logo

Overview

ID MAG04623
Name YYD1_bin.2
Sample SMP0124
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Vicinamibacteria
Order Vicinamibacterales
Family UBA2999
Genus Gp6-AA40
Species
Assembly information
Completeness (%) 88.96
Contamination (%) 3.89
GC content (%) 65.0
N50 (bp) 10,143
Genome size (bp) 5,745,984

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes4770

Gene name Description KEGG GOs EC E-value Score Sequence
YYD1_k127_1014857_0 metallopeptidase activity K03568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 515.0
YYD1_k127_1014857_1 Putative modulator of DNA gyrase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 417.0
YYD1_k127_1014857_2 cAMP biosynthetic process - - - 0.000000000000000000000000000000000000000000000006023 186.0
YYD1_k127_1014857_3 Domain of unknown function (DU1801) - - - 0.000000000001507 74.0
YYD1_k127_1023420_0 Protein of unknown function, DUF255 K06888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008277 612.0
YYD1_k127_1023420_1 Alcohol dehydrogenase, iron containing, 1 K11173 GO:0003674,GO:0003824,GO:0004022,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006103,GO:0006520,GO:0006536,GO:0006538,GO:0006539,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0047988,GO:0051186,GO:0055114,GO:0070013,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.1.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009519 498.0
YYD1_k127_1023420_2 - K02172 - - 0.000000000000000000000000000000000006307 149.0
YYD1_k127_1062503_0 protein kinase activity - - - 1.341e-231 748.0
YYD1_k127_1062503_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 483.0
YYD1_k127_1062503_2 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 445.0
YYD1_k127_1062503_3 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 422.0
YYD1_k127_1062503_4 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004036 338.0
YYD1_k127_1062503_5 TRAP transporter T-component - - - 0.0000000000000000000000000000000000000000000000000000000000416 216.0
YYD1_k127_1062503_6 PFAM TRAP dicarboxylate transporter- DctP subunit - - - 0.000000000000000000000000000000000000000000000000000000005311 211.0
YYD1_k127_1063419_0 cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 480.0
YYD1_k127_1063419_1 Enoyl-(Acyl carrier protein) reductase K00034 - 1.1.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 396.0
YYD1_k127_1063419_2 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005507 361.0
YYD1_k127_1063419_3 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000000006495 220.0
YYD1_k127_1063419_4 Belongs to the ompA family - - - 0.000000000000000000001687 106.0
YYD1_k127_1063419_5 Tetratricopeptide repeat - - - 0.000000003412 70.0
YYD1_k127_1071690_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00239,K00244,K00278 GO:0000104,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0022900,GO:0032991,GO:0044237,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803 1.3.5.1,1.3.5.4,1.4.3.16 1.222e-292 907.0
YYD1_k127_1071690_1 nitrite transmembrane transporter activity K08177 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000834 544.0
YYD1_k127_1071690_2 Dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 407.0
YYD1_k127_1071690_3 Succinate dehydrogenase fumarate reductase K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 397.0
YYD1_k127_1071690_4 Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane K00247 - - 0.000000000000000000000000000000002786 130.0
YYD1_k127_1071690_5 Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane K00246 - - 0.000000000000000000000000000000536 134.0
YYD1_k127_1071690_6 - - - - 0.000000000000001808 78.0
YYD1_k127_1125443_0 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 310.0
YYD1_k127_1125443_1 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 303.0
YYD1_k127_1125443_10 LysM domain K01185,K02030,K04043 - 3.2.1.17 0.00000001146 65.0
YYD1_k127_1125443_2 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000003184 258.0
YYD1_k127_1125443_3 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000001189 183.0
YYD1_k127_1125443_4 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.000000000000000000000000000000000000000001764 163.0
YYD1_k127_1125443_5 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000009872 155.0
YYD1_k127_1125443_6 thioesterase K07107 - - 0.0000000000000000000000000000000000362 141.0
YYD1_k127_1125443_7 TIGRFAM Outer membrane assembly lipoprotein YfiO K05807 - - 0.00000000000000000000000000002234 127.0
YYD1_k127_1125443_8 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000004124 114.0
YYD1_k127_1125443_9 Nucleotidyl transferase K00966 - 2.7.7.13 0.00000000000000000002025 93.0
YYD1_k127_1133132_0 receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 457.0
YYD1_k127_1133132_1 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000002131 121.0
YYD1_k127_1133132_2 - - - - 0.000000000000000000000003431 104.0
YYD1_k127_1133132_3 - - - - 0.00000000000000000007264 103.0
YYD1_k127_1133132_4 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system - - - 0.000000009148 62.0
YYD1_k127_1133132_5 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system - - - 0.00007058 50.0
YYD1_k127_1133132_6 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K01637 - 4.1.3.1 0.0008753 49.0
YYD1_k127_1140783_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003472 592.0
YYD1_k127_1140783_1 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000001099 145.0
YYD1_k127_1140783_2 MacB-like periplasmic core domain - - - 0.00000005952 59.0
YYD1_k127_1144589_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008346 462.0
YYD1_k127_1144589_1 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 301.0
YYD1_k127_1144589_2 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000003118 229.0
YYD1_k127_1144589_3 Thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000006592 194.0
YYD1_k127_1144589_4 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000002069 147.0
YYD1_k127_1144589_5 SWI complex, BAF60b domains - - - 0.000000000000000000000000000000007399 132.0
YYD1_k127_1144589_7 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.0000000000000316 75.0
YYD1_k127_1149012_0 glucan 1,4-alpha-glucosidase activity - - - 2.309e-269 847.0
YYD1_k127_1149012_1 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 1.186e-217 698.0
YYD1_k127_1149012_10 PFAM Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000001084 175.0
YYD1_k127_1149012_11 transcriptional regulator - - - 0.00000000000000000000000000000000000000002009 160.0
YYD1_k127_1149012_12 - - - - 0.00000000000000000000000000000000001934 147.0
YYD1_k127_1149012_13 - K22014 - - 0.000000000001482 70.0
YYD1_k127_1149012_2 short-chain alcohol - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 461.0
YYD1_k127_1149012_3 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 355.0
YYD1_k127_1149012_4 DNA methylase K00571 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 329.0
YYD1_k127_1149012_5 Gaf domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002008 282.0
YYD1_k127_1149012_6 Glyoxalase-like domain K08234 - - 0.000000000000000000000000000000000000000000000000000000000000002135 220.0
YYD1_k127_1149012_7 Isochorismatase family - - - 0.000000000000000000000000000000000000000000000000000000005633 209.0
YYD1_k127_1149012_8 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000000005047 190.0
YYD1_k127_1149012_9 Pyridoxamine 5'-phosphate oxidase K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000006868 188.0
YYD1_k127_1156071_0 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 430.0
YYD1_k127_1156071_1 Cytochrome P460 - - - 0.0000000000000000000000000000000000000000000249 164.0
YYD1_k127_1156071_2 Cytochrome P460 - - - 0.00000000000000000000000000006692 115.0
YYD1_k127_1156071_3 epoxide hydrolase K01253,K21159 - 3.3.2.9 0.0000000000000006607 81.0
YYD1_k127_1162252_0 Heat shock 70 kDa protein K04043 - - 5.488e-256 796.0
YYD1_k127_1162252_1 Transglycosylase K05366 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042546,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 577.0
YYD1_k127_1162252_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 407.0
YYD1_k127_1162252_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 357.0
YYD1_k127_1162252_4 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008488 312.0
YYD1_k127_1162252_5 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000001116 163.0
YYD1_k127_1162252_6 Sporulation related domain - - - 0.00002828 54.0
YYD1_k127_1162327_0 protein kinase activity K08884 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004667 523.0
YYD1_k127_1162327_1 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000007142 195.0
YYD1_k127_1162327_2 - - - - 0.000000000000000001925 92.0
YYD1_k127_1162327_3 guanyl-nucleotide exchange factor activity - - - 0.00004178 57.0
YYD1_k127_116695_0 Protein of unknown function (DUF2950) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001261 276.0
YYD1_k127_116695_1 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit - - - 0.00000000000000000000000000000000000000000000000001257 190.0
YYD1_k127_116695_2 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000202 176.0
YYD1_k127_116695_3 Protein of unknown function (DUF3300) - - - 0.00000000000000000000000000000000000000001835 168.0
YYD1_k127_116695_4 - - - - 0.000000000000000000000000008169 117.0
YYD1_k127_116695_5 Periplasmic or secreted lipoprotein - - - 0.00000000000000000000000003108 118.0
YYD1_k127_1172496_0 metallocarboxypeptidase activity K14054 - - 0.0 1109.0
YYD1_k127_1172496_1 - - - - 7.264e-202 654.0
YYD1_k127_1172496_10 PFAM Xylose isomerase - - - 0.00000000000000000000367 108.0
YYD1_k127_1172496_11 Putative zinc- or iron-chelating domain K18475 - - 0.0000002418 63.0
YYD1_k127_1172496_12 domain protein - - - 0.000001519 59.0
YYD1_k127_1172496_2 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 404.0
YYD1_k127_1172496_3 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 365.0
YYD1_k127_1172496_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 301.0
YYD1_k127_1172496_5 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001625 293.0
YYD1_k127_1172496_6 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000006015 239.0
YYD1_k127_1172496_7 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000001096 195.0
YYD1_k127_1172496_8 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000003714 160.0
YYD1_k127_1172496_9 PFAM regulatory protein, MarR - - - 0.0000000000000000000000000006682 120.0
YYD1_k127_1213350_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 3.739e-207 666.0
YYD1_k127_1213350_1 COG0534 Na -driven multidrug efflux pump K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 444.0
YYD1_k127_1213350_10 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000003604 96.0
YYD1_k127_1213350_2 Crystallin, zeta (quinone reductase) K00344 GO:0000166,GO:0003008,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003960,GO:0005198,GO:0005212,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006805,GO:0007600,GO:0007601,GO:0008150,GO:0008152,GO:0009056,GO:0009410,GO:0009987,GO:0016043,GO:0016491,GO:0016651,GO:0016655,GO:0022607,GO:0032501,GO:0036094,GO:0042178,GO:0042221,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050661,GO:0050662,GO:0050877,GO:0050896,GO:0050953,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051716,GO:0055114,GO:0065003,GO:0070402,GO:0070887,GO:0071466,GO:0071840,GO:0097159,GO:1901265,GO:1901363 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 338.0
YYD1_k127_1213350_3 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 304.0
YYD1_k127_1213350_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000006038 237.0
YYD1_k127_1213350_5 PFAM GCN5-related N-acetyltransferase K03824 - - 0.000000000000000000000000000000000000000000000001088 181.0
YYD1_k127_1213350_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000006121 164.0
YYD1_k127_1213350_7 - - - - 0.00000000000000000000000000000000003046 146.0
YYD1_k127_1213350_8 DinB superfamily - - - 0.0000000000000000000000000000004436 129.0
YYD1_k127_1213350_9 - - - - 0.0000000000000000000000000000005848 133.0
YYD1_k127_1214475_0 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001241 286.0
YYD1_k127_1214475_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000003299 252.0
YYD1_k127_1214475_10 Psort location CytoplasmicMembrane, score 10.00 - - - 0.0000000001227 72.0
YYD1_k127_1214475_11 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000007432 64.0
YYD1_k127_1214475_12 Lamin Tail Domain K07004 - - 0.00000008201 63.0
YYD1_k127_1214475_13 peptidyl-tyrosine sulfation - - - 0.000002983 57.0
YYD1_k127_1214475_14 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.0007219 46.0
YYD1_k127_1214475_2 Polysaccharide lyase family 4, domain II - - - 0.00000000000000000000000000000000000000000000000000000000002429 214.0
YYD1_k127_1214475_3 Cytochrome oxidase assembly protein K02259 - - 0.000000000000000000000000000000000000000000000000008877 196.0
YYD1_k127_1214475_4 arylsulfatase A - - - 0.0000000000000000000000000000000000000000000000000269 202.0
YYD1_k127_1214475_5 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000151 188.0
YYD1_k127_1214475_6 Lamin Tail Domain - - - 0.00000000000000000000000000000000000000000000002774 182.0
YYD1_k127_1214475_7 Protein of unknown function (DUF420) - - - 0.00000000000000000000000000000000000006091 146.0
YYD1_k127_1214475_8 Diguanylate cyclase - - - 0.00000000000000000000000007088 123.0
YYD1_k127_1214475_9 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.00000000000000000000000008331 113.0
YYD1_k127_1246603_0 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 443.0
YYD1_k127_1246603_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 437.0
YYD1_k127_1246603_10 Glycosyl transferase, family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000004226 244.0
YYD1_k127_1246603_11 PFAM glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000009218 248.0
YYD1_k127_1246603_12 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000001382 153.0
YYD1_k127_1246603_13 Yqey-like protein K09117 - - 0.000000000000000000000000000001703 134.0
YYD1_k127_1246603_14 Acetyltransferase (GNAT) domain - - - 0.0000000000006144 80.0
YYD1_k127_1246603_15 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000005444 63.0
YYD1_k127_1246603_16 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic - - - 0.0000005104 60.0
YYD1_k127_1246603_2 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005908 427.0
YYD1_k127_1246603_3 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 420.0
YYD1_k127_1246603_4 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 347.0
YYD1_k127_1246603_5 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008149 334.0
YYD1_k127_1246603_6 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 312.0
YYD1_k127_1246603_7 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001387 283.0
YYD1_k127_1246603_8 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003149 284.0
YYD1_k127_1246603_9 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000409 265.0
YYD1_k127_1294723_0 aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006846 374.0
YYD1_k127_1294723_1 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 342.0
YYD1_k127_1294723_2 extracellular solute-binding protein, family 5 K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 334.0
YYD1_k127_1294723_3 Belongs to the DapA family K01714,K22397 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005975,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016830,GO:0016832,GO:0019520,GO:0019752,GO:0032787,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0046176,GO:0046395,GO:0047440,GO:0071704,GO:0072329,GO:1901575 4.1.2.28,4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000007806 244.0
YYD1_k127_1294723_4 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000001318 206.0
YYD1_k127_1294723_5 PFAM Binding-protein-dependent transport system inner membrane component K00759,K02033 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000001453 201.0
YYD1_k127_1294723_6 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000007091 203.0
YYD1_k127_1294723_7 Belongs to the peptidase S8 family K17734 - - 0.00000000000000000000000000002281 128.0
YYD1_k127_1304372_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 7.27e-219 715.0
YYD1_k127_1304372_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 378.0
YYD1_k127_1304372_2 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 347.0
YYD1_k127_1304372_3 PGAP1-like protein - - - 0.00003847 54.0
YYD1_k127_1324857_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 3.613e-200 653.0
YYD1_k127_1324857_1 PFAM deoxyhypusine synthase K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 454.0
YYD1_k127_1324857_10 SMART nuclease (SNase domain-containing protein) K01174 - 3.1.31.1 0.000002769 57.0
YYD1_k127_1324857_2 Molecular chaperone. Has ATPase activity K04079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 407.0
YYD1_k127_1324857_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000002724 187.0
YYD1_k127_1324857_4 DinB family - - - 0.0000000000000000000000000000000000000000005105 163.0
YYD1_k127_1324857_5 DNA-binding transcription factor activity - - - 0.0000000000000000000000000000000000001281 147.0
YYD1_k127_1324857_7 - - - - 0.000000000000000000000902 106.0
YYD1_k127_1324857_8 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.0000000000000000001564 95.0
YYD1_k127_1324857_9 META domain K03929 - - 0.00000000000000001293 89.0
YYD1_k127_1353384_0 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 623.0
YYD1_k127_1353384_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005366 456.0
YYD1_k127_1353384_2 Domain of unknown function (DUF5122) beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000006877 209.0
YYD1_k127_1353384_3 PFAM PemK family protein K07171 - - 0.0000000000000000000000000000000000000005919 153.0
YYD1_k127_1353384_4 PFAM SpoVT AbrB K07172 - - 0.000000000000000000006024 96.0
YYD1_k127_1360088_0 PA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 509.0
YYD1_k127_1360088_1 PA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007348 425.0
YYD1_k127_1360088_2 PFAM glycosyl transferase family 51 K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005967 393.0
YYD1_k127_1360088_3 PFAM Integral membrane protein TerC - - - 0.0000000000000000000000000000000000000000001343 168.0
YYD1_k127_1360088_4 COG2818 3-methyladenine DNA glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000001534 139.0
YYD1_k127_1360088_5 helix_turn_helix, mercury resistance K13640 - - 0.00000000000000000007914 98.0
YYD1_k127_1384122_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 3.208e-196 635.0
YYD1_k127_1384122_1 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008544 501.0
YYD1_k127_1384122_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007306 329.0
YYD1_k127_1384122_3 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 319.0
YYD1_k127_1384122_4 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006263 289.0
YYD1_k127_1384122_5 TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000001032 236.0
YYD1_k127_1387376_0 His Kinase A (phosphoacceptor) domain - - - 0.0 1139.0
YYD1_k127_1387376_1 copper-translocating P-type ATPase K17686 - 3.6.3.54 0.0 1069.0
YYD1_k127_1387376_10 Predicted nucleotidyltransferase K07074 - - 0.00004089 51.0
YYD1_k127_1387376_2 Multicopper oxidase - - - 9.213e-214 679.0
YYD1_k127_1387376_3 Peptidase dimerisation domain K13049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 493.0
YYD1_k127_1387376_4 copper resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 339.0
YYD1_k127_1387376_5 COGs COG5616 integral membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009178 279.0
YYD1_k127_1387376_6 G8 - - - 0.00000000000000000000000000000000000000001708 159.0
YYD1_k127_1387376_7 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.000000000000000005723 91.0
YYD1_k127_1387376_8 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000002827 73.0
YYD1_k127_1387376_9 Peptidase family M48 - - - 0.000007211 52.0
YYD1_k127_1389439_0 PFAM phosphate transporter K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 387.0
YYD1_k127_1389439_1 histidine kinase HAMP region domain protein K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 343.0
YYD1_k127_1389439_10 Membrane protein, TerC K05794 - - 0.0008077 46.0
YYD1_k127_1389439_2 Outer membrane protein beta-barrel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000274 285.0
YYD1_k127_1389439_3 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000877 265.0
YYD1_k127_1389439_4 response regulator K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000342 229.0
YYD1_k127_1389439_5 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000001186 190.0
YYD1_k127_1389439_6 - - - - 0.000000000000000000000000000000000000000000000000001993 195.0
YYD1_k127_1389439_7 Outer membrane protein beta-barrel family - - - 0.000000000000000000000000000000000000000000000000003333 190.0
YYD1_k127_1389439_8 PFAM phosphoesterase, PA-phosphatase related - - - 0.00000000000000003325 91.0
YYD1_k127_1389439_9 - - - - 0.00000000000002281 79.0
YYD1_k127_1399311_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1024.0
YYD1_k127_1399311_1 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 1.922e-198 626.0
YYD1_k127_1399311_2 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000000000000000000003263 122.0
YYD1_k127_1399311_3 von Willebrand factor, type A - - - 0.0000000000000000004202 96.0
YYD1_k127_1399311_4 - - - - 0.00000000000000001401 89.0
YYD1_k127_1399311_5 Mycolic acid cyclopropane synthetase K15467 - 2.1.1.315 0.0003764 51.0
YYD1_k127_1413999_0 Dehydrogenase K00117 - 1.1.5.2 2.325e-275 868.0
YYD1_k127_1413999_1 peroxiredoxin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007397 352.0
YYD1_k127_1413999_2 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000116 215.0
YYD1_k127_1413999_3 Cytochrome c - - - 0.00000000000000000000000000000000000003575 151.0
YYD1_k127_1415821_0 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 493.0
YYD1_k127_1415821_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002336 286.0
YYD1_k127_1415821_2 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001305 274.0
YYD1_k127_1415821_3 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000000000000000000000000005617 138.0
YYD1_k127_1415821_4 PLD-like domain K06131 - - 0.00000000000000000000000000006884 119.0
YYD1_k127_141674_0 Pfam Glycosyl hydrolases family 2, sugar binding domain - - - 5.122e-313 978.0
YYD1_k127_141674_1 Bacterial alpha-L-rhamnosidase C-terminal domain K05989 - 3.2.1.40 2.067e-198 652.0
YYD1_k127_141674_2 Putative esterase K07214 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006507 261.0
YYD1_k127_1458991_0 Patatin-like phospholipase - - - 0.00000000000000000000000000000005808 130.0
YYD1_k127_1458991_1 - - - - 0.0000000000000000000001592 107.0
YYD1_k127_1458991_2 Type VI secretion K11906 - - 0.0000001559 62.0
YYD1_k127_1458991_3 Transposase IS116/IS110/IS902 family - - - 0.00004802 47.0
YYD1_k127_1472427_0 ThiC-associated domain K03147 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 2.164e-259 808.0
YYD1_k127_1472427_1 COG0457 FOG TPR repeat - - - 9.708e-243 768.0
YYD1_k127_1472427_10 ubiE/COQ5 methyltransferase family - - - 0.0009196 50.0
YYD1_k127_1472427_2 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 6.337e-226 717.0
YYD1_k127_1472427_3 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 471.0
YYD1_k127_1472427_4 COG1943 Transposase and inactivated derivatives K07491 - - 0.0000000000000000000000000000000000000000000000000000008951 199.0
YYD1_k127_1472427_5 - - - - 0.0000000000000000000000000000000000000000000000000129 184.0
YYD1_k127_1472427_6 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000000000000000000000000000000000000006033 171.0
YYD1_k127_1472427_7 - - - - 0.00000000000001519 80.0
YYD1_k127_1472427_8 peptidyl-tyrosine sulfation - - - 0.00000000009187 75.0
YYD1_k127_1472427_9 Aminomethyltransferase folate-binding domain - - - 0.00006935 45.0
YYD1_k127_1486156_0 Protein kinase domain K12132 - 2.7.11.1 4.778e-224 724.0
YYD1_k127_1486156_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 337.0
YYD1_k127_1486156_2 DNA topological change K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000005596 275.0
YYD1_k127_1486156_3 Metal-dependent hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000049 246.0
YYD1_k127_1486156_4 serine-type D-Ala-D-Ala carboxypeptidase activity K07259 - 3.4.16.4 0.00000000004248 67.0
YYD1_k127_1486156_5 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000001932 73.0
YYD1_k127_1486226_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 336.0
YYD1_k127_1486226_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000004925 149.0
YYD1_k127_1486226_2 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000001094 130.0
YYD1_k127_1488891_0 Acyl transferase domain in polyketide synthase (PKS) enzymes. - - - 0.0 1417.0
YYD1_k127_1488891_1 PQQ-like domain K00114 - 1.1.2.8 6.546e-237 751.0
YYD1_k127_1488891_2 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000005267 229.0
YYD1_k127_1488891_3 - - - - 0.0000000000000002135 85.0
YYD1_k127_1498708_0 alkaline phosphatase K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 484.0
YYD1_k127_1498708_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007109 344.0
YYD1_k127_1498708_10 polysaccharide catabolic process - - - 0.0007324 51.0
YYD1_k127_1498708_2 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 349.0
YYD1_k127_1498708_3 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000006594 181.0
YYD1_k127_1498708_4 Chromate transporter K07240 - - 0.00000000000000000000000000000000001119 140.0
YYD1_k127_1498708_5 Protein of unknown function (DUF3738) - - - 0.000000000000000000009171 97.0
YYD1_k127_1498708_6 Chromate transporter K07240 - - 0.000000000000000948 89.0
YYD1_k127_1498708_8 23S rRNA-intervening sequence protein - - - 0.000000000005857 70.0
YYD1_k127_1498708_9 oxidoreductase activity - - - 0.000000001697 72.0
YYD1_k127_1498889_0 aconitate hydratase K01681 - 4.2.1.3 0.0 1173.0
YYD1_k127_1498889_1 Belongs to the peptidase M16 family K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 334.0
YYD1_k127_1498889_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000008892 83.0
YYD1_k127_1498889_11 Zinc-dependent metalloprotease - - - 0.00000002886 65.0
YYD1_k127_1498889_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009055,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0022900,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004903 311.0
YYD1_k127_1498889_3 PFAM peptidase M16 domain protein K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 302.0
YYD1_k127_1498889_4 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003499 292.0
YYD1_k127_1498889_5 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000118 224.0
YYD1_k127_1498889_6 - - - - 0.000000000000000000000000003336 119.0
YYD1_k127_1498889_7 - - - - 0.0000000000000000000004409 104.0
YYD1_k127_1498889_8 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000001205 86.0
YYD1_k127_1498889_9 - - - - 0.00000000000005355 79.0
YYD1_k127_1503963_0 nitrite transmembrane transporter activity - - - 6.546e-228 725.0
YYD1_k127_1503963_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 514.0
YYD1_k127_1503963_2 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000002539 218.0
YYD1_k127_1503963_3 - - - - 0.00000000000000000000000000000000201 142.0
YYD1_k127_1503963_4 - - - - 0.000000000000000000000004822 108.0
YYD1_k127_1503963_5 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000783 94.0
YYD1_k127_1503963_8 - - - - 0.0004119 48.0
YYD1_k127_1509558_0 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 524.0
YYD1_k127_1509558_1 - - - - 0.0000000000000000000004387 108.0
YYD1_k127_1509558_2 Ntpase (Nacht family) K12132 - 2.7.11.1 0.000000000000000001419 100.0
YYD1_k127_1509558_3 NACHT domain - - - 0.0000000000000008723 91.0
YYD1_k127_1509558_4 Protein tyrosine kinase - - - 0.00000007649 60.0
YYD1_k127_1509560_0 PQQ-like domain K00114 - 1.1.2.8 2.396e-232 731.0
YYD1_k127_1509560_1 aminopeptidase - - - 9.304e-206 657.0
YYD1_k127_1509560_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003092 276.0
YYD1_k127_1515680_0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007242 604.0
YYD1_k127_1515680_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 587.0
YYD1_k127_1515680_10 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000001787 263.0
YYD1_k127_1515680_11 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000003663 250.0
YYD1_k127_1515680_12 Amidohydrolase family K20810 - 3.5.4.40 0.00000000000000000000000000000000000000000000000000000000000007932 229.0
YYD1_k127_1515680_13 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000795 209.0
YYD1_k127_1515680_14 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000003459 121.0
YYD1_k127_1515680_15 Uncharacterized ACR, COG1399 K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000004379 120.0
YYD1_k127_1515680_16 TonB C terminal - - - 0.000000000000000001183 97.0
YYD1_k127_1515680_17 Ribosomal L32p protein family K02911 - - 0.0000000000000000399 85.0
YYD1_k127_1515680_18 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000009297 77.0
YYD1_k127_1515680_19 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.000000003114 61.0
YYD1_k127_1515680_2 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004785 463.0
YYD1_k127_1515680_20 Domain of unknown function (DUF374) K09778 - - 0.00007574 48.0
YYD1_k127_1515680_3 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003416 417.0
YYD1_k127_1515680_4 TIGRFAM deoxyguanosinetriphosphate triphosphohydrolase K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003056 385.0
YYD1_k127_1515680_5 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 329.0
YYD1_k127_1515680_6 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 317.0
YYD1_k127_1515680_7 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003252 310.0
YYD1_k127_1515680_8 Electron transfer flavoprotein domain K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001198 284.0
YYD1_k127_1515680_9 Enoyl-(Acyl carrier protein) reductase K13370 - 1.1.1.239,1.1.1.62 0.000000000000000000000000000000000000000000000000000000000000000000000000000005852 269.0
YYD1_k127_1519025_0 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 430.0
YYD1_k127_1519025_1 ABC transporter K09697 - 3.6.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 355.0
YYD1_k127_1519025_2 sodium ABC transporter, permease K09696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003881 339.0
YYD1_k127_1519025_3 AAA domain K02450 - - 0.000000000000000000000000000000000000000000000000003039 202.0
YYD1_k127_1519025_4 DNA-templated transcription, initiation - - - 0.000000000000000000000000000000000000000000267 165.0
YYD1_k127_1519025_5 Transcriptional regulator K22293 - - 0.00000000000000000000000000000000000006843 151.0
YYD1_k127_1519025_6 - - - - 0.0000000000000000000000219 106.0
YYD1_k127_1533823_0 Spermine/spermidine synthase domain - - - 5.357e-260 824.0
YYD1_k127_1533823_1 amine dehydrogenase activity K17285 - - 2.977e-239 746.0
YYD1_k127_1533823_10 Belongs to the acetyltransferase family. ArgA subfamily K00619 - 2.3.1.1 0.0000000000000000000000000005258 118.0
YYD1_k127_1533823_11 TIGRFAM phosphohistidine phosphatase SixA K08296 - - 0.000000000000000000000000001468 117.0
YYD1_k127_1533823_12 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000001406 123.0
YYD1_k127_1533823_13 Cold shock protein domain - - - 0.00000000000000000003645 91.0
YYD1_k127_1533823_14 CHAD domain - - - 0.000000001572 68.0
YYD1_k127_1533823_2 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 426.0
YYD1_k127_1533823_3 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005501 380.0
YYD1_k127_1533823_4 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000792 246.0
YYD1_k127_1533823_5 glycerophosphodiester phosphodiesterase activity K01126 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008081,GO:0008889,GO:0009279,GO:0016020,GO:0016787,GO:0016788,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044462,GO:0044464,GO:0046872,GO:0071944 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000003601 251.0
YYD1_k127_1533823_6 - - - - 0.00000000000000000000000000000000000000000000000000000000001358 213.0
YYD1_k127_1533823_7 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000001321 200.0
YYD1_k127_1533823_8 PFAM response regulator receiver K02483,K07658,K07668 - - 0.000000000000000000000000000000000000000000000000000005656 199.0
YYD1_k127_1533823_9 Diacylglycerol kinase catalytic domain - - - 0.00000000000000000000000000000000000000000000000002254 190.0
YYD1_k127_1546529_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006256 436.0
YYD1_k127_1546529_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 325.0
YYD1_k127_1546529_10 - K01992,K19341 - - 0.00000000000000000000000001419 119.0
YYD1_k127_1546529_11 belongs to the aldehyde dehydrogenase family K00294,K22187 - 1.2.1.88 0.0000000000000002012 87.0
YYD1_k127_1546529_12 - - - - 0.00000000000002057 80.0
YYD1_k127_1546529_13 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.00000000007836 68.0
YYD1_k127_1546529_15 Belongs to the peptidase S8 family - - - 0.000007799 57.0
YYD1_k127_1546529_16 Putative diguanylate phosphodiesterase - - - 0.000105 52.0
YYD1_k127_1546529_2 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 320.0
YYD1_k127_1546529_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409,K03070 GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 312.0
YYD1_k127_1546529_4 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000002713 237.0
YYD1_k127_1546529_5 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000001699 214.0
YYD1_k127_1546529_6 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.00000000000000000000000000000000000000000001211 166.0
YYD1_k127_1546529_7 NUDIX domain - - - 0.00000000000000000000000000000000000006976 147.0
YYD1_k127_1546529_8 - - - - 0.00000000000000000000000000004506 129.0
YYD1_k127_1546529_9 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000166 125.0
YYD1_k127_1553922_0 Homeodomain-like domain K07497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003822 379.0
YYD1_k127_1553922_2 - - - - 0.0000000000000000004134 90.0
YYD1_k127_1554228_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 4.79e-204 666.0
YYD1_k127_1554228_1 Phosphatidylethanolamine-binding protein - - - 0.000000000000000000000000008034 121.0
YYD1_k127_1554228_2 amine dehydrogenase activity - - - 0.0000000000000000001433 99.0
YYD1_k127_1554228_3 Cytochrome c - - - 0.000003566 55.0
YYD1_k127_15686_0 Belongs to the transketolase family K00615 - 2.2.1.1 1.08e-220 708.0
YYD1_k127_15686_1 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 610.0
YYD1_k127_15686_11 Methyltransferase domain - - - 0.000000000000000000000000162 116.0
YYD1_k127_15686_2 COGs COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 508.0
YYD1_k127_15686_3 SPTR N-acetylneuraminic acid synthase, N-terminal domain protein K01654 - 2.5.1.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 489.0
YYD1_k127_15686_4 NmrA-like family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 436.0
YYD1_k127_15686_5 cytidylyl-transferase K00983 - 2.7.7.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005235 341.0
YYD1_k127_15686_6 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 323.0
YYD1_k127_15686_7 UDP-N-acetylglucosamine 2-epimerase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005035 295.0
YYD1_k127_15686_8 Dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009812 277.0
YYD1_k127_15686_9 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000002259 201.0
YYD1_k127_1576350_0 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 424.0
YYD1_k127_1576350_1 cAMP biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 430.0
YYD1_k127_1576350_2 His Kinase A (phosphoacceptor) domain K07642 - 2.7.13.3 0.0000000000000000000000000000000000000000000001084 183.0
YYD1_k127_1576350_3 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000001815 164.0
YYD1_k127_1586187_0 PQQ-like domain - - - 2.959e-209 666.0
YYD1_k127_1586187_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000006142 237.0
YYD1_k127_1586187_2 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.0000000000000000000000000000000000000000000356 165.0
YYD1_k127_1586187_3 Protein of unknown function (DUF3738) - - - 0.0000000000000000000000000000000192 135.0
YYD1_k127_1586187_4 - - - - 0.00000000000000000000000000006671 128.0
YYD1_k127_1586187_5 - - - - 0.000000000000000000002222 99.0
YYD1_k127_1586187_6 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00001505 57.0
YYD1_k127_1587639_0 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000001784 216.0
YYD1_k127_1587639_1 DNA polymerase X family K02347 - - 0.0000002329 56.0
YYD1_k127_1595261_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009561 496.0
YYD1_k127_1595261_1 Phosphomethylpyrimidine kinase K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000006531 228.0
YYD1_k127_1595261_2 O-Antigen ligase K18814 - - 0.000000000000000000000000000000000000000000004623 175.0
YYD1_k127_1595261_3 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000000000008768 118.0
YYD1_k127_16035_0 Tetratricopeptide repeat K08884,K12132 - 2.7.11.1 1.659e-272 864.0
YYD1_k127_16035_1 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000000000002198 215.0
YYD1_k127_16035_2 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000000000000000000005457 188.0
YYD1_k127_16035_3 PIN domain - - - 0.00000000000000000000000000000000000000000006187 168.0
YYD1_k127_16035_5 spheroidene monooxygenase K09847 - 1.14.15.9 0.000000003202 60.0
YYD1_k127_1609087_0 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003513 507.0
YYD1_k127_1609087_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009711 254.0
YYD1_k127_1609087_3 Periplasmic or secreted lipoprotein - - - 0.000000000000000002045 93.0
YYD1_k127_1609087_4 PBS lyase HEAT domain protein repeat-containing protein - - - 0.00000000001282 70.0
YYD1_k127_1609087_5 Domain of unknown function (DUF4136) - - - 0.000002466 57.0
YYD1_k127_1644883_0 Cobaltochelatase CobS subunit N terminal K09882 - 6.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 484.0
YYD1_k127_1644883_1 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.000000000000000000000000000000000000000000000000007675 207.0
YYD1_k127_1644883_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000009627 188.0
YYD1_k127_1644883_3 TipAS antibiotic-recognition domain - - - 0.000000001245 69.0
YYD1_k127_1644883_4 Glyoxalase-like domain - - - 0.0000003822 57.0
YYD1_k127_1652975_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 3.986e-229 739.0
YYD1_k127_1652975_1 Zinc transporter K16267 - - 0.000000000000000000000000000000000000000000000000000000000000000000156 237.0
YYD1_k127_1652975_2 BON domain - - - 0.0000000000000000000000000000001377 130.0
YYD1_k127_1652975_3 von Willebrand factor (vWF) type A domain K07114 - - 0.000000000005382 74.0
YYD1_k127_1653578_0 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000001223 245.0
YYD1_k127_1653578_1 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000001577 181.0
YYD1_k127_1653578_2 - - - - 0.000000000006097 78.0
YYD1_k127_1653578_3 Methyltransferase domain - - - 0.0000000004143 67.0
YYD1_k127_1653578_4 UDP-N-acetylglucosamine 2-epimerase activity - - - 0.0000005507 63.0
YYD1_k127_1653578_5 Methyltransferase - - - 0.00001358 57.0
YYD1_k127_1653578_6 - K14340 - - 0.0004529 53.0
YYD1_k127_1655966_0 arylsulfatase activity K01132 - 3.1.6.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006242 545.0
YYD1_k127_1655966_1 PFAM Stage II sporulation E family protein K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000001854 183.0
YYD1_k127_1655966_2 COG0187 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02470,K02622 - 5.99.1.3 0.0000000000000004295 78.0
YYD1_k127_1655966_3 SnoaL-like polyketide cyclase - - - 0.0006732 51.0
YYD1_k127_1666420_0 PBS lyase HEAT-like repeat - - - 3.636e-219 712.0
YYD1_k127_1666420_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 443.0
YYD1_k127_1666420_2 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 370.0
YYD1_k127_1666420_3 Methyltransferase, chemotaxis proteins K00575,K13486 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 312.0
YYD1_k127_1666420_4 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000001325 246.0
YYD1_k127_1666420_5 CheC inhibitor of MCP methylation K03410 - - 0.00000000000000000000000000000000000000000000000000000002047 209.0
YYD1_k127_1666420_6 membrane organization K07277,K09800 - - 0.0000000000000000000000000000000000000001821 169.0
YYD1_k127_1666420_7 Response regulator receiver domain K03413 - - 0.0000000000000000000000000000000001554 137.0
YYD1_k127_1666420_8 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.000000000000000006689 87.0
YYD1_k127_1669099_0 peptidyl-tyrosine sulfation K01277 - 3.4.14.4 3.97e-272 852.0
YYD1_k127_1669099_1 Dehydrogenase K00117,K19813 - 1.1.5.2,1.1.5.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 606.0
YYD1_k127_1669099_2 Putative glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009437 591.0
YYD1_k127_1669099_3 Protein of unknown function (DUF1624) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008971 313.0
YYD1_k127_1669099_4 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.0000000000000000000000000000000000000000000000000000002075 216.0
YYD1_k127_1669099_5 Peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000000000000000000000000006103 186.0
YYD1_k127_1669099_6 NIPSNAP - - - 0.00000000000000000000000000000000000000000006812 165.0
YYD1_k127_1669099_7 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.000000000000000000000000000000000000000002908 169.0
YYD1_k127_1669099_8 YCII-related domain K09780 - - 0.00000000000000000000000000000000001695 139.0
YYD1_k127_1669099_9 Protein of unknown function (DUF1761) - - - 0.00000000000000000000000000000003901 130.0
YYD1_k127_1687429_0 DNA topological change K03168 - 5.99.1.2 3.229e-214 693.0
YYD1_k127_1687429_10 MacB-like periplasmic core domain - - - 0.0000000000000000000005317 97.0
YYD1_k127_1687429_11 - - - - 0.000000000000000154 89.0
YYD1_k127_1687429_13 oxidoreductase activity - - - 0.00000000000000987 85.0
YYD1_k127_1687429_14 - - - - 0.0000000000007649 78.0
YYD1_k127_1687429_15 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000002385 72.0
YYD1_k127_1687429_16 oxidoreductase activity - - - 0.00000002224 65.0
YYD1_k127_1687429_17 Belongs to the phycobilisome linker protein family K05378 - - 0.0000008848 60.0
YYD1_k127_1687429_18 Helix-turn-helix domain - - - 0.0000234 56.0
YYD1_k127_1687429_2 X-Pro dipeptidyl-peptidase (S15 family) K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 435.0
YYD1_k127_1687429_3 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 351.0
YYD1_k127_1687429_4 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001157 284.0
YYD1_k127_1687429_5 PFAM von Willebrand factor type A K07114,K12511 - - 0.000000000000000000000000000000000000000000000000000000007837 212.0
YYD1_k127_1687429_6 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000000000002389 184.0
YYD1_k127_1687429_7 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.00000000000000000000000000000005746 132.0
YYD1_k127_1687429_8 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.000000000000000000000000000007392 127.0
YYD1_k127_1687429_9 ankyrin repeat - - - 0.000000000000000000000000537 121.0
YYD1_k127_1694605_0 Cytochrome c K08685 - 1.4.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 432.0
YYD1_k127_1694605_1 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 421.0
YYD1_k127_1694605_2 alginic acid biosynthetic process K01729 - 4.2.2.3 0.00000000000000000000000000000000000000000000001214 179.0
YYD1_k127_1694605_3 YjbR - - - 0.0000000000000000000000000000000000000004897 154.0
YYD1_k127_1694605_4 - - - - 0.000000000000000000000002761 113.0
YYD1_k127_1694605_5 beta-propeller repeat - - - 0.00000000000000009552 84.0
YYD1_k127_1694605_6 Methyltransferase domain - - - 0.00000000000001837 82.0
YYD1_k127_1710653_0 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000001343 192.0
YYD1_k127_1710653_1 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788,K10810 - 2.5.1.3,5.3.99.10 0.000000000000000000000000000003208 130.0
YYD1_k127_1710653_2 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000007793 105.0
YYD1_k127_1710653_3 - - - - 0.000000000000000000000177 108.0
YYD1_k127_1710653_4 - - - - 0.0000000001697 65.0
YYD1_k127_1710653_5 PFAM Prolyl oligopeptidase family - - - 0.00003653 54.0
YYD1_k127_1710653_6 Protein of unknown function (DUF2442) - - - 0.0001944 45.0
YYD1_k127_1717025_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 5.921e-250 800.0
YYD1_k127_1717025_1 radical SAM domain protein - - - 3.202e-207 657.0
YYD1_k127_1717025_10 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005684 291.0
YYD1_k127_1717025_11 NADPH-dependent FMN reductase K19784 - - 0.000000000000000000000000000000000000000000000008158 180.0
YYD1_k127_1717025_12 PepSY-associated TM region - - - 0.00000000000000000000000000000000000000000000001304 183.0
YYD1_k127_1717025_13 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.0000000000000000000000000000000000000001092 159.0
YYD1_k127_1717025_14 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000001372 147.0
YYD1_k127_1717025_15 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000002375 144.0
YYD1_k127_1717025_16 Cupin 2, conserved barrel domain protein K11477 - - 0.0000000000000000000002499 102.0
YYD1_k127_1717025_17 - - - - 0.000000000000002711 80.0
YYD1_k127_1717025_18 - - - - 0.0000000000003669 81.0
YYD1_k127_1717025_19 Ribosomal protein S20 K02968 - - 0.000000000002561 70.0
YYD1_k127_1717025_2 IgA Peptidase M64 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 548.0
YYD1_k127_1717025_21 Domain of unknown function (DUF4440) - - - 0.00000000005743 69.0
YYD1_k127_1717025_22 - - - - 0.0000000005384 63.0
YYD1_k127_1717025_23 RecX family K03565 - - 0.0000009965 56.0
YYD1_k127_1717025_24 CAAX protease self-immunity - - - 0.00002609 49.0
YYD1_k127_1717025_3 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 483.0
YYD1_k127_1717025_4 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 492.0
YYD1_k127_1717025_5 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005368 407.0
YYD1_k127_1717025_6 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007882 349.0
YYD1_k127_1717025_7 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 353.0
YYD1_k127_1717025_8 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004184 327.0
YYD1_k127_1717025_9 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 299.0
YYD1_k127_1755900_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000122 245.0
YYD1_k127_1755900_1 Sigma-70 region 2 K03088 - - 0.0000000000003789 74.0
YYD1_k127_1759728_0 UDP-N-acetylglucosamine 2-epimerase K08068,K18429 - 3.2.1.183,3.2.1.184 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 392.0
YYD1_k127_1759728_1 NeuB family K01654 - 2.5.1.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 398.0
YYD1_k127_1759728_10 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.0001519 55.0
YYD1_k127_1759728_2 glycosyl transferase group 1 - - - 0.0000000000000000000000008395 121.0
YYD1_k127_1759728_3 aldehyde oxidase and xanthine dehydrogenase a b hammerhead K11177 - 1.17.1.4 0.0000000000000000000000344 102.0
YYD1_k127_1759728_7 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) - - - 0.00000000000177 81.0
YYD1_k127_1759728_8 protein-(glutamine-N5) methyltransferase activity K00571 - 2.1.1.72 0.0000000205 68.0
YYD1_k127_1759728_9 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.0000001655 64.0
YYD1_k127_176406_0 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000003965 174.0
YYD1_k127_176406_1 metal-dependent hydrolase with the TIM-barrel fold - - - 0.00000000000000000000000000000000000000313 156.0
YYD1_k127_1780655_0 Protein of unknown function (DUF2950) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003026 273.0
YYD1_k127_1780655_1 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000918 265.0
YYD1_k127_1780655_2 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.0000107 55.0
YYD1_k127_1781527_0 PQQ-like domain K00114 - 1.1.2.8 5.159e-226 713.0
YYD1_k127_1781527_1 DegT/DnrJ/EryC1/StrS aminotransferase family K12452 - 1.17.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 569.0
YYD1_k127_1781527_2 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00162,K21417 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000819 467.0
YYD1_k127_1781527_3 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K21416 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 358.0
YYD1_k127_1781527_4 Bacterial extracellular solute-binding proteins, family 3 K16254 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002847 284.0
YYD1_k127_1781527_5 NAD-dependent epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000001294 216.0
YYD1_k127_1781527_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000002505 74.0
YYD1_k127_1783001_0 Common central domain of tyrosinase K00505 - 1.14.18.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003252 478.0
YYD1_k127_1783001_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 487.0
YYD1_k127_1797351_0 PFAM LmbE family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 539.0
YYD1_k127_1797351_1 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009414 466.0
YYD1_k127_1797351_2 Polysaccharide biosynthesis protein K01784,K02473 - 5.1.3.2,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 377.0
YYD1_k127_1797351_4 Domain of unknown function (DUF4382) - - - 0.0000000000001353 78.0
YYD1_k127_1797351_5 thioesterase involved in non-ribosomal peptide biosynthesis K01071 - 3.1.2.21 0.0000000000009018 70.0
YYD1_k127_1797351_6 - - - - 0.000000001542 61.0
YYD1_k127_1810741_0 PFAM Type II secretion system protein E K02652 - - 1.243e-232 733.0
YYD1_k127_1810741_1 Glycosyl hydrolase family 57 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008752 538.0
YYD1_k127_1810741_10 lipopolysaccharide transport protein B ATP-binding component of ABC superfamily K01990,K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 332.0
YYD1_k127_1810741_11 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 308.0
YYD1_k127_1810741_12 Belongs to the 'phage' integrase family K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 297.0
YYD1_k127_1810741_13 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 297.0
YYD1_k127_1810741_14 Cobyrinic acid ac-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004999 283.0
YYD1_k127_1810741_15 Permease YjgP YjgQ family protein K07091,K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002609 276.0
YYD1_k127_1810741_16 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.00000000000000000000000000000000000000000000000000000000000000000000000000003663 270.0
YYD1_k127_1810741_17 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009178 259.0
YYD1_k127_1810741_18 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000003475 245.0
YYD1_k127_1810741_19 TolB amino-terminal domain K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019534,GO:0019904,GO:0022857,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901998 - 0.00000000000000000000000000000000000000000000000000000000000000000007473 249.0
YYD1_k127_1810741_2 TIGRFAM acetaldehyde dehydrogenase (acetylating) K00132 - 1.2.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006809 518.0
YYD1_k127_1810741_20 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K02564 - 3.5.99.6 0.00000000000000000000000000000000000000000000000000000000000000005637 229.0
YYD1_k127_1810741_21 chromosome segregation K03497 - - 0.00000000000000000000000000000000000000000000000000000000002675 216.0
YYD1_k127_1810741_22 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000001311 199.0
YYD1_k127_1810741_23 PFAM Type II secretion system F domain K02653 - - 0.000000000000000000000000000000000000000000000000000000345 202.0
YYD1_k127_1810741_24 MotA TolQ ExbB proton channel K03562 - - 0.000000000000000000000000000000000000000000000000000005731 199.0
YYD1_k127_1810741_25 BadF BadG BcrA BcrD - GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006040,GO:0006044,GO:0006082,GO:0006793,GO:0006796,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0045127,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901071,GO:1901135,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000007576 189.0
YYD1_k127_1810741_26 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000115 166.0
YYD1_k127_1810741_27 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000000000000000002201 166.0
YYD1_k127_1810741_28 Mannose-6-phosphate isomerase - - - 0.0000000000000000000000000000000000000000003395 160.0
YYD1_k127_1810741_29 Carbon dioxide concentrating mechanism carboxysome shell protein K04027 - - 0.000000000000000000000000000000000000001796 148.0
YYD1_k127_1810741_3 exonuclease K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 471.0
YYD1_k127_1810741_30 COG2893 Phosphotransferase system, mannose fructose-specific component IIA K02793 - 2.7.1.191 0.00000000000000000000000000000000008667 137.0
YYD1_k127_1810741_31 OmpA family K03640 - - 0.0000000000000000000000000000000003721 141.0
YYD1_k127_1810741_32 PHP domain protein - - - 0.000000000000000000000000000000000507 151.0
YYD1_k127_1810741_33 Predicted permease YjgP/YjgQ family K07091 - - 0.00000000000000000000000000000002697 136.0
YYD1_k127_1810741_34 Type II secretion system protein G K02456 - - 0.0000000000000000000000000001177 121.0
YYD1_k127_1810741_35 Pilus assembly protein K02662 - - 0.00000000000000000000002454 112.0
YYD1_k127_1810741_36 phosphocarrier protein HPr K11189 - - 0.0000000000000000000006219 98.0
YYD1_k127_1810741_37 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000001021 101.0
YYD1_k127_1810741_38 PFAM Type II secretion system F domain K02653 - - 0.000000000000000000008143 96.0
YYD1_k127_1810741_39 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.00000000000000000009817 96.0
YYD1_k127_1810741_4 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 419.0
YYD1_k127_1810741_41 PFAM Uncharacterised BCR, COG1649 - - - 0.00000000000003807 85.0
YYD1_k127_1810741_42 general secretion pathway protein K02456,K02650 - - 0.00000000000004945 85.0
YYD1_k127_1810741_43 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000001454 70.0
YYD1_k127_1810741_44 PFAM Fimbrial assembly family protein K02663 - - 0.000001106 60.0
YYD1_k127_1810741_45 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000001241 60.0
YYD1_k127_1810741_46 lipopolysaccharide transport K09774 - - 0.000006381 59.0
YYD1_k127_1810741_47 TonB C terminal - - - 0.00004235 54.0
YYD1_k127_1810741_48 - - - - 0.0001019 51.0
YYD1_k127_1810741_49 Pilus assembly protein, PilO K02664 - - 0.0001671 51.0
YYD1_k127_1810741_5 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 419.0
YYD1_k127_1810741_6 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 410.0
YYD1_k127_1810741_7 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 375.0
YYD1_k127_1810741_8 Lysin motif K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 355.0
YYD1_k127_1810741_9 Type ii and iii secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 351.0
YYD1_k127_1823620_0 Serine hydrolase (FSH1) - - - 6.177e-246 777.0
YYD1_k127_1823620_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000001972 173.0
YYD1_k127_1837825_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 618.0
YYD1_k127_1837825_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 396.0
YYD1_k127_1837825_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 349.0
YYD1_k127_1837825_3 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000001578 211.0
YYD1_k127_1837825_4 - - - - 0.00000000000000000000000000000009232 136.0
YYD1_k127_1837825_5 - - - - 0.000001289 52.0
YYD1_k127_1847526_0 lysine biosynthetic process via aminoadipic acid - - - 4.189e-216 706.0
YYD1_k127_1847526_1 COG0644 Dehydrogenases (flavoproteins) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003665 534.0
YYD1_k127_1847526_2 Protein of unknown function (DUF3500) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 526.0
YYD1_k127_1847526_3 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008593 438.0
YYD1_k127_1847526_4 Putative neutral zinc metallopeptidase K07054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003611 325.0
YYD1_k127_1851521_0 Dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008737 495.0
YYD1_k127_1851521_1 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005045 376.0
YYD1_k127_1851521_2 domain protein - - - 0.00000000000000000000000000000000000000000000000001737 184.0
YYD1_k127_1851521_3 PQQ-like domain K00117 - 1.1.5.2 0.00000000000000000000000000001437 125.0
YYD1_k127_1851521_4 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007,K21787 - 2.7.9.2 0.000000000000000000004107 94.0
YYD1_k127_1851521_5 - - - - 0.000002317 53.0
YYD1_k127_1856414_0 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004377 262.0
YYD1_k127_1856414_1 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000001237 229.0
YYD1_k127_1856414_2 - - - - 0.0000000000001814 76.0
YYD1_k127_1856414_3 peptidyl-tyrosine sulfation - - - 0.000000000001287 80.0
YYD1_k127_1856414_4 Rieske [2Fe-2S] domain - - - 0.0000000003541 68.0
YYD1_k127_1870573_0 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000444 306.0
YYD1_k127_1870573_1 COG3209 Rhs family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004881 264.0
YYD1_k127_1870573_2 PFAM NADH-Ubiquinone oxidoreductase (complex I), chain 5 L domain protein K00341 - 1.6.5.3 0.00000000000000002255 84.0
YYD1_k127_1897397_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 536.0
YYD1_k127_1897397_1 SpoU rRNA Methylase family - - - 0.0000000000000000000000000000000000000000000008447 169.0
YYD1_k127_1897397_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000728 142.0
