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Overview

ID MAG04628
Name YYD1_bin.7
Sample SMP0124
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Vicinamibacteria
Order Vicinamibacterales
Family 2-12-FULL-66-21
Genus
Species
Assembly information
Completeness (%) 75.43
Contamination (%) 2.72
GC content (%) 68.0
N50 (bp) 9,669
Genome size (bp) 3,444,914

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2876

Gene name Description KEGG GOs EC E-value Score Sequence
YYD1_k127_1039351_0 3-beta hydroxysteroid dehydrogenase/isomerase family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 385.0
YYD1_k127_1039351_1 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000000000000000000000000000001772 241.0
YYD1_k127_1039351_2 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000005266 161.0
YYD1_k127_1039351_3 UDP-galactopyranose mutase - - - 0.00000000000000000000000000000000000000005539 167.0
YYD1_k127_1039351_4 SIS domain K03271 - 5.3.1.28 0.0000000000000000000000000000000000001072 163.0
YYD1_k127_1039351_5 slime layer polysaccharide biosynthetic process K06871,K16710 - - 0.0000000000000000000000000000000000002571 155.0
YYD1_k127_1039351_6 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000006041 131.0
YYD1_k127_1039351_7 lysyltransferase activity K07027 - - 0.0000000000000004054 92.0
YYD1_k127_1039351_8 myo-inosose-2 dehydratase activity - - - 0.00000001182 67.0
YYD1_k127_1061577_0 hydrolase, family 65, central catalytic - - - 6.097e-302 949.0
YYD1_k127_1061577_1 PFAM oxidoreductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 413.0
YYD1_k127_1061577_2 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000000000000004611 203.0
YYD1_k127_1061577_3 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses K01916,K01950 GO:0003674,GO:0003824,GO:0003952,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016020,GO:0016874,GO:0016879,GO:0016880,GO:0016884,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5,6.3.5.1 0.00000000000000000000003384 102.0
YYD1_k127_1061577_4 delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase K12663 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 - 0.000000000000000001069 101.0
YYD1_k127_1085412_0 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 455.0
YYD1_k127_1085412_1 Stage II sporulation protein E K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000744 232.0
YYD1_k127_1091931_0 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000002564 221.0
YYD1_k127_1091931_1 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000000000000000000001385 171.0
YYD1_k127_1091931_2 Sporulation and spore germination - - - 0.0000000000000000002538 100.0
YYD1_k127_1091931_3 - - - - 0.0000000000000001594 84.0
YYD1_k127_1091931_4 nuclear chromosome segregation - - - 0.000000005737 68.0
YYD1_k127_1158558_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 2.059e-302 956.0
YYD1_k127_1158558_1 ABC transporter K06158 GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0050896 - 1.946e-270 840.0
YYD1_k127_1158558_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 623.0
YYD1_k127_1158558_3 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 379.0
YYD1_k127_1158558_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006688 260.0
YYD1_k127_1158558_5 pfam nipsnap - - - 0.0000000000000000000000000000000000000000000000000000000000001879 221.0
YYD1_k127_1158558_6 Yip1 domain - - - 0.00000000000000000000000000000000000000000002417 168.0
YYD1_k127_1158558_7 Protein chain release factor B K15034 - - 0.0000000000000000000000000000000001137 136.0
YYD1_k127_1158558_8 - - - - 0.000000402 62.0
YYD1_k127_1177819_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 592.0
YYD1_k127_1177819_1 regulation of response to stimulus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007167 419.0
YYD1_k127_1177819_2 Cat eye syndrome chromosome region, candidate 1 K01488,K19572 GO:0000003,GO:0000323,GO:0001664,GO:0001775,GO:0002164,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002520,GO:0003006,GO:0003674,GO:0003824,GO:0004000,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0006109,GO:0006139,GO:0006144,GO:0006152,GO:0006154,GO:0006725,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006955,GO:0007154,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0008083,GO:0008150,GO:0008152,GO:0008270,GO:0008284,GO:0009056,GO:0009058,GO:0009112,GO:0009113,GO:0009116,GO:0009119,GO:0009163,GO:0009164,GO:0009267,GO:0009605,GO:0009791,GO:0009966,GO:0009987,GO:0009991,GO:0010469,GO:0010646,GO:0012505,GO:0016020,GO:0016021,GO:0016192,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019222,GO:0019239,GO:0019438,GO:0019439,GO:0019538,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0030097,GO:0030141,GO:0030154,GO:0030545,GO:0031224,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031685,GO:0031974,GO:0031982,GO:0031983,GO:0032501,GO:0032502,GO:0032504,GO:0032940,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0034774,GO:0035166,GO:0035167,GO:0035578,GO:0036230,GO:0042119,GO:0042127,GO:0042278,GO:0042386,GO:0042440,GO:0042451,GO:0042454,GO:0042455,GO:0042582,GO:0042594,GO:0042737,GO:0042802,GO:0042803,GO:0043094,GO:0043096,GO:0043101,GO:0043103,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043394,GO:0043617,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045055,GO:0045321,GO:0046085,GO:0046100,GO:0046101,GO:0046102,GO:0046103,GO:0046112,GO:0046128,GO:0046129,GO:0046130,GO:0046148,GO:0046483,GO:0046700,GO:0046872,GO:0046903,GO:0046914,GO:0046983,GO:0048018,GO:0048232,GO:0048468,GO:0048513,GO:0048515,GO:0048518,GO:0048522,GO:0048534,GO:0048542,GO:0048569,GO:0048583,GO:0048609,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051704,GO:0051716,GO:0055086,GO:0060205,GO:0065007,GO:0065009,GO:0070013,GO:0071496,GO:0071704,GO:0072521,GO:0072522,GO:0072523,GO:0080090,GO:0097367,GO:0097708,GO:0098772,GO:0099503,GO:1901135,GO:1901136,GO:1901137,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659 3.5.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000001462 286.0
YYD1_k127_1177819_3 Histidine kinase-like ATPase domain K01338,K04757,K06379,K08282,K17752 - 2.7.11.1,3.4.21.53 0.0000000000000000000000000000000000000000000000000002135 203.0
YYD1_k127_1177819_4 DinB family - - - 0.0000000000000000000000000000000000000000000000001954 181.0
