269.0
YHH3_k127_1829506_0 - - - - 0.000000000000000000000000000000000000000000000000000001311 194.0
YHH3_k127_1829506_1 peroxiredoxin activity - - - 0.00000000000000000000000000000000000000000005457 169.0
YHH3_k127_1853997_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 6.893e-257 808.0
YHH3_k127_1853997_1 peptidyl-prolyl cis-trans isomerase activity K03770,K03771,K07533 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009398 359.0
YHH3_k127_1853997_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000142 261.0
YHH3_k127_1853997_4 Lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000003154 208.0
YHH3_k127_1869909_0 TIGRFAM sulfite reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 1.572e-256 793.0
YHH3_k127_1869909_1 Belongs to the GPI family K01810 - 5.3.1.9 4.692e-229 721.0
YHH3_k127_1869909_11 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000001967 123.0
YHH3_k127_1869909_12 PFAM Dissimilatory sulfite reductase D - - - 0.00000000000000000000000000006342 118.0
YHH3_k127_1869909_14 Predicted RNA-binding protein - - - 0.000000146 55.0
YHH3_k127_1869909_2 TIGRFAM sulfite reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 3.734e-218 679.0
YHH3_k127_1869909_3 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 432.0
YHH3_k127_1869909_4 PFAM Ubiquitin-conjugating - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 442.0
YHH3_k127_1869909_5 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 398.0
YHH3_k127_1869909_6 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008366 329.0
YHH3_k127_1869909_7 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000009628 222.0
YHH3_k127_1869909_8 cyclic nucleotide binding K10914 - - 0.00000000000000000000000000000000000000000000000000000000000003975 221.0
YHH3_k127_1869909_9 biotin-[acetyl-CoA-carboxylase] ligase activity K03524 - 6.3.4.15 0.000000000000000000000000000000000000000518 158.0
YHH3_k127_1950419_0 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase - - - 0.0 1393.0
YHH3_k127_1950419_1 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000001252 95.0
YHH3_k127_1950419_2 CsbD-like - - - 0.000000000000000001002 86.0
YHH3_k127_1950419_3 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000021 64.0
YHH3_k127_1950419_4 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000000008884 59.0
YHH3_k127_1954477_0 PFAM Histone deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002807 416.0
YHH3_k127_1954477_1 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 333.0
YHH3_k127_1954477_2 PFAM CBS domain K04767 - - 0.0000000000000000000000000000000000000000000000000000000000000000789 228.0
YHH3_k127_1954477_3 PFAM peptidase S13 D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.00000000000000000000000000000000002232 140.0
YHH3_k127_1954477_4 - - - - 0.00009355 52.0
YHH3_k127_1965472_0 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 501.0
YHH3_k127_1965472_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 329.0
YHH3_k127_1965472_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001034 256.0
YHH3_k127_1965472_3 PAC sensor-containing diguanylate cyclase - - - 0.0000000000000000000000133 116.0
YHH3_k127_2026089_0 PFAM Integrase catalytic region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 495.0
YHH3_k127_2026089_1 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005093 332.0
YHH3_k127_2026089_2 - - - - 0.0000000000000000000000000000000001739 139.0
YHH3_k127_2026089_3 Tetratricopeptide repeat - - - 0.000000000001703 69.0
YHH3_k127_2027626_0 NAD dependent epimerase/dehydratase family K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008861 357.0
YHH3_k127_2027626_1 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000002131 96.0
YHH3_k127_2027626_2 Rubrerythrin - - - 0.0000000000000000241 83.0
YHH3_k127_2116393_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 1.3e-322 998.0
YHH3_k127_2116393_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 4.928e-240 748.0
YHH3_k127_2116393_2 PFAM Response regulator receiver domain K07712 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 589.0
YHH3_k127_2116393_3 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009268 346.0
YHH3_k127_2116393_4 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009365 345.0
YHH3_k127_2116393_5 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 318.0
YHH3_k127_2116393_6 May be involved in recombination - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002137 271.0
YHH3_k127_2116393_7 Putative exonuclease, RdgC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001076 267.0
YHH3_k127_2116393_8 PFAM TPR repeat-containing protein - - - 0.0000000000000000000000000000000000000000003313 179.0
YHH3_k127_2116393_9 Histidine kinase - - - 0.000000000000000000000000001445 130.0
YHH3_k127_2121310_0 E1-E2 ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002707 237.0
YHH3_k127_2121310_1 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000669 161.0
YHH3_k127_2121310_10 ParB-like nuclease domain - - - 0.000000000001458 71.0
YHH3_k127_2121310_11 - - - - 0.00001934 53.0
YHH3_k127_2121310_2 - - - - 0.00000000000000000000000000000000000004249 146.0
YHH3_k127_2121310_3 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette K15342 - - 0.00000000000000000000000000000000006494 134.0
YHH3_k127_2121310_4 PIN domain - - - 0.000000000000000000000000000001675 124.0
YHH3_k127_2121310_5 PFAM Cold-shock K03704 - - 0.000000000000000000000000000004779 120.0
YHH3_k127_2121310_6 Rubrerythrin - - - 0.000000000000000000000000001284 117.0
YHH3_k127_2121310_7 - - - - 0.000000000000000000107 92.0
YHH3_k127_2121310_8 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000001092 81.0
YHH3_k127_2128688_0 Endoribonuclease that initiates mRNA decay K18682 - - 1.086e-251 787.0
YHH3_k127_2128688_1 Lysin motif K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 476.0
YHH3_k127_2128688_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 451.0
YHH3_k127_2128688_3 ribonuclease BN K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 358.0
YHH3_k127_2128688_4 NUDIX domain K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000001351 242.0
YHH3_k127_2146049_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1044.0
YHH3_k127_2146049_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 1.63e-223 698.0
YHH3_k127_2146049_10 COG0346 Lactoylglutathione lyase and related lyases - - - 0.000000000000000000000000000000000000000000000003797 175.0
YHH3_k127_2146049_11 Uncharacterised protein family (UPF0153) K06940 - - 0.00000000000000000000000000000000000003849 149.0
YHH3_k127_2146049_12 ABC-type transport auxiliary lipoprotein component K09857 - - 0.000000000000000000000000000000000009334 145.0
YHH3_k127_2146049_14 PFAM Class I peptide chain release factor K15034 - - 0.00000000000000000000000000001473 123.0
YHH3_k127_2146049_15 cytochrome C peroxidase - - - 0.0000000000000000000000311 105.0
YHH3_k127_2146049_16 - - - - 0.00000000000000001371 91.0
YHH3_k127_2146049_17 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0003014 47.0
YHH3_k127_2146049_2 galactose-1-phosphate uridylyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 600.0
YHH3_k127_2146049_3 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 387.0
YHH3_k127_2146049_4 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004812 352.0
YHH3_k127_2146049_5 COGs COG0767 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 348.0
YHH3_k127_2146049_6 radical SAM domain protein K04070 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007019 340.0
YHH3_k127_2146049_7 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000001095 251.0
YHH3_k127_2146049_8 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009581 245.0
YHH3_k127_2146049_9 MlaD protein K06192 - - 0.000000000000000000000000000000000000000000000000000000006857 213.0
YHH3_k127_215828_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 457.0
YHH3_k127_215828_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K05580 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000002124 226.0
YHH3_k127_215828_2 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000001056 214.0
YHH3_k127_215828_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 - 1.6.5.3 0.0000000000000000000000000000000000000000000009704 168.0
YHH3_k127_215828_4 Proton-conducting membrane transporter K05568 - - 0.0000000000003753 70.0
YHH3_k127_2194102_0 Protein of unknown function (DUF1156) K07445 - - 0.0 1029.0
YHH3_k127_2194102_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 392.0
YHH3_k127_2200741_0 Glycosyl transferase family 21 - - - 0.0 1167.0
YHH3_k127_2200741_1 Outer membrane efflux protein - - - 0.0000000000000000000002179 102.0
YHH3_k127_2249001_0 TIGRFAM penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 0.0 1090.0
YHH3_k127_2285448_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 4.799e-204 642.0
YHH3_k127_2285448_1 curli production assembly transport component CsgG - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 458.0
YHH3_k127_2285448_2 PFAM MltA K08304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 348.0
YHH3_k127_2285448_3 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000000000003821 220.0
YHH3_k127_2285448_4 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.000000000000000000000000000000000000000000000008766 181.0
YHH3_k127_2285448_5 anaerobic respiration - - - 0.00000000000000000000000000000003915 135.0
YHH3_k127_2358581_0 SMART Elongator protein 3 MiaB NifB - - - 9.632e-240 762.0
YHH3_k127_2358581_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 3.542e-230 721.0
YHH3_k127_2358581_2 PFAM peptidase S13 D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 317.0
YHH3_k127_2369037_0 Catalyzes the synthesis of activated sulfate K00958 - 2.7.7.4 6.361e-290 898.0
YHH3_k127_2369037_1 PFAM LemA family protein K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003169 286.0
YHH3_k127_2369037_2 Pfam:TPM K06872 - - 0.0000000000000000000000000000000000000000000000000000000000003826 222.0
YHH3_k127_2369037_3 Pfam:TPM K08988 - - 0.0000000000000000000000000000000000000001616 163.0
YHH3_k127_2369037_4 Psort location CytoplasmicMembrane, score K02237 - - 0.00000000000000001109 86.0
YHH3_k127_2423360_0 Glycosyltransferase family 28 C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 552.0
YHH3_k127_2423360_1 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008748 499.0
YHH3_k127_2423360_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 412.0
YHH3_k127_2423360_3 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006937 372.0
YHH3_k127_2423360_4 O-acyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002199 263.0
YHH3_k127_2423360_5 - - - - 0.00000000000000000000000000000001583 142.0
YHH3_k127_2423360_6 Phosphoglycerate mutase family K15634 - 5.4.2.12 0.00000000000000000000000000000006544 130.0
YHH3_k127_2486612_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.0 1027.0
YHH3_k127_2486612_1 PFAM ferredoxin - - - 0.0 1011.0
YHH3_k127_2486612_10 Gamma subunit K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000408 412.0
YHH3_k127_2486612_11 Protein of unknown function (DUF1538) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 403.0
YHH3_k127_2486612_12 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 401.0
YHH3_k127_2486612_13 Protein of unknown function (DUF1538) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 389.0
YHH3_k127_2486612_14 PFAM phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 364.0
YHH3_k127_2486612_15 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 350.0
YHH3_k127_2486612_16 TIGRFAM tyrosine recombinase XerD K03733,K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000441 347.0
YHH3_k127_2486612_17 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 328.0
YHH3_k127_2486612_18 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000133 285.0
YHH3_k127_2486612_19 Methylates ribosomal protein L11 K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005644 282.0
YHH3_k127_2486612_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.206e-301 948.0
YHH3_k127_2486612_20 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007927 272.0
YHH3_k127_2486612_21 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000009931 268.0
YHH3_k127_2486612_22 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000000000000000000000000000000000658 220.0
YHH3_k127_2486612_23 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000001841 212.0
YHH3_k127_2486612_24 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000000000001649 208.0
YHH3_k127_2486612_25 Nitrogen regulatory protein P-II - - - 0.00000000000000000000000000000000000000000000000000000001393 199.0
YHH3_k127_2486612_26 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000000000000000001835 195.0
YHH3_k127_2486612_27 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000000000000000000000000000000001353 168.0
YHH3_k127_2486612_28 GHKL domain K07709,K07711 - 2.7.13.3 0.00000000000000000000000000000000000000000001679 175.0
YHH3_k127_2486612_29 TIGRFAM F0F1-ATPase subunit K02116 - - 0.00000000000000000000000000000000000000005799 153.0
YHH3_k127_2486612_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.84e-251 784.0
YHH3_k127_2486612_30 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000006091 146.0
YHH3_k127_2486612_31 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000004646 134.0
YHH3_k127_2486612_32 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000000000000000505 134.0
YHH3_k127_2486612_33 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000001054 104.0
YHH3_k127_2486612_35 Glucose / Sorbosone dehydrogenase - - - 0.0000000005498 63.0
YHH3_k127_2486612_38 N-ATPase, AtpR subunit - - - 0.0000001457 57.0
YHH3_k127_2486612_39 Nucleic-acid-binding protein implicated in transcription termination K02600,K07742 - - 0.0000006545 55.0
YHH3_k127_2486612_4 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 1.283e-243 768.0
YHH3_k127_2486612_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 3.034e-241 752.0
YHH3_k127_2486612_6 Participates in both transcription termination and antitermination K02600 - - 8.65e-206 648.0
YHH3_k127_2486612_7 Ferric reductase like transmembrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 602.0
YHH3_k127_2486612_8 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 563.0
YHH3_k127_2486612_9 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006409 432.0
YHH3_k127_2520774_0 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 4.21e-289 894.0
YHH3_k127_2520774_1 LeuA allosteric (dimerisation) domain K01649 - 2.3.3.13 7.536e-273 849.0
YHH3_k127_2520774_10 L,D-transpeptidase catalytic domain K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 494.0
YHH3_k127_2520774_11 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 480.0
YHH3_k127_2520774_12 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 417.0
YHH3_k127_2520774_13 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 433.0
YHH3_k127_2520774_14 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004552 392.0
YHH3_k127_2520774_15 Histidine kinase K15011 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 375.0
YHH3_k127_2520774_16 PFAM metal-dependent phosphohydrolase HD sub - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003408 333.0
YHH3_k127_2520774_17 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005514 323.0
YHH3_k127_2520774_18 cyclic nucleotide-binding K01420,K21563 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 296.0
YHH3_k127_2520774_19 Ion transport 2 domain protein K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 301.0
YHH3_k127_2520774_2 Conserved carboxylase domain K01958 - 6.4.1.1 1.979e-253 789.0
YHH3_k127_2520774_20 TIGRFAM hydrolase, TatD family K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 291.0
YHH3_k127_2520774_21 ErfK YbiS YcfS YnhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001189 253.0
YHH3_k127_2520774_22 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002451 245.0
YHH3_k127_2520774_23 regulation of ryanodine-sensitive calcium-release channel activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000001212 247.0
YHH3_k127_2520774_24 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000002744 219.0
YHH3_k127_2520774_25 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000003411 216.0
YHH3_k127_2520774_26 Domain of unknown function (DUF296) - - - 0.00000000000000000000000000000000000000000000000000003066 192.0
YHH3_k127_2520774_27 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000000000000000002554 159.0
YHH3_k127_2520774_29 Thioredoxin - - - 0.0000000000000000000000000000000000000001795 154.0
YHH3_k127_2520774_3 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.222e-226 707.0
YHH3_k127_2520774_30 helix_turn_helix, Arsenical Resistance Operon Repressor K21903 - - 0.0000000000000000000000000000000000000002771 154.0
YHH3_k127_2520774_31 SMART Extracellular solute-binding protein, family 3 K02020 - - 0.0000000000000000000000000000000000000004665 158.0
YHH3_k127_2520774_32 Protein of unknown function (DUF615) K09889 - - 0.0000000000000000000000000000000000000006804 157.0
YHH3_k127_2520774_33 PFAM FeoA K04758 - - 0.000000000000000000000000000000000007049 138.0
YHH3_k127_2520774_34 - - - - 0.000000000000000000000000000000001326 131.0
YHH3_k127_2520774_35 Thioredoxin - - - 0.00000000000000000000000000000002203 130.0
YHH3_k127_2520774_36 response regulator K15012 - - 0.00000000000000000000000000001147 121.0
YHH3_k127_2520774_37 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000009856 98.0
YHH3_k127_2520774_38 chromosome segregation K03497 - - 0.000000000000000000001903 105.0
YHH3_k127_2520774_4 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.619e-222 695.0
YHH3_k127_2520774_5 type II secretion system K02653 - - 2.987e-196 618.0
YHH3_k127_2520774_6 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005708 551.0
YHH3_k127_2520774_7 PFAM Iron-containing alcohol dehydrogenase K00001,K19954 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 544.0
YHH3_k127_2520774_8 PFAM PhoH family protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007749 512.0
YHH3_k127_2520774_9 Rhodanese Homology Domain K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 496.0
YHH3_k127_2647167_0 4-alpha-glucanotransferase K00705,K06044 - 2.4.1.25,5.4.99.15 0.0 1401.0
YHH3_k127_2647167_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 4.58e-240 759.0
YHH3_k127_2647167_10 Tautomerase enzyme K01821 - 5.3.2.6 0.00000000000000002864 83.0
YHH3_k127_2647167_11 - - - - 0.0000008862 55.0
YHH3_k127_2647167_2 TIGRFAM malto-oligosyltrehalose trehalohydrolase K01236 - 3.2.1.141 1.889e-225 714.0
YHH3_k127_2647167_3 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 514.0
YHH3_k127_2647167_4 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003695 308.0
YHH3_k127_2647167_5 ligase activity K05844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 289.0
YHH3_k127_2647167_6 cellulose binding K01179,K21449 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 307.0
YHH3_k127_2647167_7 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000004575 206.0
YHH3_k127_2647167_9 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000000000000006358 112.0
YHH3_k127_2671968_0 glycoside hydrolase, family 13 domain protein K01236 - 3.2.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 569.0
YHH3_k127_2671968_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003667 259.0
YHH3_k127_2671968_11 Protein involved in outer membrane biogenesis - - - 0.000000007668 58.0
YHH3_k127_2671968_12 DnaJ molecular chaperone homology domain - - - 0.000000007924 68.0
YHH3_k127_2671968_14 Lamin Tail Domain - - - 0.000033 57.0
YHH3_k127_2671968_15 COG1943 Transposase and inactivated derivatives K07491 - - 0.00008874 46.0
YHH3_k127_2671968_2 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001121 248.0
YHH3_k127_2671968_3 Protein of unknown function (DUF533) - - - 0.0000000000000000000000000000000000000000000000000000000005144 211.0
YHH3_k127_2671968_4 - - - - 0.000000000000000000000000000000000000000009097 159.0
YHH3_k127_2671968_5 PFAM Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000000008031 149.0
YHH3_k127_2671968_6 Peptidoglycan-synthase activator LpoB - - - 0.00000000000000000000000001292 117.0
YHH3_k127_2671968_8 HYR domain - - - 0.000000000000000000000000899 120.0
YHH3_k127_2671968_9 Transposase IS200 like K07491 - - 0.00000000000001338 74.0
YHH3_k127_2726634_0 lactoylglutathione lyase activity K08234 - - 0.000000000000000000000000000000000000000000001669 168.0
YHH3_k127_2726634_1 peptidase - - - 0.0000000000000000002775 100.0
YHH3_k127_2726634_2 Purple acid Phosphatase, N-terminal domain - - - 0.0000001694 56.0
YHH3_k127_3016632_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 9.163e-223 700.0
YHH3_k127_3016632_1 methionine sulfoxide reductase K07305,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000002014 193.0
YHH3_k127_3019727_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.119e-296 917.0
YHH3_k127_3019727_1 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate K10206 GO:0003674,GO:0003824,GO:0008483,GO:0016740,GO:0016769 2.6.1.83 1.207e-215 674.0
YHH3_k127_3019727_10 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K01607 - 4.1.1.44 0.000000000000000000000000000000000000000000000000001801 184.0
YHH3_k127_3019727_11 Glycosyl transferase family 2 K09931 - - 0.00000000000000000000000000000000000000000000002015 188.0
YHH3_k127_3019727_12 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000001956 156.0
YHH3_k127_3019727_13 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000005552 143.0
YHH3_k127_3019727_14 Colicin V production protein K03558 - - 0.0000000000000000000000000000000000005639 148.0
YHH3_k127_3019727_15 Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b) K07337 - - 0.0000000000000000007861 97.0
YHH3_k127_3019727_16 Belongs to the P-Pant transferase superfamily K02362,K06133 - 6.3.2.14 0.00000000000004454 82.0
YHH3_k127_3019727_17 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity K13985 - 3.1.4.54 0.00002242 48.0
YHH3_k127_3019727_2 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 392.0
YHH3_k127_3019727_3 PFAM Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006842 389.0
YHH3_k127_3019727_4 PFAM Glutamine cyclotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001158 283.0
YHH3_k127_3019727_5 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000007573 257.0
YHH3_k127_3019727_6 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001421 246.0
YHH3_k127_3019727_7 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000000000000002691 221.0
YHH3_k127_3019727_8 PFAM ApbE family K09740 - - 0.000000000000000000000000000000000000000000000000000000001374 206.0
YHH3_k127_3019727_9 lipopolysaccharide transmembrane transporter activity K09774,K11719 - - 0.000000000000000000000000000000000000000000000000000000009402 206.0
YHH3_k127_302559_0 permease YjgP YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005403 550.0
YHH3_k127_302559_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 516.0
YHH3_k127_302559_10 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000000006697 115.0
YHH3_k127_302559_11 - - - - 0.00000000000000000000000387 105.0
YHH3_k127_302559_12 PA14 domain - - - 0.000000000000003418 83.0
YHH3_k127_302559_13 Tetratricopeptide repeat - - - 0.0001233 46.0
YHH3_k127_302559_2 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 484.0
YHH3_k127_302559_3 serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 338.0
YHH3_k127_302559_4 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 318.0
YHH3_k127_302559_5 PFAM peptidase U61 LD-carboxypeptidase A K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000405 312.0
YHH3_k127_302559_6 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000000000000000000000000000000000000000001435 226.0
YHH3_k127_302559_7 PFAM CBS domain - - - 0.0000000000000000000000000000000000000000000000000302 183.0
YHH3_k127_302559_8 - - - - 0.0000000000000000000000000000000000000000000000007772 182.0
YHH3_k127_302559_9 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000006322 119.0
YHH3_k127_3061816_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1894.0
YHH3_k127_3061816_1 Voltage gated chloride channel K03281 - - 8.299e-291 902.0
YHH3_k127_3061816_10 - - - - 0.0000000000000000000001381 99.0
YHH3_k127_3061816_11 ATP-independent chaperone mediated protein folding K07803 - - 0.000000000000000461 84.0
YHH3_k127_3061816_12 - - - - 0.0000000000002113 77.0
YHH3_k127_3061816_13 Short C-terminal domain K08982 - - 0.0000003559 55.0
YHH3_k127_3061816_2 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 6.672e-199 629.0
YHH3_k127_3061816_3 PFAM ATP-binding region ATPase domain protein K07709 - 2.7.13.3 6.563e-194 634.0
YHH3_k127_3061816_4 chorismate binding enzyme K01665,K03342 - 2.6.1.85,4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 537.0
YHH3_k127_3061816_5 SMART metal-dependent phosphohydrolase HD region K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003646 480.0