YYD1_k127_1897397_3 - - - - 0.000000000000000000002044 109.0
YYD1_k127_1897397_4 protein-glutamate O-methyltransferase activity K00575,K03408,K13924 - 2.1.1.80,3.1.1.61 0.0000000000002022 75.0
YYD1_k127_1897397_5 Beta-lactamase class C - - - 0.0001104 48.0
YYD1_k127_1904803_0 glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 357.0
YYD1_k127_1904803_1 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004749 323.0
YYD1_k127_1904803_2 Putative sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003048 287.0
YYD1_k127_1904803_3 PFAM band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006453 265.0
YYD1_k127_1904803_4 Subtilase family K17734 - - 0.00000000000000000000000000000000000000000000000000000000001143 223.0
YYD1_k127_1904803_6 PadR family transcriptional regulator K10947 - - 0.00000000000000000000000000000000008749 136.0
YYD1_k127_1904803_7 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.000000000000000008983 88.0
YYD1_k127_1904803_8 Patatin-like phospholipase K07001 - - 0.00000000000425 77.0
YYD1_k127_1904803_9 determination of stomach left/right asymmetry K10407 - - 0.00000000001235 76.0
YYD1_k127_1913271_1 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000004244 149.0
YYD1_k127_1913271_2 Surface antigen - - - 0.000000000000006368 87.0
YYD1_k127_1918502_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 524.0
YYD1_k127_1918502_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000004388 229.0
YYD1_k127_1918502_2 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000002469 129.0
YYD1_k127_1943969_0 NPCBM/NEW2 domain K07407 - 3.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 611.0
YYD1_k127_1943969_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.000000000000000000000000000000000000000000000000004582 185.0
YYD1_k127_1943969_2 - - - - 0.000000006614 59.0
YYD1_k127_1943969_3 Methyltransferase domain - - - 0.00001525 53.0
YYD1_k127_1943969_4 Methyltransferase domain - - - 0.0002232 52.0
YYD1_k127_1943969_5 Beta-lactamase superfamily domain - - - 0.0006341 44.0
YYD1_k127_1952474_0 Aminomethyltransferase folate-binding domain K15064 - - 2.233e-242 754.0
YYD1_k127_1952474_1 Uncharacterised MFS-type transporter YbfB K05548,K05819,K08195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009144 503.0
YYD1_k127_1952474_2 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 503.0
YYD1_k127_1952474_3 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000004288 190.0
YYD1_k127_1952474_4 peptidyl-tyrosine sulfation - - - 0.000000000000000000000004471 117.0
YYD1_k127_1952474_5 Penicillinase repressor - - - 0.00004587 46.0
YYD1_k127_1960665_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00850,K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005768 403.0
YYD1_k127_1960665_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 336.0
YYD1_k127_1960665_10 FR47-like protein K18816 - 2.3.1.82 0.0000000000000000000000000001425 117.0
YYD1_k127_1960665_11 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000003369 118.0
YYD1_k127_1960665_13 peptidyl-tyrosine sulfation - - - 0.0000000000001432 84.0
YYD1_k127_1960665_2 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004238 337.0
YYD1_k127_1960665_3 Type ii and iii secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 326.0
YYD1_k127_1960665_4 DNA polymerase X family K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005647 277.0
YYD1_k127_1960665_5 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000184 250.0
YYD1_k127_1960665_6 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000003889 210.0
YYD1_k127_1960665_7 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000006277 177.0
YYD1_k127_1960665_8 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000561 164.0
YYD1_k127_1960665_9 pilus assembly protein K02662 - - 0.000000000000000000000000000000000000000001421 160.0
YYD1_k127_1965286_0 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000768 397.0
YYD1_k127_1965286_1 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000001378 258.0
YYD1_k127_1965286_2 DNA topological change K03168 - 5.99.1.2 0.000000003202 60.0
YYD1_k127_1965286_3 S-layer homology domain - - - 0.000000003413 61.0
YYD1_k127_1976291_0 efflux transmembrane transporter activity - - - 5.953e-305 960.0
YYD1_k127_1976291_1 pyrroloquinoline quinone binding K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007186 260.0
YYD1_k127_1976291_2 - - - - 0.000000000000000000000000000000000000000000000000000003115 199.0
YYD1_k127_1976291_3 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000001762 204.0
YYD1_k127_1976291_4 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000000000836 162.0
YYD1_k127_1976291_5 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000000000004661 149.0
YYD1_k127_1982164_0 - - - - 0.00000000000000000000000000000003153 130.0
YYD1_k127_1982164_1 - - - - 0.0000000000000000000004067 108.0
YYD1_k127_1982164_2 - - - - 0.00000000000000000002257 102.0
YYD1_k127_1982164_3 Acetyltransferase (GNAT) family - - - 0.000000000000000004823 95.0
YYD1_k127_1982164_4 - - - - 0.000000000002325 78.0
YYD1_k127_1982164_5 - - - - 0.0000000009077 66.0
YYD1_k127_1982164_6 Metallo-beta-lactamase superfamily - - - 0.0003509 52.0
YYD1_k127_2000858_0 B12 binding domain - - - 2.506e-228 719.0
YYD1_k127_2000858_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 349.0
YYD1_k127_2000858_10 Transcriptional regulatory protein, C terminal - - - 0.0000000000000001089 93.0
YYD1_k127_2000858_2 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000001957 197.0
YYD1_k127_2000858_3 Lytic polysaccharide mono-oxygenase, cellulose-degrading - - - 0.00000000000000000000000000000000000000000000000006297 194.0
YYD1_k127_2000858_4 - - - - 0.0000000000000000000000000000000000000000001203 163.0
YYD1_k127_2000858_5 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000000002163 141.0
YYD1_k127_2000858_6 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000004863 145.0
YYD1_k127_2000858_7 HAD-hyrolase-like - - - 0.00000000000000000000000004588 117.0
YYD1_k127_2000858_8 - - - - 0.0000000000000000002989 100.0
YYD1_k127_2000858_9 gag-polyprotein putative aspartyl protease - - - 0.000000000000000005735 94.0
YYD1_k127_2039120_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004373 548.0
YYD1_k127_2039120_1 PFAM FAD linked oxidase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 355.0
YYD1_k127_2041636_0 DNA topological change K03168 - 5.99.1.2 7.429e-213 689.0
YYD1_k127_2041636_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 527.0
YYD1_k127_2041636_2 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 479.0
YYD1_k127_2041636_3 ankyrin repeat K15503 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 451.0
YYD1_k127_2041636_4 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000003898 154.0
YYD1_k127_2041636_5 Chromate resistance exported protein - - - 0.00000000000000000000000001606 113.0
YYD1_k127_2041636_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000007569 57.0
YYD1_k127_2043821_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1155.0
YYD1_k127_2043821_1 C-terminus of AA_permease K03294 - - 3.974e-233 730.0
YYD1_k127_2043821_10 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000003774 152.0
YYD1_k127_2043821_11 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000000000000000000000002936 126.0
YYD1_k127_2043821_12 thymidylate kinase K00943 GO:0003674,GO:0003824,GO:0004550,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006165,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000005453 129.0
YYD1_k127_2043821_13 NlpC/P60 family K13694,K21471 - 3.4.17.13 0.0000000000000000000000000000005453 129.0
YYD1_k127_2043821_14 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000006166 132.0
YYD1_k127_2043821_15 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000001452 117.0
YYD1_k127_2043821_17 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000005371 88.0
YYD1_k127_2043821_18 - - - - 0.00000000000004418 82.0
YYD1_k127_2043821_19 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000001518 70.0
YYD1_k127_2043821_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000461 387.0
YYD1_k127_2043821_20 - - - - 0.000001168 59.0
YYD1_k127_2043821_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 370.0
YYD1_k127_2043821_4 Carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 372.0
YYD1_k127_2043821_5 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0008654,GO:0008759,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007808 284.0
YYD1_k127_2043821_6 Protein of unknown function (DUF418) K07148 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004528 263.0
YYD1_k127_2043821_7 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001047 251.0
YYD1_k127_2043821_8 HNH nucleases - - - 0.000000000000000000000000000000000000000000000000000000000000000001493 232.0
YYD1_k127_2043821_9 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000003757 166.0
YYD1_k127_2045923_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000928 599.0
YYD1_k127_2045923_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 478.0
YYD1_k127_2045923_10 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000149 79.0
YYD1_k127_2045923_11 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000004556 71.0
YYD1_k127_2045923_12 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000000888 70.0
YYD1_k127_2045923_13 Ribosomal protein L30p/L7e K02907 - - 0.00000000002217 74.0
YYD1_k127_2045923_2 Metallopeptidase family M24 K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 314.0
YYD1_k127_2045923_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 293.0
YYD1_k127_2045923_4 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000004052 219.0
YYD1_k127_2045923_5 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000004089 197.0
YYD1_k127_2045923_6 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000007862 181.0
YYD1_k127_2045923_7 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000002417 179.0
YYD1_k127_2045923_8 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000002731 168.0
YYD1_k127_2045923_9 Ribosomal protein L17 K02879 - - 0.000000000000000000000000000000000007223 143.0
YYD1_k127_2050698_0 peptidyl-tyrosine sulfation K01277 - 3.4.14.4 3.474e-264 833.0
YYD1_k127_2050698_1 peptidase S9B dipeptidylpeptidase IV domain protein K01278 - 3.4.14.5 2.009e-197 640.0
YYD1_k127_2050698_2 Beta-Casp domain K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009134 475.0
YYD1_k127_2050698_3 Short-chain dehydrogenase reductase SDR K03793 - 1.5.1.33 0.000000000000000000000000000000000000000001336 170.0
YYD1_k127_2050698_4 PFAM Aminotransferase class I and II - - - 0.000000000000004661 81.0
YYD1_k127_2050698_5 Major facilitator Superfamily - - - 0.0000000000006173 79.0
YYD1_k127_205489_0 cellulose binding - - - 2.489e-222 690.0
YYD1_k127_205489_1 Acetyl-coenzyme A transporter 1 K08218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 571.0
YYD1_k127_205489_10 - - - - 0.0000000000000000000000003025 118.0
YYD1_k127_205489_11 thiolester hydrolase activity K01259,K06889,K12269 - 3.4.11.5 0.000000000003271 76.0
YYD1_k127_205489_12 STAS domain - - - 0.00000000493 62.0
YYD1_k127_205489_13 - K01992 - - 0.00000006332 63.0
YYD1_k127_205489_14 PFAM von Willebrand factor type A domain - - - 0.0001615 53.0
YYD1_k127_205489_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005086 445.0
YYD1_k127_205489_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002632 283.0
YYD1_k127_205489_4 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000005184 202.0
YYD1_k127_205489_5 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.0000000000000000000000000000000000000000001144 161.0
YYD1_k127_205489_6 - - - - 0.000000000000000000000000000000000000000003923 160.0
YYD1_k127_205489_7 Transcriptional regulator K07978,K07979 - - 0.000000000000000000000000000000000001771 143.0
YYD1_k127_205489_8 - - - - 0.00000000000000000000000000000000001161 149.0
YYD1_k127_205489_9 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000002536 145.0
YYD1_k127_2093811_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 319.0
YYD1_k127_2093811_1 protein-glutamate O-methyltransferase activity K00575,K03408,K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 303.0
YYD1_k127_2093811_2 - - - - 0.000000000000000000000000000000000000000000000000005861 194.0
YYD1_k127_2093811_3 - - - - 0.0000000000000000000000000000000000000000008761 171.0
YYD1_k127_2093811_4 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000000000000000000000000000000003076 153.0
YYD1_k127_209404_0 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 400.0
YYD1_k127_209404_1 Glucose sorbosone K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 302.0
YYD1_k127_209404_2 COG4993 Glucose dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000006682 246.0
YYD1_k127_209404_3 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000000005803 181.0
YYD1_k127_209404_6 - - - - 0.000000001036 63.0
YYD1_k127_2102935_0 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000852 371.0
YYD1_k127_2102935_1 COG4313 Protein involved in meta-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000000000000000002413 224.0
YYD1_k127_2102935_2 transcription factor binding K15836 - - 0.00000000000000000868 86.0
YYD1_k127_2102935_3 Belongs to the ompA family K03640 - - 0.0000000000000001762 93.0
YYD1_k127_2105393_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1050.0
YYD1_k127_2105393_1 Type I phosphodiesterase / nucleotide pyrophosphatase K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005058 408.0
YYD1_k127_2105393_2 MotA TolQ ExbB proton channel K03561,K03562 - - 0.000000000000000000000000000000000000000000000000000000000000001349 228.0
YYD1_k127_2105393_3 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000009999 151.0
YYD1_k127_2105393_4 TIGRFAM TonB K03832 - - 0.00000000000000000000000000000000000007338 151.0
YYD1_k127_2105393_5 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.00000000000000000000001569 105.0
YYD1_k127_2105393_6 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000000000117 96.0
YYD1_k127_2112154_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 2.916e-313 979.0
YYD1_k127_2112154_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000254 241.0
YYD1_k127_2113118_0 Epoxide hydrolase N terminus K01253,K21159 - 3.3.2.9 9.233e-228 714.0
YYD1_k127_2113118_1 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 412.0
YYD1_k127_2113118_2 SelR domain K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000002956 216.0
YYD1_k127_2113118_3 zinc transporter K07238 - - 0.0000000000000000000000000000000000000000000000000002213 194.0
YYD1_k127_2113118_4 Cytochrome P460 - - - 0.00000000000000000000000000000000000000000000001036 177.0
YYD1_k127_2113118_5 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000002803 71.0
YYD1_k127_2118947_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 448.0
YYD1_k127_2118947_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003993 447.0
YYD1_k127_2118947_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 415.0
YYD1_k127_2118947_3 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000001339 254.0
YYD1_k127_2118947_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000001031 242.0
YYD1_k127_2118947_5 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0000000000000000000000000000000000000000000000003047 182.0
YYD1_k127_2118947_6 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000001766 159.0
YYD1_k127_2118947_7 Preprotein translocase subunit K03210 - - 0.0000000000000000001005 93.0
YYD1_k127_2127787_0 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000001209 273.0
YYD1_k127_2127787_1 Glycosyl transferase family group 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000003206 236.0
YYD1_k127_2127787_2 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000001218 211.0
YYD1_k127_2127787_3 PFAM Glycosyl transferase family 2 K07011 - - 0.00000000000000000000000000000000000000000000007369 180.0
YYD1_k127_2145411_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 1.966e-231 725.0
YYD1_k127_2145411_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 4.402e-223 721.0
YYD1_k127_2145411_10 glucose sorbosone - - - 0.0000000000003344 72.0
YYD1_k127_2145411_2 Iron-regulated membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002941 444.0
YYD1_k127_2145411_3 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 399.0
YYD1_k127_2145411_4 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006282 322.0
YYD1_k127_2145411_5 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 302.0
YYD1_k127_2145411_6 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008464 281.0
YYD1_k127_2145411_7 Transposase proposed to express due to -1 translational frameshift at the sequence 5'-AAAAAC-3' - - - 0.0000000000000000000000000000000000000000000000000000000000000000001886 237.0
YYD1_k127_2145411_8 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000000000000000000001397 207.0
YYD1_k127_2145411_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000001957 73.0
YYD1_k127_2167706_0 Tannase and feruloyl esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007469 581.0
YYD1_k127_2167706_1 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005605 558.0
YYD1_k127_2167706_10 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000001706 100.0
YYD1_k127_2167706_11 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.0000000000384 72.0
YYD1_k127_2167706_12 COG0346 Lactoylglutathione lyase and related lyases - - - 0.0000000003557 68.0
YYD1_k127_2167706_13 Protein of unknown function (DUF3738) - - - 0.00001155 48.0
YYD1_k127_2167706_2 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 390.0
YYD1_k127_2167706_3 pfam nudix - - - 0.000000000000000000000000000000000000000000000000000004915 196.0
YYD1_k127_2167706_4 - - - - 0.000000000000000000000000000000000000009651 158.0
YYD1_k127_2167706_5 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000002485 145.0
YYD1_k127_2167706_6 PFAM peptidase S1 and S6, chymotrypsin Hap - - - 0.000000000000000000000000000001305 130.0
YYD1_k127_2167706_7 - - - - 0.000000000000000000000000005167 121.0
YYD1_k127_2167706_8 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.0000000000000000000000001123 113.0
YYD1_k127_2179731_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 518.0
YYD1_k127_2179731_1 Protein of unknown function (DUF3565) - - - 0.0000000000000000000000006202 110.0
YYD1_k127_2179731_2 peptidase K01181 - 3.2.1.8 0.000000000000003992 76.0
YYD1_k127_218111_0 response regulator K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 451.0
YYD1_k127_218111_1 Citrate transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 349.0
YYD1_k127_218111_2 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 300.0
YYD1_k127_218111_3 PFAM alanine racemase domain protein K20757 - 4.3.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 297.0
YYD1_k127_218111_4 FAD linked oxidases, C-terminal domain K06911 - - 0.00000000000000000000000000000000836 130.0
YYD1_k127_218111_5 YjbR - - - 0.000000000000001403 87.0
YYD1_k127_218111_6 DinB superfamily - - - 0.00000000000001955 81.0
YYD1_k127_2187982_0 Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004215 284.0
YYD1_k127_2187982_1 Aldehyde dehydrogenase K00135 GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004777,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006105,GO:0006520,GO:0006536,GO:0006538,GO:0006540,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009013,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009266,GO:0009314,GO:0009408,GO:0009416,GO:0009448,GO:0009450,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0009987,GO:0016054,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0019752,GO:0031974,GO:0032787,GO:0036094,GO:0042133,GO:0042135,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0046872,GO:0046914,GO:0048037,GO:0050662,GO:0050896,GO:0051287,GO:0055114,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0072329,GO:0072593,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.2.1.16,1.2.1.20,1.2.1.79 0.00000000000000000000000000000000000000000000007356 169.0
YYD1_k127_2187982_2 Protein of unknown function (DUF3237) - - - 0.000000000000000000000000000007844 138.0
YYD1_k127_2187982_3 Bacterial-like globin K06886 - - 0.00000000000000000001933 108.0
YYD1_k127_2192711_0 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003845 271.0
YYD1_k127_2192711_1 competence protein COMEC - - - 0.00000000000000000000000000000000000000000005033 177.0
YYD1_k127_2192711_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000005429 167.0
YYD1_k127_2195438_0 PFAM glycosyl transferase family 51 K05366,K21464 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 441.0
YYD1_k127_2195438_1 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000002192 173.0
YYD1_k127_2195438_2 WHG domain - - - 0.00000000000000000002094 97.0
YYD1_k127_2206219_0 Protein of unknown function (DUF1624) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009188 516.0
YYD1_k127_2206219_1 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 359.0
YYD1_k127_2206219_2 cytochrome - - - 0.00000000000000000000000000000000000000000000000000000000000000000536 237.0
YYD1_k127_2206219_3 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000461 240.0
YYD1_k127_2206219_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000000002734 203.0
YYD1_k127_2206219_5 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000001724 141.0
YYD1_k127_2206219_6 PQQ enzyme repeat K00117 - 1.1.5.2 0.0000000000000000000000005395 112.0
YYD1_k127_2206219_7 - - - - 0.000000000000000001062 94.0
YYD1_k127_220878_0 polyribonucleotide nucleotidyltransferase activity K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 6.959e-232 737.0
YYD1_k127_220878_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.156e-204 670.0
YYD1_k127_220878_10 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000002412 116.0
YYD1_k127_220878_11 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117,K03646 - - 0.0000000000000006749 81.0
YYD1_k127_220878_12 Protein of unknown function (DUF503) K09764 - - 0.00000000000004767 79.0
YYD1_k127_220878_13 Cupredoxin-like domain K00376 - 1.7.2.4 0.00000001025 61.0
YYD1_k127_220878_14 Putative adhesin - - - 0.0003622 52.0
YYD1_k127_220878_15 Protein of unknown function (DUF3738) - - - 0.0008007 44.0
YYD1_k127_220878_2 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000445 444.0
YYD1_k127_220878_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 382.0
YYD1_k127_220878_4 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 337.0
YYD1_k127_220878_5 Peptidase M48 K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000003987 269.0
YYD1_k127_220878_6 DHH family K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000008651 237.0
YYD1_k127_220878_7 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000007162 224.0
YYD1_k127_220878_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000002948 209.0
YYD1_k127_220878_9 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000424 138.0
YYD1_k127_2264294_0 TIGRFAM oligoendopeptidase, M3 family K08602 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 627.0
YYD1_k127_2264294_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 430.0
YYD1_k127_2264294_10 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000288 188.0
YYD1_k127_2264294_11 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000003415 179.0
YYD1_k127_2264294_12 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000003337 150.0
YYD1_k127_2264294_13 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000008139 129.0
YYD1_k127_2264294_14 PFAM O-methyltransferase - - - 0.000000000000000000000000003115 119.0
YYD1_k127_2264294_15 protein histidine kinase activity - - - 0.00000000000006017 78.0
YYD1_k127_2264294_16 - - - - 0.0000000000001424 76.0
YYD1_k127_2264294_17 Antibiotic biosynthesis monooxygenase - - - 0.000002145 55.0
YYD1_k127_2264294_2 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007442 429.0
YYD1_k127_2264294_3 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008231 397.0
YYD1_k127_2264294_4 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 380.0
YYD1_k127_2264294_5 cAMP biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 352.0
YYD1_k127_2264294_6 Arginase family K01476 - 3.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 314.0
YYD1_k127_2264294_7 Uncharacterized conserved protein (COG2071) K09166 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001782 263.0
YYD1_k127_2264294_8 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000762 208.0
YYD1_k127_2264294_9 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000004183 182.0
YYD1_k127_2269812_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1365.0
YYD1_k127_2269812_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 612.0
YYD1_k127_2269812_11 Fibronectin type III-like domain K05349 - 3.2.1.21 0.0000004345 62.0
YYD1_k127_2269812_2 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006112 587.0
YYD1_k127_2269812_3 von Willebrand factor (vWF) type A domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 509.0
YYD1_k127_2269812_4 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00627 GO:0003674,GO:0003824,GO:0004742,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016407,GO:0016417,GO:0016418,GO:0016740,GO:0016746,GO:0016747,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030523,GO:0031405,GO:0031406,GO:0032787,GO:0032991,GO:0033293,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045254,GO:0046390,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1902494,GO:1990204 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008466 458.0
YYD1_k127_2269812_5 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005927 295.0
YYD1_k127_2269812_6 uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000003008 260.0
YYD1_k127_2269812_7 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000001801 209.0
YYD1_k127_2269812_8 Beta-lactamase superfamily domain K17837 - 3.5.2.6 0.000000000000000000000000000000000000000000005563 173.0
YYD1_k127_2269812_9 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.00000000000000000000000000000000006576 141.0
YYD1_k127_2281150_0 Cystathionine beta-synthase K01697 - 4.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 610.0
YYD1_k127_2281150_1 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 586.0
YYD1_k127_2281150_2 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000000000000000002035 220.0
YYD1_k127_2281150_3 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000000000000000233 215.0
YYD1_k127_2281150_4 PFAM amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000001641 219.0
YYD1_k127_2281150_6 SnoaL-like domain - - - 0.0000000000000000000000000000000000000002462 156.0
YYD1_k127_2281150_7 nuclear chromosome segregation - - - 0.000000000000000000000000000000000004588 152.0
YYD1_k127_2285207_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 2.422e-281 882.0
YYD1_k127_2285207_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 588.0
YYD1_k127_2285207_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003527 500.0
YYD1_k127_2285207_3 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 406.0
YYD1_k127_2285207_4 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000002771 238.0
YYD1_k127_2285207_5 Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000000000000000000000004886 216.0
YYD1_k127_2285207_6 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000000002626 164.0
YYD1_k127_2285207_7 - - - - 0.0000000000000003441 82.0
YYD1_k127_2285207_8 - - - - 0.000000000000003219 75.0
YYD1_k127_2324991_0 asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 601.0
YYD1_k127_2324991_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 568.0
YYD1_k127_2324991_2 Elongator protein 3, MiaB family, Radical SAM K06936 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 334.0
YYD1_k127_2324991_3 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.000000000000000000000000000000000000000000000000000005816 193.0
YYD1_k127_2324991_4 PFAM 4-hydroxyphenylacetate 3-hydroxylase K00483 - 1.14.14.9 0.0000000000000000000000000000000000000000000000002999 178.0
YYD1_k127_2324991_5 Flavin reductase like domain - - - 0.000000000000000000000000000000000002052 143.0
YYD1_k127_2324991_6 - - - - 0.0000000000005268 71.0
YYD1_k127_2326687_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 1.568e-213 696.0
YYD1_k127_2326687_1 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 588.0
YYD1_k127_2326687_2 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009276 387.0
YYD1_k127_2326687_3 Histidine kinase-like ATPase domain K01338,K04757,K06379,K08282,K17752 - 2.7.11.1,3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000003015 234.0
YYD1_k127_2326687_4 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000000000000000007335 93.0
YYD1_k127_2326687_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000004525 63.0
YYD1_k127_2326687_6 protein kinase activity - - - 0.000000001209 63.0
YYD1_k127_2333488_0 TonB dependent receptor - - - 2.664e-197 642.0
YYD1_k127_2333488_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001818 283.0
YYD1_k127_2333488_2 Outer membrane efflux protein K15725 - - 0.00000000000000000000000000000000000001333 159.0
YYD1_k127_2333488_4 PFAM Carbohydrate-selective porin OprB - - - 0.0000000000000000000000000000000176 145.0
YYD1_k127_2333488_5 40-residue YVTN family beta-propeller repeat - - - 0.000000000000000000000000001576 126.0
YYD1_k127_2347861_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 1.18e-321 1009.0
YYD1_k127_2347861_1 Carboxypeptidase regulatory-like domain - - - 1.736e-290 921.0
YYD1_k127_2347861_10 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000001119 128.0
YYD1_k127_2347861_11 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000001768 93.0
YYD1_k127_2347861_12 Haloacid dehalogenase-like hydrolase K07025 - - 0.00000000000000000002229 100.0
YYD1_k127_2347861_13 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000000004251 85.0
YYD1_k127_2347861_14 - - - - 0.000000000225 69.0
YYD1_k127_2347861_15 Tetratricopeptide TPR_2 repeat protein K12600 - - 0.0000001536 63.0
YYD1_k127_2347861_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 2.112e-279 883.0
YYD1_k127_2347861_3 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 6.786e-248 784.0
YYD1_k127_2347861_4 PFAM peptidase M16 domain protein K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 344.0
YYD1_k127_2347861_5 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000002578 270.0
YYD1_k127_2347861_6 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000296 248.0
YYD1_k127_2347861_7 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000004163 217.0
YYD1_k127_2347861_8 Endoribonuclease L-PSP K09022 GO:0003674,GO:0003824,GO:0016787,GO:0019239 3.5.99.10 0.000000000000000000000000000000000000009824 152.0
YYD1_k127_2347861_9 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.00000000000000000000000000000004626 140.0
YYD1_k127_2354034_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005689 632.0
YYD1_k127_2354034_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000001037 147.0
YYD1_k127_2354034_2 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000002878 94.0
YYD1_k127_2367442_0 - - - - 0.000000000000000000000000000000000000000000000000000000009219 211.0
YYD1_k127_2367442_1 Ricin-type beta-trefoil - - - 0.0000000000000000000000000000000002168 141.0
YYD1_k127_2367442_2 deacetylase - - - 0.000000000000000000003844 105.0
YYD1_k127_2367442_3 glycoside hydrolase, family - - - 0.000000000000000003374 93.0
YYD1_k127_2367442_4 Pectate lyase superfamily protein - - - 0.00004461 53.0
YYD1_k127_2367442_5 PKD domain - - - 0.000176 44.0
YYD1_k127_237276_0 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003366 257.0
YYD1_k127_237276_1 O-acyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000001923 244.0
YYD1_k127_237276_2 bacterial OsmY and nodulation domain - - - 0.00000000000000000000000000000000000000000000000000000001189 206.0
YYD1_k127_237276_3 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.00000000000000000000000000001377 126.0
YYD1_k127_237276_4 Nitroreductase family - - - 0.0000000000000000000000000002232 118.0
YYD1_k127_237276_5 Surface antigen - - - 0.00000000000000002337 96.0
YYD1_k127_237276_6 Nitroreductase family - - - 0.00000000003637 69.0
YYD1_k127_237276_7 - - - - 0.0000000004566 69.0
YYD1_k127_237972_0 MacB-like periplasmic core domain - - - 1.271e-285 901.0
YYD1_k127_237972_1 transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 608.0
YYD1_k127_237972_2 Pyridoxal-dependent decarboxylase conserved domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 571.0
YYD1_k127_237972_3 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009444 449.0
YYD1_k127_237972_4 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000369 214.0
YYD1_k127_237972_5 Cold shock protein domain - - - 0.000000000000215 79.0
YYD1_k127_237972_6 efflux transmembrane transporter activity - - - 0.0000000001173 66.0
YYD1_k127_2396093_0 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.000000000000000000000000000000000000000000000000000000006675 226.0
YYD1_k127_2396093_1 Domain of unknown function (DUF4115) - - - 0.000000000113 72.0
YYD1_k127_2396093_2 lactoylglutathione lyase activity - - - 0.00000003371 58.0
YYD1_k127_2396093_3 Tetratricopeptide repeat - - - 0.00004449 52.0
YYD1_k127_2401115_0 56kDa selenium binding protein (SBP56) K17285 - - 1.408e-227 712.0
YYD1_k127_2401115_1 Dehydrogenase K00114 - 1.1.2.8 4.995e-196 627.0
YYD1_k127_2401115_2 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 439.0
YYD1_k127_2401115_3 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002994 273.0
YYD1_k127_2401115_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000001083 224.0
YYD1_k127_2401115_5 Serine aminopeptidase, S33 K01055 - 3.1.1.24 0.00000000000000000000000000000000000006508 153.0
YYD1_k127_2401115_6 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.00000000000000000000000000001143 120.0
YYD1_k127_2401115_8 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000004508 110.0
YYD1_k127_2401115_9 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.00000000005635 65.0
YYD1_k127_2411130_0 Belongs to the peptidase M16 family K07263 - - 8.3e-319 1001.0
YYD1_k127_2411130_1 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 434.0
YYD1_k127_2411130_2 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000008037 221.0
YYD1_k127_2411130_3 Protein of unknown function, DUF - - - 0.000000000000000000000000000000000000000004037 159.0
YYD1_k127_2411130_4 - - - - 0.0000000000000000000000000000002338 130.0
YYD1_k127_2411130_6 - - - - 0.00001653 53.0
YYD1_k127_2416371_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000001754 182.0
YYD1_k127_2416371_1 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.000000000000000000000000004078 128.0
YYD1_k127_2419892_0 - - - - 0.0 1064.0
YYD1_k127_2419892_1 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004607 297.0
YYD1_k127_2419892_2 histone H2A K63-linked ubiquitination K01768,K03220,K10914 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000002598 211.0
YYD1_k127_2419892_3 Dioxygenase - - - 0.00000000000000000000000000000000000000000000000004955 188.0
YYD1_k127_2419892_4 Alcohol dehydrogenase GroES-like domain K00121 - 1.1.1.1,1.1.1.284 0.000000000000000000000000000000000000000000000002876 190.0
YYD1_k127_2419892_5 - - - - 0.000000000000000000000000000000001951 143.0
YYD1_k127_2419892_6 Alpha beta hydrolase - - - 0.000000000000000002481 93.0
YYD1_k127_2419892_7 Protein of unknown function (DUF418) K07148 - - 0.000003989 49.0
YYD1_k127_2425686_0 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000002859 168.0
YYD1_k127_2425686_1 Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000000000000000398 162.0
YYD1_k127_2425686_2 MgtC family K07507 - - 0.0000000000000000000000000001286 125.0
YYD1_k127_2425686_3 Belongs to the ABC transporter superfamily K10112 - - 0.0000000000000001102 83.0
YYD1_k127_2425686_4 sirohydrochlorin cobaltochelatase activity K03795 - 4.99.1.3 0.000000003995 61.0
YYD1_k127_2425686_5 Peptidase M56, BlaR1 - - - 0.0004405 51.0
YYD1_k127_2425686_6 - - - - 0.0009671 50.0
YYD1_k127_2427626_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 1.514e-298 931.0
YYD1_k127_2427626_1 Glycogen debranching enzyme N terminal - - - 1.598e-232 738.0
YYD1_k127_2427626_10 4'-phosphopantetheinyl transferase superfamily K06133 - - 0.0000000000000000000000000000000000000000003192 166.0
YYD1_k127_2427626_11 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000001393 176.0
YYD1_k127_2427626_12 epimerase K07071 - - 0.0000000000000000000000000007224 119.0
YYD1_k127_2427626_13 HEAT repeat - - - 0.00000000000001918 83.0
YYD1_k127_2427626_15 Carboxypeptidase regulatory-like domain - - - 0.000000099 62.0
YYD1_k127_2427626_2 synthase K06044 - 5.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 590.0
YYD1_k127_2427626_3 1,4-alpha-glucan branching enzyme activity K01236 - 3.2.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 561.0
YYD1_k127_2427626_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000285 282.0
YYD1_k127_2427626_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001069 262.0
YYD1_k127_2427626_6 Bacterial transcription activator, effector binding domain K13652 - - 0.000000000000000000000000000000000000000000000000000000000000000005244 236.0
YYD1_k127_2427626_7 ubiE/COQ5 methyltransferase family K00570 - 2.1.1.17,2.1.1.71 0.00000000000000000000000000000000000000000000000000001272 199.0
YYD1_k127_2427626_8 Lipocalin-like domain K03098 - - 0.0000000000000000000000000000000000000000000003247 175.0
YYD1_k127_2427626_9 Penicillinase repressor - - - 0.000000000000000000000000000000000000000000007397 166.0
YYD1_k127_2430556_0 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 376.0
YYD1_k127_2430556_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000004487 235.0
YYD1_k127_2430556_2 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000001342 203.0
YYD1_k127_2430556_3 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains K02584 - - 0.0000000000000000000000000000000000000000000004754 187.0
YYD1_k127_2430556_4 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000005644 155.0
YYD1_k127_2430556_5 BON domain K04065 - - 0.000000000000000000000000000134 124.0
YYD1_k127_2430556_6 PFAM Tetratricopeptide repeat - - - 0.000000003972 68.0
YYD1_k127_2430556_7 SnoaL-like domain - - - 0.00000001362 64.0
YYD1_k127_2437827_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006979 457.0
YYD1_k127_2437827_1 Protein of unknown function (DUF692) K09930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002949 288.0
YYD1_k127_2437827_15 - - - - 0.000000005474 68.0
YYD1_k127_2437827_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005207 271.0
YYD1_k127_2437827_3 PFAM Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005227 282.0
YYD1_k127_2437827_4 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000001383 252.0
YYD1_k127_2437827_6 tRNA cytidylyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000004791 196.0
YYD1_k127_2437827_7 SMART Signal transduction response regulator, receiver domain - - - 0.00000000000000000000000000000000000001217 159.0
YYD1_k127_2437827_8 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.00000000000000000000000000001864 127.0
YYD1_k127_2437827_9 - - - - 0.0000000000000000000001968 112.0
YYD1_k127_2458580_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 1.062e-271 874.0
YYD1_k127_2458580_1 peroxiredoxin activity - - - 2.399e-210 664.0
YYD1_k127_2458580_2 Tannase and feruloyl esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007584 475.0
YYD1_k127_2458580_3 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005585 347.0
YYD1_k127_2458580_4 electron transport chain K00347,K03614,K21163 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 319.0
YYD1_k127_2458580_5 Protein of unknown function (DUF1211) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003573 279.0
YYD1_k127_2458580_6 Twin-arginine translocation pathway signal protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007351 253.0
YYD1_k127_2458580_7 TonB-dependent receptor - - - 0.0000000000000000000000000001864 132.0
YYD1_k127_2458580_8 electron transport chain K00347,K03614 - 1.6.5.8 0.0000000000000000000000001887 108.0
YYD1_k127_2458580_9 Sodium:solute symporter family K14393 - - 0.0003133 43.0
YYD1_k127_2501298_0 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 463.0
YYD1_k127_2501298_1 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 370.0
YYD1_k127_2564390_0 response to copper ion K01187,K16915 - 3.2.1.20 0.000000000000000000000000000000000000000000001481 179.0
YYD1_k127_2564390_1 PFAM Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.000000000000000000000000000007626 134.0
YYD1_k127_2564390_2 - - - - 0.000000000000000000000000001837 125.0
YYD1_k127_2564390_3 - - - - 0.000000000000000000000004404 113.0
YYD1_k127_2580013_1 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000000003472 154.0
YYD1_k127_2580013_2 LysE type translocator - - - 0.000000000000000000000000000000001712 137.0
YYD1_k127_2580013_3 Signal peptidase (SPase) II K03101 - 3.4.23.36 0.00000000000000000000000000000004421 131.0
YYD1_k127_2580013_4 Ankyrin repeats (many copies) - - - 0.00000000000000000000000000175 123.0
YYD1_k127_2580013_5 - - - - 0.00000000000000000007506 96.0
YYD1_k127_2580013_6 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00002798 48.0
YYD1_k127_2580013_7 COG0500 SAM-dependent methyltransferases - - - 0.0001725 52.0
YYD1_k127_2612711_0 Short repeat of unknown function (DUF308) - - - 0.000000000000000000000000000000000000000000000003044 194.0
YYD1_k127_2612711_1 transcription factor binding K02584,K12146,K12266,K15836,K21009 GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0001150,GO:0001158,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035326,GO:0042802,GO:0043170,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2000142,GO:2000144,GO:2001141 - 0.0000000000000000000000000000000000000000000002161 179.0
YYD1_k127_2612711_2 Protein of unknown function (DUF1269) - - - 0.00000000000000000000000000000000000000000004254 173.0
YYD1_k127_2617794_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 593.0
YYD1_k127_2617794_1 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 441.0
YYD1_k127_2617794_10 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000004382 114.0
YYD1_k127_2617794_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 346.0
YYD1_k127_2617794_3 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008857 314.0
YYD1_k127_2617794_4 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000002222 184.0
YYD1_k127_2617794_5 Reverse transcriptase-like K03469 - 3.1.26.4 0.000000000000000000000000000000000000578 145.0
YYD1_k127_2617794_6 Involved in the tonB-independent uptake of proteins - GO:0005975,GO:0005996,GO:0006063,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0019586,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046397,GO:0071704,GO:0072329,GO:1901575 - 0.00000000000000000000000000000000005137 147.0
YYD1_k127_2617794_7 C4-type zinc ribbon domain K07164 - - 0.0000000000000000000000000000000004514 140.0
YYD1_k127_2617794_8 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000001301 127.0
YYD1_k127_2617794_9 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.0000000000000000000000000000003597 133.0
YYD1_k127_2635084_0 Aminomethyltransferase folate-binding domain K15066 - 2.1.1.341 1.503e-224 703.0
YYD1_k127_2635084_1 oligopeptide transporter, OPT family - - - 8.679e-196 644.0
YYD1_k127_2635084_10 Dimerisation domain of Zinc Transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000003131 233.0
YYD1_k127_2635084_11 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000000000000000003834 206.0
YYD1_k127_2635084_12 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000001136 213.0
YYD1_k127_2635084_13 transferase activity, transferring glycosyl groups K00713,K03280 - 2.4.1.56 0.00000000000000000000000000000000000000000000000000000001709 216.0
YYD1_k127_2635084_14 ubiE/COQ5 methyltransferase family K00570 - 2.1.1.17,2.1.1.71 0.00000000000000000000000000000000000000000000000000001135 197.0
YYD1_k127_2635084_15 - - - - 0.00000000000000000000000000000000000000000000000000001232 206.0
YYD1_k127_2635084_16 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000001333 198.0
YYD1_k127_2635084_17 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000001305 185.0
YYD1_k127_2635084_18 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00337,K00338 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000002689 174.0
YYD1_k127_2635084_19 Polysaccharide export protein K01991,K20988 - - 0.000000000000000000000000000000000000000009438 167.0
YYD1_k127_2635084_2 homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000472 600.0
YYD1_k127_2635084_20 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.00000000000000000000000000000000000001705 153.0
YYD1_k127_2635084_21 PFAM Auxin Efflux Carrier K07088 - - 0.0000000000000000000000000000000000001359 153.0
YYD1_k127_2635084_22 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000003625 148.0
YYD1_k127_2635084_23 lipopolysaccharide 3-alpha-galactosyltransferase activity - - - 0.000000000000000000000000000000001222 146.0
YYD1_k127_2635084_24 Glycosyl transferases group 1 - - - 0.00000000000000000000000000408 125.0
YYD1_k127_2635084_25 response regulator K02667 - - 0.000000000000000000000000008184 113.0
YYD1_k127_2635084_26 CarD-like/TRCF domain K07736 - - 0.00000000000000000000000001871 115.0
YYD1_k127_2635084_27 Polysaccharide biosynthesis protein - - - 0.0000000000000000000002334 112.0
YYD1_k127_2635084_28 Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway K15521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009987,GO:0010125,GO:0010126,GO:0016137,GO:0016138,GO:0016740,GO:0016757,GO:0016758,GO:0044237,GO:0044249,GO:0044272,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659 2.4.1.250 0.0000000000000000000178 104.0
YYD1_k127_2635084_29 oxidoreductase activity - - - 0.0000000000000000003194 103.0
YYD1_k127_2635084_3 TIGRFAM drug resistance transporter, Bcr CflA subfamily K07552 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007938 376.0
YYD1_k127_2635084_30 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000003399 81.0
YYD1_k127_2635084_31 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000001176 72.0
YYD1_k127_2635084_32 - - - - 0.0000002094 64.0
YYD1_k127_2635084_33 Putative beta-barrel porin 2 - - - 0.000003036 59.0
YYD1_k127_2635084_34 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.0003011 52.0
YYD1_k127_2635084_4 Major facilitator Superfamily K08195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003528 367.0
YYD1_k127_2635084_5 Histidine kinase internal region K02478 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 340.0
YYD1_k127_2635084_6 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 330.0
YYD1_k127_2635084_7 Two component transcriptional regulator, LytTR family K02477,K07705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007731 268.0
YYD1_k127_2635084_8 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001381 254.0
YYD1_k127_2635084_9 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001653 239.0
YYD1_k127_2636235_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1149.0
YYD1_k127_2636235_1 Thiamine pyrophosphate protein TPP binding domain protein K01652 - 2.2.1.6 1.639e-278 866.0
YYD1_k127_2636235_10 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000303 249.0
YYD1_k127_2636235_11 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000003593 214.0
YYD1_k127_2636235_12 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000004914 211.0
YYD1_k127_2636235_13 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000672 211.0
YYD1_k127_2636235_14 Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000001919 202.0
YYD1_k127_2636235_15 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000001857 188.0
YYD1_k127_2636235_16 Conserved hypothetical protein 95 - - - 0.0000000000000000000000000000000000005379 148.0
YYD1_k127_2636235_17 CoA-binding protein K06929 - - 0.000000000000000000000000000000000009286 140.0
YYD1_k127_2636235_18 RNA recognition motif - - - 0.00000000000000000000000000008536 119.0
YYD1_k127_2636235_19 Zincin-like metallopeptidase K00930 - 2.7.2.8 0.00000000000000000000000002963 117.0
YYD1_k127_2636235_2 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 1.976e-264 824.0
YYD1_k127_2636235_20 Periplasmic or secreted lipoprotein - - - 0.0000000000000000001118 100.0
YYD1_k127_2636235_21 PFAM Iron sulphur-containing domain, CDGSH-type - - - 0.0000000000000005323 79.0
YYD1_k127_2636235_3 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 9.768e-223 707.0
YYD1_k127_2636235_4 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 1.435e-196 634.0
YYD1_k127_2636235_5 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 579.0
YYD1_k127_2636235_6 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 491.0
YYD1_k127_2636235_7 FAD linked oxidase K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 440.0
YYD1_k127_2636235_8 Aminotransferase K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006965 339.0
YYD1_k127_2636235_9 DnaJ molecular chaperone homology domain K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 301.0
YYD1_k127_2636525_0 PFAM type II secretion system protein E K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 548.0
YYD1_k127_2636525_1 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 455.0
YYD1_k127_2636525_10 - - - - 0.000000000000000000000000000000000000000000000000124 190.0
YYD1_k127_2636525_11 flp pilus assembly protein CpaB K02279 - - 0.00000000000000000000000000000000000000000000884 173.0
YYD1_k127_2636525_12 AAA domain K02282 - - 0.0000000000000000000000000000000000000000007185 171.0
YYD1_k127_2636525_13 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000000000000000000000000000001831 156.0
YYD1_k127_2636525_14 PFAM Peptidase A24A, prepilin type IV K02278 - 3.4.23.43 0.000000000000000001102 93.0
YYD1_k127_2636525_15 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000001692 92.0
YYD1_k127_2636525_16 Glycosyltransferase family 87 - - - 0.00000000004421 76.0
YYD1_k127_2636525_17 TadE-like protein - - - 0.00000002131 62.0
YYD1_k127_2636525_18 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000003871 63.0
YYD1_k127_2636525_19 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.000003286 52.0
YYD1_k127_2636525_2 ATPase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 407.0
YYD1_k127_2636525_20 Flp Fap pilin component K02651 - - 0.0000292 51.0
YYD1_k127_2636525_21 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0007861 52.0
YYD1_k127_2636525_3 Belongs to the GSP D family K02280 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004048 321.0
YYD1_k127_2636525_4 TIGRFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000783 264.0
YYD1_k127_2636525_5 type II secretion system K12511 - - 0.00000000000000000000000000000000000000000000000000000000000000006898 233.0
YYD1_k127_2636525_6 type II secretion system protein K12510 - - 0.00000000000000000000000000000000000000000000000000000000001821 219.0
YYD1_k127_2636525_7 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000001419 211.0
YYD1_k127_2636525_8 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008677,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.1.1.169 0.0000000000000000000000000000000000000000000000000002968 203.0
YYD1_k127_2636525_9 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000001169 191.0
YYD1_k127_2639970_0 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.000000000000000000000000000000000000000000000000000000000000000005627 240.0
YYD1_k127_2639970_1 Deoxyhypusine synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000001481 227.0
YYD1_k127_2639970_2 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000006821 186.0
YYD1_k127_2639970_3 COG0720 6-pyruvoyl-tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000002847 163.0
YYD1_k127_2639970_4 PFAM Haloacid dehalogenase domain protein hydrolase K01091 - 3.1.3.18 0.0000000000000000000000000000000002555 141.0
YYD1_k127_2639970_5 Di-haem oxidoreductase, putative peroxidase - - - 0.00000000000000000000000006286 111.0
YYD1_k127_2639970_6 Putative adhesin - - - 0.0001653 53.0
YYD1_k127_2655599_0 ABC transporter K06158 GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0050896 - 3.221e-280 867.0
YYD1_k127_2655599_1 Ankyrin repeats (many copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 579.0
YYD1_k127_2655599_2 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005639 413.0
YYD1_k127_2660361_0 Heavy metal translocating P-type atpase K01534 - 3.6.3.3,3.6.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 573.0
YYD1_k127_2660361_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09697 - 3.6.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 334.0
YYD1_k127_2660361_10 - K05826 - - 0.00005907 49.0
YYD1_k127_2660361_2 ABC-type uncharacterized transport system K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000491 287.0
YYD1_k127_2660361_3 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003301 246.0
YYD1_k127_2660361_4 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000003348 189.0
YYD1_k127_2660361_5 PFAM asparagine synthase K06864 - - 0.000000000000000000000000000000000000000001694 163.0
YYD1_k127_2660361_6 PFAM Bacterial regulatory protein, arsR family K21903 - - 0.0000000000000000000000000002467 116.0
YYD1_k127_2660361_7 Domain of unknown function (DUF4340) - - - 0.000000000000000002 98.0
YYD1_k127_2660361_8 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.0000000009955 68.0
YYD1_k127_2660361_9 Heat shock 70 kDa protein K04043 - - 0.000005335 57.0
YYD1_k127_2675604_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 1.786e-199 638.0
YYD1_k127_2675604_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01539 - 3.6.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003705 547.0
YYD1_k127_2675604_10 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.0000000000000000000003473 102.0
YYD1_k127_2675604_2 AAA domain K07028 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 499.0
YYD1_k127_2675604_3 ABC1 family K03688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 451.0
YYD1_k127_2675604_4 Domain present in PSD-95, Dlg, and ZO-1/2. K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000002895 188.0
YYD1_k127_2675604_5 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000003743 136.0
YYD1_k127_2675604_6 Belongs to the universal stress protein A family - - - 0.00000000000000000000000000000001612 139.0
YYD1_k127_2675604_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000255 132.0
YYD1_k127_2675604_8 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000001135 138.0
YYD1_k127_2675604_9 Belongs to the universal stress protein A family - - - 0.00000000000000000000000000007003 128.0
YYD1_k127_2704976_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 347.0
YYD1_k127_2704976_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000002668 202.0
YYD1_k127_2704976_2 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000001545 185.0
YYD1_k127_2704976_3 RNA signal recognition particle 4.5S RNA - - - 0.000000000000000000000000000000000000000000007654 165.0
YYD1_k127_2704976_4 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000000009982 162.0
YYD1_k127_2704976_5 Tellurite resistance protein TerB - - - 0.0000000000000000000000000000000000001709 151.0
YYD1_k127_2704976_6 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000003712 156.0
YYD1_k127_2704976_7 SnoaL-like domain - - - 0.0000000000000000000000000000000000009578 141.0
YYD1_k127_2704976_8 response regulator K07689 - - 0.00000000000000000000003807 105.0
YYD1_k127_2704976_9 PFAM von Willebrand factor type A K07114,K12511 - - 0.000000000000000002085 97.0
YYD1_k127_2725177_0 transport - - - 1.2e-293 943.0
YYD1_k127_2725177_1 IclR helix-turn-helix domain K10439 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 436.0
YYD1_k127_2725177_2 alpha-L-rhamnosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006826 376.0
YYD1_k127_2725177_3 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000007719 162.0
YYD1_k127_2725177_4 - - - - 0.000000000002916 71.0
YYD1_k127_2725177_5 - - - - 0.00004849 48.0
YYD1_k127_2727127_0 N-acylneuraminate-9-phosphate synthase activity K01654,K18430 GO:0003674,GO:0003824,GO:0005975,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016740,GO:0016765,GO:0044238,GO:0071704,GO:1901576 2.5.1.101,2.5.1.56 0.000000000000000000000000000000000000000000000000000000000001667 222.0
YYD1_k127_2727127_1 CarboxypepD_reg-like domain - - - 0.00000000000000000000000001462 128.0
YYD1_k127_2727127_2 Spore coat polysaccharide biosynthesis protein - - - 0.0000009812 60.0
YYD1_k127_2727127_3 glycolate biosynthetic process K07025 - - 0.00009894 49.0
YYD1_k127_2750764_0 transferase activity, transferring glycosyl groups - - - 3.199e-241 783.0
YYD1_k127_2750764_1 STELLO glycosyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004546 407.0
YYD1_k127_2750764_2 Glycosyl transferase, family 2 K16648 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 298.0
YYD1_k127_2750764_3 - - - - 0.000004406 51.0
YYD1_k127_2780646_0 Serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000000000001982 225.0
YYD1_k127_2780646_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000498 65.0
YYD1_k127_2788208_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000073 336.0
YYD1_k127_2788208_1 Histidine kinase K07683 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000006587 283.0
YYD1_k127_2788208_2 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000006168 257.0
YYD1_k127_2788208_3 HWE histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000001414 252.0
YYD1_k127_2788208_4 response regulator - - - 0.0000000000000000000000000000000000000000000000000005595 190.0