YYD1_k127_1177819_5 polysaccharide catabolic process - - - 0.0000000000000000000000000000000003495 143.0
YYD1_k127_1177819_6 serine-type peptidase activity K01990,K08884,K12132,K18912 - 1.14.99.50,2.7.11.1 0.0000000000000000000000000005092 116.0
YYD1_k127_1177819_7 alpha/beta hydrolase fold - - - 0.000000000001547 74.0
YYD1_k127_1177819_8 COG0110 Acetyltransferase (isoleucine patch superfamily) K00661 - 2.3.1.79 0.000001412 49.0
YYD1_k127_1181996_0 two component, sigma54 specific, transcriptional regulator, Fis family K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000451 456.0
YYD1_k127_1181996_1 Type II secretion system (T2SS), protein F K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004924 432.0
YYD1_k127_1181996_2 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 385.0
YYD1_k127_1181996_3 Sensor histidine kinase PilS, PAS domain-containing K02668,K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003713 288.0
YYD1_k127_1181996_4 Bacterial membrane protein, YfhO - - - 0.000000000000000008986 91.0
YYD1_k127_1182233_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 7.476e-227 720.0
YYD1_k127_1182233_1 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009403 425.0
YYD1_k127_1182233_2 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003785 346.0
YYD1_k127_1182233_3 PFAM DAHP synthetase I KDSA K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 324.0
YYD1_k127_1182233_4 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000001914 277.0
YYD1_k127_1182233_5 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.000000000000000000000000000000000000000000000003512 188.0
YYD1_k127_1185226_0 Sulfatase - - - 2.033e-210 668.0
YYD1_k127_1185226_1 sulfatase - - - 5.355e-202 645.0
YYD1_k127_1185226_2 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000292 548.0
YYD1_k127_1185226_3 glucosamine-6-phosphate deaminase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008014 542.0
YYD1_k127_1185226_4 Carbohydrate family 9 binding domain-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 420.0
YYD1_k127_1185226_5 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 314.0
YYD1_k127_1185226_6 Amidohydrolase - - - 0.00000000000000000000000000000000002277 135.0
YYD1_k127_1188220_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 479.0
YYD1_k127_1188220_1 Phosphomethylpyrimidine kinase K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000001258 241.0
YYD1_k127_1188220_11 - - - - 0.00001281 55.0
YYD1_k127_1188220_12 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0004041 52.0
YYD1_k127_1188220_2 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 0.000000000000000000000000000000000000000000000000000000003583 206.0
YYD1_k127_1188220_3 GHMP kinases N terminal domain K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000001776 191.0
YYD1_k127_1188220_4 O-Antigen ligase K18814 - - 0.0000000000000000000000000000000000000000001338 177.0
YYD1_k127_1188220_5 Glycosyl transferase, family 9 K02843,K02849 - - 0.000000000000000000000000000000000000000001912 169.0
YYD1_k127_1188220_6 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000000000000000000000568 170.0
YYD1_k127_1188220_7 Tetratricopeptide repeat K11935 - - 0.00000000000000000000000000000000009726 151.0
YYD1_k127_1188220_8 Cold shock K03704 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000004414 114.0
YYD1_k127_1188220_9 Trm112p-like protein K00912,K09791 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.7.1.130 0.0000000000000000007161 87.0
YYD1_k127_118963_0 diguanylate cyclase (GGDEF) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 489.0
YYD1_k127_118963_1 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 331.0
YYD1_k127_118963_2 spermidine synthase activity K00797 GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 309.0
YYD1_k127_118963_3 region 4 type 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002431 268.0
YYD1_k127_118963_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.0000000000000000000000000000000000000000000000000000001091 202.0
YYD1_k127_118963_5 PFAM GCN5-related N-acetyltransferase K03827 - - 0.000000000000000000000000000000000000000000004569 173.0
YYD1_k127_118963_6 - - - - 0.000000000000000000000000006322 113.0
YYD1_k127_118963_7 peroxiredoxin activity - - - 0.0002028 49.0
YYD1_k127_1190819_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007229 593.0
YYD1_k127_1190819_1 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 598.0
YYD1_k127_1190819_2 PFAM nucleoside H symporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 473.0
YYD1_k127_1190819_3 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000000000001631 208.0
YYD1_k127_1190819_4 oxidoreductase activity - - - 0.000000000000000000001868 110.0
YYD1_k127_1190819_5 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000002311 93.0
YYD1_k127_1190819_6 Uncharacterized protein conserved in bacteria (DUF2255) - - - 0.00000000000000000001061 96.0
YYD1_k127_1190819_7 oxidoreductase activity - - - 0.000000000001941 81.0
YYD1_k127_1190819_8 von willebrand factor type a K07114 - - 0.00000002345 64.0
YYD1_k127_1190819_9 epimerase K07071 - - 0.000002326 51.0
YYD1_k127_1209077_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 7.58e-256 812.0
YYD1_k127_1209077_1 Alcohol dehydrogenase GroES-like domain K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000005659 176.0
YYD1_k127_1209077_2 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000002011 176.0
YYD1_k127_1210331_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005948 555.0
YYD1_k127_1210331_1 Domain of unknown function (DUF1835) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004786 274.0
YYD1_k127_1221825_0 peptidoglycan glycosyltransferase activity K03588,K05364,K05837 GO:0002682,GO:0002684,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009605,GO:0009607,GO:0009987,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051301,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0075136 - 2.484e-219 722.0
YYD1_k127_1221825_1 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002354 295.0
YYD1_k127_1221825_2 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000998 247.0
YYD1_k127_1221825_3 histone H2A K63-linked ubiquitination K01768,K03220,K10914 - 4.6.1.1 0.0000000000000000000000000000000000000000005996 168.0
YYD1_k127_1221825_4 PFAM transcriptional regulator domain protein - - - 0.00001271 48.0