YHH3_k127_3061816_6 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 324.0
YHH3_k127_3061816_7 PFAM CBS domain containing protein K04767 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 299.0
YHH3_k127_3061816_8 Intracellular protease, PfpI family K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000004047 223.0
YHH3_k127_3061816_9 Lytic transglycolase - - - 0.00000000000000000000000000000000002225 139.0
YHH3_k127_3068296_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002483 390.0
YHH3_k127_3068296_1 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 376.0
YHH3_k127_3068296_2 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008297 340.0
YHH3_k127_3068296_3 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004106 322.0
YHH3_k127_3068296_4 Glycosyltransferase like family 2 K07011,K15257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 320.0
YHH3_k127_3068296_5 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008269 251.0
YHH3_k127_3068296_6 - - - - 0.00000000000000000000000008273 115.0
YHH3_k127_3068296_7 Belongs to the sulfotransferase 1 family K01025,K16949 GO:0003674,GO:0003824,GO:0006790,GO:0008146,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016782,GO:0044237,GO:0051923 2.8.2.3 0.0000000000000001559 95.0
YHH3_k127_3081012_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 493.0
YHH3_k127_3081012_1 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 376.0
YHH3_k127_3081012_2 Binding-protein-dependent transport system inner membrane component K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 370.0
YHH3_k127_3081012_3 Binding-protein-dependent transport system inner membrane component K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004511 306.0
YHH3_k127_3081012_4 ABC transporter K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006204 276.0
YHH3_k127_3081012_5 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002268 254.0
YHH3_k127_3081012_6 - - - - 0.00000000000000000000000004137 109.0
YHH3_k127_3081012_7 Transposase IS200 like K07491 - - 0.00005401 46.0
YHH3_k127_3081254_0 PFAM Radical SAM - - - 9.481e-243 762.0
YHH3_k127_3081254_1 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000867 614.0
YHH3_k127_3081254_2 epimerase dehydratase K19997 - 5.1.3.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 563.0
YHH3_k127_3081254_3 radical SAM K04034 - 1.21.98.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007265 514.0
YHH3_k127_3081254_4 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000428 469.0
YHH3_k127_3081254_5 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.000000000000000000000000000000000000000000000007533 177.0
YHH3_k127_3081254_6 Glycogen recognition site of AMP-activated protein kinase - - - 0.000000000000000000000000000000001089 132.0
YHH3_k127_3082616_0 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 468.0
YHH3_k127_3082616_1 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 432.0
YHH3_k127_3082616_2 DEAD DEAH box helicase K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007847 383.0
YHH3_k127_3082616_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000429 366.0
YHH3_k127_3082616_4 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 289.0
YHH3_k127_3082616_5 Probably functions as a manganese efflux pump - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000251 260.0
YHH3_k127_3082616_6 PFAM Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003235 250.0
YHH3_k127_3082616_7 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001124 242.0
YHH3_k127_3082616_8 RNA recognition motif - - - 0.0000000000000000000000000000002704 126.0
YHH3_k127_3138185_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1085.0
YHH3_k127_3138185_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008046 256.0
YHH3_k127_3208514_0 Sterol-sensing domain of SREBP cleavage-activation K07003 - - 2.401e-305 959.0
YHH3_k127_3208514_1 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 524.0
YHH3_k127_3208514_10 TIGRFAM 4-oxalocrotonate tautomerase family enzyme K01821 - 5.3.2.6 0.00000000000000000000000004068 111.0
YHH3_k127_3208514_11 - - - - 0.0000000000000000000000009532 105.0
YHH3_k127_3208514_12 manually curated K06039 - - 0.000000000000000000222 92.0
YHH3_k127_3208514_13 - - - - 0.0000000000000887 73.0
YHH3_k127_3208514_14 DsrE/DsrF/DrsH-like family - - - 0.000000000001888 73.0
YHH3_k127_3208514_15 manually curated K06039 - - 0.00000000009461 62.0
YHH3_k127_3208514_2 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 485.0
YHH3_k127_3208514_3 Receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 476.0
YHH3_k127_3208514_4 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 340.0
YHH3_k127_3208514_5 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 306.0
YHH3_k127_3208514_6 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001814 273.0
YHH3_k127_3208514_7 PFAM Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004191 268.0
YHH3_k127_3208514_8 Transglycosylase associated protein - - - 0.0000000000000000000000000000000005381 132.0
YHH3_k127_3208514_9 helix_turn_helix, Arsenical Resistance Operon Repressor K22043 - - 0.0000000000000000000000000000001503 126.0
YHH3_k127_3300264_0 Hydrophobe Amphiphile Efflux-1 (HAE1) Family K03296,K18138 - - 0.0 1670.0
YHH3_k127_3300264_1 PFAM Cytochrome c, class I - - - 8.407e-314 983.0
YHH3_k127_3300264_10 Cytochrome c K08738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002971 373.0
YHH3_k127_3300264_11 PBP superfamily domain K05772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006749 354.0
YHH3_k127_3300264_12 Binding-protein-dependent transport system inner membrane component K05773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 299.0
YHH3_k127_3300264_13 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 291.0
YHH3_k127_3300264_14 Tetracycline repressor, C-terminal all-alpha domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000017 276.0
YHH3_k127_3300264_15 ABC transporter K06857 - 3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009261 281.0
YHH3_k127_3300264_16 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000000000000000000007725 235.0
YHH3_k127_3300264_17 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000002091 223.0
YHH3_k127_3300264_18 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000009093 183.0
YHH3_k127_3300264_19 General secretory system II protein E domain protein - - - 0.000000000000000000000000000000000006692 143.0
YHH3_k127_3300264_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 3.305e-250 779.0
YHH3_k127_3300264_20 methyltransferase activity - - - 0.00000000000000000000000000000000004618 143.0
YHH3_k127_3300264_21 PFAM Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.000000000000000000000000000000006594 131.0
YHH3_k127_3300264_22 PFAM NADH Ubiquinone plastoquinone (complex I) K12137 - - 0.000000000000000000003204 97.0
YHH3_k127_3300264_24 PFAM UBA THIF-type NAD FAD binding - - - 0.0000000000000006654 79.0
YHH3_k127_3300264_25 electron transfer activity K05337 - - 0.000000000003539 71.0
YHH3_k127_3300264_3 outer membrane efflux protein K18139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 587.0
YHH3_k127_3300264_4 COG NOG19133 non supervised orthologous group - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007604 533.0
YHH3_k127_3300264_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 498.0
YHH3_k127_3300264_6 Predicted membrane protein (DUF2207) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 508.0
YHH3_k127_3300264_7 PFAM binding-protein-dependent transport systems inner membrane component K02029 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008371 409.0
YHH3_k127_3300264_8 ABC transporter K02028 - 3.6.3.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006897 368.0
YHH3_k127_3300264_9 Bacterial periplasmic substrate-binding proteins K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 369.0
YHH3_k127_3346793_0 PFAM Aldehyde ferredoxin oxidoreductase K03738 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016614,GO:0030151,GO:0033719,GO:0043167,GO:0043169,GO:0043546,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071944,GO:0097159,GO:1901363 1.2.7.5 8.448e-215 691.0
YHH3_k127_3346793_1 Alginate export - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008098 417.0
YHH3_k127_3346793_10 Transcriptional regulator - - - 0.0000000000000000000004411 102.0
YHH3_k127_3346793_11 - - - - 0.000000000000000000005552 94.0
YHH3_k127_3346793_12 viral genome integration into host DNA K04763 - - 0.00000000000001263 77.0
YHH3_k127_3346793_2 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 387.0
YHH3_k127_3346793_3 Lytic transglycosylase catalytic K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 325.0
YHH3_k127_3346793_4 viral genome integration into host DNA K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001349 244.0
YHH3_k127_3346793_5 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000005975 235.0
YHH3_k127_3346793_6 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000009782 203.0
YHH3_k127_3346793_7 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000002855 198.0
YHH3_k127_3346793_8 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000001799 152.0
YHH3_k127_3346793_9 PFAM transposase IS4 family protein - - - 0.0000000000000000000000001212 107.0
YHH3_k127_3364095_0 Tar ligand binding domain homologue K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 329.0
YHH3_k127_3388817_0 Pyruvate phosphate dikinase, PEP K01006 - 2.7.9.1 0.0 2035.0
YHH3_k127_3388817_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1165.0
YHH3_k127_3388817_10 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 396.0
YHH3_k127_3388817_11 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006571 381.0
YHH3_k127_3388817_12 SMART Metal-dependent phosphohydrolase, HD region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 323.0
YHH3_k127_3388817_13 DNA polymerase III, epsilon subunit K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 285.0
YHH3_k127_3388817_14 hydrogenase 4 membrane K12140 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008755 275.0
YHH3_k127_3388817_15 SMART Appr-1-p processing domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001993 257.0
YHH3_k127_3388817_16 NGG1p interacting factor 3 K22391 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000052 255.0
YHH3_k127_3388817_17 C4-type zinc ribbon domain K07164 - - 0.000000000000000000000000000000000000000000000000000000000000000003247 233.0
YHH3_k127_3388817_18 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000002833 226.0
YHH3_k127_3388817_19 DNA excision K02768,K02769,K02770,K02773,K02806,K03491 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0015791,GO:0015796,GO:0015850,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044424,GO:0044444,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563,GO:0090584 2.7.1.200,2.7.1.202 0.000000000000000000000000000000000000000000000008839 183.0
YHH3_k127_3388817_2 Putative nucleotidyltransferase substrate binding domain K07182 - - 8.5e-305 945.0
YHH3_k127_3388817_20 Ribonuclease H K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000002459 178.0
YHH3_k127_3388817_21 DNA-binding transcription factor activity K03892,K07721,K22042,K22491 - - 0.000000000000000000000000000000000003375 139.0
YHH3_k127_3388817_22 Domain of unknown function (DUF4212) - - - 0.0000000000000000000000000000000009149 133.0
YHH3_k127_3388817_23 lyase activity - - - 0.000000000000000000000000000000001659 148.0
YHH3_k127_3388817_26 - - - - 0.000000000000000001466 97.0
YHH3_k127_3388817_27 PFAM dihydropteroate synthase, DHPS K15023 - 2.1.1.258 0.00000000000000005542 92.0
YHH3_k127_3388817_28 - - - - 0.0000007504 55.0
YHH3_k127_3388817_29 - - - - 0.00002812 46.0
YHH3_k127_3388817_3 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 2.772e-241 752.0
YHH3_k127_3388817_4 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 1.162e-196 625.0
YHH3_k127_3388817_5 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007308 605.0
YHH3_k127_3388817_6 Proton-conducting membrane transporter K12141 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 540.0
YHH3_k127_3388817_7 PFAM Radical SAM domain protein K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 504.0
YHH3_k127_3388817_8 TIGRFAM peptidase T-like protein K01258 - 3.4.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009134 489.0
YHH3_k127_3388817_9 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 478.0
YHH3_k127_346962_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1239.0
YHH3_k127_346962_1 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 1.717e-290 910.0
YHH3_k127_346962_10 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003841 573.0
YHH3_k127_346962_11 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 455.0
YHH3_k127_346962_12 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 336.0
YHH3_k127_346962_13 FAD binding domain K10960,K21401 - 1.3.1.111,1.3.1.83,1.3.99.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006612 342.0
YHH3_k127_346962_14 PFAM Integral membrane protein TerC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009183 286.0
YHH3_k127_346962_15 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004042 276.0
YHH3_k127_346962_16 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000002537 264.0
YHH3_k127_346962_17 - - - - 0.0000000000000000000000000000000000000000000000000000000003219 214.0
YHH3_k127_346962_18 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000004472 199.0
YHH3_k127_346962_19 Domain of unknown function (DUF4390) - - - 0.00000000000000000000000000000000000000000000000000001003 195.0
YHH3_k127_346962_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.905e-281 886.0
YHH3_k127_346962_20 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000006684 182.0
YHH3_k127_346962_21 Pfam SEC-C motif - - - 0.00000000000000000000000000000000000000000000000005452 183.0
YHH3_k127_346962_22 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000000007124 179.0
YHH3_k127_346962_23 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000217 176.0
YHH3_k127_346962_24 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000000000000000009552 138.0
YHH3_k127_346962_25 VanZ like family - - - 0.0000000000000000000000009359 110.0
YHH3_k127_346962_26 - - - - 0.000000000000000009738 87.0
YHH3_k127_346962_27 - - - - 0.000000000003674 70.0
YHH3_k127_346962_3 glycyl-tRNA synthetase, beta K01879 - 6.1.1.14 1.566e-255 808.0
YHH3_k127_346962_4 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 2.259e-220 691.0
YHH3_k127_346962_5 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 1.411e-212 666.0
YHH3_k127_346962_6 response regulator receiver K13599 - - 8.595e-205 645.0
YHH3_k127_346962_7 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 582.0
YHH3_k127_346962_8 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 568.0
YHH3_k127_346962_9 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 567.0
YHH3_k127_3495378_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1410.0
YHH3_k127_3495378_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 3.599e-216 677.0
YHH3_k127_3495378_10 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 433.0
YHH3_k127_3495378_11 Secretin and TonB N terminus short domain K02666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 394.0
YHH3_k127_3495378_12 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 332.0
YHH3_k127_3495378_13 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 311.0
YHH3_k127_3495378_14 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 308.0
YHH3_k127_3495378_15 Belongs to the SfsA family K06206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003261 295.0
YHH3_k127_3495378_16 PFAM Radical SAM K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000005793 233.0
YHH3_k127_3495378_17 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000000000000000000000000000000000000000000000000000001009 233.0
YHH3_k127_3495378_18 AAA domain K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000001401 239.0
YHH3_k127_3495378_19 PFAM Pilus assembly protein PilO K02664 - - 0.000000000000000000000000000000000000000000000000000000000000000004375 232.0
YHH3_k127_3495378_2 Domain of unknown function (DUF4143) - - - 1.105e-215 674.0
YHH3_k127_3495378_20 PFAM Major Facilitator Superfamily K08224 - - 0.000000000000000000000000000000000000000000000000000000000000000008795 240.0
YHH3_k127_3495378_21 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000001563 218.0
YHH3_k127_3495378_22 Bacterial protein of unknown function (DUF882) - - - 0.000000000000000000000000000000000000000000000000002482 188.0
YHH3_k127_3495378_23 PFAM Fimbrial assembly K02663 - - 0.0000000000000000000000000000000000000000000005552 172.0
YHH3_k127_3495378_24 CoA-binding domain protein K06929 - - 0.0000000000000000000000000000000000000000001383 163.0
YHH3_k127_3495378_25 Pilus assembly protein, PilP K02664,K02665 - - 0.000000000000000000000000000000002613 136.0
YHH3_k127_3495378_26 PFAM Preprotein translocase SecG subunit K03075 - - 0.00000000000000000000000000001791 124.0
YHH3_k127_3495378_27 - - - - 0.00000000000000000000000000008536 119.0
YHH3_k127_3495378_28 Transcriptional regulator K03655 - 3.6.4.12 0.00000003902 57.0
YHH3_k127_3495378_29 SMART Chromosomal replication initiator DnaA domain - - - 0.0000003612 54.0
YHH3_k127_3495378_3 Bacterial type II and III secretion system protein K12282 - - 1.395e-200 641.0
YHH3_k127_3495378_4 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 557.0
YHH3_k127_3495378_5 PFAM glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 546.0
YHH3_k127_3495378_6 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000504 535.0
YHH3_k127_3495378_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 488.0
YHH3_k127_3495378_8 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 470.0
YHH3_k127_3495378_9 Fic/DOC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 460.0
YHH3_k127_353329_0 PFAM type II secretion system protein E K02669 - - 8.963e-205 640.0
YHH3_k127_353329_1 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 533.0
YHH3_k127_353329_2 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006297 313.0
YHH3_k127_353329_3 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000542 272.0
YHH3_k127_354149_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1387.0
YHH3_k127_354149_1 Region found in RelA / SpoT proteins K00951 - 2.7.6.5 1.475e-320 993.0
YHH3_k127_354149_10 Belongs to the HesB IscA family - - - 0.00000000000000000000000003852 108.0
YHH3_k127_354149_11 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117 - - 0.000000000000000000006794 100.0
YHH3_k127_354149_13 Belongs to the HesB IscA family - - - 0.00007671 46.0
YHH3_k127_354149_2 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 5.308e-231 736.0
YHH3_k127_354149_3 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006743 332.0
YHH3_k127_354149_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 291.0
YHH3_k127_354149_5 PFAM ABC transporter K09817 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 289.0
YHH3_k127_354149_6 endonuclease III K07457 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004252 260.0
YHH3_k127_354149_7 ABC 3 transport family K09816,K09819 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003008 256.0
YHH3_k127_354149_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000003468 215.0
YHH3_k127_354149_9 - - - - 0.000000000000000000000000000000000001753 139.0
YHH3_k127_3599280_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1322.0
YHH3_k127_3599280_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1279.0
YHH3_k127_3599280_2 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 4.932e-264 821.0
YHH3_k127_3599280_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 552.0
YHH3_k127_3599280_4 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006131 372.0
YHH3_k127_3599280_5 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008741 336.0
YHH3_k127_3599280_6 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009796 268.0
YHH3_k127_3675140_0 Aminotransferase class-III K03851,K15372 - 2.6.1.55,2.6.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 394.0
YHH3_k127_3675140_1 Transcriptional regulator IclR - - - 0.000000000000000000000000000000000000000002172 165.0
YHH3_k127_3675140_2 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000004762 138.0
YHH3_k127_3694146_0 cellulose binding - - - 1.142e-204 646.0
YHH3_k127_3762103_0 PFAM Band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000001747 217.0
YHH3_k127_3762103_1 PFAM Transposase DDE domain - - - 0.000000000000000000000000000000000000000000000000004199 197.0
YHH3_k127_378329_0 Voltage gated chloride channel K03281 - - 3.841e-279 873.0
YHH3_k127_378329_1 MMPL family K07003 - - 1.193e-275 870.0
YHH3_k127_378329_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009483 415.0
YHH3_k127_378329_11 UV-endonuclease UvdE K13281 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 373.0
YHH3_k127_378329_12 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 367.0
YHH3_k127_378329_13 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003418 354.0
YHH3_k127_378329_14 Type III restriction enzyme res subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007057 341.0
YHH3_k127_378329_15 Acyl-transferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 289.0
YHH3_k127_378329_16 Polysaccharide deacetylase K22278 - 3.5.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004443 277.0
YHH3_k127_378329_17 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006516 278.0
YHH3_k127_378329_18 Lipid A 3-O-deacylase (PagL) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004529 275.0
YHH3_k127_378329_19 PFAM flavin reductase domain protein FMN-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000001489 226.0
YHH3_k127_378329_2 SMART Elongator protein 3 MiaB NifB - - - 3.058e-256 797.0
YHH3_k127_378329_20 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000000000000000000000000000000000000000000000000005726 221.0
YHH3_k127_378329_21 Lipocalin-like domain K03098 - - 0.00000000000000000000000000000000000000000000000004319 184.0
YHH3_k127_378329_22 coenzyme F420 binding K00275 - 1.4.3.5 0.000000000000000000000000000000001215 135.0
YHH3_k127_378329_23 Phosphopantetheine attachment site - - - 0.000000000000000000000000000000506 124.0
YHH3_k127_378329_24 Domain of unknown function (DUF4410) - - - 0.00000000000000000000000000001896 125.0
YHH3_k127_378329_25 Phosphopantetheine attachment site K02078 - - 0.00000000000000000000000007254 110.0
YHH3_k127_378329_26 - - - - 0.000000000000000000000000555 109.0
YHH3_k127_378329_27 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 0.00000000000000000002131 96.0
YHH3_k127_378329_28 - - - - 0.00000000000000008817 84.0
YHH3_k127_378329_3 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 2.917e-223 696.0
YHH3_k127_378329_30 Cytochrome b5-like Heme/Steroid binding domain - - - 0.00000002577 61.0
YHH3_k127_378329_4 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005041 590.0
YHH3_k127_378329_5 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 562.0
YHH3_k127_378329_6 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008373 538.0
YHH3_k127_378329_7 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 503.0
YHH3_k127_378329_8 Butirosin biosynthesis protein H, N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004447 481.0
YHH3_k127_378329_9 PFAM Integrase catalytic region K07497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004537 436.0
YHH3_k127_3802652_0 Bacterial dnaA protein - - - 0.0000000000000000000004486 99.0
YHH3_k127_3802652_1 Interacts with a short DNA sequence about one-quarter of the way into the major capsid protein gene 23 of T4 - GO:0003674,GO:0003824,GO:0006417,GO:0006448,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009889,GO:0010468,GO:0010556,GO:0010608,GO:0016787,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0032268,GO:0034248,GO:0043170,GO:0044238,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:2000112 - 0.00000000000001112 80.0
YHH3_k127_3802652_2 PFAM MULE transposase, conserved domain - - - 0.0000004102 64.0
YHH3_k127_3812242_1 diguanylate cyclase K02488 - 2.7.7.65 0.000000000000000004777 85.0
YHH3_k127_3812242_2 - - - - 0.000000000000001131 90.0
YHH3_k127_3812242_3 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000006178 62.0
YHH3_k127_3821566_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 507.0
YHH3_k127_3821566_1 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005837 340.0
YHH3_k127_3821566_2 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001317 279.0
YHH3_k127_3821566_3 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000000000000000000000000001659 229.0
YHH3_k127_3877527_0 COG4770 Acetyl propionyl-CoA carboxylase, alpha subunit K01965 - 6.4.1.3 2.464e-211 667.0
YHH3_k127_3877527_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 347.0
YHH3_k127_3896989_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1424.0
YHH3_k127_3896989_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1157.0