YYD1_k127_2788208_5 Tetratricopeptide repeat - - - 0.000002702 58.0
YYD1_k127_2788208_6 Aminotransferase K03430 - 2.6.1.37 0.0003504 43.0
YYD1_k127_2794154_0 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 1.915e-230 727.0
YYD1_k127_2794154_1 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000002357 251.0
YYD1_k127_2794154_2 Protein of Unknown function (DUF2784) - - - 0.0000000000000000000000000000000000000000002083 162.0
YYD1_k127_2794154_3 DinB family - - - 0.0000000000000000000000000000000000009402 145.0
YYD1_k127_2794154_4 ABC transporter K06020 - 3.6.3.25 0.000000000000000000000000000000000009605 136.0
YYD1_k127_2794154_5 oxidation-reduction process - - - 0.00000000000000000000000000000000001858 141.0
YYD1_k127_2799746_0 PFAM Carbamoyl-phosphate synthase L chain K01955 GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.5.5 0.0 1202.0
YYD1_k127_2799746_1 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000925 508.0
YYD1_k127_2799746_2 Belongs to the CarA family K01956 GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 449.0
YYD1_k127_2799746_3 Bacillithiol biosynthesis BshC K22136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 314.0
YYD1_k127_28142_0 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 382.0
YYD1_k127_28142_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003023 277.0
YYD1_k127_28142_2 Pyrrolo-quinoline quinone K00114 - 1.1.2.8 0.00000000000000000000000000000000000000000000000000000000000000313 225.0
YYD1_k127_28142_3 Haem-degrading K11477 - - 0.00000000709 64.0
YYD1_k127_2829230_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 2.121e-222 703.0
YYD1_k127_2829230_1 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 536.0
YYD1_k127_2829230_2 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008888 291.0
YYD1_k127_2829230_3 COGs COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000909 278.0
YYD1_k127_2829230_4 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001375 261.0
YYD1_k127_2829230_5 Yip1 domain - - - 0.000001168 59.0
YYD1_k127_2841950_0 SRP54-type protein, GTPase domain K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 474.0
YYD1_k127_2841950_1 tRNA (Guanine-1)-methyltransferase K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002214 283.0
YYD1_k127_2841950_2 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000006671 142.0
YYD1_k127_2841950_3 - - - - 0.0000000000000000000000000000005835 135.0
YYD1_k127_2841950_4 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 GO:0008150,GO:0040007 - 0.00000000000000000000000001029 119.0
YYD1_k127_2841950_5 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000079 87.0
YYD1_k127_2841950_6 KH domain - - - 0.000000000001793 75.0
YYD1_k127_2844422_0 Belongs to the IlvD Edd family K01687,K13875,K22186,K22216 - 4.2.1.25,4.2.1.82,4.2.1.9 9.669e-206 665.0
YYD1_k127_2844422_1 Protein of unknown function (DUF521) K09123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 531.0
YYD1_k127_2844422_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 508.0
YYD1_k127_2844422_3 Protein of unknown function DUF126 K09128 - - 0.000000000000000000000000000000000000000000000000000004915 196.0
YYD1_k127_285103_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006623 495.0
YYD1_k127_285103_1 Tryptophanyl-tRNA synthetase K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 358.0
YYD1_k127_285103_2 Peptidase family M50 K06402 - - 0.0000000000000000000000000000000000000000000000001478 183.0
YYD1_k127_285103_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000001607 154.0
YYD1_k127_285103_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000004202 59.0
YYD1_k127_2878491_0 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 597.0
YYD1_k127_2878491_1 Tannase and feruloyl esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000628 454.0
YYD1_k127_2878491_10 short-chain dehydrogenase - - - 0.0000000000000000000000000000000000004252 143.0
YYD1_k127_2878491_11 - - - - 0.00000000000000000000000000000000002749 136.0
YYD1_k127_2878491_12 sequence-specific DNA binding K07726 - - 0.00000000000000000000000000000576 125.0
YYD1_k127_2878491_13 Domain of unknown function (DUF1905) - - - 0.000000000000000000000000001859 117.0
YYD1_k127_2878491_14 adenosylhomocysteine nucleosidase activity K01239,K01243,K03716 - 3.2.2.1,3.2.2.9,4.1.99.14 0.00000000000000000000000007625 113.0
YYD1_k127_2878491_15 Alpha/beta hydrolase family - - - 0.0000000000000000000000001914 116.0
YYD1_k127_2878491_16 - - - - 0.0000000000000001467 84.0
YYD1_k127_2878491_17 PFAM Pentapeptide repeats (8 copies) - - - 0.000000000000007984 83.0
YYD1_k127_2878491_18 - - - - 0.0000000000002074 80.0
YYD1_k127_2878491_2 protein-(glutamine-N5) methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 315.0
YYD1_k127_2878491_3 Methylene-tetrahydrofolate reductase C terminal K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000006333 260.0
YYD1_k127_2878491_4 HAD-hyrolase-like K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000009997 223.0
YYD1_k127_2878491_5 Domain of unknown function (DUF4265) - - - 0.0000000000000000000000000000000000000000000000000000000000005455 214.0
YYD1_k127_2878491_6 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000009498 197.0
YYD1_k127_2878491_7 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000001764 199.0
YYD1_k127_2878491_8 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768,K12132 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016021,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0031224,GO:0031226,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.11.1,5.2.1.8 0.00000000000000000000000000000000000000000000005592 177.0
YYD1_k127_2878491_9 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000006955 152.0
YYD1_k127_2891832_0 AcrB/AcrD/AcrF family - - - 1.054e-231 745.0
YYD1_k127_2891832_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 409.0
YYD1_k127_2891832_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005859 371.0
YYD1_k127_2891832_3 - - - - 0.000000000000000000000000000000000000000000008542 168.0
YYD1_k127_291936_0 - - - - 0.000000000000000000000000000000000000000000000000000000000004025 215.0
YYD1_k127_291936_1 lipoprotein transporter activity K02003 - - 0.0000000000000000000000000000000000000000000000000000000002065 219.0
YYD1_k127_291936_2 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000898 151.0
YYD1_k127_291936_3 - - - - 0.00000000000000000001771 105.0
YYD1_k127_291936_4 lipoprotein localization to outer membrane K09808 - - 0.000000000000000337 83.0
YYD1_k127_2922452_0 xanthine dehydrogenase activity - - - 0.0 1130.0
YYD1_k127_2922452_1 Spermine/spermidine synthase domain K00797 - 2.5.1.16 7.64e-207 653.0
YYD1_k127_2922452_2 Domain of unknown function (DUF4178) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009505 421.0
YYD1_k127_2922452_3 2Fe-2S -binding domain protein K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000009689 258.0
YYD1_k127_2922452_4 S-adenosylmethionine decarboxylase K01611 - 4.1.1.50 0.00000000000000000000000000000008477 128.0
YYD1_k127_2922452_5 Domain of Unknown Function (DUF350) - - - 0.00000000000001498 77.0
YYD1_k127_2922452_6 - - - - 0.0000000000000326 74.0
YYD1_k127_2924131_0 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000794 464.0
YYD1_k127_2924131_1 Protein of unknown function (DUF3500) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006272 328.0
YYD1_k127_2924131_10 bacterial-type flagellum-dependent cell motility - - - 0.0003042 51.0
YYD1_k127_2924131_2 nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005315 261.0
YYD1_k127_2924131_3 Belongs to the TPP enzyme family K01576,K01652 - 2.2.1.6,4.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000001373 244.0
YYD1_k127_2924131_4 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000004175 214.0
YYD1_k127_2924131_5 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000002409 192.0
YYD1_k127_2924131_6 Domain of unknown function (DUF4159) - - - 0.000000000000000000000000000000000000000000000002839 183.0
YYD1_k127_2924131_7 - - - - 0.0000000000000000000000000000000000000003058 161.0
YYD1_k127_2924131_8 META domain - - - 0.000000002817 64.0
YYD1_k127_2924131_9 - - - - 0.000000009638 66.0
YYD1_k127_2943598_0 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 403.0
YYD1_k127_2943598_1 belongs to the lyase 1 family. Argininosuccinate lyase subfamily K01755,K14681 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 395.0
YYD1_k127_2943598_10 - - - - 0.0000001367 62.0
YYD1_k127_2943598_2 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004974 292.0
YYD1_k127_2943598_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 GO:0003674,GO:0003824,GO:0003942,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002952 281.0
YYD1_k127_2943598_4 Sigma-54 factor interaction domain-containing protein K02481,K07712,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002647 275.0
YYD1_k127_2943598_5 peptidase S8 and S53, subtilisin, kexin, sedolisin K17734 - - 0.000000000000000000000000000000000000000000000000000000000000000003532 252.0
YYD1_k127_2943598_6 Deoxyhypusine synthase - - - 0.0000000000000000000000000000000000000000000000000000003495 199.0
YYD1_k127_2943598_7 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.00000000000000000000000000000000000003713 160.0
YYD1_k127_2943598_8 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000003965 139.0
YYD1_k127_2943598_9 Regulates arginine biosynthesis genes K03402 - - 0.000000000000000000000001898 110.0
YYD1_k127_294933_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 527.0
YYD1_k127_294933_1 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K07303 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 406.0
YYD1_k127_294933_10 - - - - 0.0000000000000000002959 99.0
YYD1_k127_294933_11 Aminotransferase K14267 - 2.6.1.17 0.0000000000000000009363 87.0
YYD1_k127_294933_12 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0000000000006031 71.0
YYD1_k127_294933_14 amidase activity K01426 - 3.5.1.4 0.00000000004759 74.0
YYD1_k127_294933_2 Mo-co oxidoreductase dimerisation domain K17225 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 372.0
YYD1_k127_294933_3 HpcH/HpaI aldolase/citrate lyase family K01630,K02510 - 4.1.2.20,4.1.2.52 0.00000000000000000000000000000000000000000000000000000000000003506 225.0
YYD1_k127_294933_4 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000005939 226.0
YYD1_k127_294933_5 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000001642 215.0
YYD1_k127_294933_6 - - - - 0.000000000000000000000000000000000000000000000000000007071 201.0
YYD1_k127_294933_7 cytochrome K08738 - - 0.000000000000000000000000000000000000006161 153.0
YYD1_k127_294933_8 Paraquat-inducible protein A - - - 0.00000000000000000000002517 117.0
YYD1_k127_294933_9 negative regulation of transcription, DNA-templated - - - 0.0000000000000000001047 93.0
YYD1_k127_2950367_0 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 317.0
YYD1_k127_2950367_1 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000005475 252.0
YYD1_k127_2950367_2 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.0000000000000000000000000000000000000000000000000000005495 195.0
YYD1_k127_2950367_3 PFAM PEGA domain - - - 0.00001652 57.0
YYD1_k127_2952144_0 PQQ-like domain K17760 - 1.1.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 513.0
YYD1_k127_2952144_1 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K17763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 430.0
YYD1_k127_2952144_10 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000000011 181.0
YYD1_k127_2952144_11 Phospholipid methyltransferase - - - 0.00000000000000000000000000000000000000000000002197 182.0
YYD1_k127_2952144_12 Histidine kinase-like ATPases K17752 - 2.7.11.1 0.0000000000000000000000000000000000000000000001914 173.0
YYD1_k127_2952144_13 PFAM metal-dependent phosphohydrolase HD sub domain - - - 0.000000000000000000000000000000000000000000009307 181.0
YYD1_k127_2952144_14 Stage II sporulation protein E K05518 - 3.1.3.3 0.00000000000000000000000000000000000000000002517 168.0
YYD1_k127_2952144_15 PFAM Sulfate transporter antisigma-factor antagonist STAS K17762 - - 0.00000000000000000000000000000000000000000002835 165.0
YYD1_k127_2952144_16 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000000000000003844 166.0
YYD1_k127_2952144_17 - K02172 - - 0.00000000000000000000000000000000001796 147.0
YYD1_k127_2952144_18 protein histidine kinase activity - - - 0.00000000000000000000000000000000004951 145.0
YYD1_k127_2952144_2 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 398.0
YYD1_k127_2952144_20 SnoaL-like domain - - - 0.00000000000000000000000001586 117.0
YYD1_k127_2952144_22 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000002729 74.0
YYD1_k127_2952144_23 - - - - 0.0000005956 57.0
YYD1_k127_2952144_3 Glucose / Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 317.0
YYD1_k127_2952144_4 methyltransferase K03149,K15256 GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0042221,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 289.0
YYD1_k127_2952144_5 Histidine kinase-like ATPase domain K01338,K04757,K06379,K08282,K17752 - 2.7.11.1,3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000006233 227.0
YYD1_k127_2952144_6 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000001798 228.0
YYD1_k127_2952144_7 Two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.00000000000000000000000000000000000000000000000000000000001868 218.0
YYD1_k127_2952144_8 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000006322 196.0
YYD1_k127_2952144_9 Conserved hypothetical protein (DUF2461) - - - 0.00000000000000000000000000000000000000000000000001037 187.0
YYD1_k127_2964542_0 Sulfite reductase K00366,K00381,K00392 - 1.7.7.1,1.8.1.2,1.8.7.1 1.729e-194 623.0
YYD1_k127_2964542_1 Peptidase family M3 K01392 - 3.4.24.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 546.0
YYD1_k127_2964542_2 protein kinase activity K06915 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 518.0
YYD1_k127_2964542_3 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003294 503.0
YYD1_k127_2964542_4 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 364.0
YYD1_k127_2964542_5 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007124 296.0
YYD1_k127_2964542_6 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000002427 252.0
YYD1_k127_2964542_7 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000004238 245.0
YYD1_k127_2964542_8 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.00000000000000000000000000000000000000000000000000000009118 201.0
YYD1_k127_2974029_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004178 281.0
YYD1_k127_2974029_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000003163 201.0
YYD1_k127_2974029_2 Rhodanese-like domain - - - 0.00000000000000000000000000000000001375 138.0
YYD1_k127_2974029_3 Protein of unknown function (DUF2934) - - - 0.00002086 53.0
YYD1_k127_2974029_4 two component, sigma54 specific, transcriptional regulator K02481 - - 0.0001125 48.0
YYD1_k127_2984651_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 2.86e-198 640.0
YYD1_k127_2984651_1 Aminotransferase class-III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004017 564.0
YYD1_k127_2984651_10 imidazolonepropionase activity - - - 0.000005509 50.0
YYD1_k127_2984651_11 Cupin 2, conserved barrel domain protein - - - 0.00003967 55.0
YYD1_k127_2984651_2 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001011 258.0
YYD1_k127_2984651_3 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004513 262.0
YYD1_k127_2984651_4 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000003299 250.0
YYD1_k127_2984651_5 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000000000000000000000000000000000002636 196.0
YYD1_k127_2984651_6 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000003317 176.0
YYD1_k127_2984651_7 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000002471 123.0
YYD1_k127_2984651_9 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000001812 74.0
YYD1_k127_2992821_0 Involved in the tonB-independent uptake of proteins K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 516.0
YYD1_k127_2992821_1 receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 424.0
YYD1_k127_2992821_2 Belongs to the glycosyl hydrolase 18 family K01183 - 3.2.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 291.0
YYD1_k127_2992821_3 - - - - 0.000000000000000000000000000000000000000000001572 172.0
YYD1_k127_2992821_4 - - - - 0.0007093 49.0
YYD1_k127_3021689_0 DNA topological change K03168 - 5.99.1.2 4.893e-238 760.0
YYD1_k127_3021689_1 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004725 452.0
YYD1_k127_3021689_2 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 319.0
YYD1_k127_3021689_3 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005451 304.0
YYD1_k127_3027261_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005537 482.0
YYD1_k127_3027261_1 Belongs to the ClpA ClpB family K03696 GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004172 468.0
YYD1_k127_3027261_10 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744,K09774,K22110 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0006810,GO:0008150,GO:0008643,GO:0008645,GO:0009279,GO:0015267,GO:0015288,GO:0015749,GO:0015750,GO:0015751,GO:0015757,GO:0016020,GO:0019867,GO:0022803,GO:0022829,GO:0022857,GO:0030312,GO:0030313,GO:0031975,GO:0034219,GO:0044462,GO:0044464,GO:0046323,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:1904659 - 0.000000000000000000000000000000000000000000000000000001298 218.0
YYD1_k127_3027261_11 sodium ABC transporter, permease K09696 - - 0.00000000000000000001068 101.0
YYD1_k127_3027261_12 peptidyl-tyrosine sulfation - - - 0.000000000000000006241 95.0
YYD1_k127_3027261_2 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 395.0
YYD1_k127_3027261_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005057 346.0
YYD1_k127_3027261_4 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003791 280.0
YYD1_k127_3027261_5 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000002514 275.0
YYD1_k127_3027261_6 ABC transporter K09697 - 3.6.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000007666 248.0
YYD1_k127_3027261_7 Polysaccharide biosynthesis protein K15856 - 1.1.1.281 0.00000000000000000000000000000000000000000000000000000000000000000001494 243.0
YYD1_k127_3027261_8 Deoxynucleoside kinase K15518 - 2.7.1.113 0.00000000000000000000000000000000000000000000000000000000000000001781 230.0
YYD1_k127_3027261_9 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000003673 230.0
YYD1_k127_3030955_0 metal-dependent hydrolase with the TIM-barrel fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 340.0
YYD1_k127_3030955_1 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004165 296.0
YYD1_k127_3030955_2 glucose sorbosone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004851 294.0
YYD1_k127_3030955_3 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000001168 209.0
YYD1_k127_3030955_4 Ricin-type beta-trefoil - - - 0.00000000000000000000000000000000000000005769 158.0
YYD1_k127_3030955_5 - - - - 0.0000000000000000000000006366 108.0
YYD1_k127_3030955_6 - - - - 0.00000000000000000000004097 112.0
YYD1_k127_3030955_7 ABC transporter K02051 - - 0.0000000003247 72.0
YYD1_k127_3030955_9 Domain of unknown function (DU1801) - - - 0.0000002142 63.0
YYD1_k127_3036452_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 321.0
YYD1_k127_3036452_1 Metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000005337 151.0
YYD1_k127_3036452_2 - - - - 0.000000000000000000000000000000001553 135.0
YYD1_k127_3036452_3 4Fe-4S binding domain - - - 0.000000000000000000000000004214 123.0
YYD1_k127_3036452_4 PFAM YeeE YedE family (DUF395) K07112 - - 0.0000000000000000000002696 109.0
YYD1_k127_3036452_5 PFAM YeeE YedE family (DUF395) K07112 - - 0.00000000000000000001559 101.0
YYD1_k127_3036452_6 Regulator of nitric oxide reductase transcription K19339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000001072 70.0
YYD1_k127_3036452_7 - - - - 0.000007489 54.0
YYD1_k127_3048034_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003462 476.0
YYD1_k127_3048034_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 456.0
YYD1_k127_3048034_10 PFAM glycosyl transferase family 9 K02841 - - 0.000000000000000000000000000000000000000000000001106 187.0
YYD1_k127_3048034_11 TIGRFAM D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000001224 162.0
YYD1_k127_3048034_13 Pfam Transposase IS66 - - - 0.00000000000000007723 85.0
YYD1_k127_3048034_14 Preprotein translocase SecG subunit K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.0000000000002631 74.0
YYD1_k127_3048034_2 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007665 323.0
YYD1_k127_3048034_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001383 284.0
YYD1_k127_3048034_4 TIGRFAM rfaE bifunctional protein, domain I K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000003295 258.0
YYD1_k127_3048034_5 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000001048 236.0
YYD1_k127_3048034_6 D,D-heptose 1,7-bisphosphate phosphatase K02841,K02843,K02849,K03271,K03272,K03273 - 2.7.1.167,2.7.7.70,3.1.3.82,3.1.3.83,5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000005355 229.0
YYD1_k127_3048034_7 Lipid A biosynthesis K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000004729 194.0
YYD1_k127_3048034_8 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000008252 192.0
YYD1_k127_3048034_9 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000000000204 181.0
YYD1_k127_3048396_0 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007742 296.0
YYD1_k127_3048396_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000002871 170.0
YYD1_k127_3048396_2 pilus organization - - - 0.00000000000000000000000000001589 132.0
YYD1_k127_3048396_3 Transcriptional regulatory protein, C terminal - - - 0.000000000000000001304 100.0
YYD1_k127_3048396_4 COG0457 FOG TPR repeat - - - 0.0009634 51.0
YYD1_k127_3074407_0 Belongs to the TPP enzyme family K01576 - 4.1.1.7 4.823e-204 647.0
YYD1_k127_3074407_1 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 571.0
YYD1_k127_3074407_10 - - - - 0.0002826 53.0
YYD1_k127_3074407_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003968 512.0
YYD1_k127_3074407_3 PQQ-like domain K05889 - 1.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006961 430.0
YYD1_k127_3074407_4 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 321.0
YYD1_k127_3074407_5 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 304.0
YYD1_k127_3074407_6 - - - - 0.00000000000000000000000000000000000000000009928 169.0
YYD1_k127_3074407_7 Domain of unknown function (DUF2383) - - - 0.0000000000000000000000000008058 117.0
YYD1_k127_3074407_8 - - - - 0.00000000000000000000008216 111.0
YYD1_k127_3074407_9 - - - - 0.00001368 55.0
YYD1_k127_3084244_0 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008584 379.0
YYD1_k127_3084244_1 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 318.0
YYD1_k127_3084244_2 Belongs to the HpcH HpaI aldolase family K00979,K01630,K02510 - 2.7.7.38,4.1.2.20,4.1.2.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003683 275.0
YYD1_k127_3084244_3 PFAM Aminotransferase, class I K10907 - - 0.00000000000000000000000000000000000000000000000000001056 203.0
YYD1_k127_3084244_4 - - - - 0.0000000000000000000000000000000000000000000000000006656 198.0
YYD1_k127_3084244_5 Psort location CytoplasmicMembrane, score K19225 - 3.4.21.105 0.000000000000000005611 97.0
YYD1_k127_3093550_0 Belongs to the ClpA ClpB family K03696 GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 617.0
YYD1_k127_3093550_1 TIGRFAM outer membrane protein assembly complex, YaeT protein K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005856 349.0
YYD1_k127_3093550_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000003962 265.0
YYD1_k127_3093550_3 Protein of unknown function (DUF1009) K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006714 274.0
YYD1_k127_3093550_4 Belongs to the skp family K06142 - - 0.00000165 59.0
YYD1_k127_3093981_0 Peptidase, M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000004573 209.0
YYD1_k127_3093981_1 PFAM DoxX family protein K15977 - - 0.0000000000000000000000000000000237 137.0
YYD1_k127_3093981_3 - - - - 0.0000000000000002616 90.0
YYD1_k127_3093981_4 - - - - 0.000000009692 64.0
YYD1_k127_3093981_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000405 53.0
YYD1_k127_31002_0 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 478.0
YYD1_k127_31002_1 - - - - 0.000000000000000000000002197 108.0
YYD1_k127_31002_3 Alpha/beta hydrolase family - - - 0.000000000002419 70.0
YYD1_k127_3130999_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1215.0
YYD1_k127_3130999_1 Outer membrane protein, OMP85 family K07277 - - 0.000000001461 67.0
YYD1_k127_3131261_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 447.0
YYD1_k127_3131261_1 Belongs to the N(4) N(6)-methyltransferase family K00571,K00590 - 2.1.1.113,2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 342.0
YYD1_k127_3131261_2 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000001064 154.0
YYD1_k127_3131261_3 Belongs to the peptidase S11 family K07262 - - 0.0000000000000000000000000000000000008989 154.0
YYD1_k127_3131261_4 Necessary for formate dehydrogenase activity K02380 - - 0.0000000000000000001144 102.0
YYD1_k127_3131261_5 oxidoreductase activity - - - 0.000000000000001018 90.0
YYD1_k127_3131261_6 - - - - 0.0000000005209 61.0
YYD1_k127_3131261_7 Belongs to the thioredoxin family K03671 - - 0.00005036 45.0
YYD1_k127_3133677_0 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005675 462.0
YYD1_k127_3133677_1 polysaccharide catabolic process K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006029 428.0
YYD1_k127_3133677_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 307.0
YYD1_k127_3133677_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007071 303.0
YYD1_k127_3133677_4 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004302 256.0
YYD1_k127_3133677_5 IstB-like ATP binding protein K02315 - - 0.0000000000000000000000000000000000000000000000000004507 194.0
YYD1_k127_3133677_6 Transcriptional regulator, MerR family K13640 GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000002116 153.0
YYD1_k127_3133677_7 - - - - 0.0000004926 57.0
YYD1_k127_3139386_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 422.0
YYD1_k127_3139386_1 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 392.0
YYD1_k127_3139386_11 Glycosyl hydrolases family 43 - - - 0.000000009947 58.0
YYD1_k127_3139386_12 oxidoreductase activity K00337,K03333,K04771,K07114 - 1.1.3.6,1.6.5.3,3.4.21.107 0.00007138 47.0
YYD1_k127_3139386_13 Multicopper oxidase K00368,K07233,K22349 - 1.16.3.3,1.7.2.1 0.00009733 46.0
YYD1_k127_3139386_2 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 298.0
YYD1_k127_3139386_3 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001141 311.0
YYD1_k127_3139386_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007785 253.0
YYD1_k127_3139386_5 Protein of unknown function (DUF3014) - - - 0.00000000000000000000000000000000102 141.0
YYD1_k127_3139386_6 Belongs to the glycosyl hydrolase 43 family - - - 0.00000000000000000000000000000002205 147.0
YYD1_k127_3139386_7 - - - - 0.00000000000000000000000000000005356 139.0
YYD1_k127_3139386_8 Domain of unknown function (DUF4142) K08995 - - 0.00000000000000000003701 102.0
YYD1_k127_3139386_9 Cold shock protein domain - - - 0.0000000000000002184 83.0
YYD1_k127_315628_0 cellulose binding - - - 0.0 1080.0
YYD1_k127_315628_1 homolog of phage Mu protein gp47 - - - 9.356e-308 970.0
YYD1_k127_315628_10 domain, Protein K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000001025 180.0
YYD1_k127_315628_11 - - - - 0.00000000000000000000000000000000000002331 145.0
YYD1_k127_315628_12 Gene 25-like lysozyme K06903 - - 0.000000000000000000000000000000000001098 141.0
YYD1_k127_315628_13 - - - - 0.000000000000000000000000000000000008338 143.0
YYD1_k127_315628_14 histone H2A K63-linked ubiquitination - - - 0.00000000000000000000000000000168 128.0
YYD1_k127_315628_15 LysM domain - - - 0.0000000000000000000000000001558 125.0
YYD1_k127_315628_16 chlorophyll binding - - - 0.00000000000000000005071 104.0
YYD1_k127_315628_17 - - - - 0.00000005273 65.0
YYD1_k127_315628_18 protein conserved in bacteria - - - 0.0000001308 64.0
YYD1_k127_315628_2 homolog of phage Mu protein gp47 - - - 5.213e-307 964.0
YYD1_k127_315628_3 Two component regulator propeller - - - 3.418e-262 829.0
YYD1_k127_315628_4 Protein of unknown function (DUF4255) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 554.0
YYD1_k127_315628_5 Late control gene D protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004569 535.0
YYD1_k127_315628_6 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 473.0
YYD1_k127_315628_7 MASE1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 426.0
YYD1_k127_315628_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006435 310.0
YYD1_k127_315628_9 Baseplate assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005304 278.0
YYD1_k127_315683_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000222 228.0
YYD1_k127_315683_1 - - - - 0.0000000000000000000000000000000000000000000000000000004295 203.0
YYD1_k127_315683_2 Peptidoglycan-binding domain 1 protein - - - 0.00000000000000003936 91.0
YYD1_k127_315683_3 deoxyhypusine monooxygenase activity K05385,K21010 - - 0.00000000001952 73.0
YYD1_k127_315683_4 - - - - 0.0000000007082 63.0
YYD1_k127_3179494_0 Integron-associated effector binding protein K13652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009067 275.0
YYD1_k127_3179494_1 Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002673 269.0
YYD1_k127_3179494_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001338 264.0
YYD1_k127_3179494_3 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000002265 169.0
YYD1_k127_3179494_4 - - - - 0.0000000000001163 79.0
YYD1_k127_3183663_0 antibiotic biosynthetic process K01434 - 3.5.1.11 8.982e-216 696.0
YYD1_k127_3183663_1 PFAM Glycosyl transferase, group 1 K00754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 396.0
YYD1_k127_3183663_2 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009633 290.0
YYD1_k127_3183663_3 deacetylase K01463 - - 0.000000000000000000000000000000000000000000000000000000000001742 217.0
YYD1_k127_3183663_4 alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000002258 159.0
YYD1_k127_3183663_5 Amino acid oxidase - - - 0.00000000000000000000000000000005356 139.0
YYD1_k127_3191770_0 protein kinase activity K13582,K13924 - 2.1.1.80,3.1.1.61 1.367e-235 753.0
YYD1_k127_3191770_1 translation initiation factor activity K03699 - - 0.000000000000000000000000000000000000000000000000817 184.0
YYD1_k127_3194824_0 Glycosyl transferase family 2 K20534 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 351.0
YYD1_k127_3194824_1 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002116 241.0
YYD1_k127_3194824_2 TonB-dependent receptor K16089 - - 0.00000000000000002775 95.0
YYD1_k127_3194824_3 MacB-like periplasmic core domain - - - 0.0001475 44.0
YYD1_k127_3198482_0 DNA polymerase X K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009588 556.0
YYD1_k127_3198482_1 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009326 316.0
YYD1_k127_3198482_2 GHMP kinases C terminal K07031 - 2.7.1.168 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007157 284.0
YYD1_k127_3198482_3 LD-carboxypeptidase K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000000001953 208.0
YYD1_k127_3201340_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 558.0
YYD1_k127_3201340_1 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008095 535.0
YYD1_k127_3201340_10 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.0000008438 60.0
YYD1_k127_3201340_2 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 333.0
YYD1_k127_3201340_3 PFAM Histidine triad (HIT) protein K19710 - 2.7.7.53 0.00000000000000000000000000000000000000000000002656 175.0
YYD1_k127_3201340_4 energy transducer activity K03832 - - 0.000000000000000000000000000000000000000000001687 188.0
YYD1_k127_3201340_5 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000005846 165.0
YYD1_k127_3201340_6 Penicillinase repressor - - - 0.00000000000000000000000000000000008667 137.0
YYD1_k127_3201340_7 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.000000000000000000000003667 103.0
YYD1_k127_3201340_8 energy transducer activity - - - 0.000000000000000013 93.0
YYD1_k127_3201340_9 salt-induced outer membrane protein K07283 - - 0.0000002342 61.0
YYD1_k127_3228734_0 Osmosensitive K channel His kinase sensor K07646 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 446.0
YYD1_k127_3228734_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 0.0000000000000000000000000000000000000000000000000000000000008681 211.0
YYD1_k127_3228734_2 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000004595 127.0
YYD1_k127_3228734_3 mannose-ethanolamine phosphotransferase activity - - - 0.00002866 57.0
YYD1_k127_3236469_0 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001142 249.0
YYD1_k127_3253676_0 Major facilitator K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 454.0
YYD1_k127_3253676_1 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000465 356.0
YYD1_k127_3253676_2 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003691 332.0
YYD1_k127_3253676_3 transposition, DNA-mediated - - - 0.00000000000000000000000000000000000000000000000000000001778 203.0
YYD1_k127_3253676_4 - - - - 0.00000000000000000000000000000005991 140.0
YYD1_k127_3253676_5 - K06921 - - 0.000002623 55.0
YYD1_k127_3257261_0 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 596.0
YYD1_k127_3257261_1 Belongs to the amidase family K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 528.0
YYD1_k127_3257261_2 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 494.0
YYD1_k127_3257261_3 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004487 458.0
YYD1_k127_3257261_4 Belongs to the glutaminase family K01425 - 3.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 453.0
YYD1_k127_3257261_5 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006888 384.0
YYD1_k127_3257261_6 amino acid K03294,K13868 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008359 342.0
YYD1_k127_3257261_7 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007296 302.0
YYD1_k127_3262398_0 metal-dependent hydrolase of the K07045,K14333,K15063,K20941 - 4.1.1.103,4.1.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 426.0
YYD1_k127_3262398_1 - - - - 0.00000000000000000000000142 113.0
YYD1_k127_3262398_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.000000000000000000000003386 107.0
YYD1_k127_3262398_3 peptidyl-tyrosine sulfation K13992 - - 0.000000000000000000001321 104.0
YYD1_k127_3262398_4 DNA-directed 5'-3' RNA polymerase activity K03046,K13797 GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.00000000000000007365 81.0
YYD1_k127_3262398_5 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.000000000009157 67.0
YYD1_k127_3262398_6 - - - - 0.000001261 59.0
YYD1_k127_3267022_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005599 452.0
YYD1_k127_3267022_1 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 392.0
YYD1_k127_3267022_2 Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001128 267.0
YYD1_k127_3267022_3 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000003491 179.0
YYD1_k127_3267022_4 cheY-homologous receiver domain - - - 0.000000000000000000000001025 109.0
YYD1_k127_3267022_5 PFAM Methyltransferase type 11 - - - 0.000000000000000000000005958 109.0
YYD1_k127_3267022_6 InterProIPR000673 IPR000780 IPR013656 IPR003661 IPR 003594 IPR005467 IPR009082 - - - 0.00001352 56.0
YYD1_k127_3267022_7 Domain of unknown function (DUF4115) - - - 0.00003423 57.0
YYD1_k127_3267022_8 general stress protein - - - 0.0001444 49.0
YYD1_k127_329584_0 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007615 464.0
YYD1_k127_329584_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008305 430.0
YYD1_k127_329584_2 HupE / UreJ protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 385.0
YYD1_k127_329584_3 COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide 5, 6-dimethylbenzimidazole phosphoribosyltransferase) K09883 - 6.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 374.0
YYD1_k127_329584_4 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007324 334.0
YYD1_k127_329584_5 Belongs to the GPAT DAPAT family - - - 0.0000000000000000000000000000000000000000000000000000000000000002742 232.0
YYD1_k127_329584_6 - - - - 0.0000000000000000000000000000000000001656 154.0
YYD1_k127_329584_7 Cysteine-rich CPXCG - - - 0.00000002055 60.0
YYD1_k127_329793_0 extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005321 338.0
YYD1_k127_329793_1 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000005516 243.0
YYD1_k127_329793_2 ATPases associated with a variety of cellular activities K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000003496 221.0
YYD1_k127_329793_3 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000001513 190.0
YYD1_k127_329793_4 Binding-protein-dependent transport system inner membrane component K02011 - - 0.00000000000000000000000000000000000000000001304 182.0
YYD1_k127_329793_5 TonB-dependent Receptor Plug K02014 - - 0.000000000000000000000000000003563 139.0
YYD1_k127_3299348_0 DNA topological change K03168 - 5.99.1.2 3.476e-305 957.0
YYD1_k127_3299348_1 WD40 domain protein beta Propeller K12132 - 2.7.11.1 2.698e-214 697.0
YYD1_k127_3299348_10 - - - - 0.0000000000000000000000000000007437 132.0
YYD1_k127_3299348_11 Cytochrome c - - - 0.000000000000000000000000003657 119.0
YYD1_k127_3299348_2 Protein of unknown function (DUF1800) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 604.0
YYD1_k127_3299348_3 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 601.0
YYD1_k127_3299348_4 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 587.0
YYD1_k127_3299348_5 Peptidase dimerisation domain K01439,K13049 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 494.0
YYD1_k127_3299348_6 peroxiredoxin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006266 481.0
YYD1_k127_3299348_7 response to abiotic stimulus K06867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 472.0
YYD1_k127_3299348_8 Twin-arginine translocation pathway signal sequence - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 420.0
YYD1_k127_3316353_0 Domain of unknown function - - - 1.257e-223 704.0
YYD1_k127_3316353_1 COG3119 Arylsulfatase A K01565 - 3.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005507 490.0
YYD1_k127_3316353_2 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000001239 115.0
YYD1_k127_3316353_3 glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.00000000000000000001117 99.0
YYD1_k127_3316353_4 COG3119 Arylsulfatase A - - - 0.000001952 52.0
YYD1_k127_3322473_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 2.792e-229 718.0
YYD1_k127_3322473_1 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 444.0
YYD1_k127_3322473_2 methyltransferase activity K21310 - 2.1.1.334 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 347.0
YYD1_k127_3322473_3 - - - - 0.0000000000000000000000000000000000000000000000000000000001933 220.0
YYD1_k127_3322473_4 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000006692 192.0
YYD1_k127_3322473_5 MOSC domain - - - 0.00000000000000000000000000000000000000000000002095 174.0
YYD1_k127_3322473_6 Protein of unknown function (DUF454) K09790 - - 0.00000000000000002305 91.0
YYD1_k127_3322473_7 2OG-Fe(II) oxygenase superfamily K07336,K07394 - - 0.00000000000003027 83.0
YYD1_k127_3322496_0 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 469.0
YYD1_k127_3322496_1 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000004689 265.0
YYD1_k127_3322496_10 ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.00000228 51.0
YYD1_k127_3322496_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000001768 250.0
YYD1_k127_3322496_3 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000001033 251.0
YYD1_k127_3322496_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000007389 206.0
YYD1_k127_3322496_5 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000001421 197.0
YYD1_k127_3322496_6 PFAM peptidase - - - 0.0000000000000000000000003965 121.0
YYD1_k127_3322496_7 bacterial (prokaryotic) histone like domain K03530 - - 0.0000000000000000000002033 100.0
YYD1_k127_3322496_8 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000000001256 96.0
YYD1_k127_3322496_9 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0000000000000000004981 90.0
YYD1_k127_3330670_0 peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004611 394.0
YYD1_k127_3330670_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000009939 152.0
YYD1_k127_3330670_2 PFAM TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000001963 130.0
YYD1_k127_3330670_3 SnoaL-like domain - - - 0.00003483 55.0
YYD1_k127_3332486_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1208.0
YYD1_k127_3332486_1 nucleotidyltransferase activity K01154,K07076 - 3.1.21.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 397.0
YYD1_k127_3332486_2 peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 377.0
YYD1_k127_3332486_3 PBS lyase HEAT-like repeat - - - 0.00000000000000000000000000000000008253 145.0
YYD1_k127_3332486_4 Transcription factor zinc-finger - - - 0.000000000000000000001019 102.0
YYD1_k127_3332486_5 deoxyhypusine monooxygenase activity - - - 0.000134 44.0
YYD1_k127_3353659_0 Acts as a magnesium transporter K04767,K06213,K15986 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 406.0
YYD1_k127_3353659_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 349.0
YYD1_k127_3353659_2 Domain of unknown function (DUF4010) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000809 297.0
YYD1_k127_3353659_3 - - - - 0.0000000000000000000000000000005919 130.0
YYD1_k127_3353659_4 - - - - 0.0000000000000000001148 95.0
YYD1_k127_3353659_5 Domain of unknown function (DUF4136) - - - 0.00000000000000005899 89.0
YYD1_k127_3353659_6 Domain of unknown function (DUF4136) - - - 0.00000000000000006191 88.0
YYD1_k127_3353659_7 TIGRFAM TonB K03832 - - 0.000000000000001207 79.0
YYD1_k127_3356261_0 aspartate-tRNA(Asn) ligase activity K01876 - 6.1.1.12 8.731e-201 641.0
YYD1_k127_3356261_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 512.0
YYD1_k127_3356261_10 PFAM CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000002316 222.0
YYD1_k127_3356261_11 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.000000000000000000000000000000000000000000000000000000913 195.0
YYD1_k127_3356261_12 CTP synthase activity K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016020,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 0.000000000000000000000000000000000001995 138.0
YYD1_k127_3356261_13 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K01489,K07042 - 3.5.4.5 0.0000000000000000005672 93.0
YYD1_k127_3356261_14 PFAM Photosynthetic reaction centre cytochrome C subunit K13992 - - 0.000000000000005689 82.0
YYD1_k127_3356261_16 - - - - 0.0003293 49.0
YYD1_k127_3356261_2 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002979 464.0
YYD1_k127_3356261_3 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 455.0
YYD1_k127_3356261_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 420.0
YYD1_k127_3356261_5 PhoH-like protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007031 377.0
YYD1_k127_3356261_6 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005039 362.0
YYD1_k127_3356261_7 dUTPase K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007644 327.0
YYD1_k127_3356261_8 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009272 312.0
YYD1_k127_3356261_9 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000006008 268.0
YYD1_k127_3415488_0 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 509.0
YYD1_k127_3415488_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 405.0
YYD1_k127_3415488_10 response regulator, receiver - - - 0.00000000000000000000000000004531 126.0
YYD1_k127_3415488_11 Capsular exopolysaccharide family K16554 - - 0.00000000005559 73.0
YYD1_k127_3415488_2 Glycosyl transferase WecB/TagA/CpsF family K05946 - 2.4.1.187 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007207 368.0
YYD1_k127_3415488_3 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 350.0
YYD1_k127_3415488_4 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001271 257.0
YYD1_k127_3415488_5 polysaccharide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000538 215.0
YYD1_k127_3415488_6 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000001584 188.0
YYD1_k127_3415488_7 Proton-conducting membrane transporter K12137 - - 0.00000000000000000000000000000000000000000002687 180.0
YYD1_k127_3415488_8 Polysaccharide biosynthesis/export protein K01991 - - 0.000000000000000000000000000000000001382 148.0
YYD1_k127_3415488_9 Chain length determinant protein - - - 0.000000000000000000000000000000009613 144.0
YYD1_k127_3436957_0 radical SAM domain protein - - - 8.254e-273 854.0
YYD1_k127_3436957_1 PFAM Amidohydrolase 3 - - - 7.726e-198 631.0
YYD1_k127_3436957_10 NPCBM K07019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001325 274.0
YYD1_k127_3436957_11 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000003404 224.0
YYD1_k127_3436957_12 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000007776 169.0
YYD1_k127_3436957_13 methyltransferase - - - 0.000000000000000000000000000000000000000001829 166.0
YYD1_k127_3436957_14 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000003157 161.0
YYD1_k127_3436957_15 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K07019 - - 0.000000000000000000000000000000000000003587 168.0
YYD1_k127_3436957_16 Kelch - - - 0.000000000000000000000000000000000000008439 166.0
YYD1_k127_3436957_17 -O-antigen - - - 0.00000000000000000000000000000000000002668 159.0
YYD1_k127_3436957_18 Alpha galactosidase A K07407 - 3.2.1.22 0.0000000000000000000000000000000000002409 161.0
YYD1_k127_3436957_19 Alpha galactosidase A K07407 - 3.2.1.22 0.0000000000000000000000000000000000009125 160.0
YYD1_k127_3436957_2 COG2133 Glucose sorbosone dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 500.0
YYD1_k127_3436957_20 Glycoside hydrolase 97 K01187 - 3.2.1.20 0.00000000000000000000000000000000003686 154.0
YYD1_k127_3436957_21 - - - - 0.00000000000000000000006764 111.0
YYD1_k127_3436957_22 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000000004286 98.0
YYD1_k127_3436957_23 Staphylococcal nuclease homologues K01174,K07038 - 3.1.31.1 0.000003768 55.0
YYD1_k127_3436957_3 Glycosyltransferase, group 1 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 379.0
YYD1_k127_3436957_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 360.0
YYD1_k127_3436957_5 H( )-stimulated, divalent metal cation uptake system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 349.0
YYD1_k127_3436957_6 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 357.0
YYD1_k127_3436957_7 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 345.0
YYD1_k127_3436957_8 6-phosphogluconolactonase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003836 291.0
YYD1_k127_3436957_9 6-phosphogluconolactonase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007029 268.0
YYD1_k127_3441027_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000023 228.0
YYD1_k127_3441027_1 - - - - 0.000000000000000000000000003309 126.0
YYD1_k127_3441027_2 - - - - 0.0000000000000002579 93.0
YYD1_k127_3441027_3 Protein of unknown function (DUF541) K09807 - - 0.00000000000004335 82.0
YYD1_k127_3441027_4 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000121 70.0
YYD1_k127_346228_0 PFAM asparagine synthase K06864 - - 0.00000000000000000000000000000000000000000000000003628 183.0
YYD1_k127_346228_1 Protein of unknown function (DUF2723) - - - 0.00000000000001115 88.0
YYD1_k127_3465826_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009405,GO:0009605,GO:0009607,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030312,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0035821,GO:0036094,GO:0040007,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043207,GO:0043492,GO:0043952,GO:0044003,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0050896,GO:0051179,GO:0051234,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052564,GO:0052572,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0075136,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 3.216e-212 680.0
YYD1_k127_3465826_1 c-di-gmp phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000595 282.0
YYD1_k127_3465826_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000002809 193.0
YYD1_k127_3465826_3 - - - - 0.00000002101 59.0
YYD1_k127_348496_0 PFAM Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 499.0
YYD1_k127_348496_1 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005441 376.0
YYD1_k127_348496_2 Dihydrodipicolinate reductase, N-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008316 301.0
YYD1_k127_348496_3 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07712 - - 0.000000000000000000000000000000000000000000000000000000000000000002212 256.0
YYD1_k127_348496_4 cheY-homologous receiver domain - - - 0.000000000000000000000000000008694 122.0
YYD1_k127_3491080_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1054.0
YYD1_k127_3491080_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 516.0
YYD1_k127_3491080_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 338.0
YYD1_k127_3493208_0 Domain of unknown function (DUF1998) K06877 - - 1.203e-290 912.0
YYD1_k127_3493208_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 4.952e-222 696.0
YYD1_k127_3493208_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 2.763e-200 634.0
YYD1_k127_3493208_3 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004222 262.0
YYD1_k127_3493208_4 Exonuclease K07502 - - 0.000000000000000000000000000000000000000000000000002817 201.0
YYD1_k127_3493208_5 Nodulation protein S (NodS) - - - 0.00000000000000000000000000000000000000000003711 170.0
YYD1_k127_3493208_6 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000003011 147.0
YYD1_k127_3493208_7 manganese ion transmembrane transporter activity - - - 0.00000000000000000000000000003038 136.0
YYD1_k127_3493208_8 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000005588 116.0
YYD1_k127_3493208_9 O-Antigen ligase - - - 0.0001679 55.0
YYD1_k127_3508847_0 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006321 292.0
YYD1_k127_3508847_1 mandelate racemase muconate lactonizing K01684,K01781,K08323 - 4.2.1.6,4.2.1.8,5.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002274 293.0
YYD1_k127_3508847_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000001067 253.0
YYD1_k127_3508847_3 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000001369 229.0
YYD1_k127_3508847_4 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.0000000000000000000000000000000000000000002747 166.0
YYD1_k127_3508847_5 pfam nudix - - - 0.000000000000000000000000000001464 134.0
YYD1_k127_3508847_6 domain protein - - - 0.0000002453 57.0
YYD1_k127_3525172_0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01585 - 4.1.1.19 3.352e-305 946.0
YYD1_k127_3525172_1 Threonine synthase N terminus K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000003645 228.0
YYD1_k127_3525172_2 protein kinase activity - - - 0.00000000000000000000000000000000000000001069 172.0
YYD1_k127_3525172_3 Thioesterase superfamily K10806 - - 0.00000000000000000000000000001299 126.0
YYD1_k127_3525172_4 Threonine synthase K01733 GO:0003674,GO:0003824,GO:0004795,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009088,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.3.1 0.00000000005825 64.0
YYD1_k127_3531876_0 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005722 593.0
YYD1_k127_3531876_1 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 582.0
YYD1_k127_3531876_10 (ABC) transporter - - - 0.00000000000000000000000000000000000000000000000000000000006996 210.0
YYD1_k127_3531876_11 methyltransferase - - - 0.000000000000000000000000000000002211 137.0
YYD1_k127_3531876_12 - - - - 0.00000000000000000000000002359 121.0
YYD1_k127_3531876_13 MacB-like periplasmic core domain - - - 0.000006563 57.0
YYD1_k127_3531876_2 periplasmic solute binding protein K02077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 370.0
YYD1_k127_3531876_3 phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003308 379.0
YYD1_k127_3531876_4 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005627 312.0
YYD1_k127_3531876_5 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007573 322.0
YYD1_k127_3531876_6 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000007441 255.0
YYD1_k127_3531876_7 Oxidoreductase molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007713 263.0
YYD1_k127_3531876_8 pfam abc-3 K09816 - - 0.0000000000000000000000000000000000000000000000000000000000000006523 235.0
YYD1_k127_3531876_9 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000000000001459 223.0
YYD1_k127_3545079_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008379 458.0
YYD1_k127_3545079_1 Ammonium Transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000002652 222.0
YYD1_k127_3545079_2 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000000000001328 140.0
YYD1_k127_3545079_3 - - - - 0.000000000000000051 91.0
YYD1_k127_3545079_4 - - - - 0.0001027 53.0
YYD1_k127_3546447_0 Uncharacterised protein family UPF0052 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001066 286.0
YYD1_k127_3546447_1 Allomyces macrogynus ATCC 38327 K08678 - 4.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000001586 264.0
YYD1_k127_3546447_10 - - - - 0.000000000000000001362 88.0
YYD1_k127_3546447_2 NHase catalyzes the hydration of various nitrile compounds to the corresponding amides K20807 - 4.2.1.84 0.0000000000000000000000000000000000000000000000000000000000000000000000001481 253.0
YYD1_k127_3546447_4 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000725 230.0
YYD1_k127_3546447_5 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000006871 199.0
YYD1_k127_3546447_6 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000001561 184.0
YYD1_k127_3546447_7 Nitrile hydratase beta subunit - - - 0.00000000000000000000000000000000539 143.0
YYD1_k127_3546447_8 haloacid dehalogenase-like hydrolase K01489 - 3.5.4.5 0.0000000000000000000000000001921 123.0
YYD1_k127_3546447_9 High-affinity nickel-transport protein K07241 - - 0.0000000000000000000000000007924 128.0
YYD1_k127_3553615_0 Protein of unknown function (DUF521) K09123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 368.0
YYD1_k127_3553615_1 Disulphide isomerase - - - 0.00000000000000000000000000000000000000000000002641 173.0
YYD1_k127_3553615_2 Protein of unknown function DUF126 K09128 - - 0.000000000000000000000000000000000001089 154.0
YYD1_k127_3553615_3 cAMP biosynthetic process - - - 0.0000000000000000000003223 113.0
YYD1_k127_3553615_4 Involved in the TonB-independent uptake of proteins K03641 - - 0.0000000000000000001446 104.0
YYD1_k127_3553615_5 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.0001412 49.0
YYD1_k127_3555846_0 amine dehydrogenase activity - - - 2.341e-248 798.0
YYD1_k127_3555846_1 - - - - 0.00000000000000000000000000000000000001698 156.0
YYD1_k127_3555846_2 Protease prsW family - - - 0.0000000000000000000000000004093 126.0
YYD1_k127_3555846_3 Histidine kinase - - - 0.00000000000000000000000008944 123.0
YYD1_k127_3555846_4 Domain of unknown function (DUF1330) - - - 0.0000000000004392 73.0
YYD1_k127_3555846_5 oxidative phosphorylation K00426 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0016682,GO:0019646,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:1901363 1.10.3.14 0.00000000002082 70.0
YYD1_k127_3555846_6 - - - - 0.000002322 53.0
YYD1_k127_3558822_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 3.864e-273 852.0
YYD1_k127_3558822_1 Belongs to the argininosuccinate synthase family. Type 2 subfamily K01940 - 6.3.4.5 1.843e-236 736.0
YYD1_k127_3558822_2 PFAM phosphoesterase, RecJ domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001125 286.0
YYD1_k127_3558822_3 Acetyltransferase (GNAT) family K03823 - 2.3.1.183 0.00000000000000000000000000000000000000000000000000000000000000002069 227.0
YYD1_k127_3558822_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000004474 166.0
YYD1_k127_3558822_5 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.000000000000000000000000000004757 130.0
YYD1_k127_3558822_6 von Willebrand factor, type A - - - 0.00000000000000000000000000004763 136.0
YYD1_k127_3558822_7 Tetratricopeptide repeats - - - 0.00000000000002412 86.0
YYD1_k127_3571209_0 Acetyl-coenzyme A synthetase N-terminus K01895 - 6.2.1.1 5.886e-303 945.0
YYD1_k127_3571209_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 1.145e-231 728.0
YYD1_k127_3571209_10 - - - - 0.000000000000000000000000000000000000000009954 158.0
YYD1_k127_3571209_11 - - - - 0.0000000000000000000000008697 117.0
YYD1_k127_3571209_12 Protein of unknown function, DUF485 - - - 0.0000000000000000000001896 100.0
YYD1_k127_3571209_13 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.00000000000002204 75.0
YYD1_k127_3571209_2 PQQ enzyme repeat K00117 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 619.0
YYD1_k127_3571209_3 PQQ-like domain K00117 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005118 591.0
YYD1_k127_3571209_4 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008357 402.0
YYD1_k127_3571209_5 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005375 332.0
YYD1_k127_3571209_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001294 267.0
YYD1_k127_3571209_7 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000119 239.0
YYD1_k127_3571209_8 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000000000000000000001136 194.0
YYD1_k127_3571209_9 - - - - 0.0000000000000000000000000000000000000000005463 171.0