YYD1_k127_1233842_0 membrane protein involved in D-alanine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008609 481.0
YYD1_k127_1233842_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 473.0
YYD1_k127_1233842_10 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000004517 196.0
YYD1_k127_1233842_11 PFAM Rhomboid family - - - 0.0000000000000000000000000000000000000000000000155 180.0
YYD1_k127_1233842_12 PFAM Major Facilitator Superfamily K08223 - - 0.00000000000000000000000000000000000000000003995 176.0
YYD1_k127_1233842_13 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000000000000000000000000000001285 161.0
YYD1_k127_1233842_14 polysaccharide biosynthetic process - - - 0.000000000000000000000000000000000000000516 167.0
YYD1_k127_1233842_15 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000004996 160.0
YYD1_k127_1233842_16 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000005205 168.0
YYD1_k127_1233842_17 radical SAM domain protein - - - 0.00000000000000000000000000000000000009573 162.0
YYD1_k127_1233842_18 Yqey-like protein K09117 - - 0.0000000000000000000000000000002075 135.0
YYD1_k127_1233842_19 phosphinothricin N-acetyltransferase activity - - - 0.00000000000000000000000000001213 132.0
YYD1_k127_1233842_2 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 420.0
YYD1_k127_1233842_20 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000002162 100.0
YYD1_k127_1233842_21 Glycosyl transferase 4-like - - - 0.00000000000000004418 94.0
YYD1_k127_1233842_22 Methionine biosynthesis protein MetW - - - 0.000000000000001603 87.0
YYD1_k127_1233842_23 Dehydrogenase reductase sdr K00059 - 1.1.1.100 0.00000000000007684 73.0
YYD1_k127_1233842_24 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000002124 77.0
YYD1_k127_1233842_25 PFAM Methyltransferase type 11 - - - 0.000000001412 68.0
YYD1_k127_1233842_26 lipolytic protein G-D-S-L family K20306 - - 0.000002618 61.0
YYD1_k127_1233842_27 oligosaccharyl transferase activity - - - 0.00008706 55.0
YYD1_k127_1233842_3 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 403.0
YYD1_k127_1233842_4 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 357.0
YYD1_k127_1233842_5 PFAM glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 332.0
YYD1_k127_1233842_6 aromatic amino acid beta-eliminating lyase threonine aldolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 331.0
YYD1_k127_1233842_7 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000002958 244.0
YYD1_k127_1233842_8 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000002233 213.0
YYD1_k127_1233842_9 GtrA-like protein K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000003339 198.0
YYD1_k127_1253008_0 TIGRFAM sulfate adenylyltransferase, small subunit K00957 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 459.0
YYD1_k127_1253008_1 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00956 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 465.0
YYD1_k127_1253008_10 Sulfite exporter TauE/SafE - - - 0.00006612 46.0
YYD1_k127_1253008_2 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000001938 254.0
YYD1_k127_1253008_3 Belongs to the PAPS reductase family. CysH subfamily K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000000002324 239.0
YYD1_k127_1253008_4 TIGRFAM D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000004554 190.0
YYD1_k127_1253008_5 Glycosyltransferase family 9 (heptosyltransferase) K02841,K02843 - - 0.0000000000000000000000000000000000000000000001124 184.0
YYD1_k127_1253008_6 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000000000001685 173.0
YYD1_k127_1253008_7 PFAM PfkB domain protein K00856 - 2.7.1.20 0.0000000000000000000000000000000000002507 146.0
YYD1_k127_1253008_8 Phospholipid methyltransferase - - - 0.00000000000000000000002391 106.0
YYD1_k127_1253008_9 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00005823 51.0
YYD1_k127_1281996_0 Peptidase family M1 domain - - - 3.655e-236 742.0
YYD1_k127_1281996_1 homoserine kinase activity K00823,K07250 - 2.6.1.19,2.6.1.22 3.675e-210 683.0
YYD1_k127_1281996_2 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004048 501.0
YYD1_k127_1281996_3 Amidinotransferase K01482 - 3.5.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006798 271.0
YYD1_k127_1281996_4 Domain of unknown function (DUF1330) - - - 0.00000000000000000000000000003141 124.0
YYD1_k127_1281996_5 pathogenesis - - - 0.000000000006898 74.0
YYD1_k127_1295257_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 408.0
YYD1_k127_1295257_1 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 312.0
YYD1_k127_1295257_2 O-methyltransferase - - - 0.000000000000000000000000000006901 128.0
YYD1_k127_1295257_3 oxidoreductase activity - - - 0.0000000000001481 83.0
YYD1_k127_1295257_4 Carboxypeptidase regulatory-like domain - - - 0.0000000000002807 77.0
YYD1_k127_1295257_5 response regulator receiver - - - 0.00000000007374 69.0
YYD1_k127_1318530_0 NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 600.0
YYD1_k127_1318530_1 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 572.0
YYD1_k127_1318530_2 Proton-conducting membrane transporter K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009112 388.0
YYD1_k127_1318530_3 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004878 318.0
YYD1_k127_1318530_4 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000007052 164.0
YYD1_k127_1318530_5 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000000000001422 124.0
YYD1_k127_1318530_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000000001533 123.0
YYD1_k127_136726_0 symporter activity K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 380.0
YYD1_k127_136726_1 Major facilitator Superfamily K08223 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 363.0
YYD1_k127_136726_2 Domain of unknown function (DUF5009) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 348.0
YYD1_k127_136726_3 PFAM peptidase S58, DmpA K01266 - 3.4.11.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 336.0
YYD1_k127_136726_4 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000006827 273.0
YYD1_k127_136726_5 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000579 137.0
YYD1_k127_136726_6 domain protein K14194 - - 0.00000000000000000000000001386 128.0
YYD1_k127_1390578_0 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 1.793e-232 731.0