YHH3_k127_3896989_2 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K20881 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 302.0
YHH3_k127_3928199_0 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 447.0
YHH3_k127_3928199_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 315.0
YHH3_k127_3929482_0 PFAM Radical SAM - - - 6.863e-211 670.0
YHH3_k127_3929482_1 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 433.0
YHH3_k127_3929482_2 ZIP Zinc transporter K07238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 397.0
YHH3_k127_3929482_3 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( K02823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009628 303.0
YHH3_k127_3929482_4 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000004559 241.0
YHH3_k127_3929482_5 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate K03785 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000002165 211.0
YHH3_k127_3929482_6 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000000000000000008401 198.0
YHH3_k127_3929482_7 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000009139 133.0
YHH3_k127_3935950_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.0 1078.0
YHH3_k127_3935950_1 Pfam:CPSase_L_chain - - - 2.199e-245 764.0
YHH3_k127_3935950_2 Seven times multi-haem cytochrome CxxCH - - - 1.903e-230 718.0
YHH3_k127_3935950_3 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 496.0
YHH3_k127_3935950_4 Transporter associated domain K06189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005875 330.0
YHH3_k127_3935950_5 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000001815 201.0
YHH3_k127_3935950_6 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000003214 188.0
YHH3_k127_3935950_7 HicB family - - - 0.0000000000000000000000000000000000000000000001109 173.0
YHH3_k127_3935950_8 - - - - 0.000000000000000000000000000001669 122.0
YHH3_k127_3935950_9 Addiction module - - - 0.000000000000000000000000000002026 125.0
YHH3_k127_3962342_0 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007854 526.0
YHH3_k127_3962342_1 PFAM CMP dCMP deaminase zinc-binding K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000001522 162.0
YHH3_k127_3962342_2 Tetratricopeptide repeat - - - 0.00005963 48.0
YHH3_k127_396673_0 methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004442 408.0
YHH3_k127_396673_1 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000001573 129.0
YHH3_k127_40146_0 CBS domain K00974 - 2.7.7.72 0.0 1233.0
YHH3_k127_40146_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 7.74e-319 991.0
YHH3_k127_40146_10 - - - - 0.0000000000000001869 85.0
YHH3_k127_40146_11 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000001363 86.0
YHH3_k127_40146_2 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 1.497e-241 759.0
YHH3_k127_40146_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 425.0
YHH3_k127_40146_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 406.0
YHH3_k127_40146_5 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 369.0
YHH3_k127_40146_6 auxin-activated signaling pathway K07088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 334.0
YHH3_k127_40146_7 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 335.0
YHH3_k127_40146_8 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002419 259.0
YHH3_k127_40146_9 Protein of unknown function (DUF3047) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001504 259.0
YHH3_k127_4055494_0 Type III restriction enzyme, res subunit - - - 1.631e-275 868.0
YHH3_k127_4055494_1 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 4.997e-248 784.0
YHH3_k127_4055494_10 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000001635 208.0
YHH3_k127_4055494_11 3-demethylubiquinone-9 3-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000001959 194.0
YHH3_k127_4055494_12 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000001003 202.0
YHH3_k127_4055494_13 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.00000000000000000000000000000000000000000000000000008697 192.0
YHH3_k127_4055494_14 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000004667 183.0
YHH3_k127_4055494_15 ATP dependent DNA ligase C terminal region K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000001844 176.0
YHH3_k127_4055494_16 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily - - - 0.00000000000000000000000000000000000000000901 174.0
YHH3_k127_4055494_17 Cytochrome P460 - - - 0.000000000000000001536 94.0
YHH3_k127_4055494_18 PilZ domain - - - 0.00003176 53.0
YHH3_k127_4055494_2 DNA polymerase X family K02347 - - 1.903e-223 706.0
YHH3_k127_4055494_3 Cyclic nucleotide-monophosphate binding domain K04739 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008688 496.0
YHH3_k127_4055494_4 PFAM Uracil-DNA glycosylase superfamily K10800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007541 334.0
YHH3_k127_4055494_5 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008698 302.0
YHH3_k127_4055494_6 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001418 274.0
YHH3_k127_4055494_7 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000222 271.0
YHH3_k127_4055494_8 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003163 260.0
YHH3_k127_4055494_9 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005527 249.0
YHH3_k127_4124807_0 hydrogenase expression formation protein HypD K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005014 427.0
YHH3_k127_4124807_1 hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 401.0
YHH3_k127_4124807_2 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.00000000000000000000000000000000000000001105 161.0
YHH3_k127_4124807_3 carbon dioxide binding K04653 - - 0.00000003057 58.0
YHH3_k127_4124807_4 Hydrogenase (NiFe) small subunit HydA K05927,K06282,K18008 - 1.12.2.1,1.12.5.1,1.12.99.6 0.000007923 49.0
YHH3_k127_4234966_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006148 404.0
YHH3_k127_4234966_1 ATP-independent chaperone mediated protein folding K07803 - - 0.00000000000001954 80.0
YHH3_k127_4267133_0 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0030234,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0065007,GO:0065009,GO:0098772 2.7.11.33,2.7.4.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004962 356.0
YHH3_k127_4267133_1 Serine aminopeptidase, S33 K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 302.0
YHH3_k127_4267133_2 MafB19-like deaminase K01493 - 3.5.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 292.0
YHH3_k127_4267133_3 - - - - 0.00000000000000000000000000000000000005583 162.0
YHH3_k127_4267133_5 - - - - 0.00000000000000000002071 92.0
YHH3_k127_4271209_0 Elongation factor SelB winged helix K03833 - - 1.022e-269 843.0
YHH3_k127_4271209_1 PFAM ferredoxin - - - 2.689e-264 829.0
YHH3_k127_4271209_10 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 292.0
YHH3_k127_4271209_11 - - - - 0.0000000000000000000000000000000000000000000000000000000001369 209.0
YHH3_k127_4271209_12 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.0000000000000000000000000000000000000000000000000000002583 196.0
YHH3_k127_4271209_13 Putative zinc- or iron-chelating domain - - - 0.000000000000000000000000000000000000000000000000005105 188.0
YHH3_k127_4271209_14 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000006164 167.0
YHH3_k127_4271209_15 AhpC/TSA family K03386 - 1.11.1.15 0.0000000000000000000000000000000000007821 141.0
YHH3_k127_4271209_16 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000125 114.0
YHH3_k127_4271209_17 Histidine kinase K02486,K07677,K07679 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009268,GO:0009628,GO:0009927,GO:0009987,GO:0010447,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0071704,GO:0140096,GO:1901564 2.7.13.3 0.000000000000004534 79.0
YHH3_k127_4271209_18 - - - - 0.000000000009106 69.0
YHH3_k127_4271209_19 Protein of unknown function (DUF1104) - - - 0.000005708 55.0
YHH3_k127_4271209_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 1.215e-211 670.0
YHH3_k127_4271209_3 Belongs to the MurCDEF family K02558 - 6.3.2.45 2.432e-194 617.0
YHH3_k127_4271209_4 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 488.0
YHH3_k127_4271209_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 409.0
YHH3_k127_4271209_6 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 390.0
YHH3_k127_4271209_7 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 302.0
YHH3_k127_4271209_8 AhpC/TSA family K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286 288.0
YHH3_k127_4271209_9 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009756 297.0
YHH3_k127_4274740_0 AAA domain - - - 0.0 1056.0
YHH3_k127_4274740_1 PFAM NADH Ubiquinone plastoquinone (complex I) K05568,K12137 - - 1.663e-263 822.0
YHH3_k127_4274740_10 Calcineurin-like phosphoesterase K03547 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007302 584.0
YHH3_k127_4274740_11 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009558 550.0
YHH3_k127_4274740_12 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 556.0
YHH3_k127_4274740_13 PFAM peptidase K08303 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 538.0
YHH3_k127_4274740_14 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 473.0
YHH3_k127_4274740_15 Mitochondrial biogenesis AIM24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 440.0
YHH3_k127_4274740_16 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 465.0
YHH3_k127_4274740_17 Cache domain K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 439.0
YHH3_k127_4274740_18 Aminotransferase class I and II K00652 - 2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 425.0
YHH3_k127_4274740_19 formate dehydrogenase K00127 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006648 419.0
YHH3_k127_4274740_2 Cytochrome c3 - - - 2.599e-263 838.0
YHH3_k127_4274740_20 cytochrome complex assembly - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000969 409.0
YHH3_k127_4274740_21 anaerobic respiration - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008265 412.0
YHH3_k127_4274740_22 Putative neutral zinc metallopeptidase K07054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 396.0
YHH3_k127_4274740_23 Domain related to MnhB subunit of Na+/H+ antiporter K05566 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004694 348.0
YHH3_k127_4274740_24 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008552 324.0
YHH3_k127_4274740_25 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 322.0
YHH3_k127_4274740_26 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 306.0
YHH3_k127_4274740_27 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 293.0
YHH3_k127_4274740_28 Predicted membrane protein (DUF2238) K08984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000107 284.0
YHH3_k127_4274740_29 PFAM binding-protein-dependent transport systems inner membrane component K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001563 255.0
YHH3_k127_4274740_3 Belongs to the NifD NifK NifE NifN family K02587 - - 9.114e-235 734.0
YHH3_k127_4274740_30 PFAM transposase IS4 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000004065 242.0
YHH3_k127_4274740_31 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.000000000000000000000000000000000000000000000000000000000000000000446 231.0
YHH3_k127_4274740_32 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000003566 227.0
YHH3_k127_4274740_34 pfam abc K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000005465 224.0
YHH3_k127_4274740_35 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000004231 215.0
YHH3_k127_4274740_36 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000001518 209.0
YHH3_k127_4274740_37 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K05567 - - 0.0000000000000000000000000000000000000000000000000000009415 194.0
YHH3_k127_4274740_38 - - - - 0.000000000000000000000000000000000000000000000000000007973 192.0
YHH3_k127_4274740_39 response regulator - - - 0.00000000000000000000000000000000000000000000000000003367 191.0
YHH3_k127_4274740_4 Sodium:sulfate symporter transmembrane region K14445 - - 2.152e-223 702.0
YHH3_k127_4274740_40 Bacterial extracellular solute-binding protein K02020 - - 0.0000000000000000000000000000000000000000000000009137 185.0
YHH3_k127_4274740_41 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000001677 176.0
YHH3_k127_4274740_42 Na+/H+ ion antiporter subunit K05569 - - 0.00000000000000000000000000000000000000000000002111 175.0
YHH3_k127_4274740_43 Protein of unknown function (DUF452) K09789 - 3.1.1.85 0.000000000000000000000000000000000000000001668 164.0
YHH3_k127_4274740_44 PFAM CBS domain - - - 0.0000000000000000000000000000000000000001807 156.0
YHH3_k127_4274740_45 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.000000000000000000000000000000000003095 140.0
YHH3_k127_4274740_46 TIGRFAM monovalent cation proton antiporter, MnhG PhaG subunit K05571 - - 0.00000000000000000000000000000000005827 136.0
YHH3_k127_4274740_47 MazG-like family - - - 0.000000000000000000000000000000002791 132.0
YHH3_k127_4274740_48 SMART cyclic nucleotide-binding K10914 - - 0.000000000000000000000000000000004185 134.0
YHH3_k127_4274740_49 Multiple resistance and pH regulation protein F (MrpF / PhaF) K05570 - - 0.000000000000000000000000000000009968 129.0
YHH3_k127_4274740_5 PFAM NADH Ubiquinone plastoquinone (complex I) K05568 - - 2.192e-215 678.0
YHH3_k127_4274740_50 response regulator - - - 0.00000000000000000000000000009892 130.0
YHH3_k127_4274740_51 response regulator K00945,K02282,K15045 - 2.7.4.25 0.0000000000000000000000000002157 119.0
YHH3_k127_4274740_52 Dinitrogenase iron-molybdenum cofactor - - - 0.0000000000000000000000000008018 115.0
YHH3_k127_4274740_53 Dinitrogenase iron-molybdenum cofactor - - - 0.0000000000000000000000002917 109.0
YHH3_k127_4274740_54 Belongs to the ArsC family - - - 0.00000000000000000000001392 102.0
YHH3_k127_4274740_55 Histidine kinase - - - 0.00000000000000000000003096 109.0
YHH3_k127_4274740_56 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000001237 69.0
YHH3_k127_4274740_58 - - - - 0.00000293 53.0
YHH3_k127_4274740_6 Belongs to the NifD NifK NifE NifN family K02592 - - 2.018e-200 634.0
YHH3_k127_4274740_7 Belongs to the peptidase S1C family K04771 - 3.4.21.107 5.566e-199 632.0
YHH3_k127_4274740_8 PFAM NADH Ubiquinone plastoquinone (complex I) K05561,K05568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006625 593.0
YHH3_k127_4274740_9 cofactor biosynthesis protein NifB K02585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 591.0
YHH3_k127_4308389_0 type II and III secretion system protein K02453 - - 8.145e-276 869.0
YHH3_k127_4308389_1 type II secretion system protein E K02454 - - 5.774e-253 791.0
YHH3_k127_4308389_10 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005813 464.0
YHH3_k127_4308389_11 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 420.0
YHH3_k127_4308389_12 Thiamine biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 372.0
YHH3_k127_4308389_13 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 340.0
YHH3_k127_4308389_14 MGS-like domain K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 322.0
YHH3_k127_4308389_15 O-Antigen ligase K02847 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006056 332.0
YHH3_k127_4308389_16 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 319.0
YHH3_k127_4308389_17 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008077 289.0
YHH3_k127_4308389_18 Fimbrial assembly family protein K02461 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004378 294.0
YHH3_k127_4308389_19 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000001646 251.0
YHH3_k127_4308389_2 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 4.187e-241 758.0
YHH3_k127_4308389_20 General secretion pathway protein K K02460 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004946 255.0
YHH3_k127_4308389_21 PFAM iron dependent repressor K03709 - - 0.0000000000000000000000000000000000000000000000000006092 189.0
YHH3_k127_4308389_22 S4 RNA-binding domain K04762 GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003727,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009451,GO:0009628,GO:0009987,GO:0016070,GO:0033554,GO:0034605,GO:0034641,GO:0043021,GO:0043023,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000001808 150.0
YHH3_k127_4308389_23 Type II secretion system (T2SS), protein M K02462 - - 0.00000000000000000000000000000000000434 143.0
YHH3_k127_4308389_24 general secretion pathway protein K02457,K02459,K10927,K12285 - - 0.0000000000000000000000000002496 123.0
YHH3_k127_4308389_25 General secretion pathway protein C K02452 - - 0.00000000000000000000001504 110.0
YHH3_k127_4308389_26 Prokaryotic N-terminal methylation motif K02458 - - 0.0000000000000000000007841 101.0
YHH3_k127_4308389_28 - - - - 0.00000000000000001203 94.0
YHH3_k127_4308389_29 Rdx family K07401 - - 0.0000000000008664 69.0
YHH3_k127_4308389_3 PFAM ATP-binding region, ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 569.0
YHH3_k127_4308389_4 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 567.0
YHH3_k127_4308389_5 PFAM peptidase K08303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 549.0
YHH3_k127_4308389_6 Sigma-54 interaction domain K07715 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004569 512.0
YHH3_k127_4308389_7 General secretion pathway protein F K02455,K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007469 508.0
YHH3_k127_4308389_8 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 490.0
YHH3_k127_4308389_9 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008852 496.0
YHH3_k127_4340798_0 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 454.0
YHH3_k127_4340798_1 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000008346 207.0
YHH3_k127_4340798_2 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000001072 196.0
YHH3_k127_4357521_0 Histidine Phosphotransfer domain K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000004575 235.0
YHH3_k127_4357521_1 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000003011 173.0
YHH3_k127_4357521_2 methyl-accepting chemotaxis protein K03406 - - 0.0000000004052 73.0
YHH3_k127_4357521_3 alginic acid biosynthetic process K10297 - - 0.00002656 46.0
YHH3_k127_438942_0 FtsX-like permease family K02004 - - 0.0 1081.0
YHH3_k127_438942_10 Pregnancy-associated plasma protein-A - - - 0.00000000000000000000000000005164 128.0
YHH3_k127_438942_13 - - - - 0.0000000002698 65.0
YHH3_k127_438942_15 DEAD DEAH box helicase domain protein K11927 - 3.6.4.13 0.000000184 56.0
YHH3_k127_438942_16 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00002569 47.0
YHH3_k127_438942_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 335.0
YHH3_k127_438942_3 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 296.0
YHH3_k127_438942_4 PFAM Pyridoxamine 5'-phosphate - - - 0.000000000000000000000000000000000000000000000000004336 183.0
YHH3_k127_438942_5 SH3 domain K07184 - - 0.00000000000000000000000000000000000000000008149 168.0
YHH3_k127_438942_6 Translation initiation factor SUI1 K03113 - - 0.000000000000000000000000000000000000000005114 157.0
YHH3_k127_438942_7 AhpC/TSA antioxidant enzyme - - - 0.000000000000000000000000000000000000005326 149.0
YHH3_k127_438942_8 PFAM Cold-shock K03704 - - 0.00000000000000000000000000000003068 126.0
YHH3_k127_438942_9 Putative prokaryotic signal transducing protein - - - 0.0000000000000000000000000000003384 125.0
YHH3_k127_4400747_0 TIGRFAM mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 4.428e-194 616.0
YHH3_k127_4400747_1 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840,K15778 - 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003926 577.0
YHH3_k127_4400747_2 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 516.0
YHH3_k127_4400747_3 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 332.0
YHH3_k127_4400747_4 PIN domain - - - 0.00000000000000000000000000000000000000000000000000000000003111 207.0
YHH3_k127_4400747_5 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000000000000000000000002269 130.0
YHH3_k127_4400747_6 PilZ domain - - - 0.000000000000000000000000000000003996 132.0
YHH3_k127_4400747_7 - - - - 0.0000000000000000000000000000007836 125.0
YHH3_k127_4400747_8 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000006344 109.0
YHH3_k127_4433522_0 Histone deacetylase - - - 0.0 1137.0
YHH3_k127_4433522_1 PFAM Transketolase K00615 - 2.2.1.1 4.267e-256 806.0
YHH3_k127_4433522_10 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 374.0
YHH3_k127_4433522_11 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006789 379.0
YHH3_k127_4433522_12 NADPH-dependent FMN reductase K03809 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 310.0
YHH3_k127_4433522_13 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004722 287.0
YHH3_k127_4433522_14 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006256 278.0
YHH3_k127_4433522_15 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005788 244.0
YHH3_k127_4433522_16 N-formylglutamate amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000004158 211.0
YHH3_k127_4433522_17 ribose 5-phosphate isomerase B K01808 GO:0003674,GO:0003824,GO:0004751,GO:0005575,GO:0005576,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 5.3.1.6 0.00000000000000000000000000000000000000000000000000002125 192.0
YHH3_k127_4433522_18 Rubrerythrin - - - 0.00000000000000000000000000000000000000000009113 166.0
YHH3_k127_4433522_19 DsrC like protein K11179 - - 0.000000000000000000000000000000000000001146 150.0
YHH3_k127_4433522_2 Pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 3.766e-216 688.0
YHH3_k127_4433522_20 part of a sulfur-relay system - - - 0.000000000000000000000000000000000000001343 148.0
YHH3_k127_4433522_21 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000008542 150.0
YHH3_k127_4433522_22 - - - - 0.000000000000000000000000000005751 123.0
YHH3_k127_4433522_24 - - - - 0.0000000000000000000008614 99.0
YHH3_k127_4433522_25 Putative zinc- or iron-chelating domain K06940 - - 0.0000000009595 64.0
YHH3_k127_4433522_26 Desulfoferrodoxin K05919 - 1.15.1.2 0.000000002143 63.0
YHH3_k127_4433522_27 IMP dehydrogenase activity - - - 0.0001298 49.0
YHH3_k127_4433522_3 RimK-like ATPgrasp N-terminal domain - - - 2.033e-202 641.0
YHH3_k127_4433522_4 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 604.0
YHH3_k127_4433522_5 sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005749 555.0
YHH3_k127_4433522_6 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 479.0
YHH3_k127_4433522_7 Glutamate-cysteine ligase family 2(GCS2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 469.0
YHH3_k127_4433522_8 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 452.0
YHH3_k127_4433522_9 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004642 412.0
YHH3_k127_4495084_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1060.0
YHH3_k127_4495084_1 TIGRFAM tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000964 233.0
YHH3_k127_4495084_2 COG5016 Pyruvate oxaloacetate carboxyltransferase K01960 - 6.4.1.1 0.000000000000000000000000000000000000000000000000000001577 192.0
YHH3_k127_4495084_3 Phosphate-starvation-inducible E - - - 0.0000000000000000000000000000000000000000000000008168 180.0
YHH3_k127_4629646_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 447.0
YHH3_k127_4629646_1 PFAM peptidase M48 Ste24p K07387 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 334.0
YHH3_k127_4629646_2 GGDEF domain K13069 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007364 317.0
YHH3_k127_4629646_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007042 265.0
YHH3_k127_4629646_4 NosL - - - 0.000000000000000000000000000000000000000000000000000000000001022 222.0
YHH3_k127_4629646_5 SMART regulatory protein ArsR K03892 - - 0.000000000000000000000000000000003381 131.0
YHH3_k127_4629646_8 Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide - - - 0.0003703 43.0
YHH3_k127_4655921_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1159.0
YHH3_k127_4655921_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 348.0
YHH3_k127_4655921_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001678 241.0
YHH3_k127_4655921_3 - - - - 0.00000000000000001335 91.0
YHH3_k127_4656741_0 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 409.0
YHH3_k127_4656741_1 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 390.0
YHH3_k127_4656741_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 376.0
YHH3_k127_4656741_3 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004147 311.0
YHH3_k127_4656741_4 ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003051 306.0
YHH3_k127_4656741_5 Catalyzes the insertion of Co(2 ) into sirohydrochlorin K02190 GO:0003674,GO:0003824,GO:0004325,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0009987,GO:0016043,GO:0016829,GO:0016852,GO:0020037,GO:0022607,GO:0042597,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044464,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050897,GO:0051259,GO:0051262,GO:0051266,GO:0065003,GO:0071840,GO:0097159,GO:1901363 4.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000001121 235.0