YYD1_k127_3574477_0 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 539.0
YYD1_k127_3574477_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000006874 220.0
YYD1_k127_3574477_2 - - - - 0.00000000000000000000000000000000000000000000000000000002917 204.0
YYD1_k127_3575027_0 PFAM ABC transporter - - - 5.052e-290 899.0
YYD1_k127_3575027_1 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 400.0
YYD1_k127_3575027_2 pfam abc K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004712 332.0
YYD1_k127_3575027_3 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000001407 252.0
YYD1_k127_3575027_4 ANTAR - - - 0.000000000000000000000000000000000000000000000000000000000000000006958 229.0
YYD1_k127_3575027_5 phospholipase Carboxylesterase - - - 0.000000000000000000000000000000000000000000000000000000000000002709 234.0
YYD1_k127_3575027_6 Biotin-lipoyl like K01993 - - 0.0000000000000000000000000000000000000000000003076 181.0
YYD1_k127_3575027_7 FR47-like protein - - - 0.0000000000000000000000000000000000000000002568 166.0
YYD1_k127_3575027_8 Transcriptional regulator - - - 0.00000000000000000000000000001373 135.0
YYD1_k127_3576146_0 Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 5.365e-211 667.0
YYD1_k127_3576146_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 580.0
YYD1_k127_3576146_10 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 335.0
YYD1_k127_3576146_11 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 343.0
YYD1_k127_3576146_12 Belongs to the ABC transporter superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009588 333.0
YYD1_k127_3576146_13 Belongs to the ABC transporter superfamily K02031,K02032,K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 313.0
YYD1_k127_3576146_14 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 313.0
YYD1_k127_3576146_15 UbiA prenyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000579 290.0
YYD1_k127_3576146_16 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000004386 235.0
YYD1_k127_3576146_17 Probable zinc-ribbon domain - - - 0.000000000000000000000000000000000000000003659 156.0
YYD1_k127_3576146_18 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000000000000000000002195 132.0
YYD1_k127_3576146_19 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000001334 100.0
YYD1_k127_3576146_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 535.0
YYD1_k127_3576146_20 Peptidase M56 - - - 0.0000002111 63.0
YYD1_k127_3576146_21 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 0.000003682 48.0
YYD1_k127_3576146_22 Carboxypeptidase regulatory-like domain - - - 0.0001271 55.0
YYD1_k127_3576146_23 - - - - 0.0002345 49.0
YYD1_k127_3576146_3 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 518.0
YYD1_k127_3576146_4 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006548 495.0
YYD1_k127_3576146_5 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004935 454.0
YYD1_k127_3576146_6 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004985 451.0
YYD1_k127_3576146_7 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007181 412.0
YYD1_k127_3576146_8 Phosphoglycerate mutase family K01834 - 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008572 383.0
YYD1_k127_3576146_9 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 386.0
YYD1_k127_3579670_0 belongs to the thioredoxin family K05838 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 440.0
YYD1_k127_3579670_1 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 444.0
YYD1_k127_3579670_2 belongs to the thioredoxin family K03671,K05838 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009752 368.0
YYD1_k127_3579670_3 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000002757 121.0
YYD1_k127_3579670_4 Tetratricopeptide repeat - - - 0.000000000000002215 90.0
YYD1_k127_3579670_5 repeat-containing protein - - - 0.0000001797 63.0
YYD1_k127_3600074_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 582.0
YYD1_k127_3600074_1 Transposase IS116 IS110 IS902 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000004547 228.0
YYD1_k127_3600074_2 amine dehydrogenase activity - - - 0.0000000000000000000000000000002342 126.0
YYD1_k127_3615104_0 Flavin containing amine oxidoreductase - - - 1.495e-225 715.0
YYD1_k127_3615104_1 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 395.0
YYD1_k127_3615104_2 Adenylate Guanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004624 312.0
YYD1_k127_3615104_3 - - - - 0.0000000001973 70.0
YYD1_k127_3622168_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 1.371e-278 880.0
YYD1_k127_3622168_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 8.92e-196 625.0
YYD1_k127_3622168_2 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007173 267.0
YYD1_k127_3622168_3 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000001631 208.0
YYD1_k127_3622168_4 CDP-alcohol phosphatidyltransferase - - - 0.000000000000000000000000000000000000000000000002413 191.0
YYD1_k127_3622168_5 COG4635 Flavodoxin K00230 - 1.3.5.3 0.000000000004695 67.0
YYD1_k127_3624824_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 342.0
YYD1_k127_3624824_1 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001951 278.0
YYD1_k127_3624824_2 electron transfer activity - - - 0.0000000000000000000000000000000000000000001926 176.0
YYD1_k127_3624824_3 Carboxypeptidase regulatory-like domain K14475 - - 0.00000005481 64.0
YYD1_k127_362824_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 2.306e-194 637.0
YYD1_k127_362824_1 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 611.0
YYD1_k127_362824_2 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004966 572.0
YYD1_k127_362824_3 PIN domain - - - 0.0000000000000000000000000000000000000002165 154.0
YYD1_k127_362824_4 - K06862 - - 0.000000000000000000000000000000006455 129.0
YYD1_k127_362824_5 positive regulation of growth - - - 0.000000000000000004197 86.0
YYD1_k127_3638345_0 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005839 414.0
YYD1_k127_3638345_1 AAA ATPase domain - - - 0.000000000000000000000000000000000000000000000000000000000005143 231.0
YYD1_k127_3638345_2 - - - - 0.0000000001681 72.0
YYD1_k127_3646219_0 PFAM Radical SAM - - - 2.678e-223 702.0
YYD1_k127_3646219_1 lipolytic protein G-D-S-L family - - - 2.646e-206 651.0
YYD1_k127_3646219_2 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006344 408.0
YYD1_k127_3646219_3 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009496 295.0
YYD1_k127_3646219_4 PFAM TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000000001747 151.0
YYD1_k127_3646219_5 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000001055 135.0
YYD1_k127_3646219_6 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.000008218 53.0
YYD1_k127_3646419_0 serine-type peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 292.0
YYD1_k127_3646419_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000002219 196.0
YYD1_k127_3646419_2 - - - - 0.000000000000000000000000000000002753 138.0
YYD1_k127_3646419_3 PFAM 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) - - - 0.0000003706 59.0
YYD1_k127_3646419_4 - - - - 0.000001102 59.0
YYD1_k127_3647258_0 TonB dependent receptor K16090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 514.0
YYD1_k127_3647258_1 PFAM Carbamoyl-phosphate synthase L chain, ATP binding domain K01955 GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 357.0
YYD1_k127_3647258_2 pkhd-type hydroxylase K07336 GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0033554,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0098771 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 348.0
YYD1_k127_3647258_3 PepSY-associated TM region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004583 351.0
YYD1_k127_3647258_4 von Willebrand factor, type A - - - 0.00000000000000000000000000000000002347 147.0
YYD1_k127_3661597_0 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 582.0
YYD1_k127_3661597_1 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 544.0
YYD1_k127_3661597_10 - - - - 0.000000000005295 67.0
YYD1_k127_3661597_11 Tetratricopeptide TPR_2 repeat protein - - - 0.0000004558 62.0
YYD1_k127_3661597_2 Pantothenic acid kinase K00867 GO:0003674,GO:0003824,GO:0004594,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000759 426.0
YYD1_k127_3661597_3 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 319.0
YYD1_k127_3661597_4 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000004103 268.0
YYD1_k127_3661597_5 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000002667 220.0
YYD1_k127_3661597_6 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000007237 190.0
YYD1_k127_3661597_7 Sporulation and spore germination - - - 0.00000000000000000000008319 106.0
YYD1_k127_3661597_8 Cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0000000000000000000006522 110.0
YYD1_k127_3661597_9 Conserved TM helix - - - 0.00000000000000002249 91.0
YYD1_k127_3693006_0 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 458.0
YYD1_k127_3693006_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 444.0
YYD1_k127_3693006_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 306.0
YYD1_k127_3693006_3 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.15 0.000000000000000000000000000003079 122.0
YYD1_k127_3693006_4 Collagen triple helix repeat (20 copies) - - - 0.0000000000000000000000008273 117.0
YYD1_k127_3693006_5 Type IV Pilus-assembly protein W K02672 - - 0.000002034 61.0
YYD1_k127_3705332_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 9.697e-230 721.0
YYD1_k127_3705332_1 transmembrane transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 366.0
YYD1_k127_3705332_2 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000005733 209.0
YYD1_k127_3705332_3 Belongs to the HesB IscA family K15724 - - 0.00000000000000000000000000000002787 130.0
YYD1_k127_3705332_4 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.000000000000000000000000002898 118.0
YYD1_k127_3705332_5 Belongs to the Fur family K03711 - - 0.00000000000000000000000004109 121.0
YYD1_k127_3705332_6 ABC transporter, ATP-binding protein K02065 - - 0.00000000005349 72.0
YYD1_k127_3705332_7 Cold-Shock Protein K03704 - - 0.0000000001906 64.0
YYD1_k127_3705332_8 - - - - 0.00001496 57.0
YYD1_k127_3712638_0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 553.0
YYD1_k127_3712638_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000005426 146.0
YYD1_k127_3712638_2 PFAM Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.00000000000000000000000000000021 124.0
YYD1_k127_3716067_0 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 465.0
YYD1_k127_3716067_1 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 303.0
YYD1_k127_3716067_2 Sucrose-6F-phosphate phosphohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001562 289.0
YYD1_k127_3716067_3 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000006833 170.0
YYD1_k127_3716067_4 Protein of unknown function (DUF3302) - - - 0.000000000000000000000000000000000009163 142.0
YYD1_k127_3716067_5 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.000000001145 64.0
YYD1_k127_373508_0 TonB-dependent receptor - - - 0.0000000000000000000000000000009173 140.0
YYD1_k127_373508_1 - - - - 0.000000000000000000000003305 113.0
YYD1_k127_3738260_0 Monomeric isocitrate dehydrogenase K00031 - 1.1.1.42 0.0 1065.0
YYD1_k127_3738260_1 Carbohydrate family 9 binding domain-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 621.0
YYD1_k127_3738260_10 DinB family - - - 0.000000000000000000000000004941 116.0
YYD1_k127_3738260_11 Glycosyl transferase, family 2 - - - 0.00000000000000000000000001409 124.0
YYD1_k127_3738260_12 Lysin motif - - - 0.00000000000000000001641 96.0
YYD1_k127_3738260_13 - - - - 0.000003562 53.0
YYD1_k127_3738260_2 Peptidase, M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 546.0
YYD1_k127_3738260_3 Peptidase, M61 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009537 550.0
YYD1_k127_3738260_4 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007243 437.0
YYD1_k127_3738260_5 Peptidase, M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005817 416.0
YYD1_k127_3738260_6 FAD linked oxidases, C-terminal domain K00803 - 2.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 302.0
YYD1_k127_3738260_7 PFAM Asparaginase K01424 - 3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000004922 233.0
YYD1_k127_3738260_8 methyltransferase activity K02169 - 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000583 206.0
YYD1_k127_3738260_9 - - - - 0.0000000000000000000000000000000000000103 151.0
YYD1_k127_3746776_0 MacB-like periplasmic core domain - - - 5.396e-234 748.0
YYD1_k127_3746776_1 Belongs to the HpcH HpaI aldolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 368.0
YYD1_k127_3746776_2 Phosphoenolpyruvate phosphomutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 347.0
YYD1_k127_3746776_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006539 301.0
YYD1_k127_3746776_4 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000001697 141.0
YYD1_k127_3746776_5 - - - - 0.00000000000000000000001239 111.0
YYD1_k127_3754292_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006795 446.0
YYD1_k127_3754292_1 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002524 291.0
YYD1_k127_3754292_2 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000005656 250.0
YYD1_k127_3754292_3 Aerotolerance regulator N-terminal - - - 0.000000000000000000000000000000000000000000101 181.0
YYD1_k127_3763012_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 3.594e-272 860.0
YYD1_k127_3763012_1 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 618.0
YYD1_k127_3763012_10 DinB family - - - 0.00000000000000000000000000000000000008559 148.0
YYD1_k127_3763012_11 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000001405 132.0
YYD1_k127_3763012_12 Predicted membrane protein (DUF2306) - - - 0.00000000000000000000000000000007396 132.0
YYD1_k127_3763012_13 Domain of unknown function (DU1801) - - - 0.0000000000000000000009247 100.0
YYD1_k127_3763012_2 PFAM beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 413.0
YYD1_k127_3763012_3 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004493 421.0
YYD1_k127_3763012_4 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 303.0
YYD1_k127_3763012_5 PFAM ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004632 267.0
YYD1_k127_3763012_6 2Fe-2S -binding domain protein K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000001164 241.0
YYD1_k127_3763012_7 tRNA wobble adenosine to inosine editing - - - 0.000000000000000000000000000000000000000000000000000000000000000002128 239.0
YYD1_k127_3763012_8 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000000001572 169.0
YYD1_k127_3763012_9 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000009415 164.0
YYD1_k127_3766256_0 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000005335 243.0
YYD1_k127_3766256_1 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000001094 211.0
YYD1_k127_3766256_2 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000008871 182.0
YYD1_k127_3766256_3 glycosyl transferase family - - - 0.00000000000000000000000000000000006394 153.0
YYD1_k127_3766256_4 GDSL-like Lipase/Acylhydrolase - - - 0.0000000009776 70.0
YYD1_k127_3770618_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 606.0
YYD1_k127_3770618_1 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 338.0
YYD1_k127_3770618_2 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004975 268.0
YYD1_k127_3770618_3 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000003879 137.0
YYD1_k127_3785420_0 PFAM sulfatase K01130 - 3.1.6.1 2.166e-213 675.0
YYD1_k127_3785420_1 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007276 297.0
YYD1_k127_3785420_2 cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000001297 243.0
YYD1_k127_3785420_3 MacB-like periplasmic core domain - - - 0.0000168 52.0
YYD1_k127_3786145_0 Glutamate synthase central domain K00265,K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016020,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 0.0 2050.0
YYD1_k127_3786145_1 Flavin containing amine oxidoreductase K00266 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.4.1.13,1.4.1.14 5.392e-236 737.0
YYD1_k127_3786145_10 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006201 293.0
YYD1_k127_3786145_11 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000001618 254.0
YYD1_k127_3786145_12 transferase hexapeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000003254 236.0
YYD1_k127_3786145_13 3-demethylubiquinone-9 3-O-methyltransferase activity K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000002422 208.0
YYD1_k127_3786145_14 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000454 143.0
YYD1_k127_3786145_15 RmlD substrate binding domain - - - 0.000000000000000000000000000004988 132.0
YYD1_k127_3786145_16 DNA-templated transcription, initiation - - - 0.0000000000000000000000000001357 126.0
YYD1_k127_3786145_18 - - - - 0.0000000000000001199 92.0
YYD1_k127_3786145_2 O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000849 581.0
YYD1_k127_3786145_20 Methyltransferase domain - - - 0.000000001094 70.0
YYD1_k127_3786145_21 collagen metabolic process K08677 - - 0.000000002073 69.0
YYD1_k127_3786145_3 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000708 572.0
YYD1_k127_3786145_4 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 491.0
YYD1_k127_3786145_5 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 484.0
YYD1_k127_3786145_6 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012,K00066 - 1.1.1.132,1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006061 473.0
YYD1_k127_3786145_7 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 450.0
YYD1_k127_3786145_8 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 389.0
YYD1_k127_3786145_9 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 348.0
YYD1_k127_3791175_0 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 339.0
YYD1_k127_3791175_1 Methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000005991 183.0
YYD1_k127_3791175_2 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000006369 191.0
YYD1_k127_3791175_3 heme binding K08259 - 3.4.24.75 0.000000000000000000000000000000000000000000003105 175.0
YYD1_k127_3791175_4 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000256 157.0
YYD1_k127_3791175_5 PFAM regulatory protein LuxR - - - 0.0000000000000000003296 92.0
YYD1_k127_3791175_6 serine threonine protein kinase - - - 0.0000000000000004394 89.0
YYD1_k127_3791175_7 Cytochrome c - - - 0.000000000000001068 83.0
YYD1_k127_3791175_8 Domain of unknown function (DUF4390) - - - 0.00000001375 63.0
YYD1_k127_3791175_9 tail specific protease K03797 GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009579,GO:0016787,GO:0019538,GO:0031977,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044436,GO:0044444,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.102 0.0003627 47.0
YYD1_k127_379614_0 glutamine synthetase K01915 - 6.3.1.2 2.478e-222 700.0
YYD1_k127_379614_1 Glutamine synthetase type III K01915 - 6.3.1.2 1.153e-211 668.0
YYD1_k127_379614_2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000001587 71.0
YYD1_k127_3801153_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 GO:0003674,GO:0003824,GO:0003861,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009316,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 4.2.1.33,4.2.1.35 2.859e-208 656.0
YYD1_k127_3801153_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000576 457.0
YYD1_k127_3801153_2 Transcriptional regulator, LysR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002909 257.0
YYD1_k127_3801153_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000003228 234.0
YYD1_k127_3801153_4 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000000007404 186.0
YYD1_k127_3801153_5 23S rRNA-intervening sequence protein - - - 0.0000663 50.0
YYD1_k127_3832430_0 Inorganic ion transport and metabolism K03319 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007858 336.0
YYD1_k127_3832430_1 Putative esterase K07214 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 317.0
YYD1_k127_3832430_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000002857 163.0
YYD1_k127_3832430_3 - - - - 0.0000000000000000000000000000000000000003652 155.0
YYD1_k127_3832430_4 - - - - 0.0000000000000000000000000000008954 128.0
YYD1_k127_3832430_5 - - - - 0.0000000000000008605 83.0
YYD1_k127_3832430_6 - - - - 0.0000000000236 74.0
YYD1_k127_3832669_0 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000001362 185.0
YYD1_k127_3832669_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000001492 129.0
YYD1_k127_3832669_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000008926 94.0
YYD1_k127_3832669_3 Transcriptional regulator - - - 0.0000000007488 69.0
YYD1_k127_3832669_4 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.000006379 59.0
YYD1_k127_3859382_0 PFAM Aminotransferase class I and II K14267 - 2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005447 527.0
YYD1_k127_3859382_1 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 422.0
YYD1_k127_3859382_2 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 430.0
YYD1_k127_3859382_3 NHL repeat containing protein - - - 0.00000000000000000000000000000000000001657 160.0
YYD1_k127_3859382_4 Cytochrome c mono- and diheme variants - - - 0.0000000000000000000000000000000000003141 150.0
YYD1_k127_3871661_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1088.0
YYD1_k127_3871661_1 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005499 355.0
YYD1_k127_3871661_2 Flavodoxin-like fold K00355 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001892 281.0
YYD1_k127_3871661_3 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0001072 53.0
YYD1_k127_3916071_0 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000001159 246.0
YYD1_k127_3916071_1 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000001068 188.0
YYD1_k127_3916071_2 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000006545 128.0
YYD1_k127_3916071_3 - - - - 0.000000000000000000000001056 116.0
YYD1_k127_3916071_5 LppP/LprE lipoprotein - - - 0.0000000000000000001035 99.0
YYD1_k127_3916071_6 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 0.000000000000000004033 86.0
YYD1_k127_3916071_7 - - - - 0.000003436 55.0
YYD1_k127_39164_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006546 514.0
YYD1_k127_39164_1 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002679 257.0
YYD1_k127_39164_2 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000008636 234.0
YYD1_k127_39164_3 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000008732 136.0
YYD1_k127_39164_4 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000007161 143.0
YYD1_k127_39164_5 Acetyltransferase (GNAT) domain - - - 0.0000002889 54.0
YYD1_k127_3928080_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 5.377e-199 646.0
YYD1_k127_3928080_1 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001205 255.0
YYD1_k127_3928080_2 ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002249 274.0
YYD1_k127_3928080_3 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000008494 184.0
YYD1_k127_3928080_4 MOFRL family K11529 - 2.7.1.165 0.000000000000000000000000000000000000000002898 161.0
YYD1_k127_3928080_5 von Willebrand factor, type A K07114 - - 0.000000000000000000000000001159 126.0
YYD1_k127_3928080_6 TIGRFAM TonB family protein K03832 - - 0.0000000000000000000000006626 115.0
YYD1_k127_3928080_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000008812 69.0
YYD1_k127_3948996_0 DEAD/H associated K03724 - - 0.0 1349.0
YYD1_k127_3948996_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 313.0
YYD1_k127_3977738_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 385.0
YYD1_k127_3977738_1 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002084 272.0
YYD1_k127_3977738_10 von Willebrand factor (vWF) type A domain K07114,K12511 - - 0.00007011 54.0
YYD1_k127_3977738_2 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000002801 252.0
YYD1_k127_3977738_3 Inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000005062 255.0
YYD1_k127_3977738_4 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000003537 216.0
YYD1_k127_3977738_5 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.00000000000000000000000000001648 123.0
YYD1_k127_3977738_6 oligosaccharyl transferase activity K00721 - 2.4.1.83 0.00000000000000000000000000006686 133.0
YYD1_k127_3977738_7 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000000001111 126.0
YYD1_k127_3977738_8 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000002397 116.0
YYD1_k127_3977738_9 - - - - 0.0000005457 61.0
YYD1_k127_399482_0 - - - - 2.068e-216 690.0
YYD1_k127_399482_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 623.0
YYD1_k127_399482_10 Epidermal growth factor-like domain. - - - 0.0002263 53.0
YYD1_k127_399482_2 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 375.0
YYD1_k127_399482_3 FHA Domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004602 287.0
YYD1_k127_399482_4 AhpC/TSA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000148 267.0
YYD1_k127_399482_5 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000006599 219.0
YYD1_k127_399482_6 serine-type aminopeptidase activity K02030,K14475 - - 0.0000000000000000002293 91.0
YYD1_k127_399482_7 Papain family cysteine protease - - - 0.00000000000000005261 92.0
YYD1_k127_399482_8 efflux transmembrane transporter activity K02004 - - 0.0000000000000005769 79.0
YYD1_k127_399482_9 Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins. - - - 0.00001949 49.0
YYD1_k127_4013836_0 Carboxypeptidase regulatory-like domain - - - 4.904e-302 957.0
YYD1_k127_4013836_1 oxidoreductase activity - - - 1.704e-258 819.0
YYD1_k127_4013836_10 Cupin domain - - - 0.0000000000000000000000004708 109.0
YYD1_k127_4013836_11 - - - - 0.00000000000000000000002179 110.0
YYD1_k127_4013836_12 Amidohydrolase family - - - 0.000000000000129 73.0
YYD1_k127_4013836_13 cellular response to DNA damage stimulus K07340 - - 0.000000000005895 72.0
YYD1_k127_4013836_15 - - - - 0.0001163 49.0
YYD1_k127_4013836_2 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006003 439.0
YYD1_k127_4013836_3 Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 386.0
YYD1_k127_4013836_4 SelR domain K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000004058 227.0
YYD1_k127_4013836_5 conserved protein - - - 0.000000000000000000000000000000000000000000000000000000000000005109 231.0
YYD1_k127_4013836_6 - K02172 - - 0.000000000000000000000000000000000000000000000000000000004154 212.0
YYD1_k127_4013836_7 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000000000000000000000007698 182.0
YYD1_k127_4013836_8 - K02172 - - 0.000000000000000000000000000000000000000000000001594 184.0
YYD1_k127_4013836_9 TraB family K09973 - - 0.0000000000000000000000000000000000000000000001039 182.0
YYD1_k127_4021188_0 Belongs to the MurCDEF family K01921,K01924,K02558 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0016874,GO:0016879,GO:0016881,GO:0042802,GO:0044424,GO:0044464 6.3.2.4,6.3.2.45,6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 413.0
YYD1_k127_4021188_1 PFAM Allophanate hydrolase subunit 2 K06350 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006506 389.0
YYD1_k127_4021188_2 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004713 342.0
YYD1_k127_4021188_3 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002443 321.0
YYD1_k127_4021188_4 FR47-like protein K18816 - 2.3.1.82 0.000000000000000000000000000000000001486 144.0
YYD1_k127_402807_0 COG1131 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 431.0
YYD1_k127_402807_1 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 380.0
YYD1_k127_402807_2 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000004974 211.0
YYD1_k127_402807_3 BlaR1 peptidase M56 - - - 0.00000000000000000000000000000000000000000000000000000000005476 228.0
YYD1_k127_402807_4 Penicillinase repressor - - - 0.00000000000000000000000000000000000000006133 154.0
YYD1_k127_402807_5 - - - - 0.0000000000000000000000000000001803 132.0
YYD1_k127_402807_6 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000000000002731 101.0
YYD1_k127_402807_7 transport - - - 0.000000007189 66.0
YYD1_k127_402807_8 BlaR1 peptidase M56 - - - 0.00000007624 63.0
YYD1_k127_40408_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 2.799e-282 899.0
YYD1_k127_40408_1 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009099 452.0
YYD1_k127_40408_2 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 406.0
YYD1_k127_40408_3 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001847 273.0
YYD1_k127_40408_4 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002065 273.0
YYD1_k127_40408_5 lipolytic protein G-D-S-L family K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.0000000000000000000000000000000000000000000000000006037 194.0
YYD1_k127_40408_6 Serine/threonine phosphatases, family 2C, catalytic domain K01090 - 3.1.3.16 0.00000000000000000000000000000000000000004115 160.0
YYD1_k127_40408_7 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.0000000000000000000000000000000000003276 148.0
YYD1_k127_40408_8 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.00000000000000002745 85.0
YYD1_k127_4048935_0 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 2.002e-265 833.0
YYD1_k127_4048935_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 523.0
YYD1_k127_4048935_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000003163 229.0
YYD1_k127_4048935_11 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000184 172.0
YYD1_k127_4048935_12 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000001316 169.0
YYD1_k127_4048935_13 May be involved in cell division - - - 0.000000000000000000000000000000000000001036 157.0
YYD1_k127_4048935_14 Chorismate mutase type II K03856,K04092,K04093,K04516,K13853 - 2.5.1.54,5.4.99.5 0.0000000000000000006716 94.0
YYD1_k127_4048935_15 PIN domain - - - 0.00000004649 61.0
YYD1_k127_4048935_16 - - - - 0.000002001 60.0
YYD1_k127_4048935_2 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 463.0
YYD1_k127_4048935_3 alginic acid biosynthetic process K01729 - 4.2.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 433.0
YYD1_k127_4048935_4 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 418.0
YYD1_k127_4048935_5 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005301 398.0
YYD1_k127_4048935_6 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007968 347.0
YYD1_k127_4048935_7 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 297.0
YYD1_k127_4048935_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002251 278.0
YYD1_k127_4048935_9 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000009383 271.0
YYD1_k127_4072034_0 UvrD REP helicase K03657,K16898 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000001415 278.0
YYD1_k127_4072034_1 COG3857 ATP-dependent nuclease, subunit B K16899 - 3.6.4.12 0.0000000000000000000000000000000008212 152.0
YYD1_k127_4072034_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00007181 52.0
YYD1_k127_4072034_3 - - - - 0.0001317 49.0
YYD1_k127_4077986_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 421.0
YYD1_k127_4077986_1 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000455 224.0
YYD1_k127_4077986_2 spore germination - - - 0.00000000000000000000000000000000000000000000000000000000007269 216.0
YYD1_k127_4077986_3 - - - - 0.0000001274 62.0
YYD1_k127_4077986_4 Astacin (Peptidase family M12A) - - - 0.0000005474 60.0
YYD1_k127_4077986_5 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07712 - - 0.0000131 56.0
YYD1_k127_40997_0 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 389.0
YYD1_k127_40997_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 381.0
YYD1_k127_40997_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000001371 134.0
YYD1_k127_40997_3 - - - - 0.000000000000000000000000271 108.0
YYD1_k127_40997_4 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00005495 48.0
YYD1_k127_41017_0 5TM C-terminal transporter carbon starvation CstA K06200 - - 6.453e-291 906.0
YYD1_k127_41017_1 PIN domain - - - 0.00000000000000000000000000000000000000000000003801 175.0
YYD1_k127_41017_2 SMP-30/Gluconolaconase/LRE-like region K01053,K13735 - 3.1.1.17 0.0000000000000000000000000000000000001737 147.0
YYD1_k127_41017_4 methyltransferase - - - 0.000000002824 57.0
YYD1_k127_410550_0 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.000000000000000000000000000000000000429 162.0
YYD1_k127_410550_1 TPR repeat - - - 0.00006791 54.0
YYD1_k127_4107067_0 Peptidoglycan-binding domain 1 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008316 301.0
YYD1_k127_4107067_1 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.000000000000000000000000000000000000104 163.0
YYD1_k127_4107067_2 negative regulation of translational initiation - - - 0.0000000000000000189 87.0
YYD1_k127_4107067_3 Methyltransferase - - - 0.000000002875 59.0
YYD1_k127_4109503_0 Peptidase family S41 - - - 1.319e-259 822.0
YYD1_k127_4109503_1 Belongs to the sigma-70 factor family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 535.0
YYD1_k127_4109503_2 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004993 290.0
YYD1_k127_4109503_3 - - - - 0.000000000000000000000000000000000000000000000000000448 196.0
YYD1_k127_4109503_4 DNA-templated transcription, initiation K03088 - - 0.000005064 59.0
YYD1_k127_4120898_0 Glycosyl hydrolase 36 superfamily, catalytic domain K00702,K13688 - 2.4.1.20 0.0 2237.0
YYD1_k127_4122416_0 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 617.0
YYD1_k127_4122416_1 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 333.0
YYD1_k127_4122416_2 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001932 263.0
YYD1_k127_4122416_3 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000000000001456 198.0
YYD1_k127_4122416_4 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000008263 198.0
YYD1_k127_4122416_5 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000008207 126.0
YYD1_k127_4122416_6 - - - - 0.00000000000000000000000000004981 130.0
YYD1_k127_4122416_7 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000003997 105.0
YYD1_k127_4122416_8 Putative zinc-finger - - - 0.000000000000000000000003419 111.0
YYD1_k127_4125817_0 ADP binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006431 270.0
YYD1_k127_4125817_1 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000001324 201.0
YYD1_k127_4125817_2 cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.0000000000000008131 87.0
YYD1_k127_4125817_4 PFAM DinB family protein - - - 0.00000000004635 69.0
YYD1_k127_4125817_5 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.00004911 54.0
YYD1_k127_4158387_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1172.0
YYD1_k127_4158387_1 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005922 283.0
YYD1_k127_4158387_2 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000006934 240.0
YYD1_k127_4158387_3 - - - - 0.000000000000000000000000000005817 134.0
YYD1_k127_4158387_4 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000001073 100.0
YYD1_k127_4158387_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000001765 71.0
YYD1_k127_4158387_6 - - - - 0.000001337 61.0
YYD1_k127_4164518_0 Insulinase (Peptidase family M16) K07263 - - 8.294e-212 691.0
YYD1_k127_4164518_1 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 499.0
YYD1_k127_4164518_2 phosphorelay signal transduction system K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 509.0
YYD1_k127_4164518_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K20974 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004938 464.0
YYD1_k127_4164518_4 Glycosyl hydrolase 36 superfamily, catalytic domain K00702,K13688 - 2.4.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 295.0
YYD1_k127_4171042_0 phosphoenolpyruvate carboxykinase (ATP) activity K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 9.776e-226 711.0
YYD1_k127_4171042_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 554.0
YYD1_k127_4171042_2 LytB protein K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 431.0
YYD1_k127_4171042_3 Cell division ATP-binding protein ftsE K09811,K09812 GO:0000166,GO:0000287,GO:0000910,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007049,GO:0008144,GO:0008150,GO:0008356,GO:0009898,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019897,GO:0019898,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0030145,GO:0030554,GO:0031234,GO:0032153,GO:0032506,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042173,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043937,GO:0043938,GO:0044085,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0046677,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1902531 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001617 260.0
YYD1_k127_4171042_4 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000002282 218.0
YYD1_k127_4171042_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000004364 184.0
YYD1_k127_4171042_6 MOFRL family K11529 - 2.7.1.165 0.00000000000000000000000000000000000001587 158.0
YYD1_k127_4171042_7 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811,K09812 GO:0000910,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006928,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0008356,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009966,GO:0009987,GO:0010033,GO:0010646,GO:0016020,GO:0016021,GO:0016043,GO:0019221,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0030312,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0032153,GO:0032506,GO:0034097,GO:0040007,GO:0040011,GO:0042173,GO:0042221,GO:0043207,GO:0043937,GO:0043938,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070098,GO:0070297,GO:0070887,GO:0071310,GO:0071345,GO:0071840,GO:0071944,GO:0071976,GO:0090529,GO:1902531 - 0.000000000000000000000000000001141 133.0
YYD1_k127_4171042_8 DNA-templated transcription, initiation K03088 - - 0.0000000000000000001404 98.0
YYD1_k127_4171042_9 Heavy-metal resistance - - - 0.000000002486 64.0
YYD1_k127_4213000_0 repeat protein - - - 1.549e-210 672.0
YYD1_k127_4213000_1 PQQ enzyme repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 486.0
YYD1_k127_4213000_2 Domain of unknown function (DUF305) - - - 0.000000000000000000000000000000000000000000000000001306 191.0
YYD1_k127_422000_0 Amidase K01426 - 3.5.1.4 3.481e-222 706.0
YYD1_k127_422000_1 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 466.0
YYD1_k127_422000_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003771 275.0
YYD1_k127_422000_3 von Willebrand factor, type A - - - 0.00000000000000000000000000000001817 138.0
YYD1_k127_422000_4 Frataxin-like domain K06202 - - 0.00000000000000000000288 97.0
YYD1_k127_4221156_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000084 579.0
YYD1_k127_4221156_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620,K00930 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35,2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 344.0
YYD1_k127_4221156_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008159 293.0
YYD1_k127_4221156_3 Belongs to the UPF0271 (lamB) family K07160 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002279 272.0
YYD1_k127_4221156_4 PFAM Acetyltransferase (GNAT) family K00619 - 2.3.1.1 0.000000000004838 70.0
YYD1_k127_4241593_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 406.0
YYD1_k127_4241593_1 Glutamine cyclotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 300.0
YYD1_k127_4241593_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000000005554 200.0
YYD1_k127_4241593_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000000000866 196.0
YYD1_k127_4241593_4 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000000000000000001826 186.0
YYD1_k127_4241593_5 Glycosyl transferase, family 9 K02843,K02849 - - 0.00000000000000000000000000000000000000000000000006039 191.0
YYD1_k127_4241593_6 Tetratricopeptide repeat K11935 - - 0.000000000000000000000000000000006388 145.0
YYD1_k127_4241593_7 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000000133 100.0
YYD1_k127_4241593_8 Trm112p-like protein K00912,K09791 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.7.1.130 0.00000000000000001188 83.0
YYD1_k127_4241593_9 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000000003766 78.0
YYD1_k127_4248249_0 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 328.0
YYD1_k127_4248249_1 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 303.0
YYD1_k127_4248249_2 component I K01665,K03342,K13950 - 2.6.1.85,4.1.3.38 0.0000000000000000000000000000000000000000000000000113 186.0
YYD1_k127_4248249_3 Uncharacterised ArCR, COG2043 - - - 0.0000000000000000000000000000000000000004848 157.0
YYD1_k127_4248249_4 SMART ATP-binding region ATPase domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein K07644 - 2.7.13.3 0.0000000000000000000000000000000000000367 154.0
YYD1_k127_4248249_5 ANTAR K01719 - 4.2.1.75 0.0000001056 53.0
YYD1_k127_4250471_0 MacB-like periplasmic core domain - - - 1.602e-279 885.0
YYD1_k127_4250471_1 Peptidase M56, BlaR1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 349.0
YYD1_k127_4250471_2 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000000000000001662 159.0
YYD1_k127_4250471_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000007167 85.0
YYD1_k127_4258672_0 DNA topological change - - - 1.809e-249 796.0
YYD1_k127_4258672_1 Metallo-beta-lactamase superfamily - - - 1.246e-200 636.0
YYD1_k127_4258672_10 Ankyrin repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 370.0
YYD1_k127_4258672_11 HpcH/HpaI aldolase/citrate lyase family K08691 - 4.1.3.24,4.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006432 324.0
YYD1_k127_4258672_12 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000142 273.0
YYD1_k127_4258672_13 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002543 252.0
YYD1_k127_4258672_14 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000006165 224.0
YYD1_k127_4258672_15 - - - - 0.00000000000000000000000000000000000000001018 170.0
YYD1_k127_4258672_16 - - - - 0.00000000000000000000000000000000000001524 158.0
YYD1_k127_4258672_17 Cupin domain - - - 0.00000000000000000005984 95.0
YYD1_k127_4258672_18 - - - - 0.000000000000000002485 95.0
YYD1_k127_4258672_19 Cytochrome c - - - 0.00000000000000001379 97.0
YYD1_k127_4258672_2 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 606.0
YYD1_k127_4258672_20 - - - - 0.0000000000000000517 92.0
YYD1_k127_4258672_21 Response regulator receiver K07696 - - 0.0000000000007559 69.0
YYD1_k127_4258672_3 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 579.0
YYD1_k127_4258672_4 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004833 537.0
YYD1_k127_4258672_5 MmgE PrpD family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 531.0
YYD1_k127_4258672_6 PQQ-like domain K00114 - 1.1.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 511.0
YYD1_k127_4258672_7 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004564 473.0
YYD1_k127_4258672_8 Transporter, DASS family K11106,K14445 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003214 473.0
YYD1_k127_4258672_9 PFAM Glucose Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006263 383.0
YYD1_k127_42699_0 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 3.309e-224 704.0
YYD1_k127_42699_1 PQQ-like domain K00117 - 1.1.5.2 1.231e-210 677.0
YYD1_k127_42699_2 PFAM TonB-dependent Receptor Plug Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 522.0
YYD1_k127_42699_3 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 483.0
YYD1_k127_42699_4 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004259 284.0
YYD1_k127_42699_5 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002934 283.0
YYD1_k127_42699_6 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000004087 265.0
YYD1_k127_42699_7 PFAM isocitrate isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.000000002118 62.0
YYD1_k127_4270779_0 PAS domain K00575,K13924 - 2.1.1.80,3.1.1.61 1.389e-198 642.0
YYD1_k127_4270779_1 membrane - - - 0.00000000000000000000000000000394 133.0
YYD1_k127_4270779_2 phospholipase Carboxylesterase - - - 0.0000000000000000000000000001203 126.0
YYD1_k127_4270779_3 PFAM Transglycosylase-associated protein - - - 0.00000000000000000000000003902 110.0
YYD1_k127_4270779_4 - - - - 0.0000000000000000000000006455 115.0
YYD1_k127_4270779_5 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0000000000000000000007301 112.0
YYD1_k127_427465_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007861 349.0
YYD1_k127_427465_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000185 245.0
YYD1_k127_427465_2 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000001865 205.0
YYD1_k127_427465_3 transcriptional regulator PadR family - - - 0.000000000000000000000000000000000000000000000001905 175.0
YYD1_k127_427465_4 Bacterial transcriptional activator domain - - - 0.0007114 47.0
YYD1_k127_4284888_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004447 394.0
YYD1_k127_4284888_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005585 319.0
YYD1_k127_4284888_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000002524 170.0
YYD1_k127_4284888_11 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000000000000000000000000000000000000006069 152.0
YYD1_k127_4284888_12 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000001051 147.0
YYD1_k127_4284888_13 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000000008202 121.0
YYD1_k127_4284888_14 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000004204 109.0
YYD1_k127_4284888_15 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000002057 106.0
YYD1_k127_4284888_16 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000007303 105.0
YYD1_k127_4284888_17 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000253 93.0
YYD1_k127_4284888_18 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000009109 93.0
YYD1_k127_4284888_19 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.0000000086 61.0
YYD1_k127_4284888_2 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002647 270.0
YYD1_k127_4284888_3 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006772 267.0
YYD1_k127_4284888_4 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000000000000381 228.0
YYD1_k127_4284888_5 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000005716 218.0
YYD1_k127_4284888_6 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000004838 200.0
YYD1_k127_4284888_7 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000002995 192.0
YYD1_k127_4284888_8 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.000000000000000000000000000000000000000000000000000008608 205.0
YYD1_k127_4284888_9 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000000000001737 187.0
YYD1_k127_4287101_0 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 514.0
YYD1_k127_4287101_1 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000014 116.0
YYD1_k127_4300387_0 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 339.0
YYD1_k127_4300387_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002104 294.0
YYD1_k127_4300387_2 Calcium/calmodulin dependent protein kinase II association domain - - - 0.0000000000000000000000000000001114 136.0
YYD1_k127_4300387_4 - - - - 0.0000000000000004545 90.0
YYD1_k127_4300387_5 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000001202 65.0
YYD1_k127_4300387_6 - - - - 0.0000000006594 68.0
YYD1_k127_4300387_7 - - - - 0.000003916 59.0
YYD1_k127_4317573_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 542.0
YYD1_k127_4317573_1 XdhC Rossmann domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 321.0
YYD1_k127_4317573_2 NifU-like N terminal domain K04488 - - 0.00000000000000000000000000000000000000006504 158.0
YYD1_k127_4317573_4 Colicin V production protein - - - 0.000002667 54.0
YYD1_k127_433448_0 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000782 361.0
YYD1_k127_433448_1 decarboxylase K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000000000007188 203.0
YYD1_k127_433448_2 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000002199 188.0
YYD1_k127_433448_3 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019222,GO:0019439,GO:0034353,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.000000000000000000000000000000000000000001919 160.0
YYD1_k127_4337271_0 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000007198 192.0
YYD1_k127_4337271_1 Amidohydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000003236 177.0
YYD1_k127_4337271_2 Outer membrane protein beta-barrel family K16087,K16092 - - 0.000000000000000000000000000000000002203 159.0
YYD1_k127_4337271_3 PFAM multicopper oxidase type K08100 - 1.3.3.5 0.00000000000000000000000000000005882 146.0
YYD1_k127_4337271_4 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000005202 124.0
YYD1_k127_4343396_0 PQQ-like domain K00114 - 1.1.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 501.0
YYD1_k127_4343396_1 Pyrrolo-quinoline quinone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005602 283.0
YYD1_k127_4343396_10 lactoylglutathione lyase activity - - - 0.0001261 51.0
YYD1_k127_4343396_2 PFAM RNA binding S1 domain protein K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002203 280.0
YYD1_k127_4343396_3 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K03790,K03825,K06718 GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031248,GO:0031365,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564,GO:1902493,GO:1902494,GO:1990234 2.3.1.128,2.3.1.178 0.0000000000000000000000000000000000000000000000000000000000000000000000001731 255.0
YYD1_k127_4343396_4 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000004755 222.0
YYD1_k127_4343396_5 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000002995 190.0
YYD1_k127_4343396_6 Two component transcriptional regulator, winged helix family K02483 - - 0.000000000000000000000000000000001132 141.0
YYD1_k127_4343396_7 Cytochrome c - - - 0.0000000000000000000000003083 115.0
YYD1_k127_4343396_8 Phosphoesterase PA-phosphatase - - - 0.0000000000000000000005754 109.0
YYD1_k127_4343396_9 - - - - 0.000000000000623 73.0
YYD1_k127_4345334_0 peptidoglycan glycosyltransferase activity K03588,K05364,K05837 GO:0002682,GO:0002684,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009605,GO:0009607,GO:0009987,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051301,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0075136 - 2.106e-236 762.0
YYD1_k127_4345334_1 histone H2A K63-linked ubiquitination K02283 - - 0.00000000000000000000000000000000001744 145.0
YYD1_k127_4346440_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 546.0
YYD1_k127_4346440_1 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004152 268.0
YYD1_k127_4346440_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000718 153.0
YYD1_k127_4346440_3 4Fe-4S dicluster domain K05524 - - 0.0000000000000000000000000000000000009482 143.0
YYD1_k127_4346440_4 GAF domain - - - 0.000000000000000000000000000000000005623 156.0
YYD1_k127_4346440_5 cell redox homeostasis K02199 - - 0.00000000000000000000000704 111.0
YYD1_k127_4346440_6 Aspartyl protease - - - 0.0000009884 61.0
YYD1_k127_4346440_7 Putative zinc-finger - - - 0.0001065 53.0
YYD1_k127_4347880_0 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 525.0
YYD1_k127_4347880_1 Uncharacterized conserved protein (DUF2277) - - - 0.0000000000000000000000000000005833 127.0
YYD1_k127_4347880_2 Transcriptional regulator PadR-like family - - - 0.0000000000000001617 80.0
YYD1_k127_4347880_3 - - - - 0.000885 46.0
YYD1_k127_4358269_0 methyltransferase - - - 0.00000000000000000000000000000000000003774 152.0
YYD1_k127_4358269_1 TonB-dependent receptor - - - 0.000000000000000000000000000000005786 149.0
YYD1_k127_4360210_0 signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 369.0
YYD1_k127_4360210_1 - - - - 0.00000000000000000000000000000000000000000002158 169.0
YYD1_k127_4360210_2 metal-dependent hydrolase with the TIM-barrel fold - - - 0.000000000000000000002793 99.0
YYD1_k127_4360210_3 - - - - 0.00000000000000000002022 105.0
YYD1_k127_4360238_0 PQQ-like domain K05889 - 1.1.2.6 5.125e-196 628.0
YYD1_k127_4360238_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 400.0
YYD1_k127_4360238_10 Glycosyl hydrolases family 16 - - - 0.000000214 55.0
YYD1_k127_4360238_2 alginic acid biosynthetic process K01795 - 5.1.3.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 351.0
YYD1_k127_4360238_3 metallophosphoesterase K07096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 332.0
YYD1_k127_4360238_4 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004628 323.0
YYD1_k127_4360238_5 amino acid-binding ACT domain protein K04518 - 4.2.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 288.0
YYD1_k127_4360238_6 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003153 296.0
YYD1_k127_4360238_7 Nucleotidyl transferase of unknown function (DUF2204) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004522 271.0
YYD1_k127_4360238_8 Cytochrome P460 - - - 0.00000000000000000000000000000000000000000000000001795 185.0
YYD1_k127_4360238_9 Nodulation protein S (NodS) - - - 0.00000000000000000000000000000000000000003124 169.0
YYD1_k127_4360825_0 efflux transmembrane transporter activity - - - 2.795e-292 919.0
YYD1_k127_4360825_1 Phenylalanine-4-hydroxylase K00500 GO:0003674,GO:0003824,GO:0004497,GO:0004505,GO:0006082,GO:0006520,GO:0006558,GO:0006559,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016491,GO:0016705,GO:0016714,GO:0017144,GO:0019439,GO:0019752,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902221,GO:1902222 1.14.16.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 470.0
YYD1_k127_4360825_2 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006153 300.0
YYD1_k127_4360825_3 PFAM Uncharacterised protein family (UPF0104) K07027 - - 0.000000000000000000000000000000000000000000000000002211 199.0
YYD1_k127_4360825_4 Dolichyl-phosphate-mannose-protein mannosyltransferase K19302 - 3.6.1.27 0.0000000008199 70.0
YYD1_k127_4360825_5 - - - - 0.00000001669 67.0
YYD1_k127_4361137_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 393.0
YYD1_k127_4361137_1 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00850,K00895,K21071 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008443,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0046835,GO:0046872,GO:0047334,GO:0071704,GO:1901135 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 383.0
YYD1_k127_4361137_2 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000005655 239.0
YYD1_k127_4361137_3 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000003905 156.0
YYD1_k127_4361137_4 ATP binding cassette transporter ABC protein K01990 - - 0.000000000000000000002494 103.0
YYD1_k127_4361137_5 photosystem II stabilization K00703,K02237,K02238 - 2.4.1.21 0.00000000000000009056 87.0
YYD1_k127_4372329_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 448.0
YYD1_k127_4372329_1 response to abiotic stimulus K06867 - - 0.0000000000000000000000000000000000000000000000000000000000000001585 238.0
YYD1_k127_4372329_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000002244 151.0
YYD1_k127_4372329_3 Protein of unknown function (DUF3738) - - - 0.0000000000000000000000000000000007121 137.0
YYD1_k127_4372329_4 - - - - 0.000000000155 67.0
YYD1_k127_4372329_5 Domain of unknown function (DUF4382) - - - 0.0000000001882 69.0
YYD1_k127_4372329_6 response to abiotic stimulus K06867 - - 0.000001327 61.0
YYD1_k127_4374998_1 translation initiation factor activity K06996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001207 250.0
YYD1_k127_4374998_2 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.00000000000000000000000000000000000000000000000000000001218 210.0
YYD1_k127_4374998_4 - - - - 0.0000259 53.0
YYD1_k127_4379538_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002896 410.0
YYD1_k127_4379538_1 Peptidoglycan-binding domain 1 protein K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 299.0
YYD1_k127_4379538_2 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000001455 237.0
YYD1_k127_4379538_3 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000001533 158.0
YYD1_k127_4379538_4 An anti-sigma factor for extracytoplasmic function (ECF) sigma factor SigK. ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut extracytoplasmically (site-1 protease, S1P), then within the membrane itself (site-2 protease, S2P, Rip1), while cytoplasmic proteases finish degrading the regulatory protein, liberating the sigma factor - - - 0.0000000000000008322 90.0
YYD1_k127_4393005_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 594.0
YYD1_k127_4393005_1 O-methyltransferase K00588 - 2.1.1.104 0.0000000000000000000000000000000000000000000000000000000000000000001062 234.0
YYD1_k127_4393005_2 TonB-dependent receptor - - - 0.0000000000000000000000000000073 138.0
YYD1_k127_4410453_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001562 281.0
YYD1_k127_4410453_1 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000002035 143.0
YYD1_k127_4410453_2 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000001559 113.0
YYD1_k127_4410453_3 Transcriptional regulatory protein, C terminal - - - 0.00000000000000626 83.0
YYD1_k127_4410453_4 FHA domain K07315 - 3.1.3.3 0.0000000000001311 79.0
YYD1_k127_4410453_5 amidohydrolase - - - 0.000000008569 66.0
YYD1_k127_4417175_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 6.063e-224 724.0
YYD1_k127_4417175_1 Dehydrogenase K00114 - 1.1.2.8 3.739e-214 679.0
YYD1_k127_4417175_10 membrane K11622 - - 0.0000003624 62.0
YYD1_k127_4417175_11 Anti-sigma-K factor rskA - - - 0.000005741 58.0
YYD1_k127_4417175_12 protein kinase activity - - - 0.00001923 57.0
YYD1_k127_4417175_13 Sodium/hydrogen exchanger family - - - 0.0000386 51.0
YYD1_k127_4417175_2 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11103 - - 1.275e-202 638.0
YYD1_k127_4417175_3 PepSY-associated TM region - - - 0.00000000000000000000000000000000000000000000000000000000000000000002126 248.0