YYD1_k127_1390578_1 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 443.0
YYD1_k127_1390578_10 Cyclic nucleotide-monophosphate binding domain - - - 0.0002248 52.0
YYD1_k127_1390578_2 Glycosyl hydrolase family 10 K01181 - 3.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006246 402.0
YYD1_k127_1390578_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007448 400.0
YYD1_k127_1390578_4 Dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 386.0
YYD1_k127_1390578_5 3-hydroxyacyl-CoA dehydrogenase domain protein K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 370.0
YYD1_k127_1390578_6 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 327.0
YYD1_k127_1390578_7 gtp cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000006201 260.0
YYD1_k127_1390578_8 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000004393 142.0
YYD1_k127_1390578_9 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.00000000000000000000000000164 118.0
YYD1_k127_1396629_0 protein kinase activity K01972,K02342,K04096 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 2.7.7.7,6.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007496 356.0
YYD1_k127_1396629_1 cAMP biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000001289 199.0
YYD1_k127_1396629_2 Dodecin K09165 - - 0.000000000000000006786 93.0
YYD1_k127_1396629_3 N-acetyltransferase - - - 0.000000000000003861 89.0
YYD1_k127_1396629_4 Major facilitator superfamily K03762 - - 0.00000000006435 64.0
YYD1_k127_1396629_5 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019904,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701 - 0.0000004461 63.0
YYD1_k127_141270_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1097.0
YYD1_k127_141270_1 ATPase activity K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 300.0
YYD1_k127_141270_2 Molybdate ABC transporter K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000001277 244.0
YYD1_k127_141270_3 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.0000000000000000000000000000000000000000000000000000000002126 219.0
YYD1_k127_141270_4 Bacterial extracellular solute-binding protein K02020 - - 0.000000000000000000000000000000000000000002585 166.0
YYD1_k127_141270_5 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000008032 155.0
YYD1_k127_141270_6 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000228 156.0
YYD1_k127_141270_7 Sigma-70 region 2 K03088 - - 0.000000006327 59.0
YYD1_k127_1446165_0 MacB-like periplasmic core domain - - - 3.425e-307 962.0
YYD1_k127_1446165_1 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 620.0
YYD1_k127_1446165_2 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 410.0
YYD1_k127_1446165_3 pfkB family carbohydrate kinase K18478 - 2.7.1.184 0.000000000000000000000000000000000000000000000000000457 199.0
YYD1_k127_1446165_4 Methyltransferase domain - - - 0.0001564 51.0
YYD1_k127_1446165_5 Beta-lactamase class C and other penicillin binding - - - 0.000958 45.0
YYD1_k127_14598_0 Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 1.259e-216 683.0
YYD1_k127_14598_1 Belongs to the ABC transporter superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000859 350.0
YYD1_k127_14598_2 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 348.0
YYD1_k127_14598_3 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 314.0
YYD1_k127_14598_4 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000002485 237.0
YYD1_k127_147666_0 Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006383 409.0
YYD1_k127_147666_1 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 419.0
YYD1_k127_147666_2 Flavin containing amine oxidoreductase K06954 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 375.0
YYD1_k127_147666_3 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 316.0
YYD1_k127_147666_4 Protein of unknown function (DUF1365) K09701 - - 0.00000000000000000000000000000000000000000000000000000000000000002266 246.0
YYD1_k127_147666_5 Thioesterase superfamily - - - 0.000000000000000000000000000000000002623 145.0
YYD1_k127_147666_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000009761 65.0
YYD1_k127_1477345_0 electron transfer activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009717 412.0
YYD1_k127_1477345_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 422.0
YYD1_k127_1477345_10 AAA ATPase domain - - - 0.0002936 53.0
YYD1_k127_1477345_2 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 343.0
YYD1_k127_1477345_3 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 326.0
YYD1_k127_1477345_4 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000093 205.0
YYD1_k127_1477345_5 YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the K09780 - - 0.00000000000000000000000000000000000002777 145.0
YYD1_k127_1477345_6 TIR domain - - - 0.00000000000000000000000000000000000004897 164.0
YYD1_k127_1477345_7 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000004194 123.0
YYD1_k127_1477345_8 TIGRFAM hydrogenase (NiFe) small subunit HydA K06282 - 1.12.99.6 0.00000000000007158 74.0
YYD1_k127_1481074_0 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005888 412.0
YYD1_k127_1481074_1 His Kinase A (phosphoacceptor) domain K02484 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000003092 229.0
YYD1_k127_1481074_2 PFAM response regulator receiver - - - 0.000000000000000006175 96.0
YYD1_k127_1481074_3 cheY-homologous receiver domain K07658 - - 0.00000000000000002067 94.0
YYD1_k127_1495293_0 Phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009477 452.0
YYD1_k127_1495293_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006161 386.0
YYD1_k127_1495293_2 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000002017 216.0
YYD1_k127_1495293_3 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000872 132.0
YYD1_k127_1495293_4 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000000000008043 84.0
YYD1_k127_1557752_0 ABC transporter C-terminal domain K06158 - - 1.758e-205 659.0
YYD1_k127_1557752_1 PFAM ATP-binding region, ATPase domain protein K02668,K07708,K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000108 215.0
YYD1_k127_1557752_2 response regulator K07713 - - 0.00000000000000000000008364 101.0
YYD1_k127_1557752_3 two component, sigma54 specific, transcriptional regulator, Fis family K02667 - - 0.0000000000000000000001566 104.0