YHH3_k127_4656741_6 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000000000000000002632 115.0
YHH3_k127_4656741_7 Protein of unknown function (DUF2905) - - - 0.0000000000001022 73.0
YHH3_k127_468130_0 PFAM ResB family protein K07399 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006224 476.0
YHH3_k127_468130_1 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007654 438.0
YHH3_k127_468130_2 Uncharacterised protein family UPF0066 - - - 0.000000000000000000000000000000000000000000000004029 178.0
YHH3_k127_468130_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000004021 176.0
YHH3_k127_468130_4 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.0000000000000000000000000000000002908 144.0
YHH3_k127_468130_5 - - - - 0.0000003526 53.0
YHH3_k127_4687768_0 Protein of unknown function DUF89 - - - 1.973e-228 723.0
YHH3_k127_4687768_1 Belongs to the DegT DnrJ EryC1 family K13010,K19715 - 2.6.1.102,2.6.1.109 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 510.0
YHH3_k127_4687768_2 Specifically methylates the guanosine in position 1516 of 16S rRNA K15984 - 2.1.1.242 0.00000000000000000000000000008908 119.0
YHH3_k127_4706348_0 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 498.0
YHH3_k127_4706348_1 PFAM band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001064 282.0
YHH3_k127_4706348_2 -binding domain - - - 0.0000000000000000000000000000000000000000000000000000000001913 214.0
YHH3_k127_4706348_3 NUBPL iron-transfer P-loop NTPase - - - 0.0000000000000000000000000000000000000000000000103 183.0
YHH3_k127_4706348_4 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000008372 108.0
YHH3_k127_4706348_5 Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000000000000001737 108.0
YHH3_k127_4782849_0 Sodium/hydrogen exchanger family K03455 - - 7.05e-254 799.0
YHH3_k127_4782849_1 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 5.91e-210 668.0
YHH3_k127_4782849_2 Transporter associated domain K03699 - - 7.535e-204 644.0
YHH3_k127_4782849_3 PFAM Sodium calcium exchanger membrane region K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 529.0
YHH3_k127_4782849_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001696 252.0
YHH3_k127_4782849_5 bacterial-type flagellum-dependent cell motility K02396,K13276 - - 0.0000000000000000000000000000000000000008324 166.0
YHH3_k127_4782849_6 nucleoside hydrolase - - - 0.00000000000000000000000000005184 132.0
YHH3_k127_4782849_7 PFAM GtrA-like protein - - - 0.00000000000000000006758 93.0
YHH3_k127_4782849_9 glycosyl transferase family 2 K20534 - - 0.0006968 44.0
YHH3_k127_4805299_0 DEAD DEAH box helicase K06877 - - 4.25e-216 685.0
YHH3_k127_4805299_1 PFAM ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000008795 260.0
YHH3_k127_4805299_2 SH3 domain - - - 0.00000000000000000000000000000000000000000000000003874 185.0
YHH3_k127_4805299_3 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000002693 150.0
YHH3_k127_4805379_0 HAD-superfamily hydrolase, subfamily IIB K00696 - 2.4.1.14 0.0 1041.0
YHH3_k127_4805379_1 sucrose synthase K00695 - 2.4.1.13 2e-323 1009.0
YHH3_k127_4805379_10 - K00003,K00058,K01754,K04767 - 1.1.1.3,1.1.1.399,1.1.1.95,4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000006777 218.0
YHH3_k127_4805379_11 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000000000000000000001744 201.0
YHH3_k127_4805379_12 SH3 domain - - - 0.00000000000000000000000000000000000000000000000000003372 190.0
YHH3_k127_4805379_13 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.000000000000000000000000000000000000000000000000001264 188.0
YHH3_k127_4805379_14 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000000000000000001097 180.0
YHH3_k127_4805379_16 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.0000000000000000000000000000000000000000272 155.0
YHH3_k127_4805379_17 - - - - 0.00000000000000000000000000000000000001817 149.0
YHH3_k127_4805379_18 Phosphoglycerate mutase family K02226,K22306 - 3.1.3.73,3.1.3.85 0.0000000000000000000000000000000001297 140.0
YHH3_k127_4805379_19 Protein of unknown function DUF45 K07043 - - 0.0000000000000000000000000000000003686 140.0
YHH3_k127_4805379_2 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 6.312e-207 652.0
YHH3_k127_4805379_20 PFAM RNA recognition motif - - - 0.000000000000000000000000000002219 122.0
YHH3_k127_4805379_21 - - - - 0.0000000000000009649 81.0
YHH3_k127_4805379_22 PFAM RNP-1 like RNA-binding protein - - - 0.00000000000002406 76.0
YHH3_k127_4805379_3 - - - - 6.645e-197 622.0
YHH3_k127_4805379_4 Sulfite exporter TauE/SafE K07090 - - 7.878e-194 614.0
YHH3_k127_4805379_5 Belongs to the RtcB family K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 551.0
YHH3_k127_4805379_6 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 414.0
YHH3_k127_4805379_7 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 362.0
YHH3_k127_4805379_8 PfkB domain protein K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001257 284.0
YHH3_k127_4805379_9 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000438 267.0
YHH3_k127_4852991_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 3.741e-196 616.0
YHH3_k127_4852991_1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000003366 177.0
YHH3_k127_4852991_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000002548 66.0
YHH3_k127_4957251_0 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 602.0
YHH3_k127_4957251_1 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 501.0
YHH3_k127_4957251_2 PFAM Histone deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 439.0
YHH3_k127_4957251_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000942 316.0
YHH3_k127_4957251_4 PFAM Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006394 309.0
YHH3_k127_4957251_5 PFAM DsrE DsrF-like family - - - 0.00000000000000000000000000000000000000000000001378 173.0
YHH3_k127_4957251_6 PFAM 5-formyltetrahydrofolate cyclo-ligase K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000000001843 177.0
YHH3_k127_4957251_7 Belongs to the sulfur carrier protein TusA family K04085 - - 0.00000000000000000000000000000000000000000809 154.0
YHH3_k127_4957251_8 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000002218 110.0
YHH3_k127_4964910_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 1.208e-295 923.0
YHH3_k127_4964910_1 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 3.831e-236 740.0
YHH3_k127_4964910_2 PFAM PSP1 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 344.0
YHH3_k127_4964910_3 TIGRFAM DNA polymerase III, delta K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 290.0
YHH3_k127_4964910_4 nucleic acid binding OB-fold tRNA helicase-type K03698 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003434 263.0
YHH3_k127_4964910_5 YGGT family K02221 - - 0.00000000000000000000000000000000000001385 145.0
YHH3_k127_4964910_6 membrane - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000006499 148.0
YHH3_k127_4964910_7 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000007241 138.0
YHH3_k127_4964910_8 - - - - 0.00000000000000000000000000292 115.0
YHH3_k127_4964910_9 Belongs to the UPF0235 family K09131 - - 0.00000000000000000000000000895 115.0
YHH3_k127_499379_0 Belongs to the glutamate synthase family K00265 - 1.4.1.13,1.4.1.14 0.0 1032.0
YHH3_k127_499379_1 PFAM Pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1006.0
YHH3_k127_499379_2 glutamate synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000001982 239.0
YHH3_k127_499379_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0001416 44.0
YHH3_k127_5066094_0 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01945 - 6.3.4.13 7.143e-261 816.0
YHH3_k127_5066094_1 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 522.0
YHH3_k127_5066094_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 516.0
YHH3_k127_5066094_3 Tetracycline transcriptional regulator YsiA domain protein K13770 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 283.0
YHH3_k127_5066094_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004016 254.0
YHH3_k127_5066094_5 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000001658 192.0
YHH3_k127_5066094_6 PFAM Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000007916 156.0
YHH3_k127_5066094_7 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009314,GO:0009380,GO:0009628,GO:0032991,GO:0042802,GO:0044424,GO:0044464,GO:0050896,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.00000000000008635 71.0
YHH3_k127_5094689_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 6.293e-281 872.0
YHH3_k127_5094689_1 PFAM pentapeptide repeat protein - - - 0.000000000000001142 80.0
YHH3_k127_5115267_0 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 4.216e-215 696.0
YHH3_k127_5115267_1 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 613.0
YHH3_k127_5115267_10 Type II secretory pathway component ExeA K12283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007675 320.0
YHH3_k127_5115267_11 LysE type translocator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 289.0
YHH3_k127_5115267_12 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001652 282.0
YHH3_k127_5115267_13 - K08086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001391 299.0
YHH3_k127_5115267_14 Roadblock/LC7 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004914 244.0
YHH3_k127_5115267_15 PFAM Silent information regulator protein Sir2 K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000006963 233.0
YHH3_k127_5115267_16 PFAM peptidase M28 - - - 0.0000000000000000000000000000000000000000000000000000001287 199.0
YHH3_k127_5115267_18 Rhodanese-like domain - - - 0.00000000000000000000000002717 115.0
YHH3_k127_5115267_19 phosphorelay signal transduction system - - - 0.00000000000000000000002182 102.0
YHH3_k127_5115267_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 569.0
YHH3_k127_5115267_20 HAMP domain - - - 0.00000000000000000006258 92.0
YHH3_k127_5115267_3 PFAM Binding-protein-dependent transport system inner membrane component K13895 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 558.0
YHH3_k127_5115267_4 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 561.0
YHH3_k127_5115267_5 PFAM Binding-protein-dependent transport system inner membrane component K13894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 552.0
YHH3_k127_5115267_6 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 438.0
YHH3_k127_5115267_7 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 389.0
YHH3_k127_5115267_8 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 376.0
YHH3_k127_5115267_9 Gtr1/RagA G protein conserved region K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 362.0
YHH3_k127_5141526_0 PFAM ATP-binding region, ATPase domain protein K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008685 545.0
YHH3_k127_5141526_1 COG0798 Arsenite efflux pump ACR3 and related K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 462.0
YHH3_k127_5141526_2 - K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006195 288.0
YHH3_k127_5141526_3 PFAM Protein-tyrosine phosphatase, low molecular weight K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000000003369 219.0
YHH3_k127_5141526_4 Peptidase inhibitor I9 - - - 0.0000000000000000000000000000000000000000000000000000000000008578 226.0
YHH3_k127_5141526_5 AMP binding - - - 0.0000000000000000000000000000000000000000000007053 177.0
YHH3_k127_5141526_6 PFAM regulatory protein, ArsR K03892 - - 0.0000000000000000000000000000047 126.0
YHH3_k127_5141526_7 Belongs to the sulfur carrier protein TusA family - - - 0.0000000000000000000000001832 107.0
YHH3_k127_5212072_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009144 383.0
YHH3_k127_5212072_1 4Fe-4S dicluster domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002481 250.0
YHH3_k127_5212800_0 TIGRFAM alpha-glucan K00688 - 2.4.1.1 1.535e-310 966.0
YHH3_k127_5212800_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006931 578.0
YHH3_k127_5212800_10 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000004423 233.0
YHH3_k127_5212800_11 Belongs to the Fur family K03711,K09825 - - 0.00000000000000000000000000000000000000000000000000000000000000007305 226.0
YHH3_k127_5212800_12 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000000000000000000000000005947 211.0
YHH3_k127_5212800_13 ROS/MUCR transcriptional regulator protein - - - 0.0000000000000000000000000000000000000000000000000000000002284 205.0
YHH3_k127_5212800_14 - - - - 0.0000000000000000000000000000000000000000000000000002684 188.0
YHH3_k127_5212800_15 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000000000003739 149.0
YHH3_k127_5212800_16 Belongs to the UPF0296 family K09777 - - 0.0000000000000000000000000000000000009979 141.0
YHH3_k127_5212800_17 PFAM Outer membrane K06142 - - 0.0000000000000000000000000000002379 130.0
YHH3_k127_5212800_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007577 546.0
YHH3_k127_5212800_3 PFAM RNA binding S1 domain protein K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 485.0
YHH3_k127_5212800_4 Bifunctional protein K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 427.0
YHH3_k127_5212800_5 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 367.0
YHH3_k127_5212800_6 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000425 339.0
YHH3_k127_5212800_7 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 337.0
YHH3_k127_5212800_8 Domain of unknown function (DUF3786) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002328 273.0
YHH3_k127_5212800_9 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000002574 268.0
YHH3_k127_5246113_0 PFAM SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000868 627.0
YHH3_k127_5246113_1 PFAM nickel-dependent hydrogenase large subunit K00436,K14126 - 1.12.1.2,1.8.98.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 605.0
YHH3_k127_5246113_10 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000001346 222.0
YHH3_k127_5246113_11 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.000000000000000000000000000000000000000001092 162.0
YHH3_k127_5246113_12 Dioxygenase K00449 - 1.13.11.3 0.00000000000000000000000000000003977 134.0
YHH3_k127_5246113_13 PFAM thioesterase superfamily protein - - - 0.00000005289 55.0
YHH3_k127_5246113_2 Mycolic acid cyclopropane synthetase K00574,K20238 - 2.1.1.317,2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 524.0
YHH3_k127_5246113_3 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 474.0
YHH3_k127_5246113_4 Oxidoreductase FAD-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 444.0
YHH3_k127_5246113_5 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 430.0
YHH3_k127_5246113_6 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 447.0
YHH3_k127_5246113_7 NADH ubiquinone oxidoreductase 20 kDa subunit K14128 - 1.8.98.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 399.0
YHH3_k127_5246113_8 Protein of unknown function (DUF541) K09797 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 313.0
YHH3_k127_5246113_9 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000015 231.0
YHH3_k127_5260792_0 TIGRFAM molybdenum cofactor synthesis domain K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005093 511.0
YHH3_k127_5260792_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005178 399.0
YHH3_k127_5260792_2 - - - - 0.00000000000000000000000000000000000000004755 156.0
YHH3_k127_5260792_4 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000002218 124.0
YHH3_k127_5260792_5 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 0.0000000000339 65.0
YHH3_k127_5334760_0 PFAM homoserine dehydrogenase K00003 - 1.1.1.3 5.206e-203 639.0
YHH3_k127_5334760_1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 485.0
YHH3_k127_5334760_2 peptidyl-lysine modification to peptidyl-hypusine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000878 461.0
YHH3_k127_5334760_3 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 398.0
YHH3_k127_5334760_4 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007304 284.0
YHH3_k127_5334760_5 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000008056 258.0
YHH3_k127_5334760_6 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000000000000000000006023 187.0
YHH3_k127_5334760_7 Stf0 sulphotransferase - - - 0.0000000002054 70.0
YHH3_k127_5355247_0 PFAM Carbamoyltransferase K00612 - - 1.11e-289 900.0
YHH3_k127_5355247_1 epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101 568.0
YHH3_k127_5355247_2 O-acyltransferase activity K00661,K21379 - 2.3.1.209,2.3.1.79 0.00000000000000000000000000000000000000000000000324 183.0
YHH3_k127_5355247_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000004275 110.0
YHH3_k127_5397965_0 cysteinyl-tRNA synthetase K01738,K01883,K12339 - 2.5.1.47,6.1.1.16 0.0 1162.0
YHH3_k127_5397965_1 Elongation factor Tu domain 2 K06207 - - 0.0 1000.0
YHH3_k127_5397965_10 Dicarboxylate transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000001466 265.0
YHH3_k127_5397965_11 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000004878 219.0
YHH3_k127_5397965_12 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000005341 225.0
YHH3_k127_5397965_14 Bacterial capsule synthesis protein PGA_cap - - - 0.00000000000000000000000000000000000000000000000000000000006977 233.0
YHH3_k127_5397965_15 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000001087 207.0
YHH3_k127_5397965_16 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000119 193.0
YHH3_k127_5397965_17 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.00000000000000000000000000000000000000000000000000001622 189.0
YHH3_k127_5397965_18 peptidyl-proline hydroxylation to 4-hydroxy-L-proline - - - 0.00000000000000000000000000000000000000000004293 185.0
YHH3_k127_5397965_19 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000001316 157.0
YHH3_k127_5397965_2 LapD/MoxY periplasmic domain - - - 9.285e-233 737.0
YHH3_k127_5397965_20 - - - - 0.0000000000000000000000000000000000001492 145.0
YHH3_k127_5397965_21 - - - - 0.00000000000000000000000000000000007581 147.0
YHH3_k127_5397965_22 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000002468 140.0
YHH3_k127_5397965_25 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.000000000000000000003761 99.0
YHH3_k127_5397965_26 Protein of unknown function (DUF1318) K09978 - - 0.00000000000000000001939 97.0
YHH3_k127_5397965_27 Class III cytochrome C family - - - 0.000000000003304 75.0
YHH3_k127_5397965_29 - - - - 0.00000001633 57.0
YHH3_k127_5397965_3 ABC transporter transmembrane region K12541 - - 1.696e-231 737.0
YHH3_k127_5397965_4 type III restriction protein res subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000625 552.0
YHH3_k127_5397965_5 TIGRFAM type I secretion membrane fusion protein, HlyD family K12542 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 534.0
YHH3_k127_5397965_6 PFAM Outer membrane efflux protein K12543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000605 458.0
YHH3_k127_5397965_7 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003742 352.0
YHH3_k127_5397965_8 AsmA-like C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005028 294.0
YHH3_k127_5397965_9 PFAM transglutaminase family protein cysteine peptidase BTLCP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008521 263.0
YHH3_k127_547299_0 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 0.0 1049.0
YHH3_k127_547299_1 PFAM malic K00027,K00029 - 1.1.1.38,1.1.1.40 7.925e-277 860.0
YHH3_k127_547299_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 328.0
YHH3_k127_547299_11 PFAM ABC transporter related K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 306.0
YHH3_k127_547299_13 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001027 282.0
YHH3_k127_547299_14 Nucleotidyl transferase K00966 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000002298 271.0
YHH3_k127_547299_15 Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003,K05685 - - 0.000000000000000000000000000000000000000000000000000000162 201.0
YHH3_k127_547299_16 response regulator K15012 - - 0.000000000000000000000000000000000000000000001505 167.0
YHH3_k127_547299_17 PFAM NosL family protein - - - 0.00000000000000000000000000000000000000000005152 167.0
YHH3_k127_547299_18 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000001952 164.0
YHH3_k127_547299_19 Universal stress protein family - - - 0.00000000000000000000001067 107.0
YHH3_k127_547299_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K01663,K02500 - - 6.371e-263 818.0
YHH3_k127_547299_20 - - - - 0.00000000000000000000005998 102.0
YHH3_k127_547299_22 PhoQ Sensor - - - 0.00000001794 65.0
YHH3_k127_547299_3 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 5.359e-201 645.0
YHH3_k127_547299_4 NapC/NirT cytochrome c family, N-terminal region - GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0044237,GO:0044425,GO:0045333,GO:0055114 - 1.913e-200 636.0
YHH3_k127_547299_5 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 489.0
YHH3_k127_547299_6 NapC/NirT cytochrome c family, N-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008478 474.0
YHH3_k127_547299_7 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 461.0
YHH3_k127_547299_8 TIGRFAM TRAP transporter solute receptor, TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000376 437.0
YHH3_k127_547299_9 PFAM Response regulator receiver domain K02481,K07712,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005212 398.0
YHH3_k127_5478361_0 TIGRFAM Pyridine nucleotide-disulfide oxidoreductase family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 445.0
YHH3_k127_5478361_1 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 312.0
YHH3_k127_5520046_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 6.77e-292 904.0
YHH3_k127_5520046_1 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007604 301.0
YHH3_k127_5520046_2 Domain of unknown function (DUF374) K09778 - - 0.000000000000000000000000000000000000000000000000000002713 201.0
YHH3_k127_5606209_0 amine dehydrogenase activity - - - 1.885e-255 816.0
YHH3_k127_5606209_1 Methyltransferase - - - 0.00000000000000000000000000006835 122.0
YHH3_k127_5632431_0 PFAM Pyruvate phosphate dikinase, PEP pyruvate-binding K01007 - 2.7.9.2 2.243e-217 706.0
YHH3_k127_5632431_1 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004359 477.0
YHH3_k127_5632431_2 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003982 453.0
YHH3_k127_5632431_3 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000004406 187.0
YHH3_k127_5632431_4 Putative transmembrane protein (Alph_Pro_TM) - - - 0.000000000000000000000000000000000000000000001842 174.0
YHH3_k127_5632431_5 Bacterial regulatory protein, Fis family K07713 - - 0.00000000000000000000000000000004647 128.0
YHH3_k127_5632431_6 - - - - 0.00000000000000001104 93.0
YHH3_k127_5649079_0 SNF2 family N-terminal domain - - - 0.0 1853.0
YHH3_k127_5649079_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 586.0
YHH3_k127_5649079_2 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 576.0
YHH3_k127_5649079_3 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 573.0
YHH3_k127_5649079_4 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 445.0
YHH3_k127_5649079_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006927 385.0
YHH3_k127_5649079_6 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000004265 231.0
YHH3_k127_5649079_7 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000004568 156.0
YHH3_k127_5649079_8 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000002072 150.0
YHH3_k127_5649079_9 - - - - 0.00000000000000000000000000000000003935 154.0
YHH3_k127_5653295_0 transposase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003215 509.0
YHH3_k127_5653295_1 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00000000002646 71.0
YHH3_k127_5702857_0 Proton-conducting membrane transporter - - - 0.00000000000000000000000000000000000000000000000000000000000001314 222.0
YHH3_k127_5702857_1 PFAM Na H antiporter MnhB subunit-related protein - - - 0.00000000000000000000000000000000000000000000000001245 186.0
YHH3_k127_5702857_2 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K05567 - - 0.0000000000000000000000002247 111.0
YHH3_k127_5744245_0 peptidyl-prolyl cis-trans isomerase K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 324.0
YHH3_k127_5744245_1 Protein conserved in bacteria K15539 - - 0.0000000000000000000000001637 115.0
YHH3_k127_5778820_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 8.708e-224 700.0
YHH3_k127_5778820_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 3.615e-202 636.0
YHH3_k127_5778820_2 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004681 416.0
YHH3_k127_5778820_3 Thioesterase K07107 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 283.0
YHH3_k127_5778820_4 PFAM Glycosyltransferase family 25 (LPS biosynthesis protein) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005311 261.0
YHH3_k127_5778820_5 Polyketide synthase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000142 248.0