YYD1_k127_4417175_4 TonB dependent receptor K02014,K16092 - - 0.000000000000000000000000000000000000000000000000000000000002145 235.0
YYD1_k127_4417175_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000008074 147.0
YYD1_k127_4417175_6 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000808 153.0
YYD1_k127_4417175_7 - - - - 0.0000000000000000000000000000004938 134.0
YYD1_k127_4417175_8 Dehydrogenase K02030,K17760,K19713 - 1.1.9.1,1.8.2.2 0.00000000000004722 84.0
YYD1_k127_4418250_0 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 382.0
YYD1_k127_4418250_1 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001006 280.0
YYD1_k127_4418250_2 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001693 263.0
YYD1_k127_4426473_0 alpha amylase, catalytic region - - - 1.417e-247 775.0
YYD1_k127_4426473_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008621 596.0
YYD1_k127_4426473_2 pyruvate kinase activity K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 462.0
YYD1_k127_4426473_3 Phosphate acetyl/butaryl transferase K00625 - 2.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009193 447.0
YYD1_k127_4426473_4 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 399.0
YYD1_k127_4426473_5 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002471 278.0
YYD1_k127_4426473_6 formate acetyltransferase K00656 - 2.3.1.54 0.0000000000001659 74.0
YYD1_k127_4426473_7 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000801 61.0
YYD1_k127_4426600_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1111.0
YYD1_k127_4426600_1 Pyridoxal phosphate biosynthetic protein PdxA K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.000000000000000000000000000000000000000000000000000000000000000000000000000001909 271.0
YYD1_k127_4426600_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000004489 189.0
YYD1_k127_4426600_3 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008830,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016853,GO:0016854,GO:0016857,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0045226,GO:0046379,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.1.3.13 0.00000000000000000000000000000000000000000000001642 184.0
YYD1_k127_4426600_4 DNA polymerase III K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000002514 174.0
YYD1_k127_4426600_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000001008 178.0
YYD1_k127_4426600_6 Vitamin K-dependent gamma-carboxylase - - - 0.00000000005342 68.0
YYD1_k127_4427263_0 Di-haem cytochrome c peroxidase - - - 9.57e-309 960.0
YYD1_k127_4427263_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003199 616.0
YYD1_k127_4427263_2 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003674 616.0
YYD1_k127_4427263_3 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000002559 182.0
YYD1_k127_4427263_4 Peptidase M56, BlaR1 - - - 0.0001452 49.0
YYD1_k127_4427901_0 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 557.0
YYD1_k127_4427901_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000874 384.0
YYD1_k127_4427901_2 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.0000000000000000000000000000000001547 141.0
YYD1_k127_4427901_3 - - - - 0.00000000132 66.0
YYD1_k127_4428593_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1322.0
YYD1_k127_4428593_1 4 iron, 4 sulfur cluster binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007142 366.0
YYD1_k127_4428593_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009789 370.0
YYD1_k127_4428593_3 nitrite transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003523 297.0
YYD1_k127_4428593_4 oxidoreductase activity, acting on diphenols and related substances as donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000003792 241.0
YYD1_k127_4428593_5 Ethanolamine utilisation protein EutQ - - - 0.000000000000000000000000000003874 123.0
YYD1_k127_4428593_6 bacterial (prokaryotic) histone like domain K03530 - - 0.00000000000000000000000000000764 121.0
YYD1_k127_4428593_7 Transcriptional regulator, Crp Fnr family - - - 0.00000000000000000000000006625 113.0
YYD1_k127_4428593_8 - - - - 0.0000000000000000801 83.0
YYD1_k127_4428593_9 Belongs to the glycosyl hydrolase 28 family - - - 0.0000000104 65.0
YYD1_k127_4470969_0 DEAD DEAH box K03724 - - 0.0 1349.0
YYD1_k127_4470969_1 TIGRFAM SagB-type dehydrogenase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 491.0
YYD1_k127_4471105_0 PFAM Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit K00122 - 1.17.1.9 1.647e-266 831.0
YYD1_k127_4471105_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K22015 - 1.17.1.9,1.17.99.7 2.881e-260 810.0
YYD1_k127_4471105_3 PFAM aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0001125 48.0
YYD1_k127_4476230_0 ABC transporter ATPase permease K06147 - - 2.003e-265 829.0
YYD1_k127_4476230_1 ABC-type multidrug transport system ATPase and permease K06147,K06148 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 421.0
YYD1_k127_4476230_2 ankyrin repeat K15503 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 430.0
YYD1_k127_4476230_3 DNA topological change K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 391.0
YYD1_k127_4477177_0 PFAM methyltransferase - - - 0.000001493 56.0
YYD1_k127_4485260_0 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006633 389.0
YYD1_k127_4485260_1 Predicted membrane protein (DUF2157) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 300.0
YYD1_k127_4485260_2 Molecular chaperone. Has ATPase activity K04079 - - 0.0000000000000000000000000000000000000000000000000000000000001322 214.0
YYD1_k127_4485260_3 PFAM SMP-30 Gluconolaconase LRE-like region K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000003829 180.0
YYD1_k127_4485260_4 - - - - 0.00000000000000000000000001384 117.0
YYD1_k127_4485260_5 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.000000007952 59.0
YYD1_k127_4485260_6 Glyoxalase-like domain - - - 0.0000004022 61.0
YYD1_k127_4485260_7 DinB family - - - 0.0000008644 58.0
YYD1_k127_4493768_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003834 518.0
YYD1_k127_4493768_1 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 482.0
YYD1_k127_4493768_2 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009564 328.0
YYD1_k127_4493768_3 heat shock protein binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 316.0
YYD1_k127_4493768_4 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000001569 226.0
YYD1_k127_4493768_5 PFAM Uncharacterised BCR, COG1649 K05988 - 3.2.1.11 0.0000000000000000001861 102.0
YYD1_k127_4493768_7 ferredoxin-NADP+ reductase activity - - - 0.00003002 48.0
YYD1_k127_4498960_0 Major facilitator superfamily K08167 - - 3.954e-197 631.0
YYD1_k127_4498960_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000617 365.0
YYD1_k127_4498960_2 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000242 212.0
YYD1_k127_4498960_3 Cupin - - - 0.00000000000000000000000008521 113.0
YYD1_k127_4498960_4 pyridoxamine 5-phosphate - - - 0.00000000000000000008179 101.0
YYD1_k127_4498960_5 SnoaL-like domain - - - 0.000000000000000001024 91.0
YYD1_k127_4498960_6 Protein kinase domain K12132 - 2.7.11.1 0.00000001333 61.0
YYD1_k127_4498960_7 helix_turn_helix, Lux Regulon - - - 0.0000004119 54.0
YYD1_k127_4509706_0 Serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000001775 242.0
YYD1_k127_4509706_1 - - - - 0.000000000000000000000000000001389 125.0
YYD1_k127_4509706_2 OmpA family - - - 0.0000000000000000000000000002366 127.0
YYD1_k127_4509706_3 Belongs to the succinate malate CoA ligase beta subunit family K01903 - 6.2.1.5 0.0000001179 61.0
YYD1_k127_4509706_4 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.000004227 56.0
YYD1_k127_452135_0 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005441 543.0
YYD1_k127_452135_1 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 427.0
YYD1_k127_452135_2 electron transfer activity K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 342.0
YYD1_k127_452135_3 Belongs to the ompA family - - - 0.0000000000000000000006472 107.0
YYD1_k127_452135_4 Belongs to the glycosyl hydrolase 43 family - - - 0.00000000000000000001179 99.0
YYD1_k127_452135_5 Carboxypeptidase regulatory-like domain - - - 0.0000000004193 64.0
YYD1_k127_452135_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00003527 55.0
YYD1_k127_4529071_0 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 567.0
YYD1_k127_4529071_1 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 326.0
YYD1_k127_4542515_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 1.229e-244 778.0
YYD1_k127_4542515_1 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 417.0
YYD1_k127_4542515_10 - - - - 0.0000000008333 64.0
YYD1_k127_4542515_11 Putative addiction module component - - - 0.0000006275 54.0
YYD1_k127_4542515_12 CO dehydrogenase flavoprotein C-terminal domain - - - 0.00007002 48.0
YYD1_k127_4542515_13 Domain of unknown function (DUF3291) - - - 0.00008658 49.0
YYD1_k127_4542515_2 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000007387 267.0
YYD1_k127_4542515_3 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001377 255.0
YYD1_k127_4542515_4 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000004718 154.0
YYD1_k127_4542515_5 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000001001 111.0
YYD1_k127_4542515_6 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000003175 93.0
YYD1_k127_4542515_7 Domain of unknown function (DUF3291) - - - 0.00000000000000000001932 92.0
YYD1_k127_4542515_8 Cupin domain - - - 0.000000000000000008435 87.0
YYD1_k127_4542515_9 PFAM plasmid stabilization system - - - 0.00000000009769 66.0
YYD1_k127_4571766_0 TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 597.0
YYD1_k127_4571766_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004351 394.0
YYD1_k127_4571766_2 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 379.0
YYD1_k127_4571766_3 HAD-hyrolase-like K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005694 301.0
YYD1_k127_4571766_4 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000003783 59.0
YYD1_k127_4576328_0 TonB dependent receptor - - - 1.832e-216 698.0
YYD1_k127_4576328_1 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009993 334.0
YYD1_k127_4576328_2 Protein of unknown function (DUF1207) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 313.0
YYD1_k127_4576328_3 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003878 282.0
YYD1_k127_4576328_4 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000007156 180.0
YYD1_k127_4576328_5 Protein of unknown function (DUF2975) - - - 0.00000000000000000000000000000000000000000000001204 178.0
YYD1_k127_4576328_6 - - - - 0.00000000000000000000000000000000000000000003915 164.0
YYD1_k127_4576328_7 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000835 141.0
YYD1_k127_4576328_8 Transcriptional regulator K07727 - - 0.0000000000000000000000000165 115.0
YYD1_k127_4599279_0 Acetoacetyl-CoA synthase K01907 - 6.2.1.16 1.521e-315 985.0
YYD1_k127_4599279_1 Carbohydrate phosphorylase K00688 - 2.4.1.1 5.821e-253 798.0
YYD1_k127_4599279_10 phosphotransferase related to Ser Thr protein kinases K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000005326 223.0
YYD1_k127_4599279_11 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000001043 210.0
YYD1_k127_4599279_12 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000002216 190.0
YYD1_k127_4599279_13 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000001757 146.0
YYD1_k127_4599279_14 Nucleotidyl transferase K00966,K16881 - 2.7.7.13,5.4.2.8 0.000000000000000000000000000000003664 142.0
YYD1_k127_4599279_15 CYTH K05873 - 4.6.1.1 0.00000000000000000000000000001273 125.0
YYD1_k127_4599279_16 - - - - 0.00000000000000000000001924 106.0
YYD1_k127_4599279_18 - - - - 0.0000007778 53.0
YYD1_k127_4599279_19 DoxX-like family - - - 0.00000156 60.0
YYD1_k127_4599279_2 PFAM tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 5.767e-224 702.0
YYD1_k127_4599279_3 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 421.0
YYD1_k127_4599279_4 Catalyzes the sodium-dependent transport of glutamate K03312 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 399.0
YYD1_k127_4599279_5 PFAM peptidase M24 K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 375.0
YYD1_k127_4599279_6 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006827 333.0
YYD1_k127_4599279_7 beta' subunit K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000002576 250.0
YYD1_k127_4599279_8 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000005719 235.0
YYD1_k127_4599279_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001975 237.0
YYD1_k127_4623888_0 Uncharacterised protein family (UPF0182) K09118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 319.0
YYD1_k127_4623888_1 Uncharacterised protein family (UPF0182) K09118 - - 0.00000000000000000000000000000004827 144.0
YYD1_k127_4631166_0 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004813 486.0
YYD1_k127_4631166_1 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 329.0
YYD1_k127_4631166_10 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000003675 63.0
YYD1_k127_4631166_2 extracellular solute-binding protein, family 1 K22003 - 5.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000002339 269.0
YYD1_k127_4631166_3 - - - - 0.000000000000000000000000000000000000000000000000000000005497 211.0
YYD1_k127_4631166_4 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.00000000000000000000000000000000000000000000002974 174.0
YYD1_k127_4631166_5 Protein of unknown function (DUF962) - - - 0.000000000000000000000000000000000000000001266 159.0
YYD1_k127_4631166_6 CHRD domain - - - 0.000000000000000000000000001431 116.0
YYD1_k127_4631166_7 - - - - 0.00000000000000000000001684 106.0
YYD1_k127_4631166_8 - - - - 0.00000002354 62.0
YYD1_k127_4646014_0 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 1.714e-240 760.0
YYD1_k127_4646014_1 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 437.0
YYD1_k127_4646014_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K22015 - 1.17.1.9,1.17.99.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007459 271.0
YYD1_k127_4646014_3 Ferritin-like domain K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000000003036 215.0
YYD1_k127_4646014_4 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000001045 188.0
YYD1_k127_4646014_5 BON domain - - - 0.0000000000000000001077 93.0
YYD1_k127_4646014_6 Cupin 2, conserved barrel domain protein - - - 0.000000000000002996 82.0
YYD1_k127_466124_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 601.0
YYD1_k127_466124_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005322 389.0
YYD1_k127_466124_10 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000001682 136.0
YYD1_k127_466124_11 - - - - 0.000000000000000000000000322 119.0
YYD1_k127_466124_12 GntR family transcriptional regulator K07979 - - 0.00000000000000003861 85.0
YYD1_k127_466124_13 phenazine biosynthesis protein PhzF family K06998 - 5.3.3.17 0.00000000000002071 83.0
YYD1_k127_466124_2 Glucose / Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 350.0
YYD1_k127_466124_3 Belongs to the ABC transporter superfamily K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 346.0
YYD1_k127_466124_4 Maltose acetyltransferase K00661 - 2.3.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 316.0
YYD1_k127_466124_5 PFAM extracellular solute-binding protein family 1 K02027,K10236 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 294.0
YYD1_k127_466124_6 binding-protein-dependent transport systems inner membrane component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002198 267.0
YYD1_k127_466124_7 PFAM binding-protein-dependent transport systems inner membrane component K02025,K10237 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007148 267.0
YYD1_k127_466124_8 protein methyltransferase activity K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000001976 237.0
YYD1_k127_466124_9 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000000199 164.0
YYD1_k127_466896_0 Acetamidase/Formamidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 396.0
YYD1_k127_466896_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 342.0
YYD1_k127_466896_11 Methyltransferase domain - - - 0.0000000000000001323 86.0
YYD1_k127_466896_12 - - - - 0.00000000001045 73.0
YYD1_k127_466896_2 response to heat K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 336.0
YYD1_k127_466896_3 Major Facilitator Superfamily K08177 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008447 339.0
YYD1_k127_466896_4 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002025 284.0
YYD1_k127_466896_5 - - - - 0.00000000000000000000000000000000000000000000000000000000008779 209.0
YYD1_k127_466896_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000001747 165.0
YYD1_k127_466896_7 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000011 174.0
YYD1_k127_466896_8 Phosphoglycerate mutase family K01834 - 5.4.2.11 0.0000000000000000000000000000000000009384 145.0
YYD1_k127_466896_9 - - - - 0.000000000000000000000008863 110.0
YYD1_k127_4673583_0 Belongs to the ClpA ClpB family K03696 - - 3.952e-290 908.0
YYD1_k127_4673583_1 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 430.0
YYD1_k127_4673583_2 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002237 282.0
YYD1_k127_4673583_3 tRNA synthetases class I (E and Q), catalytic domain K01894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005081 276.0
YYD1_k127_4673583_4 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000001818 244.0
YYD1_k127_4673583_5 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0050896,GO:0051087 - 0.0000000000000000000000000000061 121.0
YYD1_k127_4673583_6 RNA recognition motif - - - 0.0000000000000001566 88.0
YYD1_k127_4673583_7 Lysylphosphatidylglycerol synthase TM region - - - 0.00000007179 64.0
YYD1_k127_467436_0 PFAM TonB-dependent Receptor Plug Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 592.0
YYD1_k127_467436_1 GDSL-like Lipase/Acylhydrolase - - - 0.0000000000001217 83.0
YYD1_k127_467436_2 protein involved in outer membrane biogenesis K07289 - - 0.0004737 49.0
YYD1_k127_468233_0 PFAM Glutamyl glutaminyl-tRNA synthetase, class Ic, catalytic K01886 - 6.1.1.18 6.334e-254 794.0
YYD1_k127_468233_1 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006547 505.0
YYD1_k127_468233_2 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 449.0
YYD1_k127_468233_3 - K00262 - 1.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004784 396.0
YYD1_k127_468233_4 PFAM Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003401 338.0
YYD1_k127_468233_5 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 334.0
YYD1_k127_468233_6 PFAM Peptidase M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000003772 247.0
YYD1_k127_468233_7 Protein of unknown function (DUF4246) - - - 0.00000000000000000000001967 101.0
YYD1_k127_468233_8 - - - - 0.0000000000042 76.0
YYD1_k127_468233_9 - - - - 0.0000000003586 66.0
YYD1_k127_4700403_0 efflux transmembrane transporter activity - - - 1.743e-241 771.0
YYD1_k127_4700403_1 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008861 525.0
YYD1_k127_4700403_2 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000001648 120.0
YYD1_k127_4700403_3 DinB superfamily - - - 0.000000000000000000000546 102.0
YYD1_k127_4700403_4 - - - - 0.0000000006479 63.0
YYD1_k127_4700403_5 gluconolactonase K01053 - 3.1.1.17 0.000001582 61.0
YYD1_k127_4710554_0 Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 601.0
YYD1_k127_4710554_1 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 454.0
YYD1_k127_4710554_2 DnaJ central domain K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 428.0
YYD1_k127_4710554_3 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000001927 244.0
YYD1_k127_4710554_4 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000001235 213.0
YYD1_k127_4710554_5 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.000000000000000000000000000000000000007054 151.0
YYD1_k127_4710554_6 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000007595 138.0
YYD1_k127_4710554_7 Selenium-dependent molybdenum hydroxylase system protein, YqeB family K07402 - - 0.0000000009091 61.0
YYD1_k127_4717683_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004138 564.0
YYD1_k127_4717683_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 452.0
YYD1_k127_4717683_2 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 370.0
YYD1_k127_4717683_3 (ABC) transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007478 327.0
YYD1_k127_4717683_4 HlyD family secretion protein - - - 0.00000000000000000000000000000000000000000000000000000008879 200.0
YYD1_k127_4717683_5 Plasmid stabilization system - - - 0.0000000000000000000123 94.0
YYD1_k127_4717683_6 - - - - 0.0000000000000007912 82.0
YYD1_k127_4717920_0 ATPase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005064 389.0
YYD1_k127_4717920_1 Belongs to the GSP D family K02280 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005535 329.0
YYD1_k127_4717920_2 PFAM SAF domain K02279 - - 0.0000000000000000000000000000000000000004374 160.0
YYD1_k127_4717920_3 transferase activity, transferring glycosyl groups K11936,K14666 - - 0.00000000000000000000000000000000002896 150.0
YYD1_k127_4717920_4 Type IV leader peptidase family K02278 - 3.4.23.43 0.0000000000000000000000000004671 123.0
YYD1_k127_4717920_5 PFAM von Willebrand factor type A - - - 0.0000000000000000000000000136 127.0
YYD1_k127_4717920_6 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000007975 70.0
YYD1_k127_4717920_7 TadE-like protein - - - 0.0000002941 62.0
YYD1_k127_4717920_8 PFAM Flp Fap pilin component K02651 - - 0.000004929 52.0
YYD1_k127_4724824_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004304 353.0
YYD1_k127_4724824_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000004753 240.0
YYD1_k127_4724824_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00000000000000000000000000000000000000001669 158.0
YYD1_k127_4724824_3 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 - 1.6.5.3 0.0000000000000000000000000000000000003705 143.0
YYD1_k127_4724824_4 oxidoreductase activity - - - 0.000000000000000000000000000000000009561 153.0
YYD1_k127_472864_0 PFAM Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005269 590.0
YYD1_k127_472864_1 Belongs to the thiolase family K00632 - 2.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 484.0
YYD1_k127_472864_2 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003699 311.0
YYD1_k127_472864_3 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000001918 188.0
YYD1_k127_472864_4 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01838 - 5.4.2.6 0.000000000000000000000000000000000000000000001131 177.0
YYD1_k127_472864_5 transcriptional regulator - - - 0.00000000000000000000000000000000000000000001028 170.0
YYD1_k127_472864_6 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000003381 133.0
YYD1_k127_4743980_0 Gamma-glutamyltranspeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 554.0
YYD1_k127_4743980_1 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009486 462.0
YYD1_k127_4760249_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281 - 1.4.4.2 0.0 1167.0
YYD1_k127_4760249_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1109.0
YYD1_k127_4760249_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008326 571.0
YYD1_k127_4760249_3 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004114 413.0
YYD1_k127_4760249_4 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000005797 223.0
YYD1_k127_4760249_5 Peptidase family M23 - - - 0.0000000000000000000000000000000000001064 154.0
YYD1_k127_4760249_6 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000000000004427 130.0
YYD1_k127_4760249_7 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000009947 63.0
YYD1_k127_4762182_0 Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate K07516 - 1.1.1.35 8.492e-207 664.0
YYD1_k127_4762182_1 Carbamoyl-phosphate synthetase large chain domain protein K01968 - 6.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 514.0
YYD1_k127_4762182_2 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000723 440.0
YYD1_k127_4762182_3 PFAM carboxyl transferase K01969,K15052 - 2.1.3.15,6.4.1.3,6.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004705 395.0
YYD1_k127_4762182_4 Pfam Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 344.0
YYD1_k127_4762182_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 335.0
YYD1_k127_4762182_6 Ferritin-like domain K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000004558 218.0
YYD1_k127_4762182_7 Acetyl propionyl-CoA carboxylase alpha subunit K01968 - 6.4.1.4 0.00000000000006465 79.0
YYD1_k127_4769719_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 624.0
YYD1_k127_4769719_1 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.0000000000000000000000000000000000000000000000008416 182.0
YYD1_k127_4769719_2 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000000008068 176.0
YYD1_k127_4769719_3 - - - - 0.0000000000000000000000000000000000000002483 158.0
YYD1_k127_4769719_4 - K02172 - - 0.000000000000000000000000000000003913 140.0
YYD1_k127_4769719_5 - - - - 0.0000000000000000009176 91.0
YYD1_k127_4774619_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 612.0
YYD1_k127_4774619_1 peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 428.0
YYD1_k127_4774619_2 FMN-dependent dehydrogenase K00104,K16422 - 1.1.3.15,1.1.3.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000559 404.0
YYD1_k127_4774619_3 TIGRFAM PQQ-dependent dehydrogenase, methanol ethanol family K00114 - 1.1.2.8 0.00000000000000000000000000000000000000000000000000000000000000000002077 247.0
YYD1_k127_4774619_4 - - - - 0.0000000000000000000000000000000000000000000000004407 189.0
YYD1_k127_4774619_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000003987 159.0
YYD1_k127_4774619_6 - - - - 0.000000000000000000000000000000000000000006369 158.0
YYD1_k127_4774619_7 Histidine kinase - - - 0.0000000000000000000000000001944 122.0
YYD1_k127_4774619_8 Lipocalin-like domain - - - 0.0002665 52.0
YYD1_k127_48095_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1081.0
YYD1_k127_48095_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000003013 219.0
YYD1_k127_48095_2 methyltransferase - - - 0.000000000000000000000000000000000000007634 149.0
YYD1_k127_48095_3 Aldo/keto reductase family - - - 0.00000004023 61.0
YYD1_k127_482598_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.245e-250 786.0
YYD1_k127_482598_1 PFAM UvrD REP helicase K03657 - 3.6.4.12 1.175e-199 646.0
YYD1_k127_482598_2 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007004 446.0
YYD1_k127_482598_3 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000002909 234.0
YYD1_k127_482598_4 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000001366 85.0
YYD1_k127_4829186_0 Predicted membrane protein (DUF2339) - - - 1.362e-248 811.0
YYD1_k127_4829186_1 PFAM AMP-dependent synthetase and ligase K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 566.0
YYD1_k127_4829186_2 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007045 445.0
YYD1_k127_4829186_3 - - - - 0.0000000000000000000000000000000000000000000000000000001653 198.0
YYD1_k127_4829186_4 - - - - 0.000000000000000000000000000000000000009179 154.0
YYD1_k127_4829186_5 DoxX-like family - - - 0.00000000000000000000000000000000000001711 148.0
YYD1_k127_4829186_6 YCII-related domain - - - 0.00000000000000000000000000001253 123.0
YYD1_k127_4829186_7 Belongs to the 'phage' integrase family - - - 0.0000000000000000000213 94.0
YYD1_k127_4829186_8 Nicotinamide mononucleotide transporter K03811 - - 0.0000000000000000004385 89.0
YYD1_k127_4832619_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008702 400.0
YYD1_k127_4832619_1 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K02479 - - 0.0000000000000000000000000000000000000000000000000000000000001287 220.0
YYD1_k127_4832619_2 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000002534 139.0
YYD1_k127_4832619_3 geranylgeranyl reductase activity K14257 - 1.14.19.49 0.000000000000000006789 87.0
YYD1_k127_4832619_4 - - - - 0.00001482 56.0
YYD1_k127_4832619_5 SnoaL-like domain - - - 0.00006775 53.0
YYD1_k127_4844440_0 PQQ enzyme repeat K00114 - 1.1.2.8 5.772e-199 634.0
YYD1_k127_4844440_1 Response regulator receiver - - - 9.623e-199 628.0
YYD1_k127_4844440_10 peptidyl-tyrosine sulfation - - - 0.000000000000000000000004386 117.0
YYD1_k127_4844440_12 efflux transmembrane transporter activity - - - 0.0000000000000002705 81.0
YYD1_k127_4844440_13 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000003623 66.0
YYD1_k127_4844440_2 Polyphosphate kinase 2 (PPK2) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 603.0
YYD1_k127_4844440_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005783 483.0
YYD1_k127_4844440_4 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 428.0
YYD1_k127_4844440_5 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007204 357.0
YYD1_k127_4844440_6 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 323.0
YYD1_k127_4844440_7 PFAM Cytochrome C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 299.0
YYD1_k127_4844440_8 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000002582 218.0
YYD1_k127_4844440_9 Protein of unknown function (DUF3810) - - - 0.0000000000000000000000000000000007484 144.0
YYD1_k127_4851220_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 452.0
YYD1_k127_4851220_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000005006 255.0
YYD1_k127_4851220_2 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000003211 175.0
YYD1_k127_4851220_3 - - - - 0.000000000000000000000000001389 122.0
YYD1_k127_4851220_4 Domain of unknown function (DUF4136) - - - 0.00000000000000000000000002173 117.0
YYD1_k127_4851220_5 Surface antigen - - - 0.00000000000000000359 98.0
YYD1_k127_4851220_6 Domain of unknown function (DUF4136) - - - 0.0000002589 60.0
YYD1_k127_4876844_0 glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 326.0
YYD1_k127_4876844_1 Di-haem oxidoreductase, putative peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004017 306.0
YYD1_k127_4876844_2 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000001686 85.0
YYD1_k127_4876844_3 AraC family transcriptional regulator - - - 0.00000000008929 71.0
YYD1_k127_4897060_0 SPFH domain-Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 524.0
YYD1_k127_4897060_1 PQQ-like domain K05889 - 1.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 535.0
YYD1_k127_4897060_2 tRNA wobble cytosine modification - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000767 441.0
YYD1_k127_4897060_3 Tannase and feruloyl esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 439.0
YYD1_k127_4897060_4 phosphinothricin N-acetyltransferase activity K03825 - - 0.000000000000000000000000000000000000000000000000000000000000001058 227.0
YYD1_k127_4897060_5 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000000000000000000000001525 204.0
YYD1_k127_4897060_6 Transcription factor zinc-finger - - - 0.000000000000000000000000000000000000000888 156.0
YYD1_k127_4897060_7 YjbR - - - 0.00000000000000000000000000000001144 130.0
YYD1_k127_4897060_8 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000002137 118.0
YYD1_k127_4897060_9 - - - - 0.0000000000000000008024 97.0
YYD1_k127_490232_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007103 564.0
YYD1_k127_490232_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000004217 241.0
YYD1_k127_4906767_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 5.46e-285 885.0
YYD1_k127_4906767_1 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000002853 224.0
YYD1_k127_4906767_2 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000007392 176.0
YYD1_k127_4908203_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916 - 6.3.1.5 8.598e-207 659.0
YYD1_k127_4908203_1 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 567.0
YYD1_k127_4908203_10 ABC-2 type transporter K09690 - - 0.000000000000000000000000000000000000000000000257 183.0
YYD1_k127_4908203_11 Methyltransferase domain - - - 0.00000000000000000000000000000000000001429 157.0
YYD1_k127_4908203_12 Vitamin K-dependent gamma-carboxylase - - - 0.0000001181 54.0
YYD1_k127_4908203_2 Belongs to the DegT DnrJ EryC1 family K02805 - 2.6.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 503.0
YYD1_k127_4908203_3 Glycosyl transferase family 2 K13670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 331.0
YYD1_k127_4908203_4 beta-fructofuranosidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 303.0
YYD1_k127_4908203_5 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000101 281.0
YYD1_k127_4908203_6 Hexapeptide repeat of succinyl-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001673 267.0
YYD1_k127_4908203_7 WbqC-like protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000179 268.0
YYD1_k127_4908203_8 ABC transporter K01990,K09689,K09691 - 3.6.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000001128 269.0
YYD1_k127_4908203_9 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000007865 206.0
YYD1_k127_4909449_0 M61 glycyl aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 554.0
YYD1_k127_4909449_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 353.0
YYD1_k127_4909449_2 2Fe-2S -binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 287.0
YYD1_k127_4909449_3 Ferrochelatase K01772 GO:0003674,GO:0003824,GO:0004325,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0040007,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0046148,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051540,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001723 287.0
YYD1_k127_4909449_4 FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.00000000000000000000000000000000000000000000000000001073 194.0
YYD1_k127_4909449_5 - - - - 0.0000000000000002835 87.0
YYD1_k127_4909449_6 carboxymuconolactone decarboxylase K01607 - 4.1.1.44 0.000000000000009275 83.0
YYD1_k127_4909449_7 xanthine dehydrogenase a b hammerhead K11177 - 1.17.1.4 0.00000000115 60.0
YYD1_k127_4912420_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 6.094e-285 917.0
YYD1_k127_4912420_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.094e-251 786.0
YYD1_k127_4912420_10 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005585 286.0
YYD1_k127_4912420_11 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009957 278.0
YYD1_k127_4912420_12 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000805 261.0
YYD1_k127_4912420_13 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002366 262.0
YYD1_k127_4912420_14 Bacterial regulatory protein, Fis family K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002639 263.0
YYD1_k127_4912420_15 ABC-2 type transporter K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000765 258.0
YYD1_k127_4912420_16 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001595 248.0
YYD1_k127_4912420_17 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000003479 250.0
YYD1_k127_4912420_18 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000005137 246.0
YYD1_k127_4912420_19 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000002308 205.0
YYD1_k127_4912420_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 5.713e-237 743.0
YYD1_k127_4912420_20 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000001271 176.0
YYD1_k127_4912420_21 Transcription termination factor nusG - - - 0.00000000000000000000000000000000002075 143.0
YYD1_k127_4912420_22 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000003123 127.0
YYD1_k127_4912420_23 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000001089 100.0
YYD1_k127_4912420_24 R3H domain protein K06346 - - 0.00000000000000000003374 96.0
YYD1_k127_4912420_25 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000001289 96.0
YYD1_k127_4912420_26 Specifically methylates the N7 position of guanine in position 535 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000005426 96.0
YYD1_k127_4912420_27 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.00000000000005025 83.0
YYD1_k127_4912420_28 PFAM response regulator receiver K02481,K07712 - - 0.0000000000006365 74.0
YYD1_k127_4912420_29 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000009967 76.0
YYD1_k127_4912420_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.381e-226 709.0
YYD1_k127_4912420_30 Ribosomal protein L34 K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000104 70.0
YYD1_k127_4912420_31 Tfp pilus assembly protein pilus retraction ATPase PilT K02669 - - 0.0000000001602 74.0
YYD1_k127_4912420_32 PFAM Stress responsive A B Barrel Domain - - - 0.00002156 51.0
YYD1_k127_4912420_4 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 4.331e-195 626.0
YYD1_k127_4912420_5 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010556,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:1990837,GO:2000112 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 484.0
YYD1_k127_4912420_6 ATPases associated with a variety of cellular activities K01990,K09689,K09691,K09693 - 3.6.3.38,3.6.3.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002295 437.0
YYD1_k127_4912420_7 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 332.0
YYD1_k127_4912420_8 Cellulose biosynthesis protein BcsQ K03496 GO:0008150,GO:0022603,GO:0042173,GO:0042174,GO:0043937,GO:0043939,GO:0045595,GO:0045596,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0065007 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008944 291.0
YYD1_k127_4912420_9 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0031224,GO:0031226,GO:0032940,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051205,GO:0051234,GO:0051259,GO:0051260,GO:0051641,GO:0061024,GO:0065003,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 301.0
YYD1_k127_4915941_0 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009489 550.0
YYD1_k127_4915941_1 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007697 435.0
YYD1_k127_4915941_2 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000001261 183.0
YYD1_k127_4915941_3 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000005881 148.0
YYD1_k127_4915941_4 shape-determining protein MreD K03571 - - 0.0000191 54.0
YYD1_k127_4918001_0 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 584.0
YYD1_k127_4918001_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006635 348.0
YYD1_k127_4918001_2 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 338.0
YYD1_k127_4918001_3 ATPases associated with a variety of cellular activities K05847 GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0031460,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0072337 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007696 293.0
YYD1_k127_4918001_4 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000001367 235.0
YYD1_k127_4918001_5 DinB family - - - 0.0000000000000000000000000000000000000000001829 164.0
YYD1_k127_4918001_6 Domain of unknown function (DUF4160) - - - 0.000000000000000000002363 94.0
YYD1_k127_4918001_7 Protein of unknown function (DUF2442) - - - 0.00000002927 60.0
YYD1_k127_4922459_0 Putative amidoligase enzyme (DUF2126) - - - 5e-324 1010.0
YYD1_k127_4922459_1 Circularly permuted ATP-grasp type 2 - - - 3.27e-228 716.0
YYD1_k127_4922459_2 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 384.0
YYD1_k127_4934573_0 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005736 435.0
YYD1_k127_4934573_1 transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 427.0
YYD1_k127_4934573_2 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000007343 226.0
YYD1_k127_4934573_3 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000000000000001115 207.0
YYD1_k127_4934573_4 Uracil phosphoribosyltransferase K00761 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000001085 212.0
YYD1_k127_4934573_5 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000012 203.0
YYD1_k127_4934573_6 galactose-6-phosphate isomerase activity K00568,K01808 - 2.1.1.222,2.1.1.64,5.3.1.6 0.000000000000000000000000000000000001566 146.0
YYD1_k127_4934573_7 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.0000000000000000000000004877 115.0
YYD1_k127_4934573_8 COG0471 Di- and tricarboxylate transporters - - - 0.00000000000000004548 82.0
YYD1_k127_4934573_9 Intracellular protease K05520 - 3.5.1.124 0.00000000009775 63.0
YYD1_k127_4936461_0 SMART Integrin alpha beta-propellor repeat protein - - - 2.831e-247 814.0
YYD1_k127_4936461_1 Domain of unknown function (DUF5122) beta-propeller K14274,K20276,K21449 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002149 293.0
YYD1_k127_4936461_2 DNA-templated transcription, initiation K02405 - - 0.00000000000000000000000000000000000000000000000008551 184.0
YYD1_k127_4936461_3 amine dehydrogenase activity - - - 0.0001768 56.0
YYD1_k127_4940058_0 NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 301.0
YYD1_k127_4940058_1 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000005614 256.0
YYD1_k127_4940058_2 Methyltransferase domain - - - 0.000000000000000000297 105.0
YYD1_k127_4940058_3 Short-chain dehydrogenase reductase sdr K00065 - 1.1.1.127 0.0000000000000000005292 96.0
YYD1_k127_4940058_4 O-methyltransferase activity - - - 0.00000000001715 79.0
YYD1_k127_4940058_5 Glycosyltransferase like family 2 K20444 - - 0.00000000725 70.0
YYD1_k127_4940058_6 rRNA (guanine-N2-)-methyltransferase activity - - - 0.0002612 52.0
YYD1_k127_4942719_0 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003361 473.0
YYD1_k127_4942719_1 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 351.0
YYD1_k127_4942719_2 protein conserved in bacteria - - - 0.0000005263 59.0
YYD1_k127_4963662_0 PQQ-like domain K00117 - 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 477.0
YYD1_k127_4963662_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 328.0
YYD1_k127_4963662_2 - - - - 0.00000000000000000003651 101.0
YYD1_k127_4963662_3 MacB-like periplasmic core domain - - - 0.000009705 49.0
YYD1_k127_4972763_0 membrane organization K07277,K09800 - - 2.561e-301 983.0
YYD1_k127_4972763_1 - - - - 0.000000007842 63.0
YYD1_k127_4988690_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102,K11103 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 522.0
YYD1_k127_4988690_1 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 391.0
YYD1_k127_4988690_2 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.0000000000000000000000000000000000000000000000000000000009711 214.0
YYD1_k127_4988690_3 PAS fold - - - 0.000000000000000000000000005462 120.0
YYD1_k127_4988690_4 Acetyltransferase (GNAT) domain - - - 0.00000000000000679 86.0
YYD1_k127_4991521_0 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000007544 237.0
YYD1_k127_4991521_1 to glycosidase Bacteriophage 11b gi 53748214 emb CAH56675.1 K03791 - - 0.0000000000000000000000000000000000000000000000000002273 194.0
YYD1_k127_4991521_3 Alpha beta hydrolase fold-3 domain protein - - - 0.00000000000000000000000000000000000003134 149.0
YYD1_k127_4991521_4 - - - - 0.00000000000000003698 91.0
YYD1_k127_4994419_0 MBOAT, membrane-bound O-acyltransferase family K19294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 501.0
YYD1_k127_4994419_1 COG1073 Hydrolases of the alpha beta superfamily K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004884 391.0
YYD1_k127_4994419_2 PFAM amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 346.0
YYD1_k127_4994419_3 Bacterial PH domain K08981 - - 0.0000000000000000000000000000000000000000000000000000000000006273 231.0
YYD1_k127_4994419_4 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000151 198.0
YYD1_k127_4994419_5 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000001746 174.0
YYD1_k127_4994419_6 Bacterial PH domain K09167 - - 0.0000000000000000000008861 101.0
YYD1_k127_4995964_0 Ftsk_gamma K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 576.0
YYD1_k127_4995964_1 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005315 293.0
YYD1_k127_4995964_2 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003991 290.0
YYD1_k127_4995964_3 - K02172 - - 0.0000000000000000000000000000001683 136.0
YYD1_k127_4995964_4 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000004329 128.0
YYD1_k127_4995964_5 PQQ-like domain - - - 0.000000001432 63.0
YYD1_k127_4995964_6 Carboxypeptidase regulatory-like domain - - - 0.00001781 51.0
YYD1_k127_5001032_0 Carboxylesterase family K03929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 330.0
YYD1_k127_5001032_1 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003194 251.0
YYD1_k127_5001032_2 protein histidine kinase activity - - - 0.000000000000000000000000000000000000000000000000000000434 202.0
YYD1_k127_5001032_3 - - - - 0.000000000000000000000000000000000000007236 159.0
YYD1_k127_5001032_5 - - - - 0.000000000000000000000000000005871 126.0
YYD1_k127_5001032_6 - - - - 0.0000000000000000000000008094 118.0
YYD1_k127_5001032_7 - - - - 0.0000004804 57.0
YYD1_k127_5004080_0 ABC transporter C-terminal domain K15738 - - 1.35e-202 647.0
YYD1_k127_5004080_1 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000002504 212.0
YYD1_k127_5004080_3 oxidoreductase activity - - - 0.00004546 57.0
YYD1_k127_5022422_0 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 364.0
YYD1_k127_5022422_1 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001124 243.0
YYD1_k127_5022422_2 Putative restriction endonuclease - - - 0.0000000000000000000000000000000000000000000000000005595 190.0
YYD1_k127_5022422_3 PRMT5 arginine-N-methyltransferase K11434 - 2.1.1.319 0.000000000000000000000000000000000000000000000000002089 196.0
YYD1_k127_5022422_4 HPr kinase - - - 0.000000000000000000000000000000000000000000000000003213 196.0
YYD1_k127_5022422_5 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000001584 164.0
YYD1_k127_5022422_6 PFAM Penicillinase repressor - - - 0.0000000000000000000000000000000000000001446 153.0
YYD1_k127_5022422_7 Antirepressor regulating drug resistance - - - 0.000000008199 65.0
YYD1_k127_5026722_0 Peptidase family M1 domain K01256 - 3.4.11.2 2.385e-255 815.0
YYD1_k127_5026722_1 HD domain - - - 0.00000000000000000000000000000000000000000000009052 188.0
YYD1_k127_5026722_2 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000003297 123.0
YYD1_k127_5041056_0 choline dehydrogenase activity - - - 1.576e-253 790.0
YYD1_k127_5041056_1 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 289.0
YYD1_k127_5041597_0 Polyphosphate kinase 2 (PPK2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 385.0
YYD1_k127_5041597_1 Domain of unknown function (DUF3943) - - - 0.00000000000000000000000000000000000000000000000000000000004801 222.0
YYD1_k127_5041597_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000007704 212.0
YYD1_k127_5041597_3 Periplasmic or secreted lipoprotein - - - 0.000000000000000000000000000004554 125.0
YYD1_k127_5041597_4 histidine kinase A domain protein domain protein - - - 0.000000000000000002946 101.0
YYD1_k127_5041597_5 - - - - 0.00000000000000002749 90.0
YYD1_k127_5041597_6 Outer membrane protein, OMP85 family K07277 - - 0.000000007951 68.0
YYD1_k127_5045709_0 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 4.541e-226 715.0
YYD1_k127_5045709_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 575.0
YYD1_k127_5045709_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 404.0
YYD1_k127_5045709_3 phosphoprotein phosphatase activity K14680 - 6.5.1.3 0.000000000000000000000000714 114.0
YYD1_k127_5045709_4 - - - - 0.000000000000000000000566 104.0
YYD1_k127_5045709_5 - - - - 0.0000003198 59.0
YYD1_k127_5045709_6 ThiS family K03636 - - 0.0000005819 55.0
YYD1_k127_5050397_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000065 451.0
YYD1_k127_5050397_1 nitrogen compound transport K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 367.0
YYD1_k127_5050397_2 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 297.0
YYD1_k127_5050397_3 dithiol-disulfide isomerase involved in polyketide biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000001291 247.0
YYD1_k127_5050397_4 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000005206 207.0
YYD1_k127_5050397_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000008234 133.0
YYD1_k127_5050397_6 SpoIVB peptidase S55 - - - 0.00000000000000000828 90.0
YYD1_k127_5050397_7 PFAM Tetratricopeptide repeat - - - 0.0000000135 66.0
YYD1_k127_5050397_8 Putative zinc-finger - - - 0.000001051 60.0
YYD1_k127_5057762_0 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 311.0
YYD1_k127_5057762_1 HlyD family secretion protein K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 311.0
YYD1_k127_5057762_10 - - - - 0.000003599 55.0
YYD1_k127_5057762_2 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005115 304.0
YYD1_k127_5057762_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 297.0
YYD1_k127_5057762_4 PQQ-like domain K05889 - 1.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000222 219.0
YYD1_k127_5057762_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05825 - - 0.000000000000000000000000000000000000000000000000000002354 194.0
YYD1_k127_5057762_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000003432 143.0
YYD1_k127_5057762_7 - - - - 0.00000000000000000000000000006089 129.0
YYD1_k127_5057762_8 - - - - 0.000000000000000000000005802 114.0
YYD1_k127_5057762_9 metal-dependent phosphoesterases (PHP family) - - - 0.000000000008063 78.0
YYD1_k127_5059745_0 Aldehyde dehydrogenase family K00294 - 1.2.1.88 2.336e-238 747.0
YYD1_k127_5059745_1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 406.0
YYD1_k127_5059745_2 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 334.0
YYD1_k127_5059745_3 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000005692 273.0
YYD1_k127_5059745_4 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001107 253.0
YYD1_k127_507273_0 AcrB/AcrD/AcrF family - - - 2.738e-299 944.0
YYD1_k127_507273_1 Putative zinc-finger K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 304.0
YYD1_k127_507273_2 HlyD family secretion protein - - - 0.00000000000000000000000000000000000000000000000207 190.0
YYD1_k127_507273_3 DsrE/DsrF-like family K09004 - - 0.0000000000000000000000000000000000000006177 154.0
YYD1_k127_507273_4 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000002535 160.0
YYD1_k127_507273_5 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000002527 133.0
YYD1_k127_5079542_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007494 282.0
YYD1_k127_5079542_1 Bacterial transcriptional regulator K13641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002641 249.0
YYD1_k127_5079542_2 Tetratricopeptide repeat - - - 0.00007551 55.0
YYD1_k127_5080906_0 FAD linked oxidase domain protein - - - 1.899e-236 760.0
YYD1_k127_5080906_1 lysine biosynthetic process via aminoadipic acid - - - 3.046e-210 683.0
YYD1_k127_5080906_2 Phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004048 511.0
YYD1_k127_5080906_3 HpcH/HpaI aldolase/citrate lyase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 430.0
YYD1_k127_5080906_4 Formiminotransferase-cyclodeaminase K00603,K01746,K13990 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009227 347.0
YYD1_k127_5080906_5 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000008013 276.0
YYD1_k127_5080906_6 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000008099 187.0
YYD1_k127_5080906_7 23S rRNA-intervening sequence protein - - - 0.00000000000000001285 88.0
YYD1_k127_5082747_0 DNA modification - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 335.0
YYD1_k127_5082747_1 SNF2 family N-terminal domain - - - 0.0000000000000000000000000000000000005574 155.0
YYD1_k127_5082747_2 abc-type fe3 -hydroxamate transport system, periplasmic component - - - 0.00000000000000000000000000000004624 132.0
YYD1_k127_5082747_3 COG0553 Superfamily II DNA RNA helicases, SNF2 family - - - 0.00000000000000000000000001123 126.0
YYD1_k127_5086036_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005786 384.0
YYD1_k127_5086036_1 ABC transporter, ATP-binding protein K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 288.0
YYD1_k127_5086036_2 Putative FMN-binding domain K07734 - - 0.000000000000000000000000000000000000000000000000000000000000000000000358 246.0
YYD1_k127_5086036_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000002271 197.0
YYD1_k127_509825_0 efflux transmembrane transporter activity - - - 2.263e-271 858.0
YYD1_k127_509825_1 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000001439 208.0
YYD1_k127_509825_2 Lipase (class 3) - - - 0.00000000000000000000000000000000000000006109 166.0
YYD1_k127_509825_3 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000002405 79.0
YYD1_k127_509825_4 - - - - 0.00000000003807 72.0
YYD1_k127_5101048_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 534.0
YYD1_k127_5101048_1 Oxidoreductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 455.0
YYD1_k127_5101048_2 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000309 271.0
YYD1_k127_5101048_3 PFAM DGPFAETKE family protein - - - 0.0000000000000000000000000000000000000000005236 159.0
YYD1_k127_510696_0 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 421.0
YYD1_k127_510696_1 PFAM ATPase associated with various cellular activities, AAA_5 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 361.0
YYD1_k127_510696_2 SMART von Willebrand factor, type A K07161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 334.0
YYD1_k127_510696_3 carboxylic ester hydrolase activity K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008627 332.0
YYD1_k127_510696_4 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000000000000000000001363 175.0
YYD1_k127_510696_5 Protein of unknown function (DUF1697) - - - 0.000000000000000000000000000000000002895 151.0
YYD1_k127_510696_6 Polyketide cyclase / dehydrase and lipid transport K09386 - - 0.000000000000000000000000000159 132.0
YYD1_k127_510696_7 Protein of unknown function (DUF1697) - - - 0.0001042 54.0
YYD1_k127_510696_8 Carboxypeptidase regulatory-like domain - - - 0.0001376 54.0
YYD1_k127_5108229_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 9.717e-199 652.0
YYD1_k127_5108229_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000531 378.0
YYD1_k127_5108229_2 Peptidoglycan-binding domain 1 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004212 273.0
YYD1_k127_5108229_3 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000002362 210.0
YYD1_k127_5108229_4 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000000000000000000000000000000000000319 166.0
YYD1_k127_5110578_0 DNA topological change K03168 - 5.99.1.2 8.447e-246 785.0
YYD1_k127_5110578_1 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 377.0
YYD1_k127_5110578_2 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 325.0
YYD1_k127_5110578_3 COG0666 FOG Ankyrin repeat K06867 - - 0.0000000000000000000000000003379 131.0
YYD1_k127_5110578_4 ECF sigma factor K03088 - - 0.0000000000001093 84.0
YYD1_k127_5110578_5 Tetratricopeptide repeat - - - 0.00000001695 68.0
YYD1_k127_5110578_6 Regulatory protein, FmdB family - - - 0.0000001733 57.0
YYD1_k127_5110578_7 SnoaL-like domain - - - 0.00003043 55.0
YYD1_k127_5110723_0 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004408 607.0
YYD1_k127_5110723_1 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001137 271.0
YYD1_k127_5110723_3 - - - - 0.00000000000000000000000000001129 132.0
YYD1_k127_5110723_4 efflux transmembrane transporter activity - - - 0.0000000000003607 70.0
YYD1_k127_5110723_5 Alpha/beta hydrolase family - - - 0.0004874 46.0
YYD1_k127_5123753_0 COG0058 Glucan phosphorylase K00688 - 2.4.1.1 1.582e-294 930.0
YYD1_k127_5123753_1 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 6.113e-285 893.0
YYD1_k127_5123753_10 Carboxypeptidase regulatory-like domain - - - 0.0000009853 51.0
YYD1_k127_5123753_2 Two component regulator propeller K07315,K12132,K13924 - 2.1.1.80,2.7.11.1,3.1.1.61,3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009207 621.0
YYD1_k127_5123753_3 Dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 616.0
YYD1_k127_5123753_4 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 508.0
YYD1_k127_5123753_5 abc transporter atp-binding protein K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000315 263.0
YYD1_k127_5123753_6 Phosphoribosyl transferase domain K00762 - 2.4.2.10 0.0000000000000000000000000000000000000006372 158.0
YYD1_k127_5123753_7 domain protein K14194 - - 0.000000000000000000000000000009869 138.0
YYD1_k127_5123753_8 DinB superfamily - - - 0.000000000000001154 83.0
YYD1_k127_5123753_9 COG2335, Secreted and surface protein containing fasciclin-like repeats - - - 0.000000007619 67.0
YYD1_k127_5124533_0 Cytochrome c-type biogenesis protein K02198 - - 8.379e-195 628.0
YYD1_k127_5124533_1 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.000000000000000000000000000000000000000000000000000000000291 213.0
YYD1_k127_5124533_2 Cytochrome C assembly protein K02195 - - 0.0000000000000000000000000000000000000000000003542 174.0
YYD1_k127_5124533_3 PFAM ABC transporter K01990,K02193,K09697 - 3.6.3.41,3.6.3.7 0.000000000000000000000000000000000000000008511 165.0
YYD1_k127_5124533_6 - - - - 0.00001492 55.0
YYD1_k127_5126797_0 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000005539 244.0
YYD1_k127_5126797_1 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000004367 186.0
YYD1_k127_5126797_2 von Willebrand factor, type A - - - 0.000000000000007349 85.0
YYD1_k127_5126797_3 Iron-sulfur cluster-binding domain - - - 0.0003572 53.0
YYD1_k127_5140641_0 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 600.0
YYD1_k127_5140641_1 PFAM Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 520.0
YYD1_k127_5140641_2 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 450.0
YYD1_k127_5140641_3 pfkB family carbohydrate kinase K18478 - 2.7.1.184 0.00000000000000000000000000000000000000000000000007576 189.0
YYD1_k127_5140641_4 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000005559 133.0
YYD1_k127_5140641_5 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000006249 59.0