YYD1_k127_1573672_0 FGGY family of carbohydrate kinases, C-terminal domain - - - 2.023e-224 709.0
YYD1_k127_1573672_1 Alpha-L-arabinofuranosidase C-terminal domain K01209 - 3.2.1.55 2.701e-219 686.0
YYD1_k127_1573672_2 links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source K03077 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008742,GO:0009056,GO:0009058,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019566,GO:0019568,GO:0019569,GO:0019572,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046373,GO:0046872,GO:0046914,GO:0051167,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901159,GO:1901575,GO:1901576 5.1.3.4 0.000000000000000000000000000000000000000000000000000000000000365 219.0
YYD1_k127_1579152_0 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 1.002e-232 730.0
YYD1_k127_1579152_1 hydrolase, family 65, central catalytic K15923 - 3.2.1.51 1.8e-227 728.0
YYD1_k127_1579152_2 PfkB domain protein K00874 - 2.7.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009912 595.0
YYD1_k127_1579152_3 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 570.0
YYD1_k127_1579152_4 alpha-L-fucosidase K15923 - 3.2.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 345.0
YYD1_k127_1579152_5 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate K03473 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0033711,GO:0034641,GO:0036001,GO:0036094,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.290 0.00000000000000002137 87.0
YYD1_k127_1733512_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 606.0
YYD1_k127_1733512_1 Belongs to the glycosyl hydrolase 67 family K01235 - 3.2.1.139 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 501.0
YYD1_k127_1733512_10 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.0000000000000000000000000000000000000003339 157.0
YYD1_k127_1733512_11 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000002497 140.0
YYD1_k127_1733512_12 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.00000000000000000000000000000002537 126.0
YYD1_k127_1733512_13 ABC-type transport system involved in multi-copper enzyme maturation permease component K01992 - - 0.00000000000000001823 93.0
YYD1_k127_1733512_14 PFAM AIG2 family protein K20757 - 4.3.1.27 0.00000000000000003543 90.0
YYD1_k127_1733512_15 Belongs to the peptidase S8 family - - - 0.000002372 59.0
YYD1_k127_1733512_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008463 414.0
YYD1_k127_1733512_3 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004778 340.0
YYD1_k127_1733512_4 ROK family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004735 336.0
YYD1_k127_1733512_5 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 316.0
YYD1_k127_1733512_6 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 330.0
YYD1_k127_1733512_7 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 302.0
YYD1_k127_1733512_8 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000008441 235.0
YYD1_k127_1733512_9 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000002857 216.0
YYD1_k127_1757669_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 505.0
YYD1_k127_1757669_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004338 303.0
YYD1_k127_1757669_2 PIN domain - - - 0.000000005978 63.0
YYD1_k127_176420_0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 383.0
YYD1_k127_176420_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008877 302.0
YYD1_k127_176420_2 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004216 250.0
YYD1_k127_176420_3 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000007206 248.0
YYD1_k127_176420_4 glycosyl transferase group 1 K00754 - - 0.00000000000000000000000000000000000000000000000000000000000000004748 243.0
YYD1_k127_176420_5 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000006216 221.0
YYD1_k127_176420_6 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000001486 197.0
YYD1_k127_176420_7 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000002412 184.0
YYD1_k127_176420_8 PFAM phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.00000000000000000000000000000008745 135.0
YYD1_k127_176420_9 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000005285 126.0
YYD1_k127_1768426_0 aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007947 555.0
YYD1_k127_1768426_1 D-aminoacylase domain protein K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008578 486.0
YYD1_k127_1768426_2 Sodium:solute symporter family - - - 0.0000000000000000000000000000000000000000000000000000001148 199.0
YYD1_k127_1768426_3 DNA-templated transcription, initiation - - - 0.00000000000000000000000000001201 125.0
YYD1_k127_1768426_5 Threonine dehydratase K01754 - 4.3.1.19 0.00003002 48.0
YYD1_k127_1769400_0 Oxidoreductase - - - 1.916e-268 837.0
YYD1_k127_1769400_1 PFAM Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 1.836e-201 649.0
YYD1_k127_1769400_2 RsbT co-antagonist protein rsbRD N-terminal domain K17763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 325.0
YYD1_k127_1769400_3 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000005746 218.0
YYD1_k127_1769400_4 Gluconate 2-dehydrogenase subunit 3 - - - 0.000000000000000000000000000000000000000000000004692 182.0
YYD1_k127_1769400_5 transporter antisigma-factor antagonist STAS K17762 - - 0.00000000000000000000000000000000000000000000141 178.0
YYD1_k127_1769400_6 - - - - 0.000000000000007137 85.0
YYD1_k127_1769400_7 spermidine synthase activity - - - 0.000000000005194 74.0
YYD1_k127_1781982_0 Prolyl oligopeptidase family - - - 2.035e-235 758.0
YYD1_k127_1781982_1 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 447.0
YYD1_k127_1781982_2 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000163 228.0
YYD1_k127_1781982_3 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000005534 195.0
YYD1_k127_1781982_4 serine threonine protein kinase K08884,K12132 GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701 2.7.11.1 0.0000000000000000000003614 98.0
YYD1_k127_1781982_5 FHA domain protein - - - 0.00000000002314 76.0
YYD1_k127_1781982_6 Forkhead associated domain - - - 0.00000000004625 73.0
YYD1_k127_1782539_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1211.0
YYD1_k127_1782539_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 497.0
YYD1_k127_1782539_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0052855,GO:0052856,GO:0052857 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 422.0