YHH3_k127_5778820_6 MMPL family K07003 - - 0.00000000000000000000000000000000000000000000000000000001143 206.0
YHH3_k127_5778820_7 - - - - 0.000000000000000000000000000000000000000007694 157.0
YHH3_k127_5874389_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1194.0
YHH3_k127_5874389_1 CDP-archaeol synthase K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 533.0
YHH3_k127_5874389_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000001971 237.0
YHH3_k127_5880803_0 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 396.0
YHH3_k127_5880803_1 PFAM ribonuclease II K01147,K12573 - 3.1.13.1 0.000000000000000000000000000000000000000000000000000000000000000000001033 250.0
YHH3_k127_5880803_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07239 - - 0.00000000000000000000000000000000000000002061 156.0
YHH3_k127_5909751_0 PFAM Na H antiporter subunit K05571 - - 0.00000000000000000000000000000000005057 136.0
YHH3_k127_5909751_1 Cation antiporter K05569 - - 0.000000000000000000000000000009443 126.0
YHH3_k127_5909751_2 Domain of unknown function (DUF4040) - - - 0.00000000000000000000000002241 116.0
YHH3_k127_5909751_3 RNA 3'-terminal phosphate cyclase (RTC), insert domain K01974 - 6.5.1.4 0.0000000000000000000000004558 110.0
YHH3_k127_5909751_4 Multiple resistance and pH regulation protein F (MrpF / PhaF) K05570 - - 0.00000000000000000000004912 100.0
YHH3_k127_5942633_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1621.0
YHH3_k127_5942633_1 Belongs to the methyltransferase superfamily K07444,K12297 - 2.1.1.173,2.1.1.264 1.768e-235 751.0
YHH3_k127_5942633_10 Transposase IS4 family - - - 0.000000000000000000000000000000000000000000000000000000001661 207.0
YHH3_k127_5942633_11 NUDIX domain K01823 - 5.3.3.2 0.0000000000000000000000000000000000000000000000000000005392 198.0
YHH3_k127_5942633_12 domain, Protein - - - 0.00000000000000000000000000000000000000000000221 173.0
YHH3_k127_5942633_13 PFAM Glycoside hydrolase, family 13 - - - 0.00000000000000000000000000000239 125.0
YHH3_k127_5942633_14 Integrase core domain K07497 - - 0.000000000000000000000000009597 110.0
YHH3_k127_5942633_16 FecR protein - - - 0.0000000000002525 79.0
YHH3_k127_5942633_17 Phosphopantetheine attachment site - - - 0.00000000007678 66.0
YHH3_k127_5942633_18 Predicted membrane protein (DUF2254) - - - 0.000000001966 58.0
YHH3_k127_5942633_19 Rhodopirellula transposase DDE domain - - - 0.0002429 45.0
YHH3_k127_5942633_2 Amino acid adenylation domain K02364 - 6.3.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 580.0
YHH3_k127_5942633_3 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 318.0
YHH3_k127_5942633_4 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008505 299.0
YHH3_k127_5942633_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 292.0
YHH3_k127_5942633_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002803 278.0
YHH3_k127_5942633_7 Membrane protein involved in D-alanine export - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007602 287.0
YHH3_k127_5942633_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002845 251.0
YHH3_k127_5942633_9 TIGRFAM 6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000002899 227.0
YHH3_k127_598077_0 pfam abc-1 K03688 - - 2.077e-241 758.0
YHH3_k127_598077_1 phosphorelay sensor kinase activity K07709,K07710 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 379.0
YHH3_k127_598077_2 L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 302.0
YHH3_k127_598077_3 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008413 245.0
YHH3_k127_598077_4 Flavodoxin domain - - - 0.0000000000000000000000000000000000000000000000000006659 190.0
YHH3_k127_598077_5 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000001715 145.0
YHH3_k127_598077_6 - - - - 0.00000000000000000000000001823 113.0
YHH3_k127_598077_7 granule-associated protein - - - 0.0000000000000000000000476 102.0
YHH3_k127_6001112_0 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004029 247.0
YHH3_k127_6001112_1 translation initiation factor activity K02237,K03497,K12065 - - 0.00000000000000000000000000000000000000000000000000000001034 211.0
YHH3_k127_6001112_2 PFAM Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.0000001229 53.0
YHH3_k127_6053870_0 self proteolysis - - - 0.0000000000000000000000000000000000000000557 158.0
YHH3_k127_6053870_1 Putative metal-binding motif - - - 0.000000000000000000000000007412 121.0
YHH3_k127_6086729_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1246.0
YHH3_k127_6086729_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1037.0
YHH3_k127_6086729_10 Predicted membrane protein (DUF2232) - - - 0.0000000000000000000000000000000000000000000000000001413 198.0
YHH3_k127_6086729_11 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.0000000000000000000000000000000000000000000009207 171.0
YHH3_k127_6086729_12 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000238 162.0
YHH3_k127_6086729_13 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000008671 158.0
YHH3_k127_6086729_14 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000001197 157.0
YHH3_k127_6086729_15 Phosphoribosyl-ATP pyrophosphohydrolase K02499,K04765 - 3.6.1.9 0.0000000000000000000000000000000004021 135.0
YHH3_k127_6086729_16 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000001281 121.0
YHH3_k127_6086729_18 - - - - 0.0000000000000000000008921 96.0
YHH3_k127_6086729_2 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 3.665e-284 886.0
YHH3_k127_6086729_3 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 5.47e-220 691.0
YHH3_k127_6086729_4 Alanine dehydrogenase/PNT, C-terminal domain K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 576.0
YHH3_k127_6086729_5 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005995 544.0
YHH3_k127_6086729_6 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007406 498.0
YHH3_k127_6086729_7 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007097 380.0
YHH3_k127_6086729_8 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000001982 241.0
YHH3_k127_6086729_9 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000000000002489 200.0
YHH3_k127_6090900_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 2.165e-226 738.0
YHH3_k127_6090900_1 PAS domain containing protein K07315 - 3.1.3.3 1.838e-196 646.0
YHH3_k127_6090900_2 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582 GO:0000166,GO:0000724,GO:0000725,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008854,GO:0009314,GO:0009338,GO:0009628,GO:0009987,GO:0015616,GO:0016043,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017076,GO:0017111,GO:0030554,GO:0032392,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044355,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0099046,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 368.0
YHH3_k127_62299_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K15792 - 6.3.2.10,6.3.2.13 1.855e-291 926.0
YHH3_k127_62299_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation - - - 3.273e-266 829.0
YHH3_k127_62299_10 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007272 473.0
YHH3_k127_62299_11 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008835 394.0
YHH3_k127_62299_12 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 404.0
YHH3_k127_62299_13 hydro-lyase, Fe-S type, tartrate fumarate subfamily, alpha subunit K01677 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006124 364.0
YHH3_k127_62299_14 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 361.0
YHH3_k127_62299_15 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007478 337.0
YHH3_k127_62299_16 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006671 358.0
YHH3_k127_62299_17 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000658 310.0
YHH3_k127_62299_18 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 317.0
YHH3_k127_62299_19 penicillin binding K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 316.0
YHH3_k127_62299_2 PFAM Radical SAM - - - 2.364e-215 683.0
YHH3_k127_62299_20 Hydro-lyase, Fe-S type, tartrate fumarate subfamily, beta subunit K01678 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002058 274.0
YHH3_k127_62299_21 TIGRFAM histidinol phosphate phosphatase HisJ family K04486 - 3.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000571 275.0
YHH3_k127_62299_22 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005573 276.0
YHH3_k127_62299_23 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000002376 257.0
YHH3_k127_62299_24 CGGC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002939 247.0
YHH3_k127_62299_25 Essential cell division protein K03589 - - 0.0000000000000000000000000000000000000000000000000000008861 203.0
YHH3_k127_62299_26 Menaquinol oxidoreductase complex Cbc4, cytochrome c subunit - - - 0.000000000000000000000000000000000000000000000000000004591 194.0
YHH3_k127_62299_27 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.0000000000000000000000000000000000000000000000002316 180.0
YHH3_k127_62299_28 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.00000000000000000000000000000000000000000005043 165.0
YHH3_k127_62299_29 Uncharacterized ACR, COG1993 K06199,K09137 - - 0.00000000000000000000000000000000000002137 149.0
YHH3_k127_62299_3 Belongs to the MurCDEF family K01924 - 6.3.2.8 2.035e-210 662.0
YHH3_k127_62299_4 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 5.998e-208 652.0
YHH3_k127_62299_5 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 582.0
YHH3_k127_62299_6 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 579.0
YHH3_k127_62299_7 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 567.0
YHH3_k127_62299_8 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 539.0
YHH3_k127_62299_9 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 537.0
YHH3_k127_627932_0 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000000000000000000000000000000000000000000000000000000000001044 240.0
YHH3_k127_627932_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001756 242.0
YHH3_k127_627932_2 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000001561 81.0
YHH3_k127_6339812_0 Hydantoinase oxoprolinase N-terminal region K01469 - 3.5.2.9 0.0 1429.0
YHH3_k127_6339812_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 324.0
YHH3_k127_6339812_2 PFAM Metal-dependent phosphohydrolase, HD K06951 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000402 248.0
YHH3_k127_6339812_3 Inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000006589 244.0
YHH3_k127_6339812_4 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000001807 153.0
YHH3_k127_6339812_5 nuclease activity K06218 - - 0.000000000000000000791 89.0
YHH3_k127_6393675_0 glutamate synthase alpha subunit K00265 - 1.4.1.13,1.4.1.14 0.0 1843.0
YHH3_k127_6393675_1 Sigma-54 interaction domain K07714,K07715 - - 1.185e-196 621.0
YHH3_k127_6393675_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007687 514.0
YHH3_k127_6393675_3 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004734 337.0
YHH3_k127_6393675_5 PFAM zinc finger, DksA TraR C4-type K06204 - - 0.00000000564 65.0
YHH3_k127_64167_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 8.495e-207 654.0
YHH3_k127_64167_1 general secretion pathway protein K02457,K02458,K10926,K10930,K10931 GO:0003674,GO:0005198,GO:0005575,GO:0005623,GO:0008150,GO:0009289,GO:0009405,GO:0009987,GO:0016043,GO:0030030,GO:0042995,GO:0044419,GO:0044464,GO:0051704,GO:0071840 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000735 485.0
YHH3_k127_64167_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005754 438.0
YHH3_k127_64167_3 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008161 308.0
YHH3_k127_64167_4 general secretion pathway protein G K02456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001221 247.0
YHH3_k127_64167_5 Pentapeptide repeats (8 copies) - - - 0.00000000000000000000000000000000000000000000000000000188 210.0
YHH3_k127_64167_6 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000000000004748 121.0
YHH3_k127_64167_7 Prokaryotic N-terminal methylation motif K02457 - - 0.000000000000000000002781 100.0
YHH3_k127_64167_8 Belongs to the UPF0434 family K09791 - - 0.0000000000000000004564 90.0
YHH3_k127_64167_9 Mechanosensitive ion channel K03442 - - 0.000000000000001621 81.0
YHH3_k127_6471797_0 Carbamoyl-phosphate synthetase large chain oligomerisation K01955 - 6.3.5.5 0.0 1781.0
YHH3_k127_6471797_1 - - - - 0.0 1543.0
YHH3_k127_6471797_10 Protein of unknown function (DUF1566) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003114 267.0
YHH3_k127_6471797_11 UPF0056 inner membrane protein K05595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003485 269.0
YHH3_k127_6471797_12 guanyl-nucleotide exchange factor activity K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000109 286.0
YHH3_k127_6471797_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000000008789 236.0
YHH3_k127_6471797_14 Lrp/AsnC ligand binding domain - - - 0.000000000000000000000000000000001001 133.0
YHH3_k127_6471797_15 - - - - 0.0000000000000000000001033 104.0
YHH3_k127_6471797_16 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000001362 101.0
YHH3_k127_6471797_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1001.0
YHH3_k127_6471797_3 Belongs to the CarA family K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 586.0
YHH3_k127_6471797_4 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K01802 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 456.0
YHH3_k127_6471797_5 PLD-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007685 447.0
YHH3_k127_6471797_6 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007074 328.0
YHH3_k127_6471797_7 PFAM Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008157 305.0
YHH3_k127_6471797_8 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 292.0
YHH3_k127_6471797_9 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007561 292.0
YHH3_k127_6478132_0 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 448.0
YHH3_k127_6478132_1 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 438.0
YHH3_k127_6478132_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008937 332.0
YHH3_k127_6478132_3 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005095 258.0
YHH3_k127_6478132_4 SCO1 SenC K07152 - - 0.0000000000000000000000000000000000000000000000000000005308 198.0
YHH3_k127_6478132_5 - - - - 0.0000000000000000001539 92.0
YHH3_k127_6512309_0 Fad linked oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000663 537.0
YHH3_k127_6512309_1 Short-chain dehydrogenase reductase (SDR) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 319.0
YHH3_k127_6512309_2 TPR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000472 232.0
YHH3_k127_6512309_3 Acid phosphatase vanadium-dependent haloperoxidase related K09775 - - 0.0000000000000000000000000000000000000000000001833 171.0
YHH3_k127_6512309_4 Tetratricopeptide repeat - - - 0.000000000000000002641 88.0
YHH3_k127_6523495_0 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000003185 210.0
YHH3_k127_6523495_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000839 189.0
YHH3_k127_6551004_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 4.573e-240 761.0
YHH3_k127_6677878_0 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 599.0
YHH3_k127_6677878_1 PFAM Bile acid sodium symporter K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 507.0
YHH3_k127_6677878_2 Nitrite/Sulfite reductase ferredoxin-like half domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 305.0
YHH3_k127_6677878_3 phosphate ion binding K02040 - - 0.0000000000000000000000000000000000000000000000000000000000003365 221.0
YHH3_k127_6677878_4 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000001486 148.0
YHH3_k127_6677878_6 sequence-specific DNA binding - - - 0.00000004199 57.0
YHH3_k127_6677878_7 Domain of unknown function (DUF5060) - - - 0.000003333 59.0
YHH3_k127_6677878_8 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000004197 58.0
YHH3_k127_6690183_0 DinB superfamily K18912 - 1.14.99.50 1.015e-272 852.0
YHH3_k127_6690183_1 Aminotransferase, class I K14155 - 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 319.0
YHH3_k127_6694961_0 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 415.0
YHH3_k127_6694961_1 metal cluster binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002097 289.0
YHH3_k127_6694961_2 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000003646 252.0
YHH3_k127_6694961_3 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000009433 243.0
YHH3_k127_6694961_4 Heat shock protein DnaJ domain protein K06203,K07126 - - 0.0000000000000000000000000000000003491 135.0
YHH3_k127_6694961_5 Outer membrane efflux protein - - - 0.000003426 52.0
YHH3_k127_6729517_0 PFAM Tetratricopeptide - - - 0.0000000000000000000000000000009415 136.0
YHH3_k127_6729517_1 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000003485 123.0
YHH3_k127_6729517_2 PFAM Tetratricopeptide - - - 0.000009598 49.0
YHH3_k127_6847181_0 UvrD REP helicase K03657 - 3.6.4.12 1.529e-301 941.0
YHH3_k127_6847181_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 3.287e-255 813.0
YHH3_k127_6847181_10 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535,K13599 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004426 452.0
YHH3_k127_6847181_11 PFAM oxidoreductase domain protein K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006035 449.0
YHH3_k127_6847181_12 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 449.0
YHH3_k127_6847181_13 Phosphate transport regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 454.0
YHH3_k127_6847181_14 ATPase associated with various cellular activities AAA_5 K04748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006001 419.0
YHH3_k127_6847181_15 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 429.0
YHH3_k127_6847181_16 PFAM Outer membrane protein transport protein (OMPP1 FadL TodX) K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009926 401.0
YHH3_k127_6847181_17 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 405.0
YHH3_k127_6847181_18 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003957 382.0
YHH3_k127_6847181_19 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 376.0
YHH3_k127_6847181_2 response regulator receiver K02481 - - 8.219e-237 738.0
YHH3_k127_6847181_20 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006842 377.0
YHH3_k127_6847181_21 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 400.0
YHH3_k127_6847181_22 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 369.0
YHH3_k127_6847181_23 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009207 362.0
YHH3_k127_6847181_24 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 345.0
YHH3_k127_6847181_25 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005256 342.0
YHH3_k127_6847181_26 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 329.0
YHH3_k127_6847181_27 Histidinol phosphatase and related hydrolases of the PHP family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 334.0
YHH3_k127_6847181_28 PFAM Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 308.0
YHH3_k127_6847181_29 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 310.0
YHH3_k127_6847181_3 Von Willebrand factor type A K02448 - - 1.195e-223 716.0
YHH3_k127_6847181_30 PFAM aminoglycoside phosphotransferase K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000385 286.0
YHH3_k127_6847181_31 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000101 282.0
YHH3_k127_6847181_32 PFAM response regulator receiver K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006748 272.0
YHH3_k127_6847181_33 molybdopterin-guanine dinucleotide biosynthesis protein K03753,K13818 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 2.7.7.77 0.0000000000000000000000000000000000000000000000000000000000000002152 228.0
YHH3_k127_6847181_34 membrane - - - 0.00000000000000000000000000000000000000000000000000000000006258 210.0
YHH3_k127_6847181_35 Protein of unknown function (DUF401) K09133 - - 0.00000000000000000000000000000000000000000000000000003962 203.0
YHH3_k127_6847181_36 TIGRFAM thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000001272 175.0
YHH3_k127_6847181_37 - - - - 0.000000000000000000000000000000000000000000002627 167.0
YHH3_k127_6847181_38 PFAM HNH endonuclease K07451 - - 0.000000000000000000000000000000000000000002729 158.0
YHH3_k127_6847181_39 Domain of unknown function (DUF4388) K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000007041 171.0
YHH3_k127_6847181_4 PFAM Glycosyl transferase family 2 - - - 2.22e-217 689.0
YHH3_k127_6847181_41 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000000000000000000000000002158 135.0
YHH3_k127_6847181_42 Smr domain - - - 0.0000000000000000000000000000001079 126.0
YHH3_k127_6847181_43 CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator - - - 0.0000000000000000000000187 110.0
YHH3_k127_6847181_44 Protein of unknown function (DUF493) K09158 - - 0.00000000000000001522 86.0
YHH3_k127_6847181_5 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007211 552.0
YHH3_k127_6847181_6 Methylene-tetrahydrofolate reductase C terminal K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 530.0
YHH3_k127_6847181_7 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 522.0
YHH3_k127_6847181_8 type IV pilus assembly PilZ - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004807 499.0
YHH3_k127_6847181_9 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009178 472.0
YHH3_k127_6900423_0 AMP-binding enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 391.0
YHH3_k127_6900423_1 TIGRFAM N-acetyl sugar amidotransferase - - - 0.0000000000000000000000000000006502 126.0
YHH3_k127_6900423_2 Phosphopantetheine attachment site - - - 0.000000000000000000000003229 104.0
YHH3_k127_6950953_0 PHP domain protein - - - 0.0 1101.0
YHH3_k127_6950953_1 Histidine kinase - - - 0.0 1041.0
YHH3_k127_6950953_10 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 295.0
YHH3_k127_6950953_11 Hsp20/alpha crystallin family K13993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006881 267.0
YHH3_k127_6950953_12 PFAM Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006657 252.0
YHH3_k127_6950953_13 DnaJ molecular chaperone homology domain K03686 - - 0.00000000000000000000000000000000000000000000000000009434 194.0
YHH3_k127_6950953_14 Hsp20/alpha crystallin family K13993 - - 0.000000000000000000000000000000000000000000000000000552 187.0
YHH3_k127_6950953_16 Belongs to the small heat shock protein (HSP20) family - - - 0.0000000000000000000000000000000000000000000009306 168.0
YHH3_k127_6950953_17 response regulator receiver - - - 0.00000000000000000000000000000000000000000000215 171.0
YHH3_k127_6950953_18 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000001187 167.0
YHH3_k127_6950953_19 - - - - 0.000000000000000000000000000000000000000732 151.0
YHH3_k127_6950953_2 ABC transporter K06020 - 3.6.3.25 8.675e-308 949.0
YHH3_k127_6950953_20 - - - - 0.0000000000000000000000000000477 123.0
YHH3_k127_6950953_21 Protein of unknown function (DUF504) - - - 0.0000000000000000000000000003105 117.0
YHH3_k127_6950953_23 - - - - 0.00000003855 57.0
YHH3_k127_6950953_3 Belongs to the peptidase S16 family - - - 5.949e-229 734.0
YHH3_k127_6950953_4 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 1.228e-201 647.0
YHH3_k127_6950953_5 DNA polymerase III K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 495.0
YHH3_k127_6950953_6 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0071704,GO:1901135,GO:1901576 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006913 452.0
YHH3_k127_6950953_7 PFAM phosphoesterase RecJ domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 416.0
YHH3_k127_6950953_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 345.0
YHH3_k127_6950953_9 NADPH quinone reductase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008321 297.0
YHH3_k127_699941_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1102.0
YHH3_k127_699941_1 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 9.439e-300 933.0
YHH3_k127_699941_10 Protein conserved in bacteria - - - 0.000001064 52.0
YHH3_k127_699941_2 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 9.259e-288 893.0
YHH3_k127_699941_3 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 531.0
YHH3_k127_699941_4 Belongs to the 'phage' integrase family K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 440.0
YHH3_k127_699941_5 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006887 383.0
YHH3_k127_699941_6 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000001997 187.0
YHH3_k127_699941_7 AIG2-like family - - - 0.000000000000000000000000000000000000000000031 168.0
YHH3_k127_699941_8 PFAM Uncharacterised protein family (UPF0153) - - - 0.0000000000000000000000000000000001215 142.0
YHH3_k127_699941_9 - - - - 0.00000000019 62.0
YHH3_k127_701645_0 PFAM Radical SAM domain protein K22227 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006429 602.0
YHH3_k127_701645_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 578.0