YYD1_k127_5154061_0 Trehalose utilisation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000848 395.0
YYD1_k127_5154061_1 - - - - 0.000000000000000000000000000000000000000008154 162.0
YYD1_k127_5154061_2 Putative inner membrane exporter, YdcZ K09936 - - 0.00000000000000000000000005042 116.0
YYD1_k127_5154061_3 - - - - 0.0000000000000000000000007207 108.0
YYD1_k127_5178952_0 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 460.0
YYD1_k127_5178952_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007259 357.0
YYD1_k127_5178952_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000004287 83.0
YYD1_k127_5178952_11 - - - - 0.00000008736 62.0
YYD1_k127_5178952_2 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008231 322.0
YYD1_k127_5178952_3 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001218 293.0
YYD1_k127_5178952_4 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000001009 232.0
YYD1_k127_5178952_5 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.00000000000000000000000000000000000000000000000000000004337 205.0
YYD1_k127_5178952_6 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000004998 203.0
YYD1_k127_5178952_7 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000007261 108.0
YYD1_k127_5178952_8 PFAM Dienelactone hydrolase K01061 - 3.1.1.45 0.00000000000000000000001057 111.0
YYD1_k127_5178952_9 - - - - 0.00000000000000001369 85.0
YYD1_k127_5187160_0 PFAM peptidase S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 388.0
YYD1_k127_5187160_1 peptidyl-prolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 326.0
YYD1_k127_5187160_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000006002 233.0
YYD1_k127_5187160_3 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000001219 185.0
YYD1_k127_5187160_4 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.000000000000000000000000000000000000000009901 155.0
YYD1_k127_5187160_5 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.000000000000000002234 85.0
YYD1_k127_5187160_6 Protein conserved in bacteria - - - 0.000001555 61.0
YYD1_k127_5205774_0 efflux transmembrane transporter activity - - - 1.793e-308 965.0
YYD1_k127_5205774_1 MacB-like periplasmic core domain - - - 1.116e-229 740.0
YYD1_k127_5205774_10 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003645 385.0
YYD1_k127_5205774_11 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 402.0
YYD1_k127_5205774_12 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 365.0
YYD1_k127_5205774_13 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007023 336.0
YYD1_k127_5205774_14 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 304.0
YYD1_k127_5205774_15 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008843 280.0
YYD1_k127_5205774_16 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000006463 237.0
YYD1_k127_5205774_17 Conserved domain frequently associated with peptide methionine sulfoxide reductase K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000004422 216.0
YYD1_k127_5205774_18 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000001181 216.0
YYD1_k127_5205774_19 Belongs to the UPF0403 family - - - 0.00000000000000000000000000000000000000000004763 165.0
YYD1_k127_5205774_2 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003983 564.0
YYD1_k127_5205774_20 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000000000000009454 155.0
YYD1_k127_5205774_21 Protein of unknown function DUF45 - - - 0.000000000000000000000000000000000001129 148.0
YYD1_k127_5205774_22 Regulatory protein, FmdB family - - - 0.0000000006944 63.0
YYD1_k127_5205774_3 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 526.0
YYD1_k127_5205774_4 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 512.0
YYD1_k127_5205774_5 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 478.0
YYD1_k127_5205774_6 Radical SAM superfamily K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 450.0
YYD1_k127_5205774_7 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 433.0
YYD1_k127_5205774_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008609 423.0
YYD1_k127_5205774_9 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008536 441.0
YYD1_k127_52089_0 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008623 440.0
YYD1_k127_52089_1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K07516 - 1.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000005868 250.0
YYD1_k127_52089_2 ABC transporter K02049 - - 0.000000000000000000000000000000000000000000000000000000001629 220.0
YYD1_k127_52089_3 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000341 199.0
YYD1_k127_52089_4 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000001304 149.0
YYD1_k127_52089_5 hydrolase activity, acting on ester bonds K01563 - 3.8.1.5 0.0000000000004003 79.0
YYD1_k127_52089_7 - - - - 0.00000002468 65.0
YYD1_k127_52089_8 von willebrand factor type a - - - 0.0009869 50.0
YYD1_k127_5223128_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 4.367e-319 990.0
YYD1_k127_5223128_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005081 340.0
YYD1_k127_5223128_2 Cytochrome b(C-terminal)/b6/petD K00412 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 333.0
YYD1_k127_5223128_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000295 224.0
YYD1_k127_5223128_4 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000006389 218.0
YYD1_k127_5232064_0 WD40-like Beta Propeller Repeat - - - 1.214e-222 726.0
YYD1_k127_5232064_1 PFAM Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007583 489.0
YYD1_k127_5232064_10 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.0000002418 56.0
YYD1_k127_5232064_11 SnoaL-like polyketide cyclase - - - 0.0000002958 60.0
YYD1_k127_5232064_2 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 464.0
YYD1_k127_5232064_3 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 340.0
YYD1_k127_5232064_4 Laminin G domain - - - 0.000000000000000000000000000000000000006668 165.0
YYD1_k127_5232064_5 - - - - 0.0000000000000000000000000000000002037 138.0
YYD1_k127_5232064_6 DinB superfamily - - - 0.00000000000000000000000007559 114.0
YYD1_k127_5232064_7 Involved in the TonB-independent uptake of proteins K03641 - - 0.0000000000002184 83.0
YYD1_k127_5232064_8 Protein of unknown function (DUF3738) - - - 0.0000000000002819 74.0
YYD1_k127_5232064_9 - - - - 0.00000001263 66.0
YYD1_k127_5236566_0 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031420,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 578.0
YYD1_k127_5236566_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 - 3.6.3.12 0.0000000000000000000000000000000000007085 145.0
YYD1_k127_5236770_0 4Fe-4S dicluster domain K00184 - - 0.0 1155.0
YYD1_k127_5236770_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 5.835e-252 787.0
YYD1_k127_5236770_10 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000000000000000000000000000000000005479 221.0
YYD1_k127_5236770_11 ABC transporter substrate-binding protein K02035 - - 0.00000000000000000000000001316 115.0
YYD1_k127_5236770_12 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000006871 98.0
YYD1_k127_5236770_13 TIGRFAM Caa(3)-type oxidase, subunit IV K02277 - 1.9.3.1 0.00000000000000003192 87.0
YYD1_k127_5236770_14 - - - - 0.000000000083 73.0
YYD1_k127_5236770_15 PFAM Alcohol dehydrogenase - - - 0.00000001377 61.0
YYD1_k127_5236770_2 Polysulphide reductase, NrfD K00185 - - 1.552e-211 666.0
YYD1_k127_5236770_3 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009354 427.0
YYD1_k127_5236770_4 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 394.0
YYD1_k127_5236770_5 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004526 372.0
YYD1_k127_5236770_6 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003973 306.0
YYD1_k127_5236770_7 signal sequence binding K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001205 265.0
YYD1_k127_5236770_8 PFAM cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000002352 259.0
YYD1_k127_5236770_9 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000001577 238.0
YYD1_k127_5240069_0 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004117 554.0
YYD1_k127_5240069_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 476.0
YYD1_k127_5240069_10 Phosphorylase superfamily - - - 0.00000000000000000000000000000000000000000000000000001434 197.0
YYD1_k127_5240069_11 Diphthamide synthase - - - 0.0000000000000000000000000000000000000000000002494 177.0
YYD1_k127_5240069_12 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.000000000000000000000000000000000000000000003554 168.0
YYD1_k127_5240069_13 PFAM heat shock protein DnaJ K04082 - - 0.0000000000000000000000000000000001897 142.0
YYD1_k127_5240069_14 Periplasmic binding protein K02016 - - 0.00000000000000000000000000000004333 139.0
YYD1_k127_5240069_15 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000001634 127.0
YYD1_k127_5240069_16 FeS assembly protein IscX - - - 0.000000000000000000002608 94.0
YYD1_k127_5240069_2 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K11779,K11784,K18285 - 1.21.98.1,2.5.1.120,2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 466.0
YYD1_k127_5240069_3 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 441.0
YYD1_k127_5240069_4 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 356.0
YYD1_k127_5240069_5 ABC transporter substrate-binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000672 333.0
YYD1_k127_5240069_6 Diphthamide synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001902 276.0
YYD1_k127_5240069_7 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000193 255.0
YYD1_k127_5240069_8 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000006998 228.0
YYD1_k127_5240069_9 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000006111 237.0
YYD1_k127_5243817_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 4.682e-216 703.0
YYD1_k127_5243817_1 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000000000004777 207.0
YYD1_k127_5243817_2 long-chain fatty acid transporting porin activity - - - 0.00000000000000002917 83.0
YYD1_k127_5243817_3 Protein of unknown function (DUF1552) - - - 0.0000000000000871 75.0
YYD1_k127_5243817_4 COGs COG5616 integral membrane protein - - - 0.000000000002249 72.0
YYD1_k127_5243817_5 serine threonine protein kinase K08884,K11912 - 2.7.11.1 0.00000001096 61.0
YYD1_k127_5246747_0 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 378.0
YYD1_k127_5246747_1 transport protein CorA K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006832 347.0
YYD1_k127_5246747_2 Stage II sporulation protein K06381 - - 0.0000000000000000000000000000000000000000004285 175.0
YYD1_k127_5246747_3 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.0000000000000000000000000000000000000002735 168.0
YYD1_k127_5255306_0 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 321.0
YYD1_k127_5255306_1 D-isomer specific 2-hydroxyacid dehydrogenase K00015 - 1.1.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 302.0
YYD1_k127_5255306_10 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.0000000000000000000000006272 119.0
YYD1_k127_5255306_11 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 0.000000000000000000003466 95.0
YYD1_k127_5255306_12 Transglycosylase K05365,K05366 - 2.4.1.129,3.4.16.4 0.0000000000001691 78.0
YYD1_k127_5255306_13 PFAM Ribbon-helix-helix protein, copG family K21495 - - 0.000000000001482 70.0
YYD1_k127_5255306_14 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.00008328 46.0
YYD1_k127_5255306_2 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007753 286.0
YYD1_k127_5255306_3 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003257 270.0
YYD1_k127_5255306_4 Alanyl-tRNA synthetase K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000009726 274.0
YYD1_k127_5255306_5 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007973 252.0
YYD1_k127_5255306_6 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000001322 209.0
YYD1_k127_5255306_7 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000024 190.0
YYD1_k127_5255306_8 Fic/DOC family K07341 - - 0.00000000000000000000000000000000000000003611 159.0
YYD1_k127_5255306_9 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000002125 158.0
YYD1_k127_5256621_0 PFAM Prolyl oligopeptidase family - - - 2.942e-233 738.0
YYD1_k127_5256621_1 cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 445.0
YYD1_k127_5256621_10 peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.00000000000000000000000000000000224 134.0
YYD1_k127_5256621_11 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000003204 121.0
YYD1_k127_5256621_12 - - - - 0.00000000000000016 90.0
YYD1_k127_5256621_13 - - - - 0.0000000000000003778 85.0
YYD1_k127_5256621_14 Protein of unknown function (DUF1800) - - - 0.0000000000001848 83.0
YYD1_k127_5256621_15 Involved in the tonB-independent uptake of proteins K03641 - - 0.0000000000007622 81.0
YYD1_k127_5256621_16 Lysophospholipase L1-like esterase - - - 0.00000583 57.0
YYD1_k127_5256621_17 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 - - 0.0008427 51.0
YYD1_k127_5256621_2 transmembrane transporter activity K03535,K08194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 424.0
YYD1_k127_5256621_3 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 373.0
YYD1_k127_5256621_4 protein histidine kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 353.0
YYD1_k127_5256621_5 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000531 323.0
YYD1_k127_5256621_6 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002282 283.0
YYD1_k127_5256621_7 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003928 279.0
YYD1_k127_5256621_8 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000108 236.0
YYD1_k127_5256621_9 G/U mismatch-specific uracil-DNA glycosylase activity K01934,K03649 GO:0000700,GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008263,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.28,6.3.3.2 0.000000000000000000000000000000000000000000002318 171.0
YYD1_k127_5263598_0 ATP:ADP antiporter activity K01932,K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 426.0
YYD1_k127_5263598_1 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 382.0
YYD1_k127_5263598_2 Trypsin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 361.0
YYD1_k127_5263598_3 ATP ADP translocase K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000875 321.0
YYD1_k127_526524_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 396.0
YYD1_k127_526524_1 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 358.0
YYD1_k127_526524_2 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000002301 252.0
YYD1_k127_526524_3 - - - - 0.000000000000000000000000000000000000000000000008583 185.0
YYD1_k127_526524_4 Belongs to the UPF0301 (AlgH) family K07735 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000006729 127.0
YYD1_k127_526524_5 - - - - 0.0000000000000000000000000004068 124.0
YYD1_k127_526524_6 YCII-related domain - - - 0.00000000000000000000000000052 118.0
YYD1_k127_526524_7 TonB-dependent receptor - - - 0.00000000000001206 86.0
YYD1_k127_5266424_0 L-lactate permease K03303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 576.0
YYD1_k127_5266424_1 Cysteine-rich domain K11473 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 461.0
YYD1_k127_5266424_2 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 338.0
YYD1_k127_5266424_3 FAD linked oxidases, C-terminal domain K11472 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001404 265.0
YYD1_k127_5266424_4 Cytochrome b/b6/petB K00412,K03888 - - 0.0000000000000000000000000000000000000000000000000000000000007077 216.0
YYD1_k127_5266424_5 Rieske [2Fe-2S] domain K03886 - - 0.000000000000000000000000002447 117.0
YYD1_k127_5275795_0 TonB-dependent Receptor Plug K02014 - - 0.0 1015.0
YYD1_k127_5275795_1 DNA topological change K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006821 628.0
YYD1_k127_5275795_10 Domain of unknown function (DUF4281) - - - 0.0000000000000000000000000000000000003485 144.0
YYD1_k127_5275795_11 - - - - 0.00000000000000000000000000000000002715 153.0
YYD1_k127_5275795_12 Cytochrome C' - - - 0.0000000000000000000000000000000001137 141.0
YYD1_k127_5275795_13 - - - - 0.0000000000000000000000000000001236 133.0
YYD1_k127_5275795_14 membrane transporter protein K07090 - - 0.00000000000000000000001036 111.0
YYD1_k127_5275795_16 Cupin domain - - - 0.000392 44.0
YYD1_k127_5275795_2 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 330.0
YYD1_k127_5275795_3 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 321.0
YYD1_k127_5275795_4 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000847 268.0
YYD1_k127_5275795_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001634 252.0
YYD1_k127_5275795_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001017 248.0
YYD1_k127_5275795_7 Ankyrin repeats (many copies) - - - 0.0000000000000000000000000000000000000000000000000000000000001791 241.0
YYD1_k127_5275795_8 Phosphatase K20074 - 3.1.3.16 0.0000000000000000000000000000000000001118 149.0
YYD1_k127_5275795_9 WHG domain - - - 0.000000000000000000000000000000000000169 153.0
YYD1_k127_5301275_0 Glycosyl hydrolase family 67 C-terminus K01235 - 3.2.1.139 0.0 1028.0
YYD1_k127_5301275_1 PFAM Magnesium chelatase, ChlI subunit K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007776 539.0
YYD1_k127_5301275_2 PFAM Xylose isomerase domain protein TIM barrel K01805 - 5.3.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 523.0
YYD1_k127_5301275_3 Abc transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005784 260.0
YYD1_k127_5301275_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.000000001866 63.0
YYD1_k127_5301275_5 - - - - 0.00000006867 66.0
YYD1_k127_5316773_0 GMC oxidoreductase K00108 - 1.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006024 384.0
YYD1_k127_5316773_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000003516 220.0
YYD1_k127_5316773_2 DNA topological change - - - 0.0000000000000000000000000000000000000000000000000000002823 206.0
YYD1_k127_5316773_3 ATP:ADP antiporter activity K01932,K03301 - - 0.0000000000000000000000000006521 121.0
YYD1_k127_5316773_5 ATP-dependent Clp protease adaptor protein ClpS - - - 0.00000000000006886 79.0
YYD1_k127_5316773_6 Met-10+ like-protein - - - 0.0000000000628 68.0
YYD1_k127_5316773_7 ATP-dependent Clp protease adaptor protein ClpS - - - 0.0000001017 57.0
YYD1_k127_5316773_8 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.0000004418 59.0
YYD1_k127_5358685_0 Patatin-like phospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004242 527.0
YYD1_k127_5358685_1 sirohydrochlorin cobaltochelatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005681 297.0
YYD1_k127_5358685_2 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000006206 100.0
YYD1_k127_5358685_3 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0004242 51.0
YYD1_k127_5397208_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1236.0
YYD1_k127_5397208_1 Amino acid kinase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 514.0
YYD1_k127_5397208_2 PFAM Chlorite dismutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006651 268.0
YYD1_k127_5397208_3 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000000000000002332 233.0
YYD1_k127_5397208_4 PFAM Iron permease FTR1 - - - 0.00000000008871 64.0
YYD1_k127_5397208_5 Domain of unknown function (DUF4115) K15539 - - 0.0001453 51.0
YYD1_k127_5408276_0 Beta-lactamase K01286 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000001325 256.0
YYD1_k127_5408276_1 Putative transposase - - - 0.0000000000000000000000000000000000001353 145.0
YYD1_k127_5408276_2 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.000000000000000000000000000002939 122.0
YYD1_k127_5408276_3 - - - - 0.00000000000001289 79.0
YYD1_k127_5408276_4 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00007884 45.0
YYD1_k127_5423012_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 7.969e-245 765.0
YYD1_k127_5423012_1 phosphorelay signal transduction system K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003204 526.0
YYD1_k127_5423012_2 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 497.0
YYD1_k127_5423012_3 Multi-sensor signal transduction histidine kinase K07710 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 331.0
YYD1_k127_5423012_4 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016832,GO:0019637,GO:0044237,GO:0071704,GO:1901135 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548 295.0
YYD1_k127_5423012_5 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008596 316.0
YYD1_k127_5423012_6 membrane organization K07277,K09800 - - 0.0000000000000000000000000000000000000000000008154 192.0
YYD1_k127_5423012_7 Biotin-requiring enzyme - - - 0.000000000000000000005482 100.0
YYD1_k127_5423012_8 Fibronectin type 3 domain - - - 0.00000000002124 76.0
YYD1_k127_5423012_9 PFAM CAAX amino terminal protease family K07052 - - 0.0002682 51.0
YYD1_k127_5431144_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009214 515.0
YYD1_k127_5431144_1 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 406.0
YYD1_k127_5431144_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000003802 250.0
YYD1_k127_5431144_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000001412 203.0
YYD1_k127_5431144_4 Glycine cleavage system regulatory protein - - - 0.0000000000000000000000000000000000000000000002409 172.0
YYD1_k127_5431144_5 - - - - 0.000000000000000000000000000000000000000000531 171.0
YYD1_k127_5431144_7 - - - - 0.00007821 51.0
YYD1_k127_5431144_8 Belongs to the ompA family - - - 0.0001166 52.0
YYD1_k127_543754_0 (GMC) oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 437.0
YYD1_k127_543754_1 MreB/Mbl protein K03569 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0005886,GO:0007049,GO:0008150,GO:0008360,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0032505,GO:0042802,GO:0043093,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051301,GO:0051302,GO:0051782,GO:0051983,GO:0065007,GO:0065008,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 383.0
YYD1_k127_543754_2 cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005784 375.0
YYD1_k127_543754_3 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000001008 141.0
YYD1_k127_543754_4 PFAM aldo keto reductase - - - 0.00000000000000000000000000001098 130.0
YYD1_k127_543754_5 SnoaL-like polyketide cyclase K06893 - - 0.000000000000000000000009039 106.0
YYD1_k127_543754_6 - - - - 0.000000000000003534 80.0
YYD1_k127_543754_7 Methyltransferase FkbM domain - - - 0.000000000000262 79.0
YYD1_k127_544712_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 6.549e-298 931.0
YYD1_k127_544712_1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000004269 229.0
YYD1_k127_544712_2 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000138 220.0
YYD1_k127_544712_3 ECF sigma factor - - - 0.000000000000000000000000000000000000000002679 165.0
YYD1_k127_5448369_0 Male sterility protein K01710,K01784,K12450 - 4.2.1.46,4.2.1.76,5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006159 487.0
YYD1_k127_5448369_1 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 430.0
YYD1_k127_5448369_2 WbqC-like protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004985 297.0
YYD1_k127_5448369_3 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000001488 233.0
YYD1_k127_5448369_5 PFAM Uncharacterised protein family (UPF0104) K07027 - - 0.0000000000000000001488 101.0
YYD1_k127_5448369_6 Acetyltransferase (GNAT) domain - - - 0.0000000000000000007642 90.0
YYD1_k127_5454776_0 MatE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 570.0
YYD1_k127_5454776_1 4Fe-4S dicluster domain K05524 - - 0.00000000000000000000000000000000001147 138.0
YYD1_k127_5454776_2 - - - - 0.00000000000000000000000000000002172 132.0
YYD1_k127_5454776_3 - - - - 0.00000000000000007083 87.0
YYD1_k127_5454776_4 Carboxypeptidase regulatory-like domain - - - 0.0000000007342 67.0
YYD1_k127_5454776_5 Cytochrome C' - - - 0.00009655 52.0
YYD1_k127_5484611_0 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 611.0
YYD1_k127_5484611_1 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 496.0
YYD1_k127_5484611_3 - - - - 0.00000000000000000000000000000000000000000000000000000000001678 218.0
YYD1_k127_5484611_4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000008398 153.0
YYD1_k127_5491759_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 535.0
YYD1_k127_5491759_1 PFAM Acetamidase Formamidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 332.0
YYD1_k127_5491759_2 FG-GAP repeat - - - 0.00000000000000000000002266 101.0
YYD1_k127_5498087_0 Aminotransferase K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003644 473.0
YYD1_k127_5498087_1 reverse transcriptase K15342 - - 0.0000000000000000000000000000000000000000000000000000000002849 220.0
YYD1_k127_5498087_2 - - - - 0.000000000000000000000000000000000000000000001831 187.0
YYD1_k127_5498166_0 Sodium/calcium exchanger protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004538 560.0
YYD1_k127_5498166_1 NapC/NirT cytochrome c family, N-terminal region - GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0044237,GO:0044425,GO:0045333,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 341.0
YYD1_k127_5498166_2 Putative outer membrane beta-barrel porin, MtrB/PioB K22110 - - 0.00000000000000000000000000000000005615 153.0
YYD1_k127_5498166_3 VIT family - - - 0.0000000000000000002344 101.0
YYD1_k127_5498166_4 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.9.3.1 0.00002014 52.0
YYD1_k127_5502423_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286 577.0
YYD1_k127_5502423_1 Cys Met metabolism K01739,K01758 - 2.5.1.48,4.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 473.0
YYD1_k127_5502423_10 AAA ATPase domain - - - 0.0000000003702 72.0
YYD1_k127_5502423_12 DNA ligase D, 3'-phosphoesterase domain - - - 0.00002691 50.0
YYD1_k127_5502423_13 Septum formation initiator - - - 0.00005667 50.0
YYD1_k127_5502423_2 Histidine-specific methyltransferase, SAM-dependent K18911 - 2.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 299.0
YYD1_k127_5502423_3 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 283.0
YYD1_k127_5502423_4 PFAM SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001661 250.0
YYD1_k127_5502423_5 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000000002685 209.0
YYD1_k127_5502423_6 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000003658 217.0
YYD1_k127_5502423_7 Bacterial-like globin K06886 - - 0.00000000000000000000000000000000000000000000004902 173.0
YYD1_k127_5502423_8 protein involved in tolerance to divalent cations K03926 - - 0.0000000000000000000000191 105.0
YYD1_k127_5502423_9 negative regulation of translational initiation - - - 0.0000000000000000192 89.0
YYD1_k127_5509843_0 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005762 400.0
YYD1_k127_5509843_1 Transposase domain (DUF772) K07487 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 301.0
YYD1_k127_5509843_2 Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004805 288.0
YYD1_k127_5509843_3 Transposase domain (DUF772) K07487 - - 0.00000000000000000000000000000000000000000000004129 180.0
YYD1_k127_5509843_4 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000001398 179.0
YYD1_k127_5509843_5 Penicillinase repressor - - - 0.000000000000000000000000000000000000000007706 157.0
YYD1_k127_5509843_6 - K02172 - - 0.000000000000000000000000000000000000568 159.0
YYD1_k127_5509843_7 - - - - 0.00008364 53.0
YYD1_k127_5510225_0 Carboxypeptidase regulatory-like domain - - - 0.0 1034.0
YYD1_k127_5510225_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 5.255e-241 754.0
YYD1_k127_5510225_10 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001858 261.0
YYD1_k127_5510225_11 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000002656 249.0
YYD1_k127_5510225_12 electron transfer activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000001476 239.0
YYD1_k127_5510225_13 Bacterial extracellular solute-binding protein K02020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000212 241.0
YYD1_k127_5510225_14 - - - - 0.00000000000000000000000000000000000000000000000000000000002159 213.0
YYD1_k127_5510225_15 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000009192 206.0
YYD1_k127_5510225_16 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000004718 209.0
YYD1_k127_5510225_17 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000005959 190.0
YYD1_k127_5510225_18 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000007033 188.0
YYD1_k127_5510225_19 Bacterial PH domain - - - 0.0000000000000000000000000000000000000000000000002987 181.0
YYD1_k127_5510225_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 488.0
YYD1_k127_5510225_21 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000006277 172.0
YYD1_k127_5510225_22 lipid kinase activity - - - 0.0000000000000000000000000000000000000001775 164.0
YYD1_k127_5510225_23 Domain of unknown function (DUF4142) K08995 - - 0.00000000000000000000000000000002173 136.0
YYD1_k127_5510225_24 Putative adhesin - - - 0.000000000000000000000000000002157 132.0
YYD1_k127_5510225_25 - - - - 0.000000000000000000000000000008336 128.0
YYD1_k127_5510225_26 TOBE domain - - - 0.000000000000000000000000000008425 123.0
YYD1_k127_5510225_27 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000001599 108.0
YYD1_k127_5510225_28 LysM domain - - - 0.000000000000000002591 91.0
YYD1_k127_5510225_29 metal-dependent phosphoesterases (PHP family) - - - 0.000000000000000002841 95.0
YYD1_k127_5510225_3 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 434.0
YYD1_k127_5510225_30 - - - - 0.0000000000000257 79.0
YYD1_k127_5510225_4 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 406.0
YYD1_k127_5510225_5 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000345 358.0
YYD1_k127_5510225_6 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008809 341.0
YYD1_k127_5510225_7 eRF1 domain 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 327.0
YYD1_k127_5510225_8 TOBE domain K02017 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007949 333.0
YYD1_k127_5510225_9 molybdate abc transporter K02018,K15496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001438 279.0
YYD1_k127_5513735_0 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008535 418.0
YYD1_k127_5513735_1 Belongs to the glycosyl hydrolase 31 family K01811 GO:0003674,GO:0003824,GO:0004553,GO:0005488,GO:0005515,GO:0016787,GO:0016798,GO:0042802,GO:0080176 3.2.1.177 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002335 403.0
YYD1_k127_5513735_2 Amino acid kinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006934 341.0
YYD1_k127_5513735_3 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000141 181.0
YYD1_k127_5513735_4 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.00000000000000000000000000000000000000000000001943 178.0
YYD1_k127_5513735_5 RNA polymerase K03088 - - 0.0000000000000000004457 95.0
YYD1_k127_5528790_0 POT family K03305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 458.0
YYD1_k127_5528790_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 430.0
YYD1_k127_5528790_10 tRNA cytidylyltransferase activity - - - 0.000001985 59.0
YYD1_k127_5528790_2 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000002161 214.0
YYD1_k127_5528790_3 Uncharacterised protein family UPF0052 - - - 0.00000000000000000000000000000000000000000000000000000000005822 218.0
YYD1_k127_5528790_4 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000006028 198.0
YYD1_k127_5528790_5 DinB family - - - 0.000000000000000000000000000000000000000007948 167.0
YYD1_k127_5528790_6 transcriptional regulator PadR family - - - 0.00000000000000000000000000000000000000001104 156.0
YYD1_k127_5528790_7 PIN domain - - - 0.000000000000000000000000000000846 122.0
YYD1_k127_5528790_8 TPM domain K06872 - - 0.000000000000000000000000000001581 133.0
YYD1_k127_5528790_9 - - - - 0.00000000000000008308 94.0
YYD1_k127_5534467_0 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 382.0
YYD1_k127_5534467_1 SPFH Band 7 PHB domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 323.0
YYD1_k127_5534467_2 Arginyl tRNA synthetase N terminal dom K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 306.0
YYD1_k127_5534467_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000006894 190.0
YYD1_k127_5534467_4 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000001988 175.0
YYD1_k127_5534467_5 Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000001525 165.0
YYD1_k127_5534467_6 PFAM Bacterial regulatory proteins, gntR family K07979 - - 0.000000000000000003109 89.0
YYD1_k127_5534467_7 outer membrane autotransporter barrel domain protein - - - 0.00007871 53.0
YYD1_k127_5535911_0 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000000000000000001322 203.0
YYD1_k127_5535911_1 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000002838 197.0
YYD1_k127_5535911_2 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000000000000000000000005183 156.0
YYD1_k127_5535911_3 von Willebrand factor, type A - - - 0.00000000000000000003994 102.0
YYD1_k127_5535911_4 MacB-like periplasmic core domain - - - 0.00000000006466 69.0
YYD1_k127_5536441_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 504.0
YYD1_k127_5536441_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 336.0
YYD1_k127_5536441_2 PFAM glutamine amidotransferase class-I K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000002814 253.0
YYD1_k127_5536441_3 Shikimate dehydrogenase substrate binding domain K13832 - 1.1.1.25,4.2.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000002756 260.0
YYD1_k127_5536441_4 Indole-3-glycerol phosphate synthase K01609 GO:0000162,GO:0000287,GO:0003674,GO:0003824,GO:0004425,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016020,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043167,GO:0043169,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046219,GO:0046391,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0071944,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000006832 229.0
YYD1_k127_5536441_5 SpoIVB peptidase S55 - - - 0.0000000000000000000000000000000000001617 150.0
YYD1_k127_5546121_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 550.0
YYD1_k127_5546121_1 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 342.0
YYD1_k127_5546121_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 297.0
YYD1_k127_5546121_3 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 299.0
YYD1_k127_5546121_4 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000001537 250.0
YYD1_k127_5546121_5 Site-specific DNA-methyltransferase (Adenine-specific) K06223 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000006168 225.0
YYD1_k127_5546121_6 - - - - 0.00000000000001563 77.0
YYD1_k127_554819_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 398.0
YYD1_k127_554819_1 PQQ enzyme repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 316.0
YYD1_k127_554819_2 Belongs to the universal stress protein A family - - - 0.000000000000000000000000002314 123.0
YYD1_k127_554819_3 Universal stress protein family - - - 0.000000000000000000000004954 110.0
YYD1_k127_554819_5 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000003589 72.0
YYD1_k127_554819_6 Protein kinase domain K12132 - 2.7.11.1 0.00009613 48.0
YYD1_k127_5567975_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 490.0
YYD1_k127_5567975_1 PFAM Nucleotidyl transferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005946 344.0
YYD1_k127_5567975_2 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008215 320.0
YYD1_k127_5567975_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000002041 218.0
YYD1_k127_5567975_4 alkyl hydroperoxide reductase activity - - - 0.000000000000000000000000006666 112.0
YYD1_k127_5567975_5 Putative regulatory protein - - - 0.000000000000004312 79.0
YYD1_k127_5568833_0 domain protein - - - 1.106e-300 955.0
YYD1_k127_5568833_1 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000000000001462 203.0
YYD1_k127_5568833_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.000000000000000000000000000001457 136.0
YYD1_k127_5568833_3 23S rRNA-intervening sequence protein - - - 0.0007936 44.0
YYD1_k127_5575062_0 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 290.0
YYD1_k127_5575062_1 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001958 296.0
YYD1_k127_5575062_2 Acid phosphatase homologues K19302 - 3.6.1.27 0.00000000000000000000000009426 112.0
YYD1_k127_5575062_3 CHRD domain - - - 0.00001411 55.0
YYD1_k127_5580270_0 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 374.0
YYD1_k127_5580270_1 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006802 314.0
YYD1_k127_5580270_2 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000339 271.0
YYD1_k127_5580270_3 PFAM von Willebrand factor type A K07114,K12511 - - 0.0000000000000000000000000000000000000000000000000000000000000000108 236.0
YYD1_k127_5580270_4 - - - - 0.00000000000000000000000000000000000000000000005106 175.0
YYD1_k127_5580270_5 - - - - 0.0000000000000000000000000000000000000000000001637 184.0
YYD1_k127_5580270_6 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.00000000000000000000000000000001319 141.0
YYD1_k127_5580270_7 - - - - 0.000000000000000000000000000002458 123.0
YYD1_k127_5580270_8 - - - - 0.00000000000000004186 92.0
YYD1_k127_5580270_9 Cytochrome c - - - 0.0000000008966 61.0
YYD1_k127_5580853_0 cell shape determining protein MreB K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 448.0
YYD1_k127_5580853_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 373.0
YYD1_k127_5580853_10 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.00000000000000000000000000000000000007494 151.0
YYD1_k127_5580853_11 dUTP diphosphatase activity K01520,K13038 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0051259,GO:0051260,GO:0055086,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23,4.1.1.36,6.3.2.5 0.00000000000000000000000000000000008049 141.0
YYD1_k127_5580853_12 - - - - 0.0000001625 56.0
YYD1_k127_5580853_13 - - - - 0.0004458 49.0
YYD1_k127_5580853_2 Integral membrane protein TerC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005753 334.0
YYD1_k127_5580853_3 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006906 327.0
YYD1_k127_5580853_4 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 295.0
YYD1_k127_5580853_5 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001085 289.0
YYD1_k127_5580853_6 SMART AAA ATPase K02450 - - 0.00000000000000000000000000000000000000000000000000000000000005209 226.0
YYD1_k127_5580853_7 Protein of unknown function (DUF1499) - - - 0.000000000000000000000000000000000000000000000000000003115 199.0
YYD1_k127_5580853_8 Ferredoxin K04755 - - 0.0000000000000000000000000000000000000000000000000002497 186.0
YYD1_k127_5580853_9 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000003899 155.0
YYD1_k127_5591781_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006103 486.0
YYD1_k127_5591781_2 phosphoprotein phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000006531 236.0
YYD1_k127_5591781_3 phosphoprotein phosphatase activity K14680 - 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000001242 213.0
YYD1_k127_5591781_4 DNA-templated transcription, initiation - - - 0.00000000000000000000000001325 115.0
YYD1_k127_5591781_5 TLC ATP/ADP transporter K03301 - - 0.0000000000000000000007339 112.0
YYD1_k127_5594391_0 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005259 281.0
YYD1_k127_5594391_1 Bacterial low temperature requirement A protein (LtrA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001717 284.0
YYD1_k127_5594391_2 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000001472 149.0
YYD1_k127_5602642_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007068 299.0
YYD1_k127_5602642_1 Ndr family K01055 - 3.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000008169 237.0
YYD1_k127_5602642_2 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000005641 195.0
YYD1_k127_5602642_3 Domain of unknown function (DUF4399) - - - 0.0000000000000000000614 96.0
YYD1_k127_5606912_4 Fatty acid hydroxylase superfamily - - - 0.0003457 48.0
YYD1_k127_5610179_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008916 402.0
YYD1_k127_5610179_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005695 326.0
YYD1_k127_5610179_2 WD40 domain protein beta Propeller - - - 0.00000000000000000000000000000001876 134.0
YYD1_k127_5610179_3 phosphoprotein phosphatase activity K14680 - 6.5.1.3 0.0000000001306 69.0
YYD1_k127_5611503_0 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 1.446e-244 783.0
YYD1_k127_5611503_1 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 313.0
YYD1_k127_5611503_2 - - - - 0.00000000000001108 82.0
YYD1_k127_5620420_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 484.0
YYD1_k127_5620420_1 PFAM aminotransferase, class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 370.0
YYD1_k127_5620420_10 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000005953 129.0
YYD1_k127_5620420_11 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000000000000004936 87.0
YYD1_k127_5620420_2 phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 350.0
YYD1_k127_5620420_3 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009978 355.0
YYD1_k127_5620420_4 ATP synthesis coupled electron transport K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 341.0
YYD1_k127_5620420_5 aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001116 290.0
YYD1_k127_5620420_6 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000003457 220.0
YYD1_k127_5620420_7 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000000000000000000000000002623 213.0
YYD1_k127_5620420_8 AI-2E family transporter K03548 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.000000000000000000000000000000000003894 150.0
YYD1_k127_5620420_9 Belongs to the ompA family - - - 0.0000000000000000000000000000002405 132.0
YYD1_k127_5621044_0 Histidine ammonia-lyase K01745 - 4.3.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005159 498.0
YYD1_k127_5621044_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 469.0
YYD1_k127_5621044_10 Ferric siderophore transporter, periplasmic energy transduction protein TonB K03832 - - 0.0000000001203 71.0
YYD1_k127_5621044_2 Oxidoreductase molybdopterin binding domain K07147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005335 378.0
YYD1_k127_5621044_3 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 321.0
YYD1_k127_5621044_4 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 310.0
YYD1_k127_5621044_5 ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 298.0
YYD1_k127_5621044_6 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 283.0
YYD1_k127_5621044_8 - - - - 0.00000000000000000000004002 108.0
YYD1_k127_5621044_9 energy transducer activity - - - 0.0000000001203 71.0
YYD1_k127_5623065_0 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000002306 263.0
YYD1_k127_5623065_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000399 261.0
YYD1_k127_5623065_2 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000001576 228.0
YYD1_k127_5623065_3 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000007662 173.0
YYD1_k127_5623065_4 EVE domain - - - 0.000000000000000000000000000000000000000008793 157.0
YYD1_k127_5623065_5 - - - - 0.0000000000000000000000000000000000000009528 169.0
YYD1_k127_5623065_6 amino acid-binding ACT domain protein K04518 - 4.2.1.51 0.00000000000000000000000000000000000009498 144.0
YYD1_k127_5623065_7 MacB-like periplasmic core domain - - - 0.000000000000000000000002865 110.0
YYD1_k127_5623065_8 lipoprotein localization to outer membrane - - - 0.00000000000000000004092 101.0
YYD1_k127_5623065_9 - - - - 0.00000000002266 77.0
YYD1_k127_5635833_0 DNA topological change K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000001683 216.0
YYD1_k127_5635833_1 Ankyrin repeats (many copies) - - - 0.0000000000000000000000000000000000000000000000000007323 203.0
YYD1_k127_5635833_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000009888 179.0
YYD1_k127_5635833_3 Methyltransferase domain - - - 0.0000000000000000000000000008797 113.0
YYD1_k127_5640792_0 - K13582,K13924,K15580 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008023 444.0
YYD1_k127_5640792_1 mitochondrial gene expression - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 370.0
YYD1_k127_5640792_10 Peptidase family M23 K21472 - - 0.000000000000000000000000000000000000000000000000000001649 199.0
YYD1_k127_5640792_11 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000003397 199.0
YYD1_k127_5640792_12 - - - - 0.000000000000000000000000001895 124.0
YYD1_k127_5640792_13 Adenylate cyclase - - - 0.000000000000001522 91.0
YYD1_k127_5640792_14 Glycosyl transferase family 2 - - - 0.000000004314 67.0
YYD1_k127_5640792_2 Putative cyclase K07130 GO:0003674,GO:0003824,GO:0004061,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 323.0
YYD1_k127_5640792_3 peptidoglycan-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 304.0
YYD1_k127_5640792_4 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001053 301.0
YYD1_k127_5640792_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005509 291.0
YYD1_k127_5640792_6 Alkaline phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002095 298.0
YYD1_k127_5640792_7 VWA-like domain (DUF2201) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003268 272.0
YYD1_k127_5640792_8 - - - - 0.000000000000000000000000000000000000000000000000000000000002712 214.0
YYD1_k127_5640792_9 PFAM ATPase associated with various cellular activities AAA_3 - - - 0.000000000000000000000000000000000000000000000000000000000008504 221.0
YYD1_k127_5650231_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 3.445e-214 680.0
YYD1_k127_5650231_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 606.0
YYD1_k127_5650231_2 PFAM Aminotransferase class I and II K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006999 314.0
YYD1_k127_5650231_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000006116 215.0
YYD1_k127_5650231_4 Histidine kinase K13598 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000001477 214.0
YYD1_k127_5650231_5 PQQ enzyme repeat K17713 - - 0.0000000000000001672 93.0
YYD1_k127_5657481_0 Protein of unknown function (DUF1587) - - - 6.521e-200 641.0
YYD1_k127_5657481_1 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008953 503.0
YYD1_k127_5657481_2 ASCH - - - 0.00000000000000000000000000000000000000003346 154.0
YYD1_k127_5657481_3 - - - - 0.000000000000000001211 93.0
YYD1_k127_5657481_4 Von Willebrand factor type A domain K07114 - - 0.000000000000009503 86.0
YYD1_k127_5657481_5 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.00000000005646 70.0
YYD1_k127_5670896_0 Histidine kinase K07683 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008156 349.0
YYD1_k127_5670896_1 glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001444 290.0
YYD1_k127_5670896_2 YCII-related domain - - - 0.000000000000000000000000000000000000000000341 162.0
YYD1_k127_5670896_3 ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component - - - 0.000000000000000000000000000000000000000001139 163.0
YYD1_k127_5670896_4 Winged helix DNA-binding domain - - - 0.00000000000000000000000000000002866 132.0
YYD1_k127_5670896_5 AMP-dependent synthetase K01895 - 6.2.1.1 0.0000000000000000000001829 101.0
YYD1_k127_5670896_6 EVE domain - - - 0.00000002547 60.0
YYD1_k127_5671316_0 Carboxypeptidase regulatory-like domain - - - 3.924e-308 979.0
YYD1_k127_5671316_1 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004573 387.0
YYD1_k127_5671316_2 NIF3 (NGG1p interacting factor 3) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 327.0
YYD1_k127_5671316_3 ABC transporter K10441 - 3.6.3.17 0.0000000000000000000000006204 105.0
YYD1_k127_5671316_4 NIF3 (NGG1p interacting factor 3) - - - 0.000000000000000000000004318 109.0
YYD1_k127_5681994_0 COG0463 Glycosyltransferases involved in cell wall biogenesis K20444 - - 0.0 1069.0
YYD1_k127_5681994_1 Wzt C-terminal domain K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 391.0
YYD1_k127_5681994_2 Glycosyl transferase, family 2 K00712 - 2.4.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 370.0
YYD1_k127_5681994_3 methyltransferase - - - 0.0000000000001723 86.0
YYD1_k127_5688538_0 NAD(P)H-binding K17947 - 5.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008392 372.0
YYD1_k127_5688538_1 Cytidylyltransferase K00983 - 2.7.7.43 0.000000000000000000000000000000000000000000000000000000000007049 214.0
YYD1_k127_5688538_2 UDP-N-acetylglucosamine 2-epimerase - - - 0.00000000000000000000000000000000000000000000000000000003571 199.0
YYD1_k127_5688538_4 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000007746 82.0
YYD1_k127_5688538_5 Protein of unknown function (DUF1698) - - - 0.0000006272 61.0
YYD1_k127_5725394_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 3.504e-209 657.0
YYD1_k127_5725394_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 366.0
YYD1_k127_5725394_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000419 365.0
YYD1_k127_5725394_3 Binding-protein-dependent transport system inner membrane component K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 314.0
YYD1_k127_5725394_4 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005036 278.0
YYD1_k127_5725394_5 Protein of unknown function DUF47 K02039,K07220 GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.00000000000000000000000000000000000000000000000000000000000000002067 230.0
YYD1_k127_5725394_6 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000006341 231.0
YYD1_k127_5725394_7 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000001385 201.0
YYD1_k127_5725394_8 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.000000004025 60.0
YYD1_k127_5753247_0 Formylmethanofuran dehydrogenase subunit A K00200 - 1.2.7.12 4.106e-231 727.0
YYD1_k127_5753247_1 Molybdopterin oxidoreductase K00201 - 1.2.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 438.0
YYD1_k127_5753247_2 Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT) K00672 GO:0003674,GO:0003824,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0015947,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0030270,GO:0043446,GO:0044237,GO:0044281,GO:0071704 2.3.1.101 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007757 358.0
YYD1_k127_5753247_3 selenocysteine insertion sequence binding K03833 GO:0000049,GO:0000166,GO:0001514,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006412,GO:0006414,GO:0006417,GO:0006451,GO:0006518,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009069,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016259,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031326,GO:0032268,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034248,GO:0034641,GO:0034645,GO:0035368,GO:0035639,GO:0036094,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 360.0
YYD1_k127_5753247_4 formylmethanofuran dehydrogenase subunit C K00202 - 1.2.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005661 292.0
YYD1_k127_5753247_5 converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001399 282.0
YYD1_k127_5753247_6 Aldose 1-epimerase - - - 0.0000000000000000000000000003498 125.0
YYD1_k127_5753247_7 PFAM molydopterin dinucleotide-binding region K00203 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0048037,GO:0051536,GO:0051540,GO:0055114 1.2.7.12 0.000000000004355 72.0
YYD1_k127_5754419_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003473 533.0
YYD1_k127_5754419_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 321.0
YYD1_k127_5754419_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000002191 279.0
YYD1_k127_5754419_3 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000001373 188.0
YYD1_k127_5754419_4 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000005656 166.0
YYD1_k127_5754419_5 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000001084 88.0
YYD1_k127_5754419_6 RNA polymerase K03088 - - 0.000000000000000007279 90.0
YYD1_k127_5779339_0 Sugar (and other) transporter K05819,K08178 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 422.0
YYD1_k127_5779339_1 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009556 386.0
YYD1_k127_5779339_2 ankyrin repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 349.0
YYD1_k127_5779339_3 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.00000000000000000000000000000000000000000000000000000002244 212.0
YYD1_k127_5779339_4 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000000000003971 192.0
YYD1_k127_5779339_5 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000001407 129.0
YYD1_k127_5779339_6 Transposase - - - 0.00004554 52.0
YYD1_k127_5781135_0 AMP-binding enzyme C-terminal domain - - - 1.881e-240 754.0
YYD1_k127_5781135_1 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 526.0
YYD1_k127_5781135_2 phosphorelay signal transduction system K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 510.0
YYD1_k127_5781135_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 447.0
YYD1_k127_5781135_4 ATP:ADP antiporter activity K01932,K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 362.0
YYD1_k127_5781135_5 Tetratricopeptide repeat - - - 0.00008556 54.0
YYD1_k127_5793902_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 475.0
YYD1_k127_5793902_1 Belongs to the ClpA ClpB family K03696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003704 316.0
YYD1_k127_5793902_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000312 283.0
YYD1_k127_5793902_3 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003057 244.0
YYD1_k127_5793902_4 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000006914 236.0
YYD1_k127_5793902_5 Antibiotic biosynthesis monooxygenase K11530 - 5.3.1.32 0.000000000000002931 79.0
YYD1_k127_5811562_0 transport - - - 2.21e-234 772.0
YYD1_k127_5811562_1 UPF0314 protein - - - 0.00000000000000000000000000000000000000701 146.0
YYD1_k127_5815902_0 Periplasmic protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 447.0
YYD1_k127_5815902_1 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000007984 255.0
YYD1_k127_5815902_2 Belongs to the 'phage' integrase family - - - 0.00000000000002506 79.0
YYD1_k127_5834431_0 MutS domain I K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 2.208e-256 818.0
YYD1_k127_5834431_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 396.0
YYD1_k127_5834431_2 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 4.1.1.65 0.000000000000000000000000000000000000000000000000000002329 198.0
YYD1_k127_5834431_3 Glycoprotease family K01409,K14742 - 2.3.1.234 0.000000000000000000000000000001184 131.0
YYD1_k127_5834431_4 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000000000000002921 134.0
YYD1_k127_5834431_5 Protein of unknown function (DUF465) - - - 0.0000002636 56.0
YYD1_k127_5834431_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00005057 48.0
YYD1_k127_5860096_0 type VI secretion protein K11900 - - 1.247e-297 915.0
YYD1_k127_5860096_1 ImcF-related N-terminal domain K11891 - - 2.799e-272 878.0
YYD1_k127_5860096_10 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009643 417.0
YYD1_k127_5860096_11 Bacterial sugar transferase K03606 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 424.0
YYD1_k127_5860096_12 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 392.0
YYD1_k127_5860096_13 Type IV VI secretion system protein, DotU family K11892 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 395.0
YYD1_k127_5860096_14 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009326 380.0
YYD1_k127_5860096_15 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 383.0
YYD1_k127_5860096_16 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784,K12448 - 5.1.3.2,5.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 367.0
YYD1_k127_5860096_17 Virulence protein SciE type K11898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005307 362.0
YYD1_k127_5860096_18 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006694 368.0
YYD1_k127_5860096_19 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 368.0
YYD1_k127_5860096_2 Type VI secretion protein K11896 - - 6.323e-256 805.0
YYD1_k127_5860096_20 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 365.0
YYD1_k127_5860096_21 type VI secretion-associated protein, BMA_A0400 family K11890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 346.0
YYD1_k127_5860096_22 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006592 314.0
YYD1_k127_5860096_23 Type VI secretion system, VipA, VC_A0107 or Hcp2 K11901 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 290.0
YYD1_k127_5860096_24 Forkhead associated domain K11894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004958 267.0
YYD1_k127_5860096_25 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000008939 246.0
YYD1_k127_5860096_26 Type VI secretion system effector, Hcp K11903 - - 0.000000000000000000000000000000000000000000000000000000000000000257 223.0
YYD1_k127_5860096_27 peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000001005 218.0
YYD1_k127_5860096_28 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000001023 225.0
YYD1_k127_5860096_29 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000001755 205.0
YYD1_k127_5860096_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 565.0
YYD1_k127_5860096_30 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000002113 209.0
YYD1_k127_5860096_31 domain protein - - - 0.0000000000000000000000000000000000000000000000000002259 197.0
YYD1_k127_5860096_32 TIGRFAM type VI secretion system lysozyme-related protein K11897 - - 0.0000000000000000000000000000000000000000000000000006925 189.0
YYD1_k127_5860096_33 Type VI secretion system effector, Hcp K11903 - - 0.0000000000000000000000000000000000000000000000001938 185.0
YYD1_k127_5860096_34 DinB family - - - 0.0000000000000000000000000000000000000000000001208 172.0
YYD1_k127_5860096_35 Major facilitator superfamily K08161 - - 0.000000000000000000000000000000000000000000001118 182.0