YYD1_k127_1782539_3 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000001492 231.0
YYD1_k127_1782539_4 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000002212 129.0
YYD1_k127_1798716_0 Dehydrogenase E1 component K00164,K01616 GO:0000287,GO:0003674,GO:0003824,GO:0004591,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006103,GO:0008150,GO:0008152,GO:0008683,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016624,GO:0016740,GO:0016744,GO:0016829,GO:0016830,GO:0016831,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0019842,GO:0022900,GO:0030312,GO:0030976,GO:0032991,GO:0036094,GO:0040007,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0045333,GO:0046872,GO:0048037,GO:0050439,GO:0050662,GO:0051186,GO:0055114,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:1901363,GO:1901681,GO:1902494,GO:1990204,GO:1990234 1.2.4.2,4.1.1.71 0.0 1022.0
YYD1_k127_1798716_1 COG0187 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02470,K02622 - 5.99.1.3 7.21e-285 888.0
YYD1_k127_1798716_10 TIGRFAM Hydrogenase accessory protein HypB K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 297.0
YYD1_k127_1798716_11 beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006234 294.0
YYD1_k127_1798716_12 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002824 270.0
YYD1_k127_1798716_13 phenazine biosynthesis protein PhzF family K06998 - 5.3.3.17 0.000000000000000000000000000000000000000000000000000000000000003548 227.0
YYD1_k127_1798716_14 Rubrerythrin K22336 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000003033 201.0
YYD1_k127_1798716_15 Protein of unknown function (DUF1572) - - - 0.0000000000000000000000000000000000000000000000000003109 191.0
YYD1_k127_1798716_16 - - - - 0.0000000000000000000000000000000000000000000004234 179.0
YYD1_k127_1798716_17 Toxic component of a toxin-antitoxin (TA) module. An RNase K07065 - - 0.00000000000000000000000000000000000003176 149.0
YYD1_k127_1798716_18 DinB superfamily - - - 0.00000000000000000000000000000000002173 141.0
YYD1_k127_1798716_19 Protein of unknown function (DUF2721) - - - 0.000000000000000000000000000000291 129.0
YYD1_k127_1798716_2 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 5.382e-280 883.0
YYD1_k127_1798716_20 carbon dioxide binding K04653,K04654 - - 0.000000000000000000000000006193 117.0
YYD1_k127_1798716_21 Transcription factor zinc-finger - - - 0.00000000000000000000000001021 122.0
YYD1_k127_1798716_22 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000000006507 114.0
YYD1_k127_1798716_23 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000006446 115.0
YYD1_k127_1798716_25 Protein of unknown function (DUF763) K09003 - - 0.00000003294 55.0
YYD1_k127_1798716_27 EF-hand domain pair - - - 0.00006354 54.0
YYD1_k127_1798716_3 topoisomerase K02469 - 5.99.1.3 1.272e-277 874.0
YYD1_k127_1798716_4 Belongs to the HypD family K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 483.0
YYD1_k127_1798716_5 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008084 441.0
YYD1_k127_1798716_6 hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 415.0
YYD1_k127_1798716_7 NapC/NirT cytochrome c family, N-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 420.0
YYD1_k127_1798716_8 formate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008951 349.0
YYD1_k127_1798716_9 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 329.0
YYD1_k127_1805174_0 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 606.0
YYD1_k127_1805174_1 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 378.0
YYD1_k127_1805174_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 343.0
YYD1_k127_1805174_3 Domain of unknown function (DUF4010) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 307.0
YYD1_k127_1805174_4 photoreceptor activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001151 293.0
YYD1_k127_1805174_5 cystathionine gamma-synthase activity K01739,K01758,K01760,K01761 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004121,GO:0004123,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48,4.4.1.1,4.4.1.11,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000003585 233.0
YYD1_k127_1805174_6 Pfam Response regulator receiver - - - 0.00000000000000000000000000000000537 146.0
YYD1_k127_1805174_7 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000001224 109.0
YYD1_k127_1805174_8 COG0457 FOG TPR repeat - - - 0.0000002704 62.0
YYD1_k127_1805174_9 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589,K13052 - - 0.0001157 51.0
YYD1_k127_1807258_0 Gamma-glutamyltranspeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 538.0
YYD1_k127_1807258_1 Highly conserved protein containing a thioredoxin domain K06888 - - 0.00000000000000000000000000000004488 138.0
YYD1_k127_1807258_2 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.00008796 56.0
YYD1_k127_1807258_3 Cyclic nucleotide-monophosphate binding domain - - - 0.0003164 52.0
YYD1_k127_1815337_0 Ferredoxin - - - 0.0000000000000000000000000000000002659 136.0
YYD1_k127_1815337_1 cheY-homologous receiver domain - - - 0.0000000000000000000000000665 110.0
YYD1_k127_1815337_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000005569 104.0
YYD1_k127_1815337_4 general secretion pathway protein - - - 0.0001126 50.0
YYD1_k127_1823289_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 428.0
YYD1_k127_1823289_1 ATP synthesis coupled electron transport K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000658 362.0
YYD1_k127_1823289_2 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007477 368.0
YYD1_k127_1823289_3 aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002761 274.0
YYD1_k127_1823289_4 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000003149 181.0
YYD1_k127_1823289_5 Diacylglycerol kinase catalytic domain (presumed) - - - 0.000000000000000000000000000000000000000002908 169.0
YYD1_k127_1823289_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0007117 52.0
YYD1_k127_1826449_0 PFAM glycoside hydrolase family 39 K01198 - 3.2.1.37 1.569e-230 730.0
YYD1_k127_1826449_1 ABC-type sugar transport system periplasmic component K10439 - - 0.000000000000000000000000000000000000000000000000002778 191.0
YYD1_k127_1826449_2 Histidine kinase K14980 - 2.7.13.3 0.00000000000000000000000000000000000000000000000001233 189.0