YHH3_k127_701645_2 Universal stress protein family K06149 - - 0.00000000000000000000000000000000000000000000000000000000000001241 219.0
YHH3_k127_701645_3 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00003,K00982,K00990,K06950,K15371 - 1.1.1.3,1.4.1.2,2.7.7.42,2.7.7.59,2.7.7.89 0.000000000000000000000000000000000000000000000000000001445 198.0
YHH3_k127_7071346_0 PFAM Acetyl-CoA hydrolase transferase - - - 1.124e-299 929.0
YHH3_k127_7071346_1 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 1.422e-210 662.0
YHH3_k127_7071346_2 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000002346 157.0
YHH3_k127_7071346_3 Dodecin K09165 - - 0.000000000000000000000001318 108.0
YHH3_k127_709144_0 TIGRFAM ATP-dependent helicase HrpA K03578,K03579 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004883 450.0
YHH3_k127_7095615_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1191.0
YHH3_k127_7095615_1 Flavin containing amine oxidoreductase - - - 1.104e-234 732.0
YHH3_k127_7095615_10 PFAM Isochorismatase - - - 0.00000000000000000000000000000000000000000000000000000001244 203.0
YHH3_k127_7095615_11 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000003213 173.0
YHH3_k127_7095615_12 Phosphopantetheine attachment site - - - 0.00000000000000000000000000000000000006764 143.0
YHH3_k127_7095615_13 Protein of unknown function (DUF1232) - - - 0.00000000000000000003365 95.0
YHH3_k127_7095615_2 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 2.438e-214 673.0
YHH3_k127_7095615_3 Flavin containing amine oxidoreductase K09835,K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31,5.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 524.0
YHH3_k127_7095615_4 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III K22317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008026 509.0
YHH3_k127_7095615_5 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 399.0
YHH3_k127_7095615_6 AMP-binding enzyme K22319 - 6.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 342.0
YHH3_k127_7095615_7 alpha/beta hydrolase fold K01563,K22318 - 3.8.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 332.0
YHH3_k127_7095615_8 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 310.0
YHH3_k127_7095615_9 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 281.0
YHH3_k127_7217601_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.783e-278 859.0
YHH3_k127_7217601_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006034 251.0
YHH3_k127_7226276_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 2.577e-214 672.0
YHH3_k127_7226276_1 Aldo Keto reductase K18471 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0019170,GO:0055114 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005725 503.0
YHH3_k127_7226276_10 Putative regulatory protein - - - 0.00000000000004329 74.0
YHH3_k127_7226276_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 489.0
YHH3_k127_7226276_3 Belongs to the peptidase S11 family K01286,K07258,K07262 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 419.0
YHH3_k127_7226276_4 Periplasmic binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005603 414.0
YHH3_k127_7226276_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 321.0
YHH3_k127_7226276_6 Methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 310.0
YHH3_k127_7226276_7 Protein of unknown function (DUF523) - - - 0.000000000000000000000000000000000000000003121 158.0
YHH3_k127_7226276_8 Late embryogenesis abundant protein - - - 0.00000000000000000000000000000000002704 140.0
YHH3_k127_7226276_9 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589,K13052 - - 0.0000000000000007121 82.0
YHH3_k127_724038_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 2.885e-314 987.0
YHH3_k127_724038_1 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 1.914e-223 701.0
YHH3_k127_724038_2 Belongs to the citrate synthase family K01647,K01659 - 2.3.3.1,2.3.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 541.0
YHH3_k127_724038_3 Diguanylate cyclase, GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009477 436.0
YHH3_k127_724038_4 TrkA-N domain protein K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005121 260.0
YHH3_k127_7386837_0 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 597.0
YHH3_k127_7386837_1 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009429 437.0
YHH3_k127_7386837_2 cysteine synthase K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 407.0
YHH3_k127_7386837_3 TIGRFAM methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 307.0
YHH3_k127_7386837_4 Transposase - - - 0.0000000000000000000000000000000000000000009035 162.0
YHH3_k127_7386837_5 - - - - 0.0000000000000000000000000000004225 135.0
YHH3_k127_7386837_7 Glycogen recognition site of AMP-activated protein kinase - - - 0.000000000000000000000001952 103.0
YHH3_k127_7386837_8 - - - - 0.00000000000000000001644 95.0
YHH3_k127_7386837_9 DDE superfamily endonuclease - - - 0.000000000000004681 82.0
YHH3_k127_7404887_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005391 466.0
YHH3_k127_7404887_1 TIGRFAM cytochrome c-type biogenesis protein CcsB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 422.0
YHH3_k127_7404887_2 PFAM ResB family protein K07399 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 319.0
YHH3_k127_7404887_3 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000002285 141.0
YHH3_k127_7412036_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 6.308e-228 711.0
YHH3_k127_7412036_1 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006018 323.0
YHH3_k127_7412036_2 SAM-dependent RNA methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000001377 231.0
YHH3_k127_7412036_3 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000007906 154.0
YHH3_k127_7412036_4 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000001293 128.0
YHH3_k127_7412036_5 Belongs to the UPF0109 family K06960 - - 0.000000000000000000001137 96.0
YHH3_k127_7501300_0 Bacterial regulatory protein, Fis family - - - 5.56e-200 629.0
YHH3_k127_7501300_1 Dinitrogenase iron-molybdenum cofactor - - - 0.0000000000000000000000000000000000009384 145.0
YHH3_k127_7501300_2 RESPONSE REGULATOR receiver - - - 0.00000000000006437 78.0
YHH3_k127_7529158_0 Domain of unknown function (DUF3482) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006777 377.0
YHH3_k127_7529158_1 Protein of unknown function (DUF2868) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004672 385.0
YHH3_k127_7529158_2 ATP-dependent helicase K03579 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 345.0
YHH3_k127_7534606_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644 580.0
YHH3_k127_7534606_1 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008712 508.0
YHH3_k127_7534606_2 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 419.0
YHH3_k127_7534606_3 PFAM MotA TolQ ExbB proton channel K03561,K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001129 285.0
YHH3_k127_7534606_4 TonB C terminal K03646,K03832 - - 0.000000000000000000000000000000000000000000000000000000002288 210.0
YHH3_k127_7534606_5 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000000000000000000000000000000001474 177.0
YHH3_k127_7534606_6 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000002291 136.0
YHH3_k127_7544444_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470,K02622 - 5.99.1.3 2.577e-308 953.0
YHH3_k127_7544444_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02621 - - 1.671e-296 923.0
YHH3_k127_7544444_10 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 462.0
YHH3_k127_7544444_11 TIGRFAM single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006013 459.0
YHH3_k127_7544444_12 Protein of unknown function (DUF1015) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 451.0
YHH3_k127_7544444_13 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 418.0
YHH3_k127_7544444_14 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006507 324.0
YHH3_k127_7544444_15 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003976 311.0
YHH3_k127_7544444_16 PFAM Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 315.0
YHH3_k127_7544444_17 SMART phosphoesterase PHP domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 305.0
YHH3_k127_7544444_18 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 302.0
YHH3_k127_7544444_19 SMART Metal-dependent phosphohydrolase, HD region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000625 279.0
YHH3_k127_7544444_2 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.897e-272 846.0
YHH3_k127_7544444_20 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006814 267.0
YHH3_k127_7544444_21 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000725 260.0
YHH3_k127_7544444_22 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.000000000000000000000000000000000000000000000000000000000000000000000002049 248.0
YHH3_k127_7544444_23 Methyltransferase small domain K15460 - 2.1.1.223 0.00000000000000000000000000000000000000000000000000000000000000000009456 239.0
YHH3_k127_7544444_24 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000005583 223.0
YHH3_k127_7544444_25 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000005705 223.0
YHH3_k127_7544444_26 peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000002734 203.0
YHH3_k127_7544444_27 PFAM 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000009848 197.0
YHH3_k127_7544444_28 PFAM Phosphomethylpyrimidine kinase K00941,K14153,K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000001229 201.0
YHH3_k127_7544444_29 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000003887 175.0
YHH3_k127_7544444_3 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756,K01857 - 4.3.2.2,5.5.1.2 6.186e-245 763.0
YHH3_k127_7544444_30 metal-dependent phosphohydrolase HD region - - - 0.00000000000000000000000000000000000000163 165.0
YHH3_k127_7544444_31 deoxyhypusine monooxygenase activity - - - 0.0000000000000000000000000009716 121.0
YHH3_k127_7544444_32 4Fe-4S dicluster domain K00176 - 1.2.7.3 0.000000000000000000003403 96.0
YHH3_k127_7544444_33 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.00000000000000009576 83.0
YHH3_k127_7544444_35 photosystem II stabilization K00703,K02237,K02238 - 2.4.1.21 0.0000000006217 67.0
YHH3_k127_7544444_4 Belongs to the aspartokinase family K00928 - 2.7.2.4 7.72e-211 661.0
YHH3_k127_7544444_5 chelatase, subunit ChlI K07391 - - 3.965e-200 638.0
YHH3_k127_7544444_6 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006324 604.0
YHH3_k127_7544444_7 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 587.0
YHH3_k127_7544444_8 PFAM Pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 590.0
YHH3_k127_7544444_9 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 470.0
YHH3_k127_7549713_0 ribosomal large subunit export from nucleus - - - 0.0000000000000000000000000000000000000000000000000000000000000004228 223.0
YHH3_k127_7549713_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000002057 229.0
YHH3_k127_7549713_2 Sigma-70, region 4 K03088 - - 0.000000000000000000000000007347 115.0
YHH3_k127_7549713_3 Glycogen recognition site of AMP-activated protein kinase - - - 0.00000001221 61.0
YHH3_k127_7549713_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00008037 53.0
YHH3_k127_7615409_0 Subtilase family - - - 0.0 1232.0
YHH3_k127_7615409_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007686 410.0
YHH3_k127_7615409_11 Clostripain family - - - 0.000000000000001139 90.0
YHH3_k127_7615409_12 Beta-L-arabinofuranosidase, GH127 - - - 0.000000000000009879 90.0
YHH3_k127_7615409_13 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.000000000000464 84.0
YHH3_k127_7615409_14 helix_turn_helix, Lux Regulon - - - 0.000000005269 61.0
YHH3_k127_7615409_15 TPR repeat - - - 0.0000000619 61.0
YHH3_k127_7615409_2 Bacterial protein of unknown function (DUF882) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 348.0
YHH3_k127_7615409_3 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 330.0
YHH3_k127_7615409_4 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002633 286.0
YHH3_k127_7615409_6 regulation of ryanodine-sensitive calcium-release channel activity - - - 0.00000000000000000000000000000000000000000000000000003246 195.0
YHH3_k127_7615409_7 - - - - 0.000000000000000000000000000000000000002798 162.0
YHH3_k127_7615409_8 helix_turn_helix, mercury resistance K13640 - - 0.00000000000000000000000000000000001912 143.0
YHH3_k127_7615409_9 Transcriptional regulator, MerR family - - - 0.00000000000000000000000000000000002921 138.0
YHH3_k127_7636104_0 Heat shock 70 kDa protein K04043 - - 0.0 1088.0
YHH3_k127_7636104_1 cysteine protease - - - 7.39e-265 832.0
YHH3_k127_7636104_10 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 313.0
YHH3_k127_7636104_11 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001289 263.0
YHH3_k127_7636104_12 TIGRFAM tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000001206 246.0
YHH3_k127_7636104_13 - - - - 0.000000000000000000000000000000000000000000000000000471 192.0
YHH3_k127_7636104_14 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000003303 188.0
YHH3_k127_7636104_15 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000000000000000000000000000000002 170.0
YHH3_k127_7636104_16 Sulfotransferase domain - - - 0.00000000000000000000000000000000000000000002738 172.0
YHH3_k127_7636104_17 electron transfer activity K05337 - - 0.0000000000000003546 79.0
YHH3_k127_7636104_19 SpoVT / AbrB like domain - - - 0.00004587 46.0
YHH3_k127_7636104_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 5.099e-258 803.0
YHH3_k127_7636104_3 Aminotransferase class I and II K00814 - 2.6.1.2 4.095e-230 719.0
YHH3_k127_7636104_4 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006103 577.0
YHH3_k127_7636104_5 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 478.0
YHH3_k127_7636104_6 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 454.0
YHH3_k127_7636104_7 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008513 400.0
YHH3_k127_7636104_8 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 384.0
YHH3_k127_7636104_9 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 374.0
YHH3_k127_7653317_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.495e-312 963.0
YHH3_k127_7653317_1 alginic acid biosynthetic process - - - 1.421e-256 815.0
YHH3_k127_7653317_11 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000000000006992 162.0
YHH3_k127_7653317_12 Bacterial transglutaminase-like cysteine proteinase BTLCP - - - 0.0000000000000000000000000000000000000000001275 168.0
YHH3_k127_7653317_14 COG0477 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000001385 167.0
YHH3_k127_7653317_15 glycine betaine transport K05845,K05846 - - 0.00000000000000000000000000000000000383 144.0
YHH3_k127_7653317_16 alginic acid biosynthetic process - - - 0.000000000000000000000000000000000478 143.0
YHH3_k127_7653317_18 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.000000000000000001384 87.0
YHH3_k127_7653317_19 cellulase activity - - - 0.000000003108 68.0
YHH3_k127_7653317_2 PFAM Filamentation induced by cAMP - - - 1.243e-194 618.0
YHH3_k127_7653317_20 peptidyl-tyrosine sulfation - - - 0.000000003335 66.0
YHH3_k127_7653317_3 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 544.0
YHH3_k127_7653317_4 TIGRFAM branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008456 512.0
YHH3_k127_7653317_5 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003527 441.0
YHH3_k127_7653317_6 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 357.0
YHH3_k127_7653317_7 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003435 259.0
YHH3_k127_7653317_8 HupE / UreJ protein K03192 - - 0.00000000000000000000000000000000000000000000000000000000221 205.0
YHH3_k127_7653317_9 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000001258 194.0
YHH3_k127_7699067_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.0 1296.0
YHH3_k127_7699067_1 Sodium/hydrogen exchanger family - - - 1.2e-322 1001.0
YHH3_k127_7699067_10 PFAM HPP family K07168 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007491 298.0
YHH3_k127_7699067_11 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001038 289.0
YHH3_k127_7699067_12 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003081 274.0
YHH3_k127_7699067_13 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001399 266.0
YHH3_k127_7699067_14 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000001649 258.0
YHH3_k127_7699067_15 PFAM YsiA-like protein, C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001434 252.0
YHH3_k127_7699067_16 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003276 259.0
YHH3_k127_7699067_17 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000001403 240.0
YHH3_k127_7699067_18 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001282 233.0
YHH3_k127_7699067_19 PFAM CBS domain - - - 0.00000000000000000000000000000000000000000000000000000001405 204.0
YHH3_k127_7699067_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 6.685e-222 716.0
YHH3_k127_7699067_20 PFAM Tripartite ATP-independent periplasmic transporter, DctQ component - - - 0.000000000000000000000000000000000000000000000000000004352 195.0
YHH3_k127_7699067_21 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000002488 159.0
YHH3_k127_7699067_22 Protein of unknown function (DUF2442) - - - 0.0000000000000000000000000000000000000003206 151.0
YHH3_k127_7699067_23 B12 binding domain - - - 0.00000000000000000000000000000000000002923 162.0
YHH3_k127_7699067_25 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000005266 156.0
YHH3_k127_7699067_26 ferric iron binding K02380 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0008199,GO:0009061,GO:0009987,GO:0010467,GO:0015980,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046872,GO:0046914,GO:0051604,GO:0055114,GO:0071704,GO:1901564 - 0.0000000000000000000000000000000004811 141.0
YHH3_k127_7699067_27 Prokaryotic cytochrome b561 K00127 - - 0.00000000000000000000000002872 117.0
YHH3_k127_7699067_28 - - - - 0.0000000000000000000000001005 113.0
YHH3_k127_7699067_29 electron transfer activity K05337,K17247 - - 0.0000000000000000000001656 98.0
YHH3_k127_7699067_3 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 1.183e-204 644.0
YHH3_k127_7699067_30 Domain of unknown function (DUF4160) - - - 0.00000000000000000003071 91.0
YHH3_k127_7699067_31 Clostripain family - - - 0.000000000002611 79.0
YHH3_k127_7699067_33 Transcriptional regulator - - - 0.000000109 57.0
YHH3_k127_7699067_34 DNA primase - - - 0.0000005099 54.0
YHH3_k127_7699067_35 Transposase K07494 - - 0.00003771 48.0
YHH3_k127_7699067_4 TIGRFAM YD repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 557.0
YHH3_k127_7699067_5 PFAM Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 463.0
YHH3_k127_7699067_6 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 436.0
YHH3_k127_7699067_7 (ABC) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005561 424.0
YHH3_k127_7699067_8 TRAP transporter T-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 329.0
YHH3_k127_7699067_9 4Fe-4S dicluster domain K00124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 315.0
YHH3_k127_782755_0 domain, Protein - - - 0.000000000000000000000000000000000000000000001616 173.0
YHH3_k127_782755_1 transcriptional regulator K13572 - - 0.00000000000000000000000000000000000165 148.0
YHH3_k127_782755_2 WYL domain - - - 0.00000000000000000000000003026 113.0
YHH3_k127_782755_3 Belongs to the 'phage' integrase family - - - 0.00000000000000009947 81.0
YHH3_k127_782755_4 Belongs to the 'phage' integrase family - - - 0.000008448 53.0
YHH3_k127_7844435_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1468.0
YHH3_k127_7844435_1 TIGRFAM deoxyguanosinetriphosphate triphosphohydrolase K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 505.0
YHH3_k127_7844435_2 4Fe-4S dicluster domain K11473 - - 0.00000000000000000000005592 102.0
YHH3_k127_7844435_3 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000152 55.0
YHH3_k127_7845515_0 Seven times multi-haem cytochrome CxxCH - - - 9.009e-257 796.0
YHH3_k127_7845515_1 Dehydrogenase E1 K00161,K21416 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000798 584.0
YHH3_k127_7845515_10 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000001553 222.0
YHH3_k127_7845515_11 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000002812 141.0
YHH3_k127_7845515_12 - - - - 0.000000000000006193 82.0
YHH3_k127_7845515_2 Transketolase, pyrimidine binding domain K00162,K21417 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008693 569.0
YHH3_k127_7845515_3 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 509.0
YHH3_k127_7845515_4 - K00712 - 2.4.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004801 493.0
YHH3_k127_7845515_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 429.0
YHH3_k127_7845515_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 353.0
YHH3_k127_7845515_7 PFAM NapC NirT cytochrome c K02569,K03532 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008172 289.0
YHH3_k127_7845515_8 DDE superfamily endonuclease K07494 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002129 268.0
YHH3_k127_7845515_9 Protein phosphatase 2C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005573 274.0
YHH3_k127_7947051_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006038 591.0
YHH3_k127_7971950_0 TIGRFAM Outer membrane protein K13735,K20276 - - 0.0 1757.0
YHH3_k127_7971950_1 Acts as a magnesium transporter K06213 - - 1.015e-206 656.0
YHH3_k127_7971950_2 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000008724 210.0
YHH3_k127_7971950_3 Plasmid stabilization system - - - 0.00000000000000000000000000000000000000001339 154.0
YHH3_k127_7971950_4 PFAM glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000004752 156.0
YHH3_k127_7971950_5 O-antigen - - - 0.00000000000006463 85.0
YHH3_k127_7971950_6 Transposase IS200 like - - - 0.00005384 48.0
YHH3_k127_7984452_0 UPF0210 protein K09157 - - 7.628e-202 636.0
YHH3_k127_7984452_1 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000003789 176.0
YHH3_k127_7984452_2 ACT domain K07166 - - 0.00000000000000000000000000119 114.0
YHH3_k127_7990583_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0 1791.0
YHH3_k127_7990583_1 Glutamine amidotransferase domain K00764 - 2.4.2.14 1.288e-236 738.0
YHH3_k127_7990583_2 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002925 553.0
YHH3_k127_7990583_3 competence protein COMEC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 451.0
YHH3_k127_7990583_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 341.0
YHH3_k127_7990583_5 - - - - 0.0000000000000000002863 99.0
YHH3_k127_7990583_6 Subtilase family - - - 0.000000000000000001125 86.0
YHH3_k127_7990583_7 BON domain - - - 0.000000000001094 68.0
YHH3_k127_800155_0 FtsX-like permease family - - - 0.0 1744.0
YHH3_k127_800155_1 PFAM Oligopeptide transporter OPT superfamily - - - 0.0 1191.0
YHH3_k127_800155_10 - - - - 0.0000000000000000000000000000000000000000000000000104 188.0
YHH3_k127_800155_11 Cyclic nucleotide-monophosphate binding domain K10914 - - 0.00000000000000000000000000000000000000000001342 168.0
YHH3_k127_800155_12 - - - - 0.000000000000000000000000000002431 129.0
YHH3_k127_800155_13 Phosphoglycerate mutase family K15634 - 5.4.2.12 0.000000000006455 67.0
YHH3_k127_800155_2 ABC transporter transmembrane region K02021 - - 0.0 1034.0
YHH3_k127_800155_3 - - - - 2.864e-313 974.0
YHH3_k127_800155_4 PFAM ABC transporter related K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 430.0
YHH3_k127_800155_5 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003095 427.0
YHH3_k127_800155_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 410.0
YHH3_k127_800155_7 Glycosyltransferase family 28 C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 349.0
YHH3_k127_800155_8 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004762 243.0
YHH3_k127_800155_9 PFAM Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000001758 230.0
YHH3_k127_8041973_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.586e-204 652.0
YHH3_k127_8041973_1 4Fe-4S dicluster domain - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004735 380.0
YHH3_k127_8043634_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 2.93e-200 631.0
YHH3_k127_8043634_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 376.0
YHH3_k127_8043634_2 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004106 293.0
YHH3_k127_8043634_3 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K09181,K15520 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008080,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0017076,GO:0030551,GO:0030552,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 2.3.1.189 0.000000000000000000000000000000000000000000000000156 184.0
YHH3_k127_8043634_4 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000003531 134.0
YHH3_k127_8051097_0 AAA domain - - - 1.475e-232 733.0
YHH3_k127_8051097_1 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 436.0
YHH3_k127_8051097_10 type III K01156 - 3.1.21.5 0.000003296 50.0