YYD1_k127_5860096_36 Protein of unknown function (DUF1572) - - - 0.00000000000000000000000000000000000000000001711 168.0
YYD1_k127_5860096_37 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000002665 175.0
YYD1_k127_5860096_38 TIGRFAM type VI secretion-associated protein, ImpA family K11902 - - 0.0000000000000000000000000000000000000000003041 172.0
YYD1_k127_5860096_39 Pfam:T6SS_VasB K11895 - - 0.00000000000000000000000000000000000000005547 155.0
YYD1_k127_5860096_4 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008909 567.0
YYD1_k127_5860096_40 Glycosyltransferase like family 2 K07011 - - 0.00000000000000000000000000000000000001763 156.0
YYD1_k127_5860096_41 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000002962 157.0
YYD1_k127_5860096_42 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000005733 138.0
YYD1_k127_5860096_43 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000000000007939 132.0
YYD1_k127_5860096_44 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000001109 129.0
YYD1_k127_5860096_45 CDP-alcohol phosphatidyltransferase K00995,K08744 - 2.7.8.41,2.7.8.5 0.000000000000000000000000000003379 126.0
YYD1_k127_5860096_46 bacterial (prokaryotic) histone like domain K03530 - - 0.00000000000000000000000000005507 125.0
YYD1_k127_5860096_47 protein conserved in bacteria K11906 - - 0.000000000000000000000000002423 118.0
YYD1_k127_5860096_48 regulatory protein, MerR - - - 0.000000000001044 76.0
YYD1_k127_5860096_49 methyltransferase - - - 0.000000000001193 77.0
YYD1_k127_5860096_5 Acyl-CoA dehydrogenase, C-terminal domain K16173 - 1.3.99.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006134 513.0
YYD1_k127_5860096_50 dehydrogenase - - - 0.000003721 52.0
YYD1_k127_5860096_51 S-layer homology domain - - - 0.00001415 57.0
YYD1_k127_5860096_52 Tetratricopeptide repeat - - - 0.0004015 53.0
YYD1_k127_5860096_6 lipid A export permease ATP-binding protein MsbA K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004591 484.0
YYD1_k127_5860096_7 GDP-mannose 4,6 dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008253 470.0
YYD1_k127_5860096_8 type VI secretion protein K11893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009164 477.0
YYD1_k127_5860096_9 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008241 417.0
YYD1_k127_5870670_0 PLD-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 335.0
YYD1_k127_5870670_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 333.0
YYD1_k127_5870670_10 BON domain - - - 0.00000000008844 73.0
YYD1_k127_5870670_11 - - - - 0.00006935 45.0
YYD1_k127_5870670_2 dTDP biosynthetic process K00560,K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.1.1.45,2.7.4.9,4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 302.0
YYD1_k127_5870670_3 ABC transporter transmembrane region K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 294.0
YYD1_k127_5870670_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001246 265.0
YYD1_k127_5870670_5 dTDP biosynthetic process K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.9,4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000004885 263.0
YYD1_k127_5870670_6 Belongs to the MlaE permease family K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000007765 239.0
YYD1_k127_5870670_7 pfam abc K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000008509 234.0
YYD1_k127_5870670_8 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000000000000000006551 231.0
YYD1_k127_5870670_9 Histidine kinase-like ATPase domain K01338,K04757,K06379,K08282,K17752 - 2.7.11.1,3.4.21.53 0.00000000000000000000000000000000000000000000000000000002986 206.0
YYD1_k127_5870868_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006129 452.0
YYD1_k127_5870868_1 LexA-binding, inner membrane-associated putative hydrolase K07038 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000001407 158.0
YYD1_k127_5871442_0 PFAM metal-dependent phosphohydrolase, HD sub domain - GO:0003674,GO:0003824,GO:0004112,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008081,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009187,GO:0009214,GO:0009987,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 432.0
YYD1_k127_5871442_1 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001206 266.0
YYD1_k127_5871442_10 PEGA domain K15539 - - 0.000004201 57.0
YYD1_k127_5871442_12 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000703 51.0
YYD1_k127_5871442_3 - - - - 0.000000000000000000000000001372 116.0
YYD1_k127_5871442_4 - - - - 0.000000000000000000001774 105.0
YYD1_k127_5871442_5 PFAM PEGA domain - - - 0.000000000000000000103 104.0
YYD1_k127_5871442_7 BNR repeat-like domain - - - 0.0000000000002645 83.0
YYD1_k127_5871442_8 Belongs to the peptidase S8 family - - - 0.000000001557 70.0
YYD1_k127_5877753_0 Heat shock 70 kDa protein K04043 - - 9.886e-296 917.0
YYD1_k127_5877753_1 PQQ-like domain K05889 - 1.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006802 548.0
YYD1_k127_5877753_10 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000000000000000000000003529 157.0
YYD1_k127_5877753_11 PFAM Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.000000000000000000000000000000000142 147.0
YYD1_k127_5877753_12 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000003097 130.0
YYD1_k127_5877753_13 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000002218 69.0
YYD1_k127_5877753_14 2OG-Fe(II) oxygenase superfamily K15429 - 2.1.1.228 0.0000000047 68.0
YYD1_k127_5877753_15 Hsp20/alpha crystallin family K13993 - - 0.00000002355 62.0
YYD1_k127_5877753_16 Tetratricopeptide repeat - - - 0.00000006802 61.0
YYD1_k127_5877753_17 haloacid dehalogenase-like hydrolase - - - 0.0001714 53.0
YYD1_k127_5877753_18 - - - - 0.0008302 46.0
YYD1_k127_5877753_2 arylsulfatase activity K01132 - 3.1.6.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 520.0
YYD1_k127_5877753_3 Trehalose utilisation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 407.0
YYD1_k127_5877753_4 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008272 396.0
YYD1_k127_5877753_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003604 377.0
YYD1_k127_5877753_6 YmdB-like protein K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 314.0
YYD1_k127_5877753_7 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000002972 263.0
YYD1_k127_5877753_8 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000004248 168.0
YYD1_k127_5877753_9 - - - - 0.00000000000000000000000000000000000000001514 166.0
YYD1_k127_588345_0 acr, cog1565 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 345.0
YYD1_k127_588345_1 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 327.0
YYD1_k127_588345_2 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000121 217.0
YYD1_k127_588345_3 methylenetetrahydrofolate reductase (NAD(P)H) activity K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000005642 169.0
YYD1_k127_588345_4 von Willebrand factor, type A K07114 - - 0.0001725 52.0
YYD1_k127_5888366_0 Pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.0 1159.0
YYD1_k127_5888366_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1075.0
YYD1_k127_5888366_10 Rieske-like [2Fe-2S] domain K00363 - 1.7.1.15 0.0000000000000000000000000005648 120.0
YYD1_k127_5888366_11 NUDIX domain - - - 0.0000000000000000000000004215 110.0
YYD1_k127_5888366_2 NMT1-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003229 567.0
YYD1_k127_5888366_3 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 529.0
YYD1_k127_5888366_4 COG0600 ABC-type nitrate sulfonate bicarbonate transport system permease component K15577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 345.0
YYD1_k127_5888366_5 Alginate export - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 323.0
YYD1_k127_5888366_6 ANTAR K01719 - 4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003029 312.0
YYD1_k127_5888366_7 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007186 292.0
YYD1_k127_5888366_8 COG1116 ABC-type nitrate sulfonate K15578 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001121 248.0
YYD1_k127_5888366_9 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000006152 221.0
YYD1_k127_5896139_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 2.49e-197 647.0
YYD1_k127_5896139_1 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000001294 158.0
YYD1_k127_5896139_2 Putative restriction endonuclease - - - 0.000000000000000000000000000000000006578 140.0
YYD1_k127_5896139_3 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000179 106.0
YYD1_k127_5896139_4 Putative restriction endonuclease - - - 0.000000000002877 68.0
YYD1_k127_5901991_0 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 557.0
YYD1_k127_5901991_1 PFAM major facilitator superfamily MFS_1 K08223 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007912 507.0
YYD1_k127_5901991_10 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759,K05606 - 4.4.1.5,5.1.99.1 0.000000000000000000000000000000000002473 153.0
YYD1_k127_5901991_11 PFAM von Willebrand factor type A K07114 - - 0.0000000000000000000000000000000004075 145.0
YYD1_k127_5901991_12 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000002516 124.0
YYD1_k127_5901991_13 - - - - 0.0000000000000000001329 103.0
YYD1_k127_5901991_14 Protein tyrosine kinase - - - 0.00000000000005659 84.0
YYD1_k127_5901991_15 PFAM VanZ like - - - 0.00000000000006437 78.0
YYD1_k127_5901991_16 - - - - 0.00000000000006544 83.0
YYD1_k127_5901991_17 COGs COG2912 conserved - - - 0.00000000008804 64.0
YYD1_k127_5901991_18 Predicted membrane protein (DUF2085) - - - 0.0000001687 59.0
YYD1_k127_5901991_2 COG0524 Sugar kinases, ribokinase family K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 406.0
YYD1_k127_5901991_20 - - - - 0.00001807 54.0
YYD1_k127_5901991_21 energy transducer activity K03832,K07126 - - 0.0003273 52.0
YYD1_k127_5901991_3 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000355 421.0
YYD1_k127_5901991_4 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 384.0
YYD1_k127_5901991_5 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005227 364.0
YYD1_k127_5901991_6 GTPase activity K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 307.0
YYD1_k127_5901991_7 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000002718 248.0
YYD1_k127_5901991_8 MacB-like periplasmic core domain K09808 - - 0.000000000000000000000000000000000000000009527 161.0
YYD1_k127_5901991_9 6,7-dimethyl-8-ribityllumazine synthase K00794 - 2.5.1.78 0.00000000000000000000000000000000000000003412 157.0
YYD1_k127_5908058_0 topoisomerase K02469 - 5.99.1.3 3.493e-286 898.0
YYD1_k127_5908058_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 1.682e-224 726.0
YYD1_k127_5908058_2 helix_turn_helix gluconate operon transcriptional repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005791 353.0
YYD1_k127_5908058_3 Conserved hypothetical protein (DUF2461) - - - 0.00000000000000000000000000000000000000000000000001289 190.0
YYD1_k127_5911431_0 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007728 462.0
YYD1_k127_5911431_1 Protein of unknown function (DUF3089) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 434.0
YYD1_k127_5911431_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006749 354.0
YYD1_k127_5911431_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 343.0
YYD1_k127_5911431_4 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 352.0
YYD1_k127_5911431_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 303.0
YYD1_k127_5911431_6 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001493 260.0
YYD1_k127_5911431_7 - - - - 0.0000000000000000000000000000000000000000000000004683 183.0
YYD1_k127_5911431_8 PQQ-like domain K00114 - 1.1.2.8 0.00001102 49.0
YYD1_k127_5911431_9 - - - - 0.0001225 49.0
YYD1_k127_591622_0 Flavin containing amine oxidoreductase - - - 2.552e-283 881.0
YYD1_k127_591622_1 metallopeptidase activity K03568 - - 3.592e-215 680.0
YYD1_k127_591622_10 domain protein K14194 - - 0.000000000000000000000000000000000001644 154.0
YYD1_k127_591622_11 methylamine metabolic process K15977 - - 0.000000000000000000000000000001275 125.0
YYD1_k127_591622_12 - - - - 0.000000000000000000000000000005762 124.0
YYD1_k127_591622_13 - - - - 0.0000000000000007673 84.0
YYD1_k127_591622_14 Dienelactone hydrolase K01061 - 3.1.1.45 0.0000007376 54.0
YYD1_k127_591622_15 Two component transcriptional regulator, LuxR family - - - 0.00001435 52.0
YYD1_k127_591622_16 23S rRNA-intervening sequence protein - - - 0.00005738 49.0
YYD1_k127_591622_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005719 530.0
YYD1_k127_591622_3 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 521.0
YYD1_k127_591622_4 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008877 505.0
YYD1_k127_591622_5 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 479.0
YYD1_k127_591622_6 TIGRFAM phytoene desaturase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008559 455.0
YYD1_k127_591622_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000003869 223.0
YYD1_k127_591622_8 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 0.000000000000000000000000000000000000000000000000005141 186.0
YYD1_k127_591622_9 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000001557 158.0
YYD1_k127_5921862_0 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 462.0
YYD1_k127_5921862_1 DNA topological change - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002877 267.0
YYD1_k127_5921862_2 histone H2A-K13 ubiquitination K01338,K07157 - 3.4.21.53 0.000000000000000000000000000000009569 135.0
YYD1_k127_5921862_4 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.00000000000000000004068 103.0
YYD1_k127_5921862_5 Protein of unknown function (DUF1573) - - - 0.000000000002728 78.0
YYD1_k127_5921862_6 PEGA domain - - - 0.00003236 55.0
YYD1_k127_5921862_7 adenylate kinase K00939 - 2.7.4.3 0.0001086 45.0
YYD1_k127_5927538_0 DNA topological change K03168 - 5.99.1.2 6.757e-224 725.0
YYD1_k127_5927538_1 FAD binding domain - - - 7.901e-222 699.0
YYD1_k127_5927538_10 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000001234 110.0
YYD1_k127_5927538_11 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000005226 60.0
YYD1_k127_5927538_12 SMART Tetratricopeptide domain protein - - - 0.000000002188 69.0
YYD1_k127_5927538_2 Glucose-6-phosphate dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008311 587.0
YYD1_k127_5927538_3 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005041 460.0
YYD1_k127_5927538_4 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000458 385.0
YYD1_k127_5927538_5 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009313 319.0
YYD1_k127_5927538_6 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000001061 233.0
YYD1_k127_5927538_7 response to abiotic stimulus K06867 - - 0.0000000000000000000000000000000000000000000000007784 196.0
YYD1_k127_5927538_8 DnaJ molecular chaperone homology domain - - - 0.000000000000000000000000000000000000002211 154.0
YYD1_k127_5927538_9 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000545 125.0
YYD1_k127_5931293_0 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 590.0
YYD1_k127_5931293_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 392.0
YYD1_k127_5931293_2 protein kinase activity K01972,K02342,K04096 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 2.7.7.7,6.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 351.0
YYD1_k127_5931293_3 electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005288 297.0
YYD1_k127_5931293_4 COG0346 Lactoylglutathione lyase and related lyases K07032 - - 0.0000000000000000000000000000000000000000000000005932 179.0
YYD1_k127_5931293_5 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000006042 167.0
YYD1_k127_5931293_6 phosphorelay signal transduction system K03413 - - 0.0000000000000000000000000000000000000009621 151.0
YYD1_k127_5931293_7 Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma- L-glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine - - - 0.000000000000000000000000000000001635 138.0
YYD1_k127_5931293_8 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000006845 93.0
YYD1_k127_5932559_0 Proton-conducting membrane transporter K00342,K05575 - 1.6.5.3 6.554e-200 637.0
YYD1_k127_5932559_1 NADH-quinone oxidoreductase chain L K00341,K05577 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 568.0
YYD1_k127_5932559_10 Transposase - - - 0.0000000000000001954 87.0
YYD1_k127_5932559_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343,K05573 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009275 454.0
YYD1_k127_5932559_3 Transposase (IS116 IS110 IS902 family) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 315.0
YYD1_k127_5932559_4 4Fe-4S dicluster domain K00338,K02573,K03941 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000004498 144.0
YYD1_k127_5932559_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 - 1.6.5.3 0.0000000000000000000000000000003932 126.0
YYD1_k127_5932559_6 - - - - 0.000000000000000000000000007948 113.0
YYD1_k127_5932559_7 Protein of unknown function (DUF433) - - - 0.00000000000000000000000001078 111.0
YYD1_k127_5932559_8 PFAM Integrase core domain - - - 0.000000000000000000000007007 105.0
YYD1_k127_5932559_9 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339,K05578 - 1.6.5.3 0.00000000000000000000004487 108.0
YYD1_k127_5936590_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1500.0
YYD1_k127_5936590_1 Acts as a magnesium transporter K03281,K04767,K06213,K15986 GO:0000287,GO:0003674,GO:0005488,GO:0005515,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015693,GO:0030001,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0051179,GO:0051234,GO:0070838,GO:0072511 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000551 388.0
YYD1_k127_5936590_2 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003869 392.0
YYD1_k127_5936590_3 Glycyl-tRNA synthetase alpha K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005544 363.0
YYD1_k127_5936590_4 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000001343 209.0
YYD1_k127_5936590_5 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000013 100.0
YYD1_k127_594231_0 Uncharacterised protein family (UPF0182) K09118 - - 2.451e-201 641.0
YYD1_k127_594231_1 Chase2 domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 404.0
YYD1_k127_594231_2 tRNA pseudouridine synthase activity K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002236 283.0
YYD1_k127_594231_3 Oxidoreductase molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007748 265.0
YYD1_k127_594231_4 BAAT / Acyl-CoA thioester hydrolase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000009154 233.0
YYD1_k127_594231_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000003759 151.0
YYD1_k127_594231_6 PFAM OmpA MotB domain protein - - - 0.0000000000000000000000000000000004389 139.0
YYD1_k127_594231_7 FecR protein - - - 0.000000000000000000000000000002894 124.0
YYD1_k127_594231_8 DinB family - - - 0.000000000000000000002268 100.0
YYD1_k127_594231_9 Helix-turn-helix domain - - - 0.00003749 51.0
YYD1_k127_596680_0 Dehydrogenase K00117 - 1.1.5.2 2.796e-196 630.0
YYD1_k127_596680_1 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 388.0
YYD1_k127_596680_2 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005599 385.0
YYD1_k127_596680_3 Alpha beta hydrolase K00433 - 1.11.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 310.0
YYD1_k127_596680_4 Haem-degrading - - - 0.00000000000000000000000002395 117.0
YYD1_k127_596680_5 cell adhesion involved in biofilm formation K20276 - - 0.000009576 56.0
YYD1_k127_599715_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1056.0
YYD1_k127_599715_1 Peptidase family M28 - - - 5e-214 678.0
YYD1_k127_599715_2 transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 612.0
YYD1_k127_599715_3 SMP-30/Gluconolaconase/LRE-like region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 506.0
YYD1_k127_599715_4 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 377.0
YYD1_k127_599715_5 esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005089 357.0
YYD1_k127_599715_6 PFAM alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000003376 230.0
YYD1_k127_599715_7 YaeQ - - - 0.0000000000000000000000000000000000000000000000000000000000007436 214.0
YYD1_k127_599715_8 Maleate cis-trans isomerase - - - 0.000000000000000000000000000000000000000000003397 183.0
YYD1_k127_599715_9 Translation initiation factor SUI1 K03113 - - 0.00000000000000000002451 103.0
YYD1_k127_6008064_0 membrane organization K07277,K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 547.0
YYD1_k127_6008064_1 Ion channel - - - 0.000000000000000000000000000000000000000001003 160.0
YYD1_k127_6008064_2 amine dehydrogenase activity - - - 0.00000000000000000000000000004142 131.0
YYD1_k127_6008064_3 Formiminotransferase-cyclodeaminase - - - 0.000000002379 66.0
YYD1_k127_6008064_4 peptidyl-tyrosine sulfation - - - 0.0000006207 59.0
YYD1_k127_6008064_5 - - - - 0.00004811 53.0
YYD1_k127_6011025_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 590.0
YYD1_k127_6011025_1 Isocitrate/isopropylmalate dehydrogenase K07246 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003862,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006108,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009027,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0019752,GO:0036094,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046553,GO:0046872,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.83,1.1.1.93,4.1.1.73 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 504.0
YYD1_k127_6011025_10 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000175 274.0
YYD1_k127_6011025_11 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002219 271.0
YYD1_k127_6011025_12 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001473 232.0
YYD1_k127_6011025_13 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000001845 227.0
YYD1_k127_6011025_14 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000859 197.0
YYD1_k127_6011025_15 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000003498 160.0
YYD1_k127_6011025_16 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000003405 123.0
YYD1_k127_6011025_17 - - - - 0.00000000000000000000000004409 109.0
YYD1_k127_6011025_18 - - - - 0.000000000000000000002309 98.0
YYD1_k127_6011025_19 (FHA) domain - GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944,GO:0097159,GO:1901363 - 0.0000000000000844 74.0
YYD1_k127_6011025_2 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932 472.0
YYD1_k127_6011025_20 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000001123 76.0
YYD1_k127_6011025_3 Transporter associated domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 429.0
YYD1_k127_6011025_4 e3 binding domain K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 428.0
YYD1_k127_6011025_5 Transporter associated domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004174 405.0
YYD1_k127_6011025_6 symporter activity K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 401.0
YYD1_k127_6011025_7 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K11381 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003887 387.0
YYD1_k127_6011025_8 PFAM peptidase S58, DmpA K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007933 329.0
YYD1_k127_6011025_9 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 320.0
YYD1_k127_6013595_0 PFAM Carbamoyltransferase K00612 - - 1.736e-269 841.0
YYD1_k127_6013595_1 chaperone-mediated protein folding K12132 - 2.7.11.1 5.214e-231 746.0
YYD1_k127_6013595_10 RmlD substrate binding domain K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000002191 171.0
YYD1_k127_6013595_11 - - - - 0.00000000000000000000000000004981 121.0
YYD1_k127_6013595_12 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000522 78.0
YYD1_k127_6013595_13 - - - - 0.00000000000002506 79.0
YYD1_k127_6013595_2 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 476.0
YYD1_k127_6013595_3 Thiazole biosynthesis protein ThiG K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005899 378.0
YYD1_k127_6013595_4 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 291.0
YYD1_k127_6013595_5 Putative ATP-binding cassette K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001938 285.0
YYD1_k127_6013595_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001417 270.0
YYD1_k127_6013595_7 Fad dependent oxidoreductase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000004159 263.0
YYD1_k127_6013595_8 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000001001 219.0
YYD1_k127_6013595_9 PFAM transglutaminase domain protein - - - 0.0000000000000000000000000000000000000000000000000000008523 213.0
YYD1_k127_6036810_0 MatE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 594.0
YYD1_k127_6036810_1 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004756 564.0
YYD1_k127_6036810_2 LOR/SDH bifunctional enzyme conserved region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000579 461.0
YYD1_k127_6036810_3 aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 385.0
YYD1_k127_6036810_4 Belongs to the peptidase M48B family K03799 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0031224,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044425,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008484 300.0
YYD1_k127_6036810_5 sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000006545 247.0
YYD1_k127_6036810_6 - - - - 0.0000000000000000000000000000000000000000000002812 182.0
YYD1_k127_6036810_7 response regulator, receiver - - - 0.000000000000000000000000000000004198 130.0
YYD1_k127_6036810_8 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000005586 97.0
YYD1_k127_6036810_9 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.0000002227 61.0
YYD1_k127_6048135_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 542.0
YYD1_k127_6048135_1 Pyrrolo-quinoline quinone - - - 0.000000000000000004005 86.0
YYD1_k127_6051509_0 MacB-like periplasmic core domain - - - 7.225e-308 968.0
YYD1_k127_6051509_1 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000000004277 154.0
YYD1_k127_6051509_2 PQQ-like domain - - - 0.00000000003148 69.0
YYD1_k127_6061893_0 Mismatch repair ATPase (MutS family) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 508.0
YYD1_k127_6061893_1 tryptophan 2,3-dioxygenase activity K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 353.0
YYD1_k127_6061893_2 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001527 262.0
YYD1_k127_6061893_3 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.0000000000000000000000000000000000000000000000000000003312 198.0
YYD1_k127_6061893_4 23S rRNA-intervening sequence protein - - - 0.0000000000000000000001027 104.0
YYD1_k127_6061893_5 Cytochrome c - - - 0.000001141 55.0
YYD1_k127_6066083_0 Methionine synthase K00548 - 2.1.1.13 1.762e-281 879.0
YYD1_k127_6066083_1 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007752 470.0
YYD1_k127_6066083_2 Male sterility protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006104 447.0
YYD1_k127_6066083_3 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 426.0
YYD1_k127_6066083_4 Mitochondrial biogenesis AIM24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 411.0
YYD1_k127_6066083_5 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000009345 258.0
YYD1_k127_6066083_6 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000007284 263.0
YYD1_k127_6066083_7 Sigma-70 region 2 K03088 - - 0.0000000000006599 77.0
YYD1_k127_6066083_8 Acetyltransferase (GNAT) family - - - 0.00004623 53.0
YYD1_k127_6067702_0 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 406.0
YYD1_k127_6067702_1 PFAM Glucose Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006603 301.0
YYD1_k127_6067702_2 - - - - 0.0000000000000000000000000000000000000000000003633 177.0
YYD1_k127_6067702_3 - - - - 0.000000000000000000000000000000006676 143.0
YYD1_k127_6067702_4 Phytoene dehydrogenase K15745 - 1.3.99.30 0.0000000000000000000000000000002232 128.0
YYD1_k127_6067702_5 phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.00004977 55.0
YYD1_k127_6067702_6 PAS fold - - - 0.0007961 48.0
YYD1_k127_6068855_0 lyase activity K11645 GO:0003674,GO:0003824,GO:0004332,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016829,GO:0016830,GO:0016832,GO:0042802,GO:0044424,GO:0044444,GO:0044464 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009154 539.0
YYD1_k127_6068855_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005277 332.0
YYD1_k127_6068855_2 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002633 262.0
YYD1_k127_6068855_3 GDP-mannose mannosyl hydrolase activity K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000024 190.0
YYD1_k127_6068855_4 phosphatidylcholine synthase K01004 - 2.7.8.24 0.0000000000000000000000000000000000000000000000000007104 193.0
YYD1_k127_6068855_5 peptide deformylase activity K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.0000000000000000000000000000000000000000000001685 173.0
YYD1_k127_6068855_6 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000008021 177.0
YYD1_k127_6074072_0 Integrase core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 328.0
YYD1_k127_6074072_1 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003858 270.0
YYD1_k127_6074072_2 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000717 192.0
YYD1_k127_6074072_3 Histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000009946 174.0
YYD1_k127_6074072_4 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000009235 109.0
YYD1_k127_6074072_5 DinB family - - - 0.000000000000000000000001017 112.0
YYD1_k127_6074072_6 - - - - 0.00000000000000002289 94.0
YYD1_k127_6074072_7 - - - - 0.000000005768 64.0
YYD1_k127_6083708_0 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 502.0
YYD1_k127_6083708_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 292.0
YYD1_k127_6083708_2 type I phosphodiesterase nucleotide pyrophosphatase - GO:0003674,GO:0003824,GO:0004035,GO:0004346,GO:0005488,GO:0005575,GO:0005623,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008877,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0046872,GO:0046914,GO:0050308,GO:0050309,GO:0098519 - 0.0000000000000000000000000000000000000000000000000000000000000000000003026 258.0
YYD1_k127_6083708_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000001089 166.0
YYD1_k127_6083708_4 Putative adhesin - - - 0.00000000000000005089 94.0
YYD1_k127_6083708_5 Methyltransferase K07443 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0005488,GO:0005515,GO:0019899,GO:0097159,GO:1901363 - 0.0000000000000000753 83.0
YYD1_k127_6094456_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 521.0
YYD1_k127_6094456_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 486.0
YYD1_k127_6094456_2 Cupin - - - 0.000000000000000000000000000000000000000004253 160.0
YYD1_k127_6094456_3 alpha beta - - - 0.0000000000000000000000004452 122.0
YYD1_k127_6094456_4 Methyltransferase - - - 0.000000000002967 75.0
YYD1_k127_6095768_0 Polysulphide reductase, NrfD K00185 - - 1.772e-198 625.0
YYD1_k127_6095768_1 PFAM Chlorite dismutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002537 270.0
YYD1_k127_6095768_2 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000009942 250.0
YYD1_k127_6110677_0 DNA topological change K03168 - 5.99.1.2 2.304e-203 661.0
YYD1_k127_6110677_1 - - - - 0.00000000000000000000000000000000000000000000000000000004966 214.0
YYD1_k127_6110677_2 - - - - 0.000000000001708 70.0
YYD1_k127_6113533_0 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003695 417.0
YYD1_k127_6113533_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004805 415.0
YYD1_k127_6113533_2 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 359.0
YYD1_k127_6113533_3 RNA pseudouridylate synthase K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008158 327.0
YYD1_k127_6113533_4 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 302.0
YYD1_k127_6113533_5 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002793 281.0
YYD1_k127_6113533_6 NHL repeat - - - 0.00000000000000000000000000000000000000000001422 173.0
YYD1_k127_6113533_7 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000009863 131.0
YYD1_k127_6113533_9 - - - - 0.00000005823 60.0
YYD1_k127_6115087_0 - - - - 0.000000000000000000000000000000000006237 152.0
YYD1_k127_6115087_2 Neutral/alkaline non-lysosomal ceramidase, N-terminal - - - 0.00000000000000000003596 90.0
YYD1_k127_6115087_3 allophanate hydrolase subunit 2 K01941,K06350 - 6.3.4.6 0.0000000000000003964 88.0
YYD1_k127_6115087_4 - - - - 0.000000000000808 74.0
YYD1_k127_6115087_5 - - - - 0.00002912 56.0
YYD1_k127_6132633_0 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005875 580.0
YYD1_k127_6132633_1 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006882 243.0
YYD1_k127_6132633_2 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000003296 235.0
YYD1_k127_6132633_3 Uncharacterised protein family UPF0066 - - - 0.00000000000000000000000000000000000000000000000000006131 195.0
YYD1_k127_6132633_4 - - - - 0.00000000000000000000000000000000000000000005994 169.0
YYD1_k127_6132633_5 - - - - 0.000000000000000000000000002976 116.0
YYD1_k127_6132633_6 - - - - 0.00000000000000000000000006387 112.0
YYD1_k127_6132633_7 - - - - 0.0000000000000005892 87.0
YYD1_k127_6140088_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1108.0
YYD1_k127_6140088_1 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.398e-216 688.0
YYD1_k127_6140088_2 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000006731 262.0
YYD1_k127_6140088_3 Cobalamin B12-binding K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000009841 199.0
YYD1_k127_6140088_4 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000001447 154.0
YYD1_k127_6140088_5 Squalene/phytoene synthase K00801 - 2.5.1.21 0.00000308 57.0
YYD1_k127_6144581_0 amino acid K03294 - - 6.543e-212 668.0
YYD1_k127_6144581_1 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006479 610.0
YYD1_k127_6144581_10 Tetratricopeptide repeat - - - 0.00000000001143 71.0
YYD1_k127_6144581_12 Assembly K02663 - - 0.0001407 48.0
YYD1_k127_6144581_2 Secretin and TonB N terminus short domain K02666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 373.0
YYD1_k127_6144581_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006756 318.0
YYD1_k127_6144581_4 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003465 286.0
YYD1_k127_6144581_5 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000007276 147.0
YYD1_k127_6144581_6 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000006914 127.0
YYD1_k127_6144581_7 protein contain chitin-binding domain type 3 K01183,K21606 - 3.2.1.14,3.2.1.202 0.00000000000000000001503 103.0
YYD1_k127_6144581_9 PFAM Pilus assembly protein PilO K02664 - - 0.0000000000000000004221 94.0
YYD1_k127_6148614_0 Amidohydrolase family - - - 1.226e-204 648.0
YYD1_k127_6148614_1 Cytosine deaminase and related metal-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 474.0
YYD1_k127_6148614_10 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.000008518 51.0
YYD1_k127_6148614_2 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007034 329.0
YYD1_k127_6148614_3 PFAM SMP-30 Gluconolaconase LRE domain protein K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000001709 259.0
YYD1_k127_6148614_4 TipAS antibiotic-recognition domain K21744 - - 0.000000000000000000000000000000000000000000000000000000000000000001846 235.0
YYD1_k127_6148614_5 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000003809 231.0
YYD1_k127_6148614_6 endonuclease activity K07451 - - 0.00000000000000000000000000000000000000000006546 174.0
YYD1_k127_6148614_7 Mo-co oxidoreductase dimerisation domain K17225 - - 0.000000000000000001991 93.0
YYD1_k127_6148614_8 SnoaL-like domain - - - 0.0000000264 63.0
YYD1_k127_6148614_9 SnoaL-like domain - - - 0.0000002764 62.0
YYD1_k127_6150697_0 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004241 449.0
YYD1_k127_6150697_1 Domain of unknown function (DUF305) - - - 0.0000000000000000000000000000000000000000000000000000000000009509 216.0
YYD1_k127_6150697_2 Protein of unknown function (DUF3105) - - - 0.000000000000000000000000000000000000000000000000000001108 198.0
YYD1_k127_6150697_3 Prokaryotic cytochrome b561 - - - 0.0000000000000000001142 97.0
YYD1_k127_6154692_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 356.0
YYD1_k127_6154692_1 PFAM peptidase K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 335.0
YYD1_k127_6154692_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 332.0
YYD1_k127_6154692_3 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001281 274.0
YYD1_k127_6154692_4 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000008758 121.0
YYD1_k127_6154692_5 Cytochrome c - - - 0.000000000000000000000000005716 115.0
YYD1_k127_6154692_6 MacB-like periplasmic core domain - - - 0.00000000000000000000000007559 114.0
YYD1_k127_6154692_7 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K06187,K09747 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - 0.0000000000000000000000004289 107.0
YYD1_k127_6154692_8 Domain of unknown function (DUF4203) - - - 0.000314 51.0
YYD1_k127_6170846_0 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 457.0
YYD1_k127_6170846_1 beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 350.0
YYD1_k127_6170846_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003104 281.0
YYD1_k127_6170846_3 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005445 280.0
YYD1_k127_6170846_4 Esterase PHB depolymerase K03932 - - 0.0000000000000000000000000000000000000000000001943 183.0
YYD1_k127_6171458_0 major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 402.0
YYD1_k127_6171458_1 Major Facilitator Superfamily K08191 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007766 302.0
YYD1_k127_6171458_2 Tetratricopeptide repeat K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000004099 241.0
YYD1_k127_6171458_3 PFAM Stage II sporulation E family protein K01079,K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000003835 237.0
YYD1_k127_6171458_4 PIN domain - - - 0.00000000000000000000000000000000000001009 149.0
YYD1_k127_6171458_5 Crp-like helix-turn-helix domain K10914 - - 0.000000000000000000008067 102.0
YYD1_k127_6171458_6 positive regulation of growth - - - 0.0000002241 59.0
YYD1_k127_6175777_0 AcrB/AcrD/AcrF family - - - 1.62e-215 685.0
YYD1_k127_6175777_1 Sodium/hydrogen exchanger family K03316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009006 615.0
YYD1_k127_6175777_2 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 406.0
YYD1_k127_6175777_3 pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 396.0
YYD1_k127_6175777_4 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 299.0
YYD1_k127_6175777_5 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003128 263.0
YYD1_k127_6175777_6 Bacterial PH domain K08981 - - 0.0000000000000000000000000000000000000000000000000000000000000005718 240.0
YYD1_k127_6175777_7 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000003827 209.0
YYD1_k127_6175777_8 Bacterial PH domain K09167 - - 0.00000000000000000006483 96.0
YYD1_k127_6175777_9 Divergent 4Fe-4S mono-cluster K05337 - - 0.00000000000001832 76.0
YYD1_k127_6176071_0 ASPIC and UnbV - - - 3.736e-246 782.0
YYD1_k127_6176071_1 Copper binding periplasmic protein CusF K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001232 274.0
YYD1_k127_6176071_2 SMI1 / KNR4 family - - - 0.0000000000000000000000000000000000000000000000000000000000001352 216.0
YYD1_k127_6176071_3 Domain of unknown function (DUF4160) - - - 0.00000000000000000000000000000002081 127.0
YYD1_k127_6176071_4 Protein of unknown function (DUF2442) - - - 0.0000000000000000000000001104 109.0
YYD1_k127_6176071_5 von Willebrand factor (vWF) type A domain K07114,K12511 - - 0.0001232 53.0
YYD1_k127_6176071_6 shikimate kinase activity K00891,K13829 - 2.7.1.71,4.2.3.4 0.0004793 45.0
YYD1_k127_6180376_0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 3.529e-233 742.0
YYD1_k127_6180376_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004017 576.0
YYD1_k127_6180376_2 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006727 435.0
YYD1_k127_6180376_3 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 394.0
YYD1_k127_6180376_4 Domain of unknown function (DUF892) - - - 0.00000000000000000000000000000000000000000002621 168.0
YYD1_k127_6180376_5 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000002806 121.0
YYD1_k127_6180376_6 - - - - 0.000000000000000000001453 106.0
YYD1_k127_6180376_7 Periplasmic or secreted lipoprotein - - - 0.000000000000003653 84.0
YYD1_k127_6180376_8 - - - - 0.000000000001044 73.0
YYD1_k127_6186442_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 3.036e-305 949.0
YYD1_k127_6186442_1 Carboxypeptidase regulatory-like domain - - - 7.625e-217 710.0
YYD1_k127_6186442_2 sulphate transporter - - - 1.874e-216 686.0
YYD1_k127_6186442_3 Glucose-6-phosphate dehydrogenase, NAD binding domain K00036 - 1.1.1.363,1.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 586.0
YYD1_k127_6188830_0 Short chain fatty acid transporter K02106 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006133 501.0
YYD1_k127_6188830_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 401.0
YYD1_k127_6188830_2 Zinc dependent phospholipase C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 385.0
YYD1_k127_6188830_3 binds to the 23S rRNA K02939 - - 0.00000000000000000000000000000000000000002455 156.0
YYD1_k127_6188830_4 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000000000000002363 94.0
YYD1_k127_6188830_5 TIGRFAM TonB family protein K03832 - - 0.000000000000000003072 93.0
YYD1_k127_6188830_6 Methyltransferase domain - - - 0.0009548 51.0
YYD1_k127_6190289_0 Insulinase (Peptidase family M16) K07263 - - 0.0 1029.0
YYD1_k127_6190289_1 Glycosyltransferase family 20 K16055 - 2.4.1.15,3.1.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548 572.0
YYD1_k127_6190289_2 acyl-CoA transferase carnitine dehydratase K18702 - 2.8.3.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 422.0
YYD1_k127_6190289_3 PFAM Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000008578 236.0
YYD1_k127_6190289_4 Pyridoxal-phosphate dependent enzyme K12339 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000036 222.0
YYD1_k127_6190289_5 endonuclease III K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000001114 195.0
YYD1_k127_6190289_6 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.000000000000000000000000000000001826 140.0
YYD1_k127_6190289_7 PFAM ATP-binding region, ATPase domain protein K02486 - 2.7.13.3 0.000000000000000000000000000000003143 145.0
YYD1_k127_6190289_8 - - - - 0.0004983 49.0
YYD1_k127_6197622_0 TonB-dependent receptor - - - 4.133e-209 689.0
YYD1_k127_6197622_1 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000103 295.0
YYD1_k127_6197622_2 phosphoprotein phosphatase activity K14680 - 6.5.1.3 0.00000000000000000000000000000000000000000001482 173.0
YYD1_k127_6197622_3 cAMP biosynthetic process - - - 0.00001332 55.0
YYD1_k127_6198484_0 ASPIC and UnbV - - - 7.2e-268 869.0
YYD1_k127_6198484_1 PQQ-like domain K05889 - 1.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 528.0
YYD1_k127_6198484_2 Copper binding periplasmic protein CusF K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001182 266.0
YYD1_k127_6198484_3 lactoylglutathione lyase activity K03088 - - 0.000000000000000000000000000000000000000000000000000000002734 209.0
YYD1_k127_6198484_4 Animal haem peroxidase - - - 0.000000000000000000000000000000001836 135.0
YYD1_k127_6198484_5 NADH flavin oxidoreductase NADH oxidase K00317 - 1.5.8.1,1.5.8.2 0.000001773 51.0
YYD1_k127_6199341_0 Epoxide hydrolase N terminus K01253,K21159 - 3.3.2.9 6.827e-229 717.0
YYD1_k127_6199341_1 Epoxide hydrolase N terminus K21159 - - 1.684e-201 638.0
YYD1_k127_6199341_10 Carbon-nitrogen hydrolase K01502 - 3.5.5.7 0.00000000000000000000000000000005053 124.0
YYD1_k127_6199341_12 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01502 - 3.5.5.7 0.000000000002001 78.0
YYD1_k127_6199341_13 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000003037 53.0
YYD1_k127_6199341_14 AhpC/TSA family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000007822 48.0
YYD1_k127_6199341_2 epoxide hydrolase K01253,K21159 - 3.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005259 590.0
YYD1_k127_6199341_3 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 520.0
YYD1_k127_6199341_4 Oxidoreductase FAD-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 335.0
YYD1_k127_6199341_5 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002897 272.0
YYD1_k127_6199341_6 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000003893 241.0
YYD1_k127_6199341_7 Protein of unknown function (DUF861) - - - 0.0000000000000000000000000000000000000000000000009399 175.0
YYD1_k127_6199341_8 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K00851,K01057 - 2.7.1.12,3.1.1.31 0.0000000000000000000000000000000000413 139.0
YYD1_k127_6199341_9 Carbon-nitrogen hydrolase K01502 - 3.5.5.7 0.00000000000000000000000000000003373 128.0
YYD1_k127_6214058_0 belongs to the thioredoxin family K05838 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 456.0
YYD1_k127_6214058_1 transcriptional regulator K02624 - - 0.000000000000000000000000000000000000000000000000000000000000000000002963 248.0
YYD1_k127_6214058_2 TonB-dependent receptor - - - 0.00000000000000000000000000001299 134.0
YYD1_k127_6214058_3 Tetratricopeptide TPR_2 repeat protein - - - 0.0000008644 58.0
YYD1_k127_6217518_0 Catalyzes the conversion of dihydroorotate to orotate K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005783 349.0
YYD1_k127_6217518_1 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000002519 226.0
YYD1_k127_6217518_2 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000202 213.0
YYD1_k127_6217518_3 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( K02823 - - 0.0000000000000000000000000000000000000000000001702 180.0
YYD1_k127_6217518_4 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000004069 130.0
YYD1_k127_6217518_5 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000185 62.0
YYD1_k127_6245751_0 FtsX-like permease family - - - 1.871e-204 676.0
YYD1_k127_6245751_1 COG1012 NAD-dependent aldehyde - - - 3.793e-198 627.0
YYD1_k127_6245751_10 O-methyltransferase - - - 0.000000000000000000000000000006486 129.0
YYD1_k127_6245751_11 Scramblase - - - 0.0000000000000000000003442 98.0
YYD1_k127_6245751_12 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000001011 89.0
YYD1_k127_6245751_13 Glycosyl transferase family 41 - - - 0.00000002682 66.0
YYD1_k127_6245751_14 von Willebrand factor, type A K07114 - - 0.0000002523 62.0
YYD1_k127_6245751_2 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 546.0
YYD1_k127_6245751_3 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 529.0
YYD1_k127_6245751_4 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 360.0
YYD1_k127_6245751_5 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 329.0
YYD1_k127_6245751_6 transmembrane transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005135 323.0
YYD1_k127_6245751_7 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K02003,K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001011 249.0
YYD1_k127_6245751_8 NmrA-like family - - - 0.00000000000000000000000000000000000000002859 171.0
YYD1_k127_6245751_9 Protein of unknown function (DUF1282) - - - 0.000000000000000000000000000005656 126.0
YYD1_k127_6260655_0 DNA topological change K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004506 394.0
YYD1_k127_6260655_1 DNA topological change K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008788 371.0
YYD1_k127_6260655_2 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 333.0
YYD1_k127_6260655_3 ankyrin repeat K15503 - - 0.0000000000000000000000000000000000000000000000000000000000003323 232.0
YYD1_k127_6260655_4 PFAM Prenyltransferase squalene oxidase K06015 - 3.5.1.81 0.0000000000000000000001553 113.0
YYD1_k127_6264490_0 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 423.0
YYD1_k127_6264490_1 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 391.0
YYD1_k127_6264490_2 response to abiotic stimulus K06867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001246 274.0
YYD1_k127_6264490_3 Bacterial extracellular solute-binding protein K02020,K22003 - 5.3.3.7 0.000000000000000000000000000000000000002812 155.0
YYD1_k127_6264490_4 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000001973 151.0
YYD1_k127_6264490_5 transport - - - 0.00005886 56.0
YYD1_k127_6268949_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 1.447e-258 809.0
YYD1_k127_6268949_1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006318 405.0
YYD1_k127_6268949_2 MoeA N-terminal region (domain I and II) K03750,K07219 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 399.0
YYD1_k127_6268949_3 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.00000000000000000000000000000000000000000000000002876 188.0
YYD1_k127_6268949_4 PFAM IstB domain protein ATP-binding protein - - - 0.0004608 48.0
YYD1_k127_6271910_0 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008709 551.0
YYD1_k127_6271910_1 electron transfer activity K00428 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000003569 260.0
YYD1_k127_6271910_2 GDSL-like Lipase/Acylhydrolase family - - - 0.00000000000000000000000000000349 132.0
YYD1_k127_6279243_0 Transport of potassium into the cell K03549 - - 1.242e-228 724.0
YYD1_k127_6279243_1 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007589 244.0
YYD1_k127_6279243_2 transcriptional regulator K07667 - - 0.000000000000000000000000000000000000000000000000000000000000000001939 236.0
YYD1_k127_6279243_3 Histidine kinase K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000003771 227.0
YYD1_k127_6279243_4 PFAM lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000009386 191.0
YYD1_k127_6279243_5 manganese ion transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000006228 196.0
YYD1_k127_6279243_6 Hemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000000000000000000000000042 150.0
YYD1_k127_6279243_7 Penicillinase repressor - - - 0.00000000000000000000000007576 120.0
YYD1_k127_6279243_8 BlaR1 peptidase M56 - - - 0.0000000000000000000000007381 121.0
YYD1_k127_6287172_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 302.0
YYD1_k127_6287172_1 Two component, sigma54 specific, transcriptional regulator, Fis family K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001914 281.0
YYD1_k127_6287172_2 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02236,K02278,K02506,K02654,K10966 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000002981 235.0
YYD1_k127_6287172_3 ABC-type transport system involved in multi-copper enzyme maturation, permease component - - - 0.00000000000000000000000000000000000000000000000007079 191.0
YYD1_k127_6287172_4 PAS fold K07710 GO:0000155,GO:0000160,GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0017076,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.13.3 0.0000000000000000000000000000000000000000001137 177.0
YYD1_k127_6287172_5 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000757 168.0
YYD1_k127_6287172_6 Pfam:N_methyl_2 - - - 0.0000000000000000002864 96.0
YYD1_k127_6287172_7 Pfam:N_methyl_2 - - - 0.000000000000006663 83.0
YYD1_k127_6287172_8 DSBA oxidoreductase - - - 0.0000000001539 73.0
YYD1_k127_6294372_0 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 504.0
YYD1_k127_6294372_1 serine-type peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005021 415.0
YYD1_k127_6294372_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 353.0
YYD1_k127_6294372_3 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000002745 231.0
YYD1_k127_6294372_4 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000002751 210.0
YYD1_k127_6294372_5 solute binding protein K02035 - - 0.00002377 55.0
YYD1_k127_6296958_0 - - - - 4.785e-292 914.0
YYD1_k127_6296958_1 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 547.0
YYD1_k127_6296958_10 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0000726,GO:0003674,GO:0003824,GO:0003906,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0008833,GO:0009987,GO:0016787,GO:0016788,GO:0016888,GO:0016893,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 3.1.21.2 0.000000000000000000000000003666 114.0
YYD1_k127_6296958_11 Copper binding periplasmic protein CusF K07152 - - 0.0000005163 55.0
YYD1_k127_6296958_2 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 439.0
YYD1_k127_6296958_3 poly(3-hydroxybutyrate) depolymerase activity K07019 GO:0003674,GO:0003824,GO:0006629,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0044237,GO:0044238,GO:0044255,GO:0071704 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 295.0
YYD1_k127_6296958_4 ATPase activity K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002418 249.0
YYD1_k127_6296958_5 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000177 234.0
YYD1_k127_6296958_6 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000002807 157.0
YYD1_k127_6296958_7 Lipase (class 3) K01046 - 3.1.1.3 0.00000000000000000000000000000000004646 147.0
YYD1_k127_6296958_8 Phospholipid methyltransferase - - - 0.00000000000000000000000000000000009325 150.0
YYD1_k127_6296958_9 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000003047 149.0
YYD1_k127_6303859_0 ABC transporter transmembrane region K11085 - - 1.289e-215 684.0
YYD1_k127_6303859_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 353.0
YYD1_k127_6303859_2 Universal stress protein - - - 0.00000000000000000000000008059 115.0
YYD1_k127_6303859_3 TIGRFAM TonB K03832 - - 0.00000000000000000007699 102.0
YYD1_k127_6303859_4 Cytochrome C' - - - 0.00000002615 63.0
YYD1_k127_6310069_0 phosphatase activity - - - 1.433e-208 668.0
YYD1_k127_6310069_1 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008029 481.0
YYD1_k127_6310069_10 COG2010 Cytochrome c, mono- and diheme variants - - - 0.00000000000000000008654 100.0
YYD1_k127_6310069_11 Universal stress protein family - - - 0.00000000000002097 84.0
YYD1_k127_6310069_12 COG0589 Universal stress protein UspA and related K14055 - - 0.0002475 49.0
YYD1_k127_6310069_2 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003325 461.0
YYD1_k127_6310069_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005805 302.0
YYD1_k127_6310069_4 bacterial OsmY and nodulation domain - - - 0.00000000000000000000000000000000000000000000002269 178.0
YYD1_k127_6310069_5 VIT family - - - 0.000000000000000000000000000000000001685 146.0
YYD1_k127_6310069_6 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000000000000000000002131 121.0
YYD1_k127_6310069_7 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00000000000000000000000007344 121.0
YYD1_k127_6310069_8 PFAM OsmC family protein - - - 0.0000000000000000000000001017 112.0
YYD1_k127_6310069_9 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000171 105.0
YYD1_k127_6314419_0 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008238 340.0
YYD1_k127_6314419_1 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000003971 238.0
YYD1_k127_6314419_2 high-affinity ferrous iron transmembrane transporter activity K07243 - - 0.000000000000000000000000000000000000000007524 161.0
YYD1_k127_6314419_3 Membrane - - - 0.00000000000000000000000000000000000006208 156.0
YYD1_k127_6314419_4 DNA-sulfur modification-associated - - - 0.00000000000000000004529 102.0
YYD1_k127_6314419_5 PFAM OsmC family protein K07397 - - 0.000000000000000000293 92.0
YYD1_k127_6319966_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 2.027e-250 799.0
YYD1_k127_6319966_1 COG0076 Glutamate decarboxylase and related PLP-dependent K01593 - 4.1.1.105,4.1.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000413 578.0
YYD1_k127_6319966_10 von Willebrand factor, type A K07114,K12511 - - 0.000000000000000000000006575 117.0
YYD1_k127_6319966_11 TIGRFAM TonB family K03832 - - 0.00000000000000002238 93.0
YYD1_k127_6319966_12 Bacterial-like globin K06886 - - 0.00000003844 55.0
YYD1_k127_6319966_13 - - - - 0.0000005562 63.0
YYD1_k127_6319966_14 phosphoprotein phosphatase activity K14680 - 6.5.1.3 0.0002532 48.0
YYD1_k127_6319966_15 COG3209 Rhs family protein - - - 0.0002551 49.0
YYD1_k127_6319966_2 Cupin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 475.0
YYD1_k127_6319966_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005717 422.0
YYD1_k127_6319966_4 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 388.0
YYD1_k127_6319966_5 dihydroorotate dehydrogenase activity K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 323.0
YYD1_k127_6319966_6 Haem-degrading - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006472 299.0
YYD1_k127_6319966_7 N-acetylglucosaminylinositol deacetylase activity K22135 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009328 291.0
YYD1_k127_6319966_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006765 273.0
YYD1_k127_6319966_9 - - - - 0.0000000000000000000000000000000000000000000000000000000002128 209.0
YYD1_k127_6329402_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 449.0
YYD1_k127_6329402_1 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004199 279.0
YYD1_k127_6329402_2 Spore coat protein CotH - - - 0.0000000000000000000000000000000000000000000000000000000281 219.0
YYD1_k127_6329402_3 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000004606 188.0
YYD1_k127_6329402_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000003826 139.0
YYD1_k127_6329402_5 - - - - 0.00000000000000000000000002901 124.0
YYD1_k127_6329402_6 Phosphate-selective porin O and P K07221 - - 0.0000000000005812 81.0
YYD1_k127_6348077_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 5.281e-253 808.0
YYD1_k127_6348077_1 Belongs to the metal hydrolase YfiT family - - - 0.00000000000000000000000000000000000000000000000000000000001076 212.0
YYD1_k127_6348077_2 domain protein K14194 - - 0.000000000000000000000000000000000000000000000000001228 204.0
YYD1_k127_6348077_3 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000001483 146.0