YYD1_k127_1826449_3 - - - - 0.0000001244 57.0
YYD1_k127_1828229_0 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005673 604.0
YYD1_k127_1828229_1 COG1070 Sugar (pentulose and hexulose) K00848 - 2.7.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 462.0
YYD1_k127_1828229_2 myo-inosose-2 dehydratase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000471 400.0
YYD1_k127_1828229_3 Helix-hairpin-helix motif K02237 - - 0.0000000000000000000000005074 111.0
YYD1_k127_1848743_0 Angiotensin-converting enzyme K01283 - 3.4.15.1 2.625e-196 623.0
YYD1_k127_1848743_1 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 496.0
YYD1_k127_1848743_2 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003536 476.0
YYD1_k127_1848743_3 oxidoreductase activity - - - 0.00000000000001761 86.0
YYD1_k127_1848743_4 photosystem II stabilization - - - 0.00000008337 65.0
YYD1_k127_1892714_0 cobalamin-transporting ATPase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 364.0
YYD1_k127_1892714_1 Belongs to the UPF0271 (lamB) family K07160 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009987 302.0
YYD1_k127_1892714_2 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000007242 214.0
YYD1_k127_1892714_3 Cytidine and deoxycytidylate deaminase zinc-binding region - - - 0.000000000000000000000000000000000000000000000000003951 183.0
YYD1_k127_1892714_4 Protein of unknown function (DUF1624) - - - 0.0000000000000000000000000003208 127.0
YYD1_k127_1892714_5 DNA-sulfur modification-associated - - - 0.000000000000003356 87.0
YYD1_k127_1893346_0 Glutamine amidotransferases class-II K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 607.0
YYD1_k127_1893346_1 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000004797 126.0
YYD1_k127_1893346_2 HEAT repeat - - - 0.0008571 51.0
YYD1_k127_1893491_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000006684 203.0
YYD1_k127_1893491_1 bacterial-type flagellum-dependent cell motility - - - 0.0000004698 62.0
YYD1_k127_1893491_2 NHL repeat containing protein - - - 0.000002103 61.0
YYD1_k127_1920009_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 472.0
YYD1_k127_1920009_1 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004221 426.0
YYD1_k127_1920009_2 acyl-CoA dehydrogenase activity K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000002836 223.0
YYD1_k127_2020178_0 beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005078 503.0
YYD1_k127_2020178_1 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 475.0
YYD1_k127_2020178_2 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000001494 179.0
YYD1_k127_2025397_0 Glycogen debranching enzyme K05989 - 3.2.1.40 0.0 1217.0
YYD1_k127_2025397_1 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003794 494.0
YYD1_k127_2025397_2 hemerythrin HHE cation binding domain - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000004061 249.0
YYD1_k127_2026716_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 4.044e-221 703.0
YYD1_k127_2026716_1 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000006417 207.0
YYD1_k127_2026716_2 Yip1 domain - - - 0.00000000001366 74.0
YYD1_k127_2026716_3 Biotin-lipoyl like K02005 - - 0.00000005348 64.0
YYD1_k127_2026716_4 long-chain fatty acid transporting porin activity - - - 0.000005336 58.0
YYD1_k127_2030104_0 Putative glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000694 529.0
YYD1_k127_2030104_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 392.0
YYD1_k127_2030104_2 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 342.0
YYD1_k127_2030104_3 Peptidase dimerisation domain K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 304.0
YYD1_k127_2030104_4 Belongs to the DapB family K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000001613 207.0
YYD1_k127_2030104_5 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000002788 100.0
YYD1_k127_2038810_0 N-terminal half of MaoC dehydratase - - - 0.0000000000000000000000000000000000001453 146.0
YYD1_k127_2038810_1 COG3670 Lignostilbene-alpha,beta-dioxygenase and related enzymes - - - 0.000000000000000000000000001544 122.0
YYD1_k127_2038810_2 GDSL-like Lipase/Acylhydrolase - - - 0.0000000002634 74.0
YYD1_k127_2038810_3 DinB superfamily - - - 0.0003659 50.0
YYD1_k127_2039003_0 Domain of unknown function (DUF4445) - - - 1.379e-239 751.0
YYD1_k127_2039003_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 1.291e-216 698.0
YYD1_k127_2039003_10 Oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000003993 247.0
YYD1_k127_2039003_11 - - - - 0.000000000000000000000000000000000000000000000000004877 192.0
YYD1_k127_2039003_12 - - - - 0.00000000000000000000000000000000002157 139.0
YYD1_k127_2039003_13 Paraquat-inducible protein A - - - 0.000000000000000000000003204 112.0
YYD1_k127_2039003_15 Protein of unknown function (DUF1697) - - - 0.00000000353 58.0
YYD1_k127_2039003_16 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000005421 60.0
YYD1_k127_2039003_2 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 2.16e-209 653.0
YYD1_k127_2039003_3 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 559.0
YYD1_k127_2039003_4 COGs COG4299 conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005842 470.0
YYD1_k127_2039003_5 Homocysteine S-methyltransferase K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 464.0
YYD1_k127_2039003_6 PFAM Trehalose utilisation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 380.0
YYD1_k127_2039003_7 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005922 367.0
YYD1_k127_2039003_8 Protein of unknown function (DUF1722) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 358.0
YYD1_k127_2039003_9 methionine synthase K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001535 285.0
YYD1_k127_2050383_0 serine-type peptidase activity - - - 0.0 1113.0
YYD1_k127_2050383_1 Amino acid kinase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 535.0
YYD1_k127_2050383_2 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007831 514.0
YYD1_k127_2050383_3 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000024 168.0
YYD1_k127_2074114_0 Two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007254 519.0
YYD1_k127_2074114_1 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 427.0
YYD1_k127_2074114_2 PFAM Formiminotransferase K00603 - 2.1.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008172 364.0