YHH3_k127_8051097_2 PFAM filamentation induced by cAMP protein Fic - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 418.0
YHH3_k127_8051097_3 Protein of unknown function (DUF1566) - - - 0.0000000000000000000000000000000000000000000000000000000000000002055 236.0
YHH3_k127_8051097_4 Protein of unknown function (DUF541) - - - 0.000000000000000000000000000000000000000000000006689 180.0
YHH3_k127_8051097_5 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000000000000000000000005754 159.0
YHH3_k127_8051097_6 - - - - 0.00000000000000000000000000005285 136.0
YHH3_k127_8051097_8 Domain of unknown function (DUF4258) - - - 0.00000000001721 68.0
YHH3_k127_8051097_9 - - - - 0.00000147 61.0
YHH3_k127_8075860_0 PKD domain - - - 0.000000000000000000000000000000000000000000000000000000000001221 222.0
YHH3_k127_8075860_1 NAD dependent epimerase/dehydratase family K07071 - - 0.000000000000000000814 91.0
YHH3_k127_8171990_0 Aminopeptidase I zinc metalloprotease (M18) K01267 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008270,GO:0016787,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.11.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045 477.0
YHH3_k127_8171990_1 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008619 370.0
YHH3_k127_8171990_2 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000000000000000000000000000000000000008324 206.0
YHH3_k127_8356075_0 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000793 329.0
YHH3_k127_8356075_1 HD domain - - - 0.0000000000204 67.0
YHH3_k127_8422196_0 HELICc2 K03722 - 3.6.4.12 1.25e-241 769.0
YHH3_k127_8422196_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 2.125e-220 700.0
YHH3_k127_8422196_10 Divergent polysaccharide deacetylase K09798 - - 0.00000000000000000000000000000000000000000000000000000000000002523 226.0
YHH3_k127_8422196_11 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000001506 200.0
YHH3_k127_8422196_12 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000000000000001305 189.0
YHH3_k127_8422196_13 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. - - - 0.0000000000000000000000000000001623 134.0
YHH3_k127_8422196_2 inositol 2-dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 394.0
YHH3_k127_8422196_3 Methylene-tetrahydrofolate reductase C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 386.0
YHH3_k127_8422196_4 amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007542 325.0
YHH3_k127_8422196_5 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 311.0
YHH3_k127_8422196_6 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 311.0
YHH3_k127_8422196_7 PFAM ThiJ PfpI domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007158 303.0
YHH3_k127_8422196_8 Belongs to the LarC family K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001164 278.0
YHH3_k127_8422196_9 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000009439 218.0
YHH3_k127_84493_0 Haloacid dehalogenase-like hydrolase - - - 4.463e-285 891.0
YHH3_k127_84493_1 CoA-binding domain - - - 9.809e-206 658.0
YHH3_k127_84493_10 Macrocin-O-methyltransferase (TylF) - - - 0.00000000000000000000000000000000000000000000000000000004015 207.0
YHH3_k127_84493_11 Protein conserved in bacteria - - - 0.00000000000000000146 93.0
YHH3_k127_84493_12 - - - - 0.000000003735 58.0
YHH3_k127_84493_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 564.0
YHH3_k127_84493_3 glycosyl transferase family 2 K20444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 465.0
YHH3_k127_84493_4 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 425.0
YHH3_k127_84493_5 ABC-type polysaccharide polyol phosphate transport system ATPase component K01990,K09691,K09693 - 3.6.3.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 394.0
YHH3_k127_84493_6 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 357.0
YHH3_k127_84493_7 ABC-2 type transporter K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 344.0
YHH3_k127_84493_8 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002049 277.0
YHH3_k127_84493_9 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001297 254.0
YHH3_k127_848418_0 PFAM Glycosyl transferase, group 1 K13057 - 2.4.1.245 1.392e-196 619.0
YHH3_k127_848418_1 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008889 289.0
YHH3_k127_848418_2 Alpha amylase, catalytic domain K06044 - 5.4.99.15 0.0000000000000000000000000000000000003241 146.0
YHH3_k127_848418_3 PFAM AMP-dependent synthetase and ligase K00666 - - 0.0000000000000000000004776 100.0
YHH3_k127_862934_0 Sugar transferase K03606 - - 6.076e-208 655.0
YHH3_k127_862934_1 lipolytic protein G-D-S-L family - - - 8.629e-203 663.0
YHH3_k127_862934_11 Involved in the tonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002753 269.0
YHH3_k127_862934_12 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000075 241.0
YHH3_k127_862934_13 PFAM Coenzyme F420 hydrogenase dehydrogenase, beta subunit K00441 - 1.12.98.1 0.00000000000000000000000000000000000000000000000000000000000000000177 245.0
YHH3_k127_862934_14 - - - - 0.00000000000000000000000000000000000000000000009558 187.0
YHH3_k127_862934_15 O-acyltransferase activity K00661 - 2.3.1.79 0.0000000000000000000000000000000000000002032 157.0
YHH3_k127_862934_16 lysyltransferase activity K07027 - - 0.00000000000000000000000000000000001691 155.0
YHH3_k127_862934_2 DHHA2 K15986 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 519.0
YHH3_k127_862934_3 PFAM Glycosyl transferase family 2 K10012 - 2.4.2.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 429.0
YHH3_k127_862934_4 PFAM Glycosyl transferase family 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006737 418.0
YHH3_k127_862934_5 Belongs to the BI1 family K06890,K19416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 342.0
YHH3_k127_862934_6 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 335.0
YHH3_k127_862934_7 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 349.0
YHH3_k127_862934_8 PFAM Glycosyl transferase family 2 K12992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 316.0
YHH3_k127_862934_9 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002098 270.0
YHH3_k127_8652693_0 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000233 537.0
YHH3_k127_8652693_1 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 488.0
YHH3_k127_8652693_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 366.0
YHH3_k127_8652693_3 cyclic nucleotide-binding K10914 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005746 284.0
YHH3_k127_8652693_4 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000003648 243.0
YHH3_k127_8652693_5 Bacterial transglutaminase-like cysteine proteinase BTLCP - - - 0.0000000000000000000000000000000000000000001876 168.0
YHH3_k127_8652693_6 Transposase IS200 like - - - 0.00000000000008457 73.0
YHH3_k127_8652693_7 TIR domain - - - 0.0001323 54.0
YHH3_k127_8652693_8 Transposase IS200 like - - - 0.000222 48.0
YHH3_k127_8679284_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0 1020.0
YHH3_k127_8679284_1 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 3.053e-318 990.0
YHH3_k127_8679284_10 TIGRFAM histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 533.0
YHH3_k127_8679284_11 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008395 538.0
YHH3_k127_8679284_12 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 518.0
YHH3_k127_8679284_13 Nitronate monooxygenase K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 490.0
YHH3_k127_8679284_14 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006839 459.0
YHH3_k127_8679284_15 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 460.0
YHH3_k127_8679284_16 DNA polymerase III, delta' K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 431.0
YHH3_k127_8679284_17 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 402.0
YHH3_k127_8679284_18 cyclic nucleotide binding K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 381.0
YHH3_k127_8679284_19 Enoyl-(Acyl carrier protein) reductase K16066 - 1.1.1.381 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005725 366.0
YHH3_k127_8679284_2 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 7.602e-313 967.0
YHH3_k127_8679284_20 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006476 352.0
YHH3_k127_8679284_21 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 327.0
YHH3_k127_8679284_22 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 286.0
YHH3_k127_8679284_23 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008023 251.0
YHH3_k127_8679284_24 Iron-storage protein K02217 - 1.16.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000177 242.0
YHH3_k127_8679284_25 lyase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000433 229.0
YHH3_k127_8679284_26 PFAM CMP dCMP deaminase zinc-binding K01487 - 3.5.4.3 0.00000000000000000000000000000000000000000000000000002845 193.0
YHH3_k127_8679284_27 Predicted membrane protein (DUF2318) - - - 0.00000000000000000000000000000000000000000000000109 179.0
YHH3_k127_8679284_28 Nitrogen regulatory protein P-II K04751 - - 0.000000000000000000000000000000000000000000000001176 177.0
YHH3_k127_8679284_29 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000000001091 153.0
YHH3_k127_8679284_3 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 5.83e-278 864.0
YHH3_k127_8679284_32 iron ion homeostasis K04758 - - 0.0000000000000000002299 94.0
YHH3_k127_8679284_33 PFAM Heavy metal transport detoxification protein K07213 - - 0.0000000000000003634 82.0
YHH3_k127_8679284_35 DNA-binding transcription factor activity K15973 - - 0.000001178 56.0
YHH3_k127_8679284_37 Virus attachment protein p12 family - - - 0.00003433 48.0
YHH3_k127_8679284_4 Ammonium Transporter K03320 - - 2.264e-230 721.0
YHH3_k127_8679284_5 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 3.453e-204 644.0
YHH3_k127_8679284_6 Protein of unknown function (DUF3373) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 571.0
YHH3_k127_8679284_7 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005005 561.0
YHH3_k127_8679284_9 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 534.0
YHH3_k127_8738178_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000005753 188.0
YHH3_k127_8738178_1 - - - - 0.000000000000000000000005181 106.0
YHH3_k127_877416_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1128.0
YHH3_k127_877416_1 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00437,K05922,K06281 - 1.12.2.1,1.12.5.1,1.12.99.6 3.909e-314 967.0
YHH3_k127_877416_10 3-beta hydroxysteroid dehydrogenase isomerase K21271,K22320 - 1.1.1.394,1.1.1.412 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 379.0
YHH3_k127_877416_11 AMP-binding enzyme K22319 - 6.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 351.0
YHH3_k127_877416_12 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003375 328.0
YHH3_k127_877416_13 TIGRFAM hydrogenase accessory protein HypB K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004011 331.0
YHH3_k127_877416_14 class II (D K and N) K04568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 321.0
YHH3_k127_877416_15 TIGRFAM Ni Fe-hydrogenase, b-type cytochrome subunit K03620 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003065 282.0
YHH3_k127_877416_16 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007429 261.0
YHH3_k127_877416_17 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000000000000000000000000000000000003278 222.0
YHH3_k127_877416_18 HIT domain K19710 - 2.7.7.53 0.00000000000000000000000000000000000000000000000000000000000005488 220.0
YHH3_k127_877416_19 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000001761 205.0
YHH3_k127_877416_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.674e-298 919.0
YHH3_k127_877416_20 Phosphoesterase K07095 - - 0.000000000000000000000000000000000000000000000000000001156 198.0
YHH3_k127_877416_21 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000001377 157.0
YHH3_k127_877416_22 PFAM peptidase M52 hydrogen uptake protein K03605 - - 0.000000000000000000000000000000000000001507 157.0
YHH3_k127_877416_23 MarR family transcriptional K15973 - - 0.000000000000000000000000000000008239 132.0
YHH3_k127_877416_24 Hydrogenase/urease nickel incorporation, metallochaperone, hypA K04651 - - 0.00000000000000000000000002893 112.0
YHH3_k127_877416_25 Sulfotransferase family - - - 0.00000000000004452 84.0
YHH3_k127_877416_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 5.4e-270 835.0
YHH3_k127_877416_4 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 5.676e-223 699.0
YHH3_k127_877416_5 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K01142,K10773 - 3.1.11.2,4.2.99.18 5.895e-207 657.0
YHH3_k127_877416_6 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005895 552.0
YHH3_k127_877416_7 Hydrogenase (NiFe) small subunit HydA K05927,K06282,K18008 - 1.12.2.1,1.12.5.1,1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 512.0
YHH3_k127_877416_8 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 503.0
YHH3_k127_877416_9 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 412.0
YHH3_k127_8874946_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 3.965e-223 702.0
YHH3_k127_8874946_1 PFAM DisA bacterial checkpoint controller nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 608.0
YHH3_k127_8874946_10 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 460.0
YHH3_k127_8874946_11 HlyD family secretion protein K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 438.0
YHH3_k127_8874946_12 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 402.0
YHH3_k127_8874946_13 Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009364 370.0
YHH3_k127_8874946_14 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 373.0
YHH3_k127_8874946_15 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 350.0
YHH3_k127_8874946_16 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 336.0
YHH3_k127_8874946_17 Pfam:HipA_N K07154 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003999 302.0
YHH3_k127_8874946_18 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004202 286.0
YHH3_k127_8874946_19 3' exoribonuclease, RNase T-like K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000139 265.0
YHH3_k127_8874946_2 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 607.0
YHH3_k127_8874946_20 Responsible for synthesis of pseudouridine from uracil K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000000004037 252.0
YHH3_k127_8874946_21 Yip1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006878 244.0
YHH3_k127_8874946_22 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.00000000000000000000000000000000000000000000000000000000000001204 225.0
YHH3_k127_8874946_23 spore germination K08978 - - 0.0000000000000000000000000000000000000000000000000000000000009963 221.0
YHH3_k127_8874946_24 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000004019 217.0
YHH3_k127_8874946_25 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000001154 194.0
YHH3_k127_8874946_26 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000008355 192.0
YHH3_k127_8874946_27 PFAM GCN5-related N-acetyltransferase K03824 - - 0.000000000000000000000000000000000000000000000000008745 182.0
YHH3_k127_8874946_28 SMART ATP-binding region ATPase domain protein K07710 - 2.7.13.3 0.0000000000000000000000000000000000000000000000002351 198.0
YHH3_k127_8874946_29 Protein of unknown function (DUF1178) - - - 0.0000000000000000000000000000000000000004017 153.0
YHH3_k127_8874946_3 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 558.0
YHH3_k127_8874946_30 response to abiotic stimulus - - - 0.0000000000000000000000000000000000004777 144.0
YHH3_k127_8874946_31 TIGRFAM Addiction module toxin, RelE StbE K06218 - - 0.0000000000000000000000000000000000009762 140.0
YHH3_k127_8874946_32 Protein of unknown function (DUF3175) - - - 0.00000000000000000000000000000000000836 139.0
YHH3_k127_8874946_33 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000000000004367 138.0
YHH3_k127_8874946_34 Antitoxin component of a toxin-antitoxin (TA) module K18923 - - 0.00000000000000000000000000000001835 128.0
YHH3_k127_8874946_35 Uncharacterized conserved protein (DUF2277) - - - 0.000000000000000000000000000007164 120.0
YHH3_k127_8874946_36 Cupin 2, conserved barrel domain protein K05913 - 1.13.11.41 0.00000000000000000000000000004852 119.0
YHH3_k127_8874946_37 - - - - 0.00000000000000000000000000008007 121.0
YHH3_k127_8874946_38 two-component sensor histidine kinase - - - 0.000000000000000000000000001507 128.0
YHH3_k127_8874946_39 CopG domain protein DNA-binding domain protein - - - 0.0000000000000000000004061 97.0
YHH3_k127_8874946_4 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009452 551.0
YHH3_k127_8874946_40 - - - - 0.0000000000000000000416 97.0
YHH3_k127_8874946_41 Putative metal-binding motif - - - 0.0000000000000000004763 101.0
YHH3_k127_8874946_42 acetyltransferase K03824 - - 0.000000000000000001566 86.0
YHH3_k127_8874946_43 - - - - 0.0000000000000006949 92.0
YHH3_k127_8874946_44 Helix-turn-helix XRE-family like proteins - - - 0.000000000003695 70.0
YHH3_k127_8874946_45 TIGRFAM addiction module antidote protein, HigA family K21498 - - 0.0000000004252 62.0
YHH3_k127_8874946_46 - - - - 0.000002015 55.0
YHH3_k127_8874946_47 Recombinase zinc beta ribbon domain - - - 0.00002042 46.0
YHH3_k127_8874946_48 - - - - 0.00002189 53.0
YHH3_k127_8874946_49 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.0003365 45.0
YHH3_k127_8874946_5 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006139 509.0
YHH3_k127_8874946_50 Transposase DDE domain K07495 - - 0.0007745 42.0
YHH3_k127_8874946_6 PFAM peptidase M24 K01262,K01271 - 3.4.11.9,3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008589 489.0
YHH3_k127_8874946_7 pyridine nucleotide-disulphide oxidoreductase dimerisation region K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 488.0
YHH3_k127_8874946_8 PFAM sigma-54 factor interaction domain-containing protein K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 482.0
YHH3_k127_8874946_9 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006945 475.0
YHH3_k127_8884975_0 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 527.0
YHH3_k127_8884975_1 PFAM MscS Mechanosensitive ion channel K16053 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 499.0
YHH3_k127_8884975_10 PKD domain K07282 - - 0.00002093 53.0
YHH3_k127_8884975_2 metal-dependent phosphohydrolase HD sub K00970 - 2.7.7.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006117 449.0
YHH3_k127_8884975_3 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 398.0
YHH3_k127_8884975_4 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006287 398.0
YHH3_k127_8884975_5 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 315.0
YHH3_k127_8884975_6 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.0000000000000000000000000000000000000000000000000000006628 197.0
YHH3_k127_8884975_7 RuvA, C-terminal domain K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000001242 199.0
YHH3_k127_8884975_8 Thioredoxin domain - - - 0.0000000000000000000000000000000000000006419 164.0
YHH3_k127_8884975_9 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000001576 51.0
YHH3_k127_8956758_0 Bifunctional transglycosylase second domain K05365 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 514.0
YHH3_k127_8956758_1 Tetratricopeptide repeat - - - 0.0000000000000006341 83.0
YHH3_k127_8956758_2 - - - - 0.000000004011 59.0
YHH3_k127_8972593_0 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 450.0
YHH3_k127_8972593_1 Phosphopantetheine attachment site - - - 0.000000000000000000000006086 103.0
YHH3_k127_9012944_0 MobA-like NTP transferase domain K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000000000000000000000000000004827 233.0
YHH3_k127_9012944_1 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03753,K13818 - 2.7.7.77 0.0000000000000000000000000000000000000000000000000000597 191.0
YHH3_k127_9012944_2 Cytochrome c - - - 0.000000000000000000000000000000001709 133.0
YHH3_k127_9029454_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005023 533.0
YHH3_k127_9029454_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001863 271.0
YHH3_k127_9029454_2 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000000002974 175.0
YHH3_k127_9029454_3 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.000000000000000000000008633 101.0
YHH3_k127_9029454_4 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000006028 96.0
YHH3_k127_9058890_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 2.232e-225 713.0
YHH3_k127_9058890_1 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000046 497.0
YHH3_k127_9058890_2 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 482.0
YHH3_k127_9058890_3 Biotin-lipoyl like K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 367.0
YHH3_k127_9058890_4 B12 binding domain K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000003861 191.0
YHH3_k127_9058890_5 ArgK protein K07588 - - 0.000000000000000000000000000000000000000002854 158.0
YHH3_k127_9058890_6 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000001312 62.0
YHH3_k127_9079257_0 Dihydroxyacetone kinase family K07030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006549 609.0
YHH3_k127_9079257_1 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 531.0
YHH3_k127_9079257_10 Putative molybdenum carrier - - - 0.000000000000000000000000000000000000000000000000008372 185.0
YHH3_k127_9079257_11 PFAM Cold-shock K03704 - - 0.0000000000000000000000000000000006965 130.0
YHH3_k127_9079257_12 Rubrerythrin - - - 0.000000000000000000000000000003197 125.0
YHH3_k127_9079257_13 Endonuclease containing a URI domain K07461 - - 0.00000000000000001635 85.0
YHH3_k127_9079257_14 PcfJ-like protein - - - 0.000000005181 68.0
YHH3_k127_9079257_15 Endonuclease containing a URI domain K07461 - - 0.0001562 45.0
YHH3_k127_9079257_2 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 501.0
YHH3_k127_9079257_3 auxin efflux carrier K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 445.0
YHH3_k127_9079257_4 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 368.0
YHH3_k127_9079257_5 lipid A biosynthesis acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 371.0
YHH3_k127_9079257_6 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008775 304.0
YHH3_k127_9079257_7 Belongs to the bacterial solute-binding protein 9 family K09815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000165 270.0
YHH3_k127_9079257_8 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000000000000000003298 208.0
YHH3_k127_9079257_9 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000004501 207.0
YHH3_k127_9154418_0 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000002344 142.0
YHH3_k127_9154418_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000004994 139.0
YHH3_k127_9257472_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 1.593e-309 955.0
YHH3_k127_9257472_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 1.655e-291 899.0
YHH3_k127_9257472_10 Mechanosensitive ion channel K03442 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 336.0
YHH3_k127_9257472_11 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 335.0
YHH3_k127_9257472_12 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 313.0
YHH3_k127_9257472_13 TIGRFAM cobalt ABC transporter, inner membrane subunit CbiQ K02008 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 308.0
YHH3_k127_9257472_14 Phenazine biosynthesis-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000466 296.0
YHH3_k127_9257472_15 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000004048 239.0
YHH3_k127_9257472_16 sequence-specific DNA binding - - - 0.0000000000000000000000000000000000000000000000000000000001618 205.0
YHH3_k127_9257472_17 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000002283 181.0
YHH3_k127_9257472_18 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000000000000000000000000000000000000001036 161.0
YHH3_k127_9257472_19 regulation of translation K01524,K03530,K04764,K05788 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000001568 145.0
YHH3_k127_9257472_2 Dehydratase family K01687 - 4.2.1.9 9.415e-274 856.0
YHH3_k127_9257472_20 Putative ATP-dependant zinc protease - - - 0.0000000000000000000000000000000001542 139.0
YHH3_k127_9257472_21 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000008374 82.0
YHH3_k127_9257472_3 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 6.595e-247 769.0
YHH3_k127_9257472_4 PFAM type II secretion system protein E K02669 - - 4.615e-204 640.0
YHH3_k127_9257472_5 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009905 564.0
YHH3_k127_9257472_6 MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000042 537.0
YHH3_k127_9257472_7 Cobalt uptake substrate-specific transmembrane region K02007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 452.0
YHH3_k127_9257472_8 TIGRFAM competence damage-inducible protein CinA K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005418 419.0
YHH3_k127_9257472_9 part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006,K16787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008262 358.0