YYD1_k127_6348077_4 BMC - - - 0.000000000000000000000000000002044 124.0
YYD1_k127_6348077_5 - - - - 0.000000000000000000000000002442 119.0
YYD1_k127_6348077_7 - - - - 0.00002906 52.0
YYD1_k127_636228_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 571.0
YYD1_k127_636228_1 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 340.0
YYD1_k127_636228_2 DNA topological change K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000004104 184.0
YYD1_k127_636228_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000002059 123.0
YYD1_k127_636228_4 domain-containing protein K16726 GO:0000785,GO:0001568,GO:0001654,GO:0001745,GO:0001751,GO:0001754,GO:0001817,GO:0001819,GO:0001944,GO:0001955,GO:0002376,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002831,GO:0002833,GO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005694,GO:0005737,GO:0006275,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007005,GO:0007010,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007346,GO:0007399,GO:0007423,GO:0007492,GO:0008150,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009887,GO:0009888,GO:0009889,GO:0009892,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009987,GO:0010506,GO:0010507,GO:0010556,GO:0010564,GO:0010639,GO:0010646,GO:0010647,GO:0010821,GO:0010823,GO:0010927,GO:0010941,GO:0012505,GO:0016020,GO:0016043,GO:0019219,GO:0019222,GO:0019730,GO:0019899,GO:0019900,GO:0019901,GO:0021700,GO:0022008,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030036,GO:0030154,GO:0030182,GO:0030239,GO:0031032,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031329,GO:0031330,GO:0031347,GO:0031349,GO:0031430,GO:0031672,GO:0031674,GO:0031965,GO:0031967,GO:0031975,GO:0032101,GO:0032103,GO:0032501,GO:0032502,GO:0032989,GO:0033043,GO:0039531,GO:0039533,GO:0039535,GO:0040011,GO:0042692,GO:0042742,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043122,GO:0043123,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043292,GO:0043900,GO:0043902,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044449,GO:0044464,GO:0045087,GO:0045088,GO:0045089,GO:0045214,GO:0045595,GO:0045596,GO:0045787,GO:0045931,GO:0046530,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048592,GO:0048646,GO:0048699,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0050688,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051093,GO:0051128,GO:0051129,GO:0051146,GO:0051147,GO:0051148,GO:0051150,GO:0051151,GO:0051171,GO:0051239,GO:0051240,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0055001,GO:0055002,GO:0060255,GO:0060361,GO:0060548,GO:0061061,GO:0065007,GO:0070925,GO:0071695,GO:0071840,GO:0072358,GO:0072359,GO:0080090,GO:0080134,GO:0090068,GO:0090596,GO:0097435,GO:0098542,GO:0099080,GO:0099081,GO:0099512,GO:1900087,GO:1900245,GO:1900246,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902531,GO:1902533,GO:1902806,GO:1902808,GO:1903146,GO:1903147,GO:2000045,GO:2000112 - 0.00000000000000000000000000001324 135.0
YYD1_k127_636228_5 Redoxin K03564 - 1.11.1.15 0.0000000001615 65.0
YYD1_k127_6363014_0 Malate synthase K01638 - 2.3.3.9 2.523e-299 939.0
YYD1_k127_6363014_1 cAMP biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 336.0
YYD1_k127_6363014_10 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000004285 102.0
YYD1_k127_6363014_11 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000006189 99.0
YYD1_k127_6363014_12 COG0500 SAM-dependent methyltransferases - - - 0.000000000000006153 83.0
YYD1_k127_6363014_13 RDD family - - - 0.0000000642 61.0
YYD1_k127_6363014_14 Protein kinase domain K12132 - 2.7.11.1 0.0000003622 52.0
YYD1_k127_6363014_2 amine dehydrogenase activity K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 314.0
YYD1_k127_6363014_3 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008147 314.0
YYD1_k127_6363014_4 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000000007353 201.0
YYD1_k127_6363014_5 oxidation-reduction process - - - 0.000000000000000000000000000000000000000000000006794 174.0
YYD1_k127_6363014_6 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000009764 191.0
YYD1_k127_6363014_7 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000000000000000000000000000000002 155.0
YYD1_k127_6363014_8 Methyltransferase type 11 - - - 0.000000000000000000000000002103 121.0
YYD1_k127_6363014_9 - - - - 0.0000000000000000000001998 107.0
YYD1_k127_6368325_0 Sigma factor PP2C-like phosphatases - - - 0.0 1044.0
YYD1_k127_6372750_0 N-acetyldiaminopimelate deacetylase activity K12941 - - 1.013e-228 719.0
YYD1_k127_6372750_1 peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 376.0
YYD1_k127_6372750_10 Glycosyl hydrolases family 18 K01183 - 3.2.1.14 0.0005 48.0
YYD1_k127_6372750_2 dTDP biosynthetic process K00560,K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.1.1.45,2.7.4.9,4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 347.0
YYD1_k127_6372750_3 Calcineurin-like phosphoesterase K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 295.0
YYD1_k127_6372750_4 Spore coat protein CotH - - - 0.0000000000000000000000000000000000000000000000000000000000000000191 241.0
YYD1_k127_6372750_5 PLD-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000002791 226.0
YYD1_k127_6372750_6 phosphate-selective porin O and P K07221 - - 0.000000000000000000000000000000000000000000003514 181.0
YYD1_k127_6372750_7 Bacterial extracellular solute-binding protein K02020,K22003 - 5.3.3.7 0.0000000000000000000000000000000001018 147.0
YYD1_k127_6372750_8 dTDP biosynthetic process K00560,K00943 - 2.1.1.45,2.7.4.9 0.000000000000000000000000003135 121.0
YYD1_k127_6372750_9 Domain of unknown function (DUF4956) - - - 0.00000000000003078 85.0
YYD1_k127_6389934_0 competence protein COMEC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004645 371.0
YYD1_k127_6389934_1 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 333.0
YYD1_k127_6389934_2 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 307.0
YYD1_k127_6389934_3 PFAM Ankyrin repeat K06867 - - 0.0000000000000000000000000000001688 142.0
YYD1_k127_6389934_4 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000003486 121.0
YYD1_k127_6389934_5 AraC-like ligand binding domain - - - 0.000000000000000000000107 104.0
YYD1_k127_6389934_6 YjbR - - - 0.000000000000000000007513 96.0
YYD1_k127_6389934_7 Putative cyclase - - - 0.000000000004089 73.0
YYD1_k127_6389934_8 Metallo-beta-lactamase superfamily - - - 0.00000000007788 72.0
YYD1_k127_6389934_9 - - - - 0.0000179 53.0
YYD1_k127_6395811_0 DNA topological change K03168 - 5.99.1.2 2.281e-227 733.0
YYD1_k127_6395811_1 Methionine synthase K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 461.0
YYD1_k127_6395811_2 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 398.0
YYD1_k127_6395811_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K15242,K15975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006796 328.0
YYD1_k127_6395811_4 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000005514 230.0
YYD1_k127_6395811_5 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000004497 171.0
YYD1_k127_6395811_6 PFAM TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000004195 140.0
YYD1_k127_6395811_7 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.000000000000000000000001855 121.0
YYD1_k127_6409565_0 Carboxypeptidase regulatory-like domain - - - 5.567e-210 692.0
YYD1_k127_6409565_1 Amidohydrolase K10221 - 3.1.1.57 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 551.0
YYD1_k127_6409565_10 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000001073 160.0
YYD1_k127_6409565_2 Gentisate 1,2-dioxygenase K00450 - 1.13.11.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 474.0
YYD1_k127_6409565_3 Sugar (and other) transporter K08195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009887 445.0
YYD1_k127_6409565_4 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 429.0
YYD1_k127_6409565_5 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004751 381.0
YYD1_k127_6409565_6 Catalyzes the conversion of maleate to fumarate K01799 - 5.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008036 350.0
YYD1_k127_6409565_7 Oxidoreductase family, NAD-binding Rossmann fold K10219 - 1.1.1.312 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 319.0
YYD1_k127_6409565_8 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 309.0
YYD1_k127_6409565_9 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 299.0
YYD1_k127_6418444_0 Tripartite tricarboxylate transporter TctA family K07793 - - 1.372e-199 632.0
YYD1_k127_6418444_1 FAD dependent oxidoreductase K13796 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 609.0
YYD1_k127_6418444_2 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000582 543.0
YYD1_k127_6418444_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004167 337.0
YYD1_k127_6418444_4 Tripartite tricarboxylate transporter family receptor K07795 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 336.0
YYD1_k127_6418444_5 utilization protein B K13795 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 295.0
YYD1_k127_6418444_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000472 252.0
YYD1_k127_6418444_7 conserved protein - - - 0.000000000000000000000000000000000000000000001394 172.0
YYD1_k127_6418444_8 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000003036 141.0
YYD1_k127_6419449_0 ABC transporter transmembrane region K11085 - - 2.169e-204 648.0
YYD1_k127_6419449_1 glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005033 435.0
YYD1_k127_6419449_2 O-methyltransferase K09846 - 2.1.1.210 0.000000000000000001239 93.0
YYD1_k127_6426748_0 Belongs to the TPP enzyme family K01576,K01652 - 2.2.1.6,4.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 396.0
YYD1_k127_6426748_1 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001106 241.0
YYD1_k127_6426748_2 Esterase of the alpha-beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000000000000000003512 226.0
YYD1_k127_6426748_3 Dehydrogenase K17760 - 1.1.9.1 0.0000000000000002363 83.0
YYD1_k127_6426748_4 Cytochrome c K17760 - 1.1.9.1 0.000000000157 67.0
YYD1_k127_6436112_0 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 484.0
YYD1_k127_6436112_1 - - - - 0.0000000002467 64.0
YYD1_k127_6446047_0 Domain of unknown function (DUF5117) - - - 3.454e-306 960.0
YYD1_k127_6446047_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 571.0
YYD1_k127_6446047_10 Amidase K01426 - 3.5.1.4 0.00000004052 54.0
YYD1_k127_6446047_11 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0003289 53.0
YYD1_k127_6446047_2 phosphorelay sensor kinase activity K07709,K07710 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 444.0
YYD1_k127_6446047_3 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 384.0
YYD1_k127_6446047_4 Methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 376.0
YYD1_k127_6446047_5 surface antigen K07277 - - 0.00000000000000000000000000000000000000000000000000000000000697 227.0
YYD1_k127_6446047_6 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000002459 191.0
YYD1_k127_6446047_7 - - - - 0.00000000000000000000000001014 124.0
YYD1_k127_6446047_8 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000019 108.0
YYD1_k127_6449162_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC - - - 2.706e-232 734.0
YYD1_k127_6449162_1 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000003826 181.0
YYD1_k127_6449162_2 Haem-binding domain - - - 0.000000000000000000000000000000000000000000003829 168.0
YYD1_k127_6449162_3 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000007209 165.0
YYD1_k127_644983_0 Transport of potassium into the cell K03549 - - 3.131e-238 751.0
YYD1_k127_644983_1 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000762 461.0
YYD1_k127_644983_2 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000001717 232.0
YYD1_k127_644983_3 Histidine kinase K07646 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000004414 250.0
YYD1_k127_644983_4 Response regulator receiver K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000009981 240.0
YYD1_k127_644983_5 Four helix bundle sensory module for signal transduction - - - 0.0000000000000000000000000000002072 136.0
YYD1_k127_6455359_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791,K13019 - 5.1.3.14,5.1.3.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 439.0
YYD1_k127_6455359_1 PFAM SMP-30 Gluconolaconase K08685,K14274 GO:0003674,GO:0003824,GO:0004341,GO:0005488,GO:0005509,GO:0005575,GO:0005576,GO:0005975,GO:0005996,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016051,GO:0016053,GO:0016787,GO:0016788,GO:0019752,GO:0019852,GO:0019853,GO:0042364,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046364,GO:0046394,GO:0046872,GO:0051186,GO:0051188,GO:0052689,GO:0071704,GO:1901576 1.4.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 426.0
YYD1_k127_6455359_10 - - - - 0.00000000000000000000000007254 110.0
YYD1_k127_6455359_11 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000017 98.0
YYD1_k127_6455359_12 - - - - 0.0000000000005972 79.0
YYD1_k127_6455359_13 Tricorn protease homolog K08676 - - 0.00000000001178 78.0
YYD1_k127_6455359_15 MacB-like periplasmic core domain - - - 0.0007132 48.0
YYD1_k127_6455359_2 PFAM DegT DnrJ EryC1 StrS aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 380.0
YYD1_k127_6455359_3 PFAM oxidoreductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 353.0
YYD1_k127_6455359_4 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 342.0
YYD1_k127_6455359_5 response to abiotic stimulus K06867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 304.0
YYD1_k127_6455359_6 transferase hexapeptide K13018 - 2.3.1.201 0.0000000000000000000000000000000000000000000000000000000000000000001018 239.0
YYD1_k127_6455359_7 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000001364 161.0
YYD1_k127_6455359_8 Glycosyl transferase, family 2 K00721,K01912,K08301 - 2.4.1.83,6.2.1.30 0.00000000000000000000000000000000000000001367 164.0
YYD1_k127_6455359_9 peroxiredoxin activity - - - 0.0000000000000000000000000005893 121.0
YYD1_k127_6461158_0 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 517.0
YYD1_k127_6461158_1 Belongs to the ALAD family K01698 GO:0000287,GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0030312,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005726 437.0
YYD1_k127_6461158_2 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009339 425.0
YYD1_k127_6461158_3 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 359.0
YYD1_k127_6461158_4 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000007968 259.0
YYD1_k127_6461158_5 PFAM von Willebrand factor type A - - - 0.00000000000000000000000000000000000000000003116 174.0
YYD1_k127_6461158_6 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000987 144.0
YYD1_k127_6461158_7 von Willebrand factor, type A K12511 - - 0.0000000000363 74.0
YYD1_k127_6465137_0 Phosphate acyltransferases K01897 - 6.2.1.3 1.18e-218 707.0
YYD1_k127_6465137_1 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005031 473.0
YYD1_k127_6465137_2 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 373.0
YYD1_k127_6465137_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 338.0
YYD1_k127_6465137_4 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000012 247.0
YYD1_k127_6465137_5 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000001896 195.0
YYD1_k127_6465137_6 - - - - 0.00000000000000000000000000000009412 142.0
YYD1_k127_6465137_7 Tetratricopeptide repeat - - - 0.0000000000000000000000000002645 124.0
YYD1_k127_6465137_8 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000005474 92.0
YYD1_k127_6465137_9 PFAM MMPL family K07003 - - 0.000000000000000002654 89.0
YYD1_k127_6498827_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 5.797e-306 948.0
YYD1_k127_6498827_1 Type II IV secretion system protein K02454,K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 504.0
YYD1_k127_6498827_2 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005994 347.0
YYD1_k127_6498827_3 efflux transmembrane transporter activity - - - 0.000000000000000000001167 105.0
YYD1_k127_6498827_4 diguanylate cyclase - - - 0.0000000000002166 82.0
YYD1_k127_6498827_5 - - - - 0.000000000504 67.0
YYD1_k127_6498827_6 PFAM heat shock protein DnaJ domain protein - - - 0.000000002686 68.0
YYD1_k127_6498827_7 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009405,GO:0010468,GO:0010565,GO:0016020,GO:0019216,GO:0019217,GO:0019222,GO:0031323,GO:0044419,GO:0044464,GO:0050789,GO:0050794,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090 - 0.000004897 59.0
YYD1_k127_6525752_0 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 401.0
YYD1_k127_6525752_1 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 310.0
YYD1_k127_6525752_2 histidine kinase A domain protein K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 308.0
YYD1_k127_6525752_3 diguanylate cyclase - - - 0.00000000000000000000000000000000000000001642 169.0
YYD1_k127_6525752_4 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000001708 149.0
YYD1_k127_6525752_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K02405 - - 0.0000000000000000000000000000000000002398 154.0
YYD1_k127_6525752_7 recombinase activity - - - 0.0002926 46.0
YYD1_k127_6525752_8 Glutamine synthetase, beta-Grasp domain K01915 - 6.3.1.2 0.000336 52.0
YYD1_k127_65282_0 serine-type endopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009789 283.0
YYD1_k127_65282_1 ADP binding - - - 0.00000000000000000000000000000000000000316 162.0
YYD1_k127_65282_2 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000000000000001589 160.0
YYD1_k127_65282_3 Histidine kinase - - - 0.0000000000000000000000000000001777 141.0
YYD1_k127_65282_4 - - - - 0.0000000000000000000000000006116 115.0
YYD1_k127_65282_5 DoxX-like family - - - 0.00000000000001259 78.0
YYD1_k127_6529446_0 CoA binding domain - - - 0.0 1179.0
YYD1_k127_6529446_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1124.0
YYD1_k127_6529446_10 YtkA-like - - - 0.0002928 51.0
YYD1_k127_6529446_2 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate K07749 - 2.8.3.16 3.447e-244 756.0
YYD1_k127_6529446_3 Aldehyde dehydrogenase family K00146,K11947 - 1.2.1.39 6.069e-236 739.0
YYD1_k127_6529446_4 Sugar (and other) transporter - - - 7.432e-218 684.0
YYD1_k127_6529446_5 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000713 407.0
YYD1_k127_6529446_6 Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 378.0
YYD1_k127_6529446_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.0000000000000000000000000000000000000000804 169.0
YYD1_k127_6529446_8 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652,K03852 - 2.2.1.6,2.3.3.15 0.0000000000000000000000000000007055 121.0
YYD1_k127_6529446_9 Outer membrane efflux protein K18904 - - 0.0000007947 61.0
YYD1_k127_6560971_0 PQQ-like domain K00114 - 1.1.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 534.0
YYD1_k127_6560971_1 response regulator K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007709 347.0
YYD1_k127_6560971_2 carbamoyl transferase, NodU family K00612,K16035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006619 363.0
YYD1_k127_6560971_3 Histidine kinase K13598 - 2.7.13.3 0.0000000000000000000000000000000000004979 158.0
YYD1_k127_6560971_4 Zinc metalloprotease (Elastase) K01400,K08605,K08777 - 3.4.24.28,3.4.24.30 0.0000000000000000000000000000000005075 150.0
YYD1_k127_6560971_5 PAP2 superfamily - - - 0.000000000000000000000000000003072 130.0
YYD1_k127_6560971_6 peptidyl-tyrosine sulfation - - - 0.000000000000000000009362 101.0
YYD1_k127_6560971_7 - - - - 0.000000000000000003006 91.0
YYD1_k127_6560971_8 UDP-N-acetylglucosamine 2-epimerase activity - - - 0.0000001424 64.0
YYD1_k127_6560971_9 Tetratricopeptide repeat - - - 0.00001898 55.0
YYD1_k127_6563764_0 Belongs to the TPP enzyme family K01577,K01652 - 2.2.1.6,4.1.1.8 0.0 1016.0
YYD1_k127_6563764_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 595.0
YYD1_k127_6563764_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003445 326.0
YYD1_k127_6563764_3 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 297.0
YYD1_k127_6563764_4 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005444 279.0
YYD1_k127_6563764_5 - K09957 - - 0.000000000000000000000000000000000000000000000000000000000000007869 225.0
YYD1_k127_6563764_6 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000008328 205.0
YYD1_k127_6563764_7 amidohydrolase - - - 0.000000000000000000001492 108.0
YYD1_k127_6563764_8 DinB family - - - 0.000000003201 64.0
YYD1_k127_6620097_0 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006737 451.0
YYD1_k127_6620097_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 350.0
YYD1_k127_6620097_2 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000002842 235.0
YYD1_k127_6620097_3 Dystroglycan-type cadherin-like domains. - - - 0.00000000000001695 83.0
YYD1_k127_6620097_4 cellulase activity - - - 0.0000000003033 70.0
YYD1_k127_6620097_5 cellulase activity K20276 - - 0.00001455 56.0
YYD1_k127_6627685_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 488.0
YYD1_k127_6627685_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 - 6.1.1.17,6.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 486.0
YYD1_k127_6627685_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006906 482.0
YYD1_k127_6627685_3 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 381.0
YYD1_k127_6627685_4 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007225 321.0
YYD1_k127_6627685_5 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000004194 267.0
YYD1_k127_6627685_6 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000003469 180.0
YYD1_k127_6627685_7 B3/4 domain - - - 0.0000000000000000000000000000000000152 145.0
YYD1_k127_6627685_8 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000002012 139.0
YYD1_k127_6629381_0 DNA topological change - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004785 547.0
YYD1_k127_6629381_1 FAD binding domain K00481 - 1.14.13.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004212 510.0
YYD1_k127_6629381_2 PFAM Glucose Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 310.0
YYD1_k127_6629381_3 Arylsulfotransferase (ASST) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001214 241.0
YYD1_k127_6629381_4 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000156 168.0
YYD1_k127_6629381_5 Belongs to the UPF0145 family - - - 0.000000000000000000000000000000000003434 146.0
YYD1_k127_6629381_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000001666 111.0
YYD1_k127_6629381_7 Putative zinc-finger - - - 0.0000000000004245 78.0
YYD1_k127_6642833_0 TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 586.0
YYD1_k127_6642833_1 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006273 491.0
YYD1_k127_6642833_2 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000006447 169.0
YYD1_k127_6642833_3 COG2199 FOG GGDEF domain - - - 0.00000000000000000000000000000000001536 143.0
YYD1_k127_6650318_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 332.0
YYD1_k127_6650318_1 Transcriptional regulator, Crp Fnr family - - - 0.0000000000000000000003485 100.0
YYD1_k127_6651189_0 copper-translocating P-type ATPase K17686 - 3.6.3.54 7.054e-308 974.0
YYD1_k127_6651189_1 Hypothetical methyltransferase K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 380.0
YYD1_k127_6651189_2 copper resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001121 280.0
YYD1_k127_6651189_3 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003039 253.0
YYD1_k127_6651189_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000006992 151.0
YYD1_k127_6651189_5 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000001086 141.0
YYD1_k127_6651189_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000002891 75.0
YYD1_k127_6651189_7 - - - - 0.0000000003278 67.0
YYD1_k127_6659343_0 carbamoyl transferase K00612 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001454 296.0
YYD1_k127_6659343_1 - - - - 0.00000000000000000366 97.0
YYD1_k127_6659343_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05889,K12678 - 1.1.2.6 0.0000001094 63.0
YYD1_k127_6659343_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00009917 55.0
YYD1_k127_6659343_4 (ABC) transporter - - - 0.0004983 49.0
YYD1_k127_6663941_0 Nitrile hydratase, alpha chain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006897 332.0
YYD1_k127_6663941_1 Nitrile hydratase, alpha chain - - - 0.0000000000000000000000000000000000000000000000000000000000001149 214.0
YYD1_k127_6663941_2 NHase catalyzes the hydration of various nitrile compounds to the corresponding amides K20807 - 4.2.1.84 0.000000000000000000000000000000000000000000000000000004742 199.0
YYD1_k127_6669061_0 Phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003563 430.0
YYD1_k127_6669061_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000492 372.0
YYD1_k127_6669061_2 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004393 366.0
YYD1_k127_6669061_3 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000000005491 213.0
YYD1_k127_6669061_4 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000008392 148.0
YYD1_k127_6669061_5 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000371 83.0
YYD1_k127_6672750_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 422.0
YYD1_k127_6672750_1 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 309.0
YYD1_k127_6672750_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002681 256.0
YYD1_k127_6672750_3 - K02172 - - 0.00000000000000000000000000000000000000000127 175.0
YYD1_k127_6674759_0 Sulfate permease family K03321 - - 2.207e-202 645.0
YYD1_k127_6674759_1 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 417.0
YYD1_k127_6674759_10 Domain of unknown function (DUF4956) - - - 0.00000000000001306 85.0
YYD1_k127_6674759_2 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 336.0
YYD1_k127_6674759_3 PLD-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003805 271.0
YYD1_k127_6674759_4 - - - - 0.00000000000000000000000001096 121.0
YYD1_k127_6674759_5 SET domain K07117 - - 0.000000000000000000000753 103.0
YYD1_k127_6674759_6 Dihydrodipicolinate reductase, N-terminus K21672 - 1.4.1.12,1.4.1.26 0.0000000000000000000162 95.0
YYD1_k127_6674759_7 - - - - 0.00000000000000000002269 98.0
YYD1_k127_6674759_8 Protein of unknown function (DUF1214) - - - 0.0000000000000000008672 100.0
YYD1_k127_6674759_9 Surface antigen - - - 0.00000000000000001455 96.0
YYD1_k127_6681481_0 response to abiotic stimulus K03086,K06867,K06886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 516.0
YYD1_k127_6681481_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000001076 253.0
YYD1_k127_6681481_2 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000003036 173.0
YYD1_k127_6681481_3 Belongs to the globin family K05916 - 1.14.12.17 0.00000000000000000000000000000000000000000004092 164.0
YYD1_k127_6681481_4 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000001541 131.0
YYD1_k127_6681481_5 Peptidase family M48 - - - 0.000000000000000000000000000454 125.0
YYD1_k127_6681481_6 Belongs to the globin family K05916 - 1.14.12.17 0.000000000000002569 85.0
YYD1_k127_6687543_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 377.0
YYD1_k127_6687543_1 Belongs to the UPF0173 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001046 283.0
YYD1_k127_6687543_2 COG0666 FOG Ankyrin repeat - - - 0.000000000000000000000000000000000000003567 153.0
YYD1_k127_6687543_3 Bacterial regulatory protein, Fis family K07713 - - 0.000000000000000000000000000000000059 138.0
YYD1_k127_6687543_4 - - - - 0.000000000000002085 89.0
YYD1_k127_6687543_5 cytochrome c - - - 0.0000000000006958 75.0
YYD1_k127_6687543_6 Sigma-54 interaction domain - - - 0.0000000001803 62.0
YYD1_k127_6687543_7 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000002031 71.0
YYD1_k127_6687543_8 Cyclic nucleotide-monophosphate binding domain K21867 GO:0003674,GO:0005215,GO:0005216,GO:0005244,GO:0005249,GO:0005261,GO:0005267,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015267,GO:0015318,GO:0015672,GO:0016020,GO:0016021,GO:0022803,GO:0022832,GO:0022836,GO:0022838,GO:0022839,GO:0022843,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042391,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0065007,GO:0065008,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098660,GO:0098662 - 0.000000003085 63.0
YYD1_k127_6687543_9 negative regulation of transcription, DNA-templated K10947 - - 0.00001405 51.0
YYD1_k127_6720781_0 PFAM Permease family K06901 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 361.0
YYD1_k127_6720781_1 HI0933-like protein K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 356.0
YYD1_k127_6720781_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000006389 152.0
YYD1_k127_6720781_3 Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 K00523 - 1.17.1.1 0.0000000000000000000000000000000000001743 163.0
YYD1_k127_6720781_4 ferredoxin-NADP+ reductase activity - - - 0.00000000000000000000000000000000292 138.0
YYD1_k127_6720781_5 general stress protein - - - 0.0000000000000000003134 93.0
YYD1_k127_6720781_6 Polymer-forming cytoskeletal - - - 0.00000000000000003753 88.0
YYD1_k127_6722090_0 ASPIC and UnbV - - - 2.5e-258 807.0
YYD1_k127_6722090_1 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008556 416.0
YYD1_k127_6722090_2 - - - - 0.000000000000000000000000000000000000000000000000000000000009829 223.0
YYD1_k127_6722090_3 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000000000000000000000009942 208.0
YYD1_k127_6722090_4 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000002795 181.0
YYD1_k127_6722090_5 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000002049 166.0
YYD1_k127_6728850_0 AAA ATPase domain - - - 1.066e-260 849.0
YYD1_k127_6728850_1 DNA topological change K03168 - 5.99.1.2 1.205e-230 744.0
YYD1_k127_6728850_2 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 436.0
YYD1_k127_6728850_3 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000808 407.0
YYD1_k127_6728850_4 PFAM Ankyrin repeat K06867 - - 0.000000000000000000000000000000000000000000041 180.0
YYD1_k127_6730166_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 8.608e-224 724.0
YYD1_k127_6730166_1 geranylgeranyl reductase activity K14257 - 1.14.19.49 0.0000000000000000000000000000000000000000000000000001294 188.0
YYD1_k127_6730166_2 Toxic component of a toxin-antitoxin (TA) module. An RNase K07062 - - 0.00000000000000000000000000000000000000000000001967 175.0
YYD1_k127_6730166_3 Plasmid stability protein K21495 - - 0.00000000000000002037 86.0
YYD1_k127_6732347_0 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K04099 - 1.13.11.57 1.953e-203 642.0
YYD1_k127_6732347_1 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004004 448.0
YYD1_k127_6732347_2 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000001216 134.0
YYD1_k127_6732347_3 Universal stress protein family - - - 0.00000000000000000000000000000000872 132.0
YYD1_k127_6732347_4 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.00000000000000000000000004309 113.0
YYD1_k127_6732347_5 Carboxypeptidase regulatory-like domain - - - 0.0000000000005145 79.0
YYD1_k127_6735273_0 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 629.0
YYD1_k127_6735273_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000098,GO:0000166,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009087,GO:0009116,GO:0009119,GO:0009987,GO:0016020,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0019899,GO:0022610,GO:0030260,GO:0030312,GO:0033353,GO:0034641,GO:0035375,GO:0035635,GO:0036094,GO:0040007,GO:0042278,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044403,GO:0044406,GO:0044409,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0044650,GO:0046085,GO:0046128,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0048037,GO:0050662,GO:0051186,GO:0051287,GO:0051701,GO:0051704,GO:0051806,GO:0051828,GO:0055086,GO:0070403,GO:0071704,GO:0071944,GO:0072521,GO:0097159,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901657 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004698 465.0
YYD1_k127_6735273_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 304.0
YYD1_k127_6735273_3 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000005371 88.0
YYD1_k127_6740069_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 1.107e-232 761.0
YYD1_k127_6740069_1 Amino acid permease - - - 5.836e-207 661.0
YYD1_k127_6740069_10 - - - - 0.00000002371 60.0
YYD1_k127_6740069_11 Protein of unknown function (DUF3891) - - - 0.000000535 60.0
YYD1_k127_6740069_2 Belongs to the TPP enzyme family K01576,K01652 - 2.2.1.6,4.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009911 519.0
YYD1_k127_6740069_3 PepSY-associated TM region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005833 291.0
YYD1_k127_6740069_4 lipoprotein biosynthetic process K13292 - - 0.00000000000000000000000000000000000000000009827 169.0
YYD1_k127_6740069_5 Cytochrome C' - - - 0.0000000000000000000000000000000003 138.0
YYD1_k127_6740069_6 40-residue YVTN family beta-propeller repeat - - - 0.00000000000000000000003192 113.0
YYD1_k127_6740069_7 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000000003184 98.0
YYD1_k127_6740069_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.00000000000002011 83.0
YYD1_k127_6740069_9 Cytochrome c K17760 - 1.1.9.1 0.000000001292 65.0
YYD1_k127_6741601_0 Dehydrogenase E1 component K11381 - 1.2.4.4 4.678e-263 828.0
YYD1_k127_6741601_1 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001413 264.0
YYD1_k127_6741601_2 Amidinotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000002514 224.0
YYD1_k127_6741601_3 PFAM Rhomboid family - - - 0.00000000000000000000000000000000000000000000000002086 191.0
YYD1_k127_6741601_4 Cupin 2, conserved barrel - - - 0.0000000000000000000000000000000000000000000001837 171.0
YYD1_k127_6741601_5 PFAM Cupin 2, conserved barrel - - - 0.00000000000000000000000000000000006938 136.0
YYD1_k127_6741601_6 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000001673 138.0
YYD1_k127_6741601_7 ABC-2 family transporter protein - - - 0.000000000000000000000000001113 126.0
YYD1_k127_6741601_8 PFAM Major Facilitator Superfamily K08223 - - 0.0000392 53.0
YYD1_k127_6790690_0 TonB-dependent Receptor Plug Domain - - - 0.0 1035.0
YYD1_k127_6790690_1 Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate K00451 - 1.13.11.5 5.502e-204 642.0
YYD1_k127_6790690_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003104 286.0
YYD1_k127_6790690_11 Phosphoadenosine phosphosulfate reductase family K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000001273 257.0
YYD1_k127_6790690_12 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001031 242.0
YYD1_k127_6790690_13 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000009155 238.0
YYD1_k127_6790690_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000007297 225.0
YYD1_k127_6790690_15 LVIVD repeat - - - 0.00000000000000000000000000000000000000000000000000001579 195.0
YYD1_k127_6790690_16 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000004964 192.0
YYD1_k127_6790690_17 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000002758 153.0
YYD1_k127_6790690_18 membrane organization K07277,K09800 - - 0.0000000000000001509 80.0
YYD1_k127_6790690_19 LVIVD repeat - - - 0.000000000000555 79.0
YYD1_k127_6790690_2 Phosphoadenosine phosphosulfate reductase family K00957 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 477.0
YYD1_k127_6790690_3 Peptidase family M28 K01295 - 3.4.17.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002758 481.0
YYD1_k127_6790690_4 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00956 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004937 481.0
YYD1_k127_6790690_5 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 469.0
YYD1_k127_6790690_6 DNA topological change K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004722 355.0
YYD1_k127_6790690_7 response to heat K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008 331.0
YYD1_k127_6790690_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 325.0
YYD1_k127_6840111_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 2.756e-217 684.0
YYD1_k127_6840111_1 2OG-Fe(II) oxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000486 191.0
YYD1_k127_6840111_2 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000000000000000000000000000002471 149.0
YYD1_k127_6840111_3 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000002747 123.0
YYD1_k127_6842029_0 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008345 547.0
YYD1_k127_6842029_1 Carbohydrate family 9 binding domain-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 446.0
YYD1_k127_6842029_2 PFAM Fumarate lyase K01744 - 4.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 304.0
YYD1_k127_6842029_3 - - - - 0.00000000000000000000000000000000000000000000000001079 187.0
YYD1_k127_6842029_4 MEDS: MEthanogen/methylotroph, DcmR Sensory domain - - - 0.00000000000000000000000000000000007157 150.0
YYD1_k127_6842029_5 - - - - 0.00000001144 62.0
YYD1_k127_684472_0 Manganese containing catalase K07217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006142 598.0
YYD1_k127_684472_1 Ribonuclease, BN K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000002626 241.0
YYD1_k127_684472_2 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000002013 220.0
YYD1_k127_684472_3 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000001478 224.0
YYD1_k127_684472_4 - - - - 0.000000000000000000000000000000000000009105 149.0
YYD1_k127_684472_5 - - - - 0.00000000000000000000002622 102.0
YYD1_k127_684472_7 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00000000000007142 76.0
YYD1_k127_684472_8 Doxx family - - - 0.00000000009596 69.0
YYD1_k127_684472_9 Domain of unknown function (DU1801) - - - 0.00000003734 60.0
YYD1_k127_6869734_0 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 597.0
YYD1_k127_6869734_1 TIR domain - - - 0.0000000000004596 80.0
YYD1_k127_6869734_2 Xylose isomerase-like TIM barrel - - - 0.0001133 44.0
YYD1_k127_6879453_0 Angiotensin-converting enzyme K01283 - 3.4.15.1 2.297e-269 840.0
YYD1_k127_6879453_1 beta-keto acid cleavage enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 407.0
YYD1_k127_6879453_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000005502 224.0
YYD1_k127_6879453_3 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000000209 170.0
YYD1_k127_6879453_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000003758 131.0
YYD1_k127_6879453_5 Glyoxalase-like domain K04750 - - 0.00000000000000000000007236 111.0
YYD1_k127_6879453_6 Putative esterase K07214 - - 0.000000000000000000000682 96.0
YYD1_k127_6879453_7 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000001181 101.0
YYD1_k127_6879453_8 Protein of unknown function (DUF3738) - - - 0.0000004257 52.0
YYD1_k127_6900816_0 Efflux pump membrane transporter K18299 - - 3.619e-246 771.0
YYD1_k127_6900816_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18298 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000487 393.0
YYD1_k127_6900816_2 COG0657 Esterase lipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 315.0
YYD1_k127_6900816_3 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 305.0
YYD1_k127_6900816_4 helix_turn_helix, Lux Regulon K07684 - - 0.0000000000000000000000000000000000000000000000000000000001293 211.0
YYD1_k127_6900816_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000321 182.0
YYD1_k127_6900816_6 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000001165 110.0
YYD1_k127_6916970_0 PQQ enzyme repeat K00117 - 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 502.0
YYD1_k127_6916970_1 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004295 307.0
YYD1_k127_6916970_2 Protein of unknown function (DUF1569) - - - 0.000000000000000000000000000000000000000005234 159.0
YYD1_k127_707096_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 4.583e-247 786.0
YYD1_k127_707096_1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 539.0
YYD1_k127_707096_10 Pfam:Pyridox_oxidase - - - 0.000000000000000000000000000000000000000000001669 168.0
YYD1_k127_707096_11 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.000000000000000000000000000000000000000008703 156.0
YYD1_k127_707096_12 TIGRFAM geranylgeranyl reductase K21401 - 1.3.99.38 0.00000000000000000000000000000000001282 150.0
YYD1_k127_707096_13 methyltransferase activity K21310 - 2.1.1.334 0.00000000000000000000000005263 118.0
YYD1_k127_707096_14 Isoprenylcysteine carboxyl methyltransferase K16168 - - 0.000000000000000000000004608 111.0
YYD1_k127_707096_15 - - - - 0.0000000000000000005438 91.0
YYD1_k127_707096_16 Peptidase family M28 - - - 0.000000000004048 67.0
YYD1_k127_707096_17 zinc-ribbon domain - - - 0.0002677 46.0
YYD1_k127_707096_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 442.0
YYD1_k127_707096_3 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008808 342.0
YYD1_k127_707096_4 TIGRFAM RarD protein, DMT superfamily transporter K05786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 301.0
YYD1_k127_707096_5 3-oxoacyl-[acyl-carrier-protein] synthase activity K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000001276 271.0
YYD1_k127_707096_6 Glycosyl transferase family 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007321 251.0
YYD1_k127_707096_7 PFAM Rhomboid family K07059 - - 0.00000000000000000000000000000000000000000000000000000000000000005197 229.0
YYD1_k127_707096_8 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000002692 190.0
YYD1_k127_707096_9 PFAM Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000001442 173.0
YYD1_k127_711986_0 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 366.0
YYD1_k127_723893_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 356.0
YYD1_k127_723893_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009105 310.0
YYD1_k127_723893_10 Phosphatidylethanolamine-binding protein K06910 - - 0.0000001722 53.0
YYD1_k127_723893_2 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002018 273.0
YYD1_k127_723893_3 Hydantoinase/oxoprolinase K07072 - 2.5.1.131 0.00000000000000000000000000000000000000000000000000000001458 218.0
YYD1_k127_723893_4 Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000006132 161.0
YYD1_k127_723893_5 ClpX C4-type zinc finger - - - 0.00000000000000000000000000003442 123.0
YYD1_k127_723893_6 - K01633,K07144 - 1.13.11.81,2.7.4.31,4.1.2.25,5.1.99.8 0.00000000000000000000000000005424 133.0
YYD1_k127_723893_7 Pfam:DUF556 - - - 0.000000000000000000000000000109 124.0
YYD1_k127_723893_8 lyase activity - - - 0.00000000000000000188 100.0
YYD1_k127_723893_9 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.00000001633 57.0
YYD1_k127_728045_0 Pyrrolo-quinoline quinone K00114 - 1.1.2.8 7.137e-230 725.0
YYD1_k127_728045_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001117 279.0
YYD1_k127_728045_2 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000004603 83.0
YYD1_k127_729361_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 GO:0008150,GO:0040007 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 577.0
YYD1_k127_729361_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009716 312.0
YYD1_k127_729361_2 PFAM alpha beta hydrolase fold K01561 - 3.8.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 305.0
YYD1_k127_729361_3 Memo-like protein K06990 - - 0.00000000000000000000000000000000000000000000000000000000003381 215.0
YYD1_k127_729361_4 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000000000000000000000000000000000000000000000001018 208.0
YYD1_k127_729361_5 PFAM AMMECR1 domain protein K09141 - - 0.0000000000000000000000000000000000000000000194 171.0
YYD1_k127_729361_6 S1 P1 Nuclease - - - 0.00000000000000000000000000000000000003123 156.0
YYD1_k127_729361_7 PFAM Integral membrane protein TerC K05794 - - 0.000000000000000005993 87.0
YYD1_k127_729361_8 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000005641 72.0
YYD1_k127_729361_9 23S rRNA-intervening sequence protein - - - 0.0000000009275 64.0
YYD1_k127_745343_0 rhs element vgr protein K11904 - - 7.196e-209 662.0
YYD1_k127_745343_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 436.0
YYD1_k127_753015_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01576,K01652 - 2.2.1.6,4.1.1.7 8.374e-216 689.0
YYD1_k127_753015_1 Pyruvate:ferredoxin oxidoreductase core domain II K03737 GO:0003674,GO:0003824,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016491,GO:0050896,GO:0055114 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 488.0
YYD1_k127_753015_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 321.0
YYD1_k127_753015_3 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000001509 228.0
YYD1_k127_753015_5 Cytochrome c K17760 - 1.1.9.1 0.0000000001331 73.0
YYD1_k127_773041_0 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 301.0
YYD1_k127_773041_1 Thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000001012 244.0
YYD1_k127_773041_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000005346 207.0
YYD1_k127_773041_3 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000378 200.0
YYD1_k127_773041_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000006114 105.0
YYD1_k127_797639_0 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006669 461.0
YYD1_k127_797639_1 PFAM Peptidase M19, renal dipeptidase K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004854 349.0
YYD1_k127_797639_10 Protein of unknown function (DUF3237) - - - 0.000000000000000000000000000000000000000000005503 169.0
YYD1_k127_797639_11 SMART Extracellular solute-binding protein, family 3 K02030 - - 0.000000000000000000000000002431 123.0
YYD1_k127_797639_12 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.00000000000000000000000001642 121.0
YYD1_k127_797639_13 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.000000000000000151 82.0
YYD1_k127_797639_14 TIGRFAM TonB family protein K03832 - - 0.0000000000002058 75.0
YYD1_k127_797639_15 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000004819 59.0
YYD1_k127_797639_16 YtxH-like protein - - - 0.00003421 49.0
YYD1_k127_797639_2 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 338.0
YYD1_k127_797639_3 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002802 257.0
YYD1_k127_797639_4 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000005394 259.0
YYD1_k127_797639_5 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000009953 243.0
YYD1_k127_797639_6 Belongs to the peptidase S8 family K12287 - - 0.00000000000000000000000000000000000000000000000000000000004635 235.0
YYD1_k127_797639_7 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.9 0.000000000000000000000000000000000000000000000000000000002229 206.0
YYD1_k127_797639_8 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000002203 196.0
YYD1_k127_797639_9 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000002363 181.0
YYD1_k127_806893_0 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000298 209.0
YYD1_k127_806893_1 - - - - 0.0000000000000000000000000000000000000000000000000000002581 201.0
YYD1_k127_806893_2 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000009948 184.0
YYD1_k127_806893_3 Flavodoxin-like fold K00355 - 1.6.5.2 0.0000000000000002168 81.0
YYD1_k127_806893_4 Nitroreductase family - - - 0.00000000001049 68.0
YYD1_k127_806893_5 AAA domain K07028 - - 0.0000000003042 64.0
YYD1_k127_833450_0 Carboxypeptidase regulatory-like domain - - - 2.623e-237 767.0
YYD1_k127_833450_1 PQQ-like domain K05889 - 1.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003927 478.0
YYD1_k127_833450_10 TonB-dependent receptor - - - 0.0003881 44.0
YYD1_k127_833450_2 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008926 411.0
YYD1_k127_833450_3 L,D-transpeptidase catalytic domain K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000301 273.0
YYD1_k127_833450_4 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000006019 229.0
YYD1_k127_833450_5 NHL repeat - - - 0.00000000000000000000000000000000000000000002429 173.0
YYD1_k127_833450_6 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000199 159.0
YYD1_k127_833450_7 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000004031 140.0
YYD1_k127_833450_9 peptidyl-tyrosine sulfation - - - 0.00000003386 61.0
YYD1_k127_852521_0 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006791 454.0
YYD1_k127_852521_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 331.0
YYD1_k127_852521_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000001159 225.0
YYD1_k127_852521_3 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000003757 224.0
YYD1_k127_852521_4 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000003121 186.0
YYD1_k127_855549_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002562 491.0
YYD1_k127_855549_1 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 394.0
YYD1_k127_855549_10 - - - - 0.0000000000000001366 85.0
YYD1_k127_855549_11 Domain of Unknown Function (DUF1080) - - - 0.000000000001718 76.0
YYD1_k127_855549_12 helix_turn_helix, mercury resistance - - - 0.000000000005922 72.0
YYD1_k127_855549_13 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00003771 48.0
YYD1_k127_855549_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 320.0
YYD1_k127_855549_3 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002865 276.0
YYD1_k127_855549_4 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004335 302.0
YYD1_k127_855549_5 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.00000000000000000000000000000000000000000000000000000000000006318 228.0
YYD1_k127_855549_6 translation initiation inhibitor, yjgF family K04782 - 4.2.99.21 0.0000000000000000000000000000000000000000000000000001362 188.0
YYD1_k127_855549_7 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000003223 139.0
YYD1_k127_855549_8 Periplasmic or secreted lipoprotein - - - 0.000000000000000000000002793 113.0
YYD1_k127_855549_9 Polymer-forming cytoskeletal - - - 0.00000000000000000000005974 103.0
YYD1_k127_877707_0 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005987 386.0
YYD1_k127_877707_1 General secretion pathway K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000002999 195.0
YYD1_k127_877707_2 Putative restriction endonuclease - - - 0.000000000000000000000000000000000001759 144.0
YYD1_k127_877707_3 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000003368 145.0
YYD1_k127_877707_5 Family with sequence similarity 186 member A - - - 0.00001275 47.0
YYD1_k127_877707_6 Transglutaminase-like superfamily - - - 0.0002575 49.0
YYD1_k127_878986_0 Proto-chlorophyllide reductase 57 kD subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002985 370.0
YYD1_k127_878986_1 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000003482 225.0
YYD1_k127_878986_2 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000003947 235.0
YYD1_k127_878986_3 protein tyrosine kinase activity K03593 - - 0.00000000000000000000000000000000000004014 156.0
YYD1_k127_878986_6 Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 0.000000000000000001184 86.0
YYD1_k127_878986_7 FR47-like protein - - - 0.000000000000001537 80.0
YYD1_k127_884054_0 PFAM phospholipase D Transphosphatidylase K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000976 428.0
YYD1_k127_884054_1 Cupin domain - - - 0.00000000000002551 72.0
YYD1_k127_884054_2 Periplasmic or secreted lipoprotein - - - 0.0004643 49.0
YYD1_k127_898477_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002966 306.0
YYD1_k127_898477_1 Bacterial periplasmic substrate-binding proteins K02029,K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 300.0
YYD1_k127_898477_2 AAA domain, putative AbiEii toxin, Type IV TA system K02028 - 3.6.3.21 0.00000000000000000000000000000000000000000000000000001616 196.0
YYD1_k127_930287_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 601.0
YYD1_k127_930287_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 426.0
YYD1_k127_930287_10 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000004816 195.0
YYD1_k127_930287_11 YCII-related domain - - - 0.000000000000000000000000000000000000000000131 164.0
YYD1_k127_930287_12 PFAM Outer membrane efflux protein - - - 0.00000000000000000000000000000000000001671 163.0
YYD1_k127_930287_13 PFAM phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.000000000000000000000000001567 127.0
YYD1_k127_930287_14 - - - - 0.000000000000003649 87.0
YYD1_k127_930287_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 416.0
YYD1_k127_930287_3 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 313.0
YYD1_k127_930287_4 Protein of unknown function (DUF2400) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004166 254.0
YYD1_k127_930287_5 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000003604 243.0
YYD1_k127_930287_6 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000007353 227.0
YYD1_k127_930287_7 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000001234 210.0
YYD1_k127_930287_8 PFAM Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000006766 205.0
YYD1_k127_930287_9 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000001799 199.0
YYD1_k127_931138_0 xanthine dehydrogenase activity - - - 2.392e-303 944.0
YYD1_k127_931138_1 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 552.0
YYD1_k127_931138_2 xanthine dehydrogenase activity K13479 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 328.0
YYD1_k127_931138_3 HEAT repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002079 293.0
YYD1_k127_931138_4 2 iron, 2 sulfur cluster binding K03518,K07302,K13483 - 1.2.5.3,1.3.99.16 0.000000000000000000000000000000000000000000000000000000019 200.0
YYD1_k127_931138_5 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000002747 170.0
YYD1_k127_931138_6 - - - - 0.0000000000000000000000000000004617 133.0
YYD1_k127_931138_7 - - - - 0.0000000000000000000000000001229 125.0
YYD1_k127_931138_8 GCN5-related N-acetyl-transferase K06975 - - 0.00000000000003296 79.0
YYD1_k127_931138_9 Endonuclease/Exonuclease/phosphatase family - - - 0.00001023 57.0
YYD1_k127_935135_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0030554,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 494.0
YYD1_k127_935135_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005196 482.0
YYD1_k127_935135_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 427.0
YYD1_k127_935135_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 401.0
YYD1_k127_935135_4 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 346.0
YYD1_k127_935135_5 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 339.0
YYD1_k127_935135_6 Belongs to the SEDS family K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 340.0
YYD1_k127_935135_7 Cell division protein FtsQ K03589 - - 0.0000000003603 72.0
YYD1_k127_935135_8 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00002911 49.0
YYD1_k127_949606_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 377.0
YYD1_k127_949606_1 - - - - 0.00000000000000000000000000000000000000000000000000000000002576 218.0
YYD1_k127_949606_2 methyltransferase K00563,K10947 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008270,GO:0008649,GO:0008757,GO:0008989,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046914,GO:0052912,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.187 0.0000000000000000000000000000000000000000000001311 180.0
YYD1_k127_949606_3 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000002574 153.0
YYD1_k127_957873_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 3.914e-230 739.0
YYD1_k127_957873_1 ABC transporter K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006912 616.0
YYD1_k127_957873_2 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 543.0
YYD1_k127_957873_3 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 437.0
YYD1_k127_957873_4 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005715 280.0
YYD1_k127_957873_5 PFAM ATP-binding region, ATPase domain protein K02668,K07708,K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000002292 208.0
YYD1_k127_957873_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000001429 157.0
YYD1_k127_982978_0 Peptidase, M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 439.0
YYD1_k127_982978_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 370.0
YYD1_k127_982978_2 protein tyrosine kinase activity K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 350.0
YYD1_k127_982978_3 thiolester hydrolase activity K01179,K06889,K10773,K15853 - 3.2.1.4,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 338.0
YYD1_k127_982978_4 PFAM Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000633 330.0
YYD1_k127_982978_5 PFAM Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009737 317.0
YYD1_k127_982978_6 Belongs to the peptidase S51 family K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000222 282.0
YYD1_k127_99183_0 B12 binding domain - - - 1.25e-237 745.0
YYD1_k127_99183_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006747 405.0
YYD1_k127_99183_2 ChrR Cupin-like domain - - - 0.000000000000000000000000000000000000000000001198 169.0
YYD1_k127_99183_3 PFAM TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000002451 124.0
YYD1_k127_993599_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003511 409.0
YYD1_k127_993599_1 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009248 265.0
YYD1_k127_993599_2 RadC-like JAB domain K03630 - - 0.0000000000000000000000000000000000000000000000000008802 191.0
YYD1_k127_993599_3 D-Tyr-tRNA(Tyr) deacylase K07560 - - 0.00000000000000000000000000000000000000000000000008221 181.0
YYD1_k127_993599_4 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000006112 192.0
YYD1_k127_993599_5 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.000000000000000000000000000000000000000009873 160.0
YYD1_k127_993599_6 - - - - 0.00000000000002389 84.0
YYD1_k127_994399_0 Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP- dependent clade X sub-subfamily K00850 - 2.7.1.11 1.55e-203 640.0
YYD1_k127_994399_1 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 285.0
YYD1_k127_994399_2 Porin subfamily - - - 0.00000000000000000000000000000000000000000000000001935 194.0