YHH3_k127_9273103_0 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000001735 122.0
YHH3_k127_9273103_2 Belongs to the MEMO1 family K06990 - - 0.00000009054 53.0
YHH3_k127_9294530_0 TIGRFAM glutaminyl-tRNA synthetase K01886 - 6.1.1.18 4.887e-295 912.0
YHH3_k127_9294530_1 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 2.615e-255 800.0
YHH3_k127_9294530_10 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004216 274.0
YHH3_k127_9294530_11 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001177 273.0
YHH3_k127_9294530_12 PFAM transcription factor CarD K07736 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002547 258.0
YHH3_k127_9294530_13 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002439 264.0
YHH3_k127_9294530_14 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003088 265.0
YHH3_k127_9294530_15 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000002208 216.0
YHH3_k127_9294530_16 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000001163 212.0
YHH3_k127_9294530_17 PFAM doubled CXXCH domain protein - - - 0.0000000000000000000000000000000000000000000000000000000008473 204.0
YHH3_k127_9294530_18 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000000000000003372 207.0
YHH3_k127_9294530_19 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000000000008477 187.0
YHH3_k127_9294530_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 3.324e-251 782.0
YHH3_k127_9294530_20 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000000002913 198.0
YHH3_k127_9294530_21 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000000000000000000000000000000000000000000000002286 183.0
YHH3_k127_9294530_22 Domain of unknown function (DUF1844) - - - 0.00000000000000000000000000000000001428 138.0
YHH3_k127_9294530_23 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000004668 114.0
YHH3_k127_9294530_3 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 8.728e-236 732.0
YHH3_k127_9294530_4 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 600.0
YHH3_k127_9294530_5 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005214 527.0
YHH3_k127_9294530_6 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006139 509.0
YHH3_k127_9294530_7 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000462 406.0
YHH3_k127_9294530_8 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004934 357.0
YHH3_k127_9294530_9 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 319.0
YHH3_k127_9311457_0 Di-haem cytochrome c peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 353.0
YHH3_k127_9311457_1 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006704 330.0
YHH3_k127_9311457_2 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 322.0
YHH3_k127_9311457_3 O-methyltransferase K00588 - 2.1.1.104 0.0000000000000000000000000000000000000000000000000000000000844 212.0
YHH3_k127_9311457_4 Mu-like prophage protein Gp16 - - - 0.0000000000000000000000000000000000000001103 154.0
YHH3_k127_9311457_5 23S rRNA-intervening sequence protein - - - 0.00000000005596 66.0
YHH3_k127_9311457_6 23S rRNA-intervening sequence protein - - - 0.0002881 46.0
YHH3_k127_9316438_0 4Fe-4S dicluster domain - - - 4.11e-321 986.0
YHH3_k127_9316438_1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 2.095e-314 970.0
YHH3_k127_9316438_10 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 3.284e-204 647.0
YHH3_k127_9316438_11 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 605.0
YHH3_k127_9316438_12 TIGRFAM acetylornithine and succinylornithine K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009852 596.0
YHH3_k127_9316438_13 PFAM Nitrate reductase gamma subunit K00374 - 1.7.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 536.0
YHH3_k127_9316438_14 PFAM dihydropteroate synthase DHPS K15023 - 2.1.1.258 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007955 527.0
YHH3_k127_9316438_15 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 530.0
YHH3_k127_9316438_16 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006417 499.0
YHH3_k127_9316438_17 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006173 463.0
YHH3_k127_9316438_18 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 453.0
YHH3_k127_9316438_19 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3,2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 446.0
YHH3_k127_9316438_2 PFAM ABC transporter K06158 - - 2.345e-288 898.0
YHH3_k127_9316438_20 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009096 440.0
YHH3_k127_9316438_21 Ligated ion channel L-glutamate- and glycine-binding site K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 435.0
YHH3_k127_9316438_22 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 416.0
YHH3_k127_9316438_23 PKD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 441.0
YHH3_k127_9316438_24 Dihydrodipicolinate reductase, C-terminus K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 408.0
YHH3_k127_9316438_25 PFAM ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 391.0
YHH3_k127_9316438_26 PFAM MscS Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007369 390.0
YHH3_k127_9316438_27 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 373.0
YHH3_k127_9316438_28 Fibronectin, type III domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 373.0
YHH3_k127_9316438_29 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 361.0
YHH3_k127_9316438_3 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 2.657e-242 753.0
YHH3_k127_9316438_30 Binding-protein-dependent transport system inner membrane component K02029 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 361.0
YHH3_k127_9316438_31 Binding-protein-dependent transport system inner membrane component K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 351.0
YHH3_k127_9316438_32 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 342.0
YHH3_k127_9316438_33 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007025 345.0
YHH3_k127_9316438_34 Radical_SAM C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007424 338.0
YHH3_k127_9316438_35 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003827 334.0
YHH3_k127_9316438_36 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 327.0
YHH3_k127_9316438_37 ABC transporter K02028 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 318.0
YHH3_k127_9316438_38 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 306.0
YHH3_k127_9316438_39 PFAM Curli production assembly transport component CsgG - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 310.0
YHH3_k127_9316438_4 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 - 2.5.1.54 7.15e-242 752.0
YHH3_k127_9316438_40 NAD(P)H dehydrogenase (quinone) activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001167 266.0
YHH3_k127_9316438_41 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001607 243.0
YHH3_k127_9316438_42 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000001869 237.0
YHH3_k127_9316438_43 PFAM amino acid-binding ACT domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000002354 231.0
YHH3_k127_9316438_44 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000000000000000000000000000000000000000001233 216.0
YHH3_k127_9316438_45 RsbT co-antagonist protein rsbRD N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000004675 213.0
YHH3_k127_9316438_46 - - - - 0.0000000000000000000000000000000000000000000000000000000001195 205.0
YHH3_k127_9316438_47 OstA-like protein K09774 - - 0.0000000000000000000000000000000000000000000000000004192 190.0
YHH3_k127_9316438_48 - - - - 0.000000000000000000000000000000000000000000000000168 181.0
YHH3_k127_9316438_49 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000001951 173.0
YHH3_k127_9316438_5 Belongs to the peptidase S41A family K03797 - 3.4.21.102 9.873e-238 756.0
YHH3_k127_9316438_50 PFAM Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000000000000000001206 170.0
YHH3_k127_9316438_51 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.0000000000000000000000000000000000003011 147.0
YHH3_k127_9316438_52 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.000000000000000000000000006285 115.0
YHH3_k127_9316438_54 monooxygenase activity - - - 0.00000000000000005312 83.0
YHH3_k127_9316438_56 ATP synthase K02115 - - 0.00000002966 57.0
YHH3_k127_9316438_57 - - - - 0.000001116 53.0
YHH3_k127_9316438_6 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 1.145e-233 729.0
YHH3_k127_9316438_7 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 5.444e-222 693.0
YHH3_k127_9316438_8 TIGRFAM argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 2.096e-217 682.0
YHH3_k127_9316438_9 PFAM Polysulphide reductase, NrfD K00185 - - 2.767e-207 650.0
YHH3_k127_9340014_0 PFAM Sulphatase-modifying factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 317.0
YHH3_k127_9340014_1 reverse transcriptase - - - 0.000000000000000000000000000000000000000000000000000000000008775 213.0
YHH3_k127_9363658_0 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 336.0
YHH3_k127_9363658_1 serine-type endopeptidase activity - - - 0.0000000000000000004035 101.0
YHH3_k127_9363658_2 serine threonine protein kinase K12132 - 2.7.11.1 0.00003602 48.0
YHH3_k127_9558538_0 Carbohydrate phosphorylase K00688 GO:0000272,GO:0003674,GO:0003824,GO:0004645,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0008144,GO:0008150,GO:0008152,GO:0008184,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0015980,GO:0016052,GO:0016740,GO:0016757,GO:0016758,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0055114,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901575 2.4.1.1 0.0 1053.0
YHH3_k127_9558538_1 Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP- dependent clade X sub-subfamily K00850 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007268 564.0
YHH3_k127_9558538_10 - - - - 0.000000000000000000001521 102.0
YHH3_k127_9558538_12 - - - - 0.000000000001598 75.0
YHH3_k127_9558538_2 glycoside hydrolase, family 13 domain protein K01236 - 3.2.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005652 565.0
YHH3_k127_9558538_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 446.0
YHH3_k127_9558538_4 OmpA family K03286 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 357.0
YHH3_k127_9558538_5 von Willebrand factor (vWF) type A domain K03286 - - 0.0000000000000000000000000000000000000000000000000005362 198.0
YHH3_k127_9558538_6 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000198 167.0
YHH3_k127_9558538_7 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000003084 156.0
YHH3_k127_9558538_8 PFAM HNH endonuclease - - - 0.0000000000000000000000000000000000000002571 153.0
YHH3_k127_9593108_0 pyruvate phosphate dikinase - - - 0.0 1144.0
YHH3_k127_9593108_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 1.387e-239 747.0
YHH3_k127_9593108_2 glutathione-regulated potassium exporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 623.0
YHH3_k127_9593108_3 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 292.0
YHH3_k127_9593108_4 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000005242 254.0
YHH3_k127_9593108_5 PFAM CYTH domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000001898 201.0
YHH3_k127_9593108_6 Subtilase family - - - 0.0000000000000000000000000000000000003981 150.0
YHH3_k127_9690549_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.675e-275 861.0
YHH3_k127_9690549_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000004155 222.0
YHH3_k127_9690549_2 Endonuclease V K05982 - 3.1.21.7 0.000000000000000000000000000000000000002446 154.0
YHH3_k127_9690549_3 Sel1-like repeats. K07126 - - 0.000000000000000000000008686 113.0
YHH3_k127_9690549_4 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0000000000000000000000378 113.0
YHH3_k127_9690549_5 - - - - 0.0005212 51.0
YHH3_k127_9737088_0 cell wall anchor domain - - - 0.00002459 56.0
YHH3_k127_9767251_0 GDP-mannose 4,6 dehydratase - - - 2.017e-199 624.0
YHH3_k127_9767251_1 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005776 449.0
YHH3_k127_9767251_2 glycosyl transferase family 2 K00786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 330.0
YHH3_k127_9767251_3 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000009327 161.0
YHH3_k127_9767251_4 PFAM Sulfotransferase domain - - - 0.000000000000005491 79.0
YHH3_k127_9768831_0 isocitrate dehydrogenase, NADP-dependent, monomeric type K00031 - 1.1.1.42 0.0 1106.0
YHH3_k127_9768831_1 Molecular chaperone. Has ATPase activity K04079 - - 1.692e-303 940.0
YHH3_k127_9768831_10 Amidohydrolase family K05603 - 3.5.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002421 278.0
YHH3_k127_9768831_11 PFAM Phosphoribosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002343 248.0
YHH3_k127_9768831_12 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000003299 228.0
YHH3_k127_9768831_13 triose-phosphate isomerase activity K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000001188 218.0
YHH3_k127_9768831_14 - - - - 0.0000000000000000000000000000000000000000000000000003307 193.0
YHH3_k127_9768831_15 Gram-negative-bacterium-type cell outer membrane assembly - - - 0.000000000000000000000000000000000000009939 149.0
YHH3_k127_9768831_17 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000003706 96.0
YHH3_k127_9768831_18 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00366,K00392 - 1.7.7.1,1.8.7.1 0.000000000000057 74.0
YHH3_k127_9768831_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 618.0
YHH3_k127_9768831_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006161 553.0
YHH3_k127_9768831_4 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007528 545.0
YHH3_k127_9768831_5 dTDP-4-dehydrorhamnose reductase activity K00067,K19997 - 1.1.1.133,5.1.3.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 522.0
YHH3_k127_9768831_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 526.0
YHH3_k127_9768831_7 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 419.0
YHH3_k127_9768831_8 ThiF family K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 351.0
YHH3_k127_9768831_9 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003943 324.0
YHH3_k127_982210_0 type II secretion system K02454 - - 4.217e-285 887.0
YHH3_k127_982210_1 MBOAT, membrane-bound O-acyltransferase family K19294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 578.0
YHH3_k127_982210_2 SGNH hydrolase-like domain, acetyltransferase AlgX - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007364 280.0
YHH3_k127_982210_3 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000000002216 237.0
YHH3_k127_982210_4 PFAM AsmA family protein K07289 - - 0.00000000000000000000000000000000000000000003106 177.0
YHH3_k127_982826_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 0.0 1227.0
YHH3_k127_982826_1 Transcriptional regulator K03655,K10439,K11708 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006478 577.0
YHH3_k127_982826_10 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 295.0
YHH3_k127_982826_11 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K16293 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 292.0
YHH3_k127_982826_12 PFAM Sulphate transporter K03321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002613 286.0
YHH3_k127_982826_13 Putative porin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008703 273.0
YHH3_k127_982826_14 high-affinity sulfate:proton symporter activity K06203 GO:0000096,GO:0000097,GO:0000103,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006520,GO:0006534,GO:0006790,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0008150,GO:0008152,GO:0008271,GO:0008272,GO:0008324,GO:0008509,GO:0008512,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009675,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015103,GO:0015116,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015296,GO:0015318,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0016053,GO:0019344,GO:0019752,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044425,GO:0044459,GO:0044464,GO:0046394,GO:0051179,GO:0051234,GO:0055085,GO:0071704,GO:0071944,GO:0072348,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901682,GO:1902358,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000000000000000000000001067 258.0
YHH3_k127_982826_15 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002442 273.0
YHH3_k127_982826_16 HPP family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002028 242.0
YHH3_k127_982826_17 SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. - - - 0.00000000000000000000000000000000000000000000000000001059 194.0
YHH3_k127_982826_18 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000003066 192.0
YHH3_k127_982826_19 - - - - 0.000000000000000000000000000000000000000000000000001826 184.0
YHH3_k127_982826_2 PFAM amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 526.0
YHH3_k127_982826_20 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.00000000000000000000000000000000000000000000002466 186.0
YHH3_k127_982826_21 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000004855 185.0
YHH3_k127_982826_22 Spermine/spermidine synthase domain - - - 0.00000000000000000000000000000000000003905 153.0
YHH3_k127_982826_23 Domain of unknown function (DUF4156) - - - 0.00000000000000000000000008619 110.0
YHH3_k127_982826_24 TOBE domain - - - 0.00000000000000000002278 92.0
YHH3_k127_982826_25 GIY-YIG catalytic domain protein K07461 - - 0.00000000000000000005969 91.0
YHH3_k127_982826_26 - - - - 0.0000000009924 64.0
YHH3_k127_982826_3 Nucleoside recognition - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 472.0
YHH3_k127_982826_4 TOBE domain K02019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009029 439.0
YHH3_k127_982826_5 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005358 411.0
YHH3_k127_982826_6 PFAM Glucose Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 398.0
YHH3_k127_982826_7 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004241 372.0
YHH3_k127_982826_8 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 343.0
YHH3_k127_982826_9 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 323.0
YHH3_k127_9900764_0 Elongation factor Tu domain 2 K02355 - - 0.0 1015.0
YHH3_k127_9900764_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 1.394e-212 674.0
YHH3_k127_9900764_2 Acts as a magnesium transporter K06213 - - 2.822e-205 648.0
YHH3_k127_9900764_3 PFAM peptidase S1 and S6 chymotrypsin Hap - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 529.0
YHH3_k127_9900764_4 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 522.0
YHH3_k127_9900764_5 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 426.0
YHH3_k127_9900764_6 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005695 320.0
YHH3_k127_9900764_7 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001578 227.0
YHH3_k127_9900764_8 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.000000000000006787 77.0
YHH3_k127_99015_0 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 0.0 1108.0
YHH3_k127_99015_1 Domain of unknown function (DUF4143) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 542.0
YHH3_k127_99015_10 response regulator, receiver K03413 - - 0.000000000000000000000000002688 115.0
YHH3_k127_99015_11 Uncharacterized conserved protein (DUF2196) - - - 0.0000000000000000000000278 100.0
YHH3_k127_99015_13 [2Fe-2S] binding domain K03518,K07302,K13480 - 1.2.5.3,1.3.99.16 0.0002798 43.0
YHH3_k127_99015_2 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 413.0
YHH3_k127_99015_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000001739 258.0
YHH3_k127_99015_4 FtsJ-like methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001755 243.0
YHH3_k127_99015_5 orotate phosphoribosyltransferase activity K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000001101 221.0
YHH3_k127_99015_6 regulation of ryanodine-sensitive calcium-release channel activity - - - 0.00000000000000000000000000000000000000000000000000000000003059 213.0
YHH3_k127_99015_7 Belongs to the UPF0178 family K09768 - - 0.00000000000000000000000000000000000000000000000000000000007759 207.0
YHH3_k127_99015_8 Glyoxalase-like domain K07032 - - 0.0000000000000000000000000000000000000000000000000000000004496 206.0
YHH3_k127_99015_9 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.0000000000000000000000000000000000001249 147.0
YHH3_k127_990386_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 1.702e-307 951.0
YHH3_k127_990386_1 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 2.455e-303 938.0
YHH3_k127_990386_10 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 346.0
YHH3_k127_990386_11 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 341.0
YHH3_k127_990386_12 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 329.0
YHH3_k127_990386_13 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 292.0
YHH3_k127_990386_14 PFAM Imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004294 280.0
YHH3_k127_990386_15 TIGRFAM acetolactate synthase, small subunit K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006302 272.0
YHH3_k127_990386_16 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000003458 268.0
YHH3_k127_990386_17 Protein of unknown function DUF89 K09116 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001941 265.0
YHH3_k127_990386_18 Belongs to the TtcA family K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000001113 244.0
YHH3_k127_990386_19 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000001217 234.0
YHH3_k127_990386_2 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 6.866e-272 863.0
YHH3_k127_990386_20 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000003955 209.0
YHH3_k127_990386_21 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000005899 173.0
YHH3_k127_990386_22 PFAM conserved K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000006092 165.0
YHH3_k127_990386_23 PilZ domain - - - 0.0000000000000000000000000000000000000002402 155.0
YHH3_k127_990386_24 PFAM Rieske 2Fe-2S K02636 - 1.10.9.1 0.000000000000000000000000000000000019 139.0
YHH3_k127_990386_25 - - - - 0.000000000000000000000000000008252 127.0
YHH3_k127_990386_27 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000004677 78.0
YHH3_k127_990386_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 3.366e-240 755.0
YHH3_k127_990386_4 class II (D K and N) K01893 - 6.1.1.22 1.326e-207 653.0
YHH3_k127_990386_5 Protein of unknown function (DUF1343) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004109 529.0
YHH3_k127_990386_6 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003842 413.0
YHH3_k127_990386_7 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 385.0
YHH3_k127_990386_8 Protein of unknown function (DUF1009) K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 383.0
YHH3_k127_990386_9 PFAM Nucleoside recognition - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008066 352.0
YHH3_k127_9911992_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 2.491e-200 639.0
YHH3_k127_9911992_1 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 595.0
YHH3_k127_9911992_10 biotin-[acetyl-CoA-carboxylase] ligase activity K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000000002151 250.0
YHH3_k127_9911992_11 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002505 242.0
YHH3_k127_9911992_12 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000000000001833 211.0
YHH3_k127_9911992_13 ribonuclease P activity K03536,K08998 GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031123,GO:0031404,GO:0031974,GO:0031981,GO:0032991,GO:0033204,GO:0034414,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042301,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901681,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904 3.1.26.5 0.00000000000000000000000000002373 121.0
YHH3_k127_9911992_14 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000000000005979 123.0
YHH3_k127_9911992_15 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000005542 105.0
YHH3_k127_9911992_17 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000005248 69.0
YHH3_k127_9911992_18 Protein conserved in bacteria K15539 - - 0.00000007443 57.0
YHH3_k127_9911992_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003129 512.0
YHH3_k127_9911992_3 PFAM TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 506.0
YHH3_k127_9911992_4 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 450.0
YHH3_k127_9911992_5 ligase activity, forming carbon-carbon bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 322.0
YHH3_k127_9911992_6 Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009098 316.0
YHH3_k127_9911992_7 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003116 274.0
YHH3_k127_9911992_8 PFAM single-stranded nucleic acid binding R3H K06346 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002419 266.0
YHH3_k127_9911992_9 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008822 264.0
YHH3_k127_9995998_0 Aldo/keto reductase family K07079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009422 374.0
YHH3_k127_9995998_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000306 203.0