YYD1_k127_2074114_3 Belongs to the CinA family K03742 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009634 328.0
YYD1_k127_2074114_4 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000004178 185.0
YYD1_k127_2074114_5 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000009906 144.0
YYD1_k127_2074114_6 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000002598 128.0
YYD1_k127_2074114_7 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000000001503 122.0
YYD1_k127_2074114_8 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000004404 91.0
YYD1_k127_2074114_9 Domain of unknown function (DUF4390) - - - 0.00000000002329 74.0
YYD1_k127_2081019_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 0.000000000000000000000000001947 113.0
YYD1_k127_2081019_1 oxidoreductase activity - - - 0.000000000000002219 91.0
YYD1_k127_2081019_2 TIGRFAM VWFA-related Acidobacterial domain - - - 0.0000000000001298 85.0
YYD1_k127_2081019_3 Glucose dehydrogenase K00117 - 1.1.5.2 0.0002999 44.0
YYD1_k127_2084782_0 domain protein - - - 2.267e-256 829.0
YYD1_k127_2084782_1 radical SAM domain protein K22318 - - 3.772e-236 742.0
YYD1_k127_2084782_2 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 415.0
YYD1_k127_2084782_3 tryptophan 2,3-dioxygenase activity K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007998 348.0
YYD1_k127_2084782_4 PFAM Hemerythrin HHE cation binding domain K09155 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001523 271.0
YYD1_k127_2084782_5 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000007507 143.0
YYD1_k127_2084782_6 protein related to plant photosystem II stability assembly factor - - - 0.0006071 51.0
YYD1_k127_2119042_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 1.114e-236 740.0
YYD1_k127_2119042_1 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 6.44e-211 662.0
YYD1_k127_2119042_10 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.0000000000000000000000001099 108.0
YYD1_k127_2119042_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004148,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006103,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006520,GO:0006544,GO:0006546,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009058,GO:0009063,GO:0009069,GO:0009071,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015036,GO:0016054,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0017144,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019464,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036094,GO:0036211,GO:0042133,GO:0042135,GO:0042737,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0043648,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045250,GO:0045252,GO:0045254,GO:0046390,GO:0046395,GO:0046483,GO:0046496,GO:0046872,GO:0046914,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0065007,GO:0065008,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0097159,GO:0106077,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 3.186e-198 627.0
YYD1_k127_2119042_3 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 611.0
YYD1_k127_2119042_4 von Willebrand factor (vWF) type A domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004739 510.0
YYD1_k127_2119042_5 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005249 474.0
YYD1_k127_2119042_6 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 351.0
YYD1_k127_2119042_7 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000004568 240.0
YYD1_k127_2119042_8 glycerophosphodiester phosphodiesterase activity K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000325 198.0
YYD1_k127_2119042_9 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000001652 151.0
YYD1_k127_2122226_0 Sodium:solute symporter family K14393 - - 7.804e-236 743.0
YYD1_k127_2122226_1 response regulator - - - 3.748e-194 614.0
YYD1_k127_2122226_10 - - - - 0.000000000000000000000000004689 127.0
YYD1_k127_2122226_11 Cupin 2, conserved barrel domain protein K11477 - - 0.0000000000000000000000005367 107.0
YYD1_k127_2122226_12 Protein of unknown function, DUF485 - - - 0.0000000000000000000008577 100.0
YYD1_k127_2122226_13 benzoyl-CoA reductase K04112 - 1.3.7.8 0.000000000002865 67.0
YYD1_k127_2122226_14 Putative prokaryotic signal transducing protein - - - 0.00001494 50.0
YYD1_k127_2122226_2 benzoyl-CoA reductase K04113 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009199 601.0
YYD1_k127_2122226_3 BadF/BadG/BcrA/BcrD ATPase family K04114 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 459.0
YYD1_k127_2122226_4 HAMP domain K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 447.0
YYD1_k127_2122226_5 BadF/BadG/BcrA/BcrD ATPase family K04115 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 302.0
YYD1_k127_2122226_6 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006556 287.0
YYD1_k127_2122226_7 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000006133 222.0
YYD1_k127_2122226_8 Enoyl-(Acyl carrier protein) reductase K00023,K00059 - 1.1.1.100,1.1.1.36 0.00000000000000000000000000000000000000000006759 179.0
YYD1_k127_2122226_9 Peptidase family M54 K06974 - - 0.00000000000000000000000000000000000006655 157.0
YYD1_k127_2183131_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000039 567.0
YYD1_k127_2183131_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007252 385.0
YYD1_k127_2183131_10 4Fe-4S dicluster domain K00338 - 1.6.5.3 0.00000000000000000000000000001183 125.0
YYD1_k127_2183131_11 - - - - 0.000000000000003706 81.0
YYD1_k127_2183131_12 Peptidase family M28 - - - 0.00000000000002467 86.0
YYD1_k127_2183131_13 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000439 76.0
YYD1_k127_2183131_14 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000002175 61.0
YYD1_k127_2183131_15 RNA polymerase K03088 - - 0.0001742 47.0
YYD1_k127_2183131_16 Putative zinc-finger - - - 0.0003402 51.0
YYD1_k127_2183131_2 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005391 366.0
YYD1_k127_2183131_3 PFAM 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 325.0
YYD1_k127_2183131_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000002542 249.0
YYD1_k127_2183131_5 RNA polymerase sigma factor K03088 GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000003447 167.0
YYD1_k127_2183131_6 Histidine kinase K13598 - 2.7.13.3 0.000000000000000000000000000000000000000003471 175.0
YYD1_k127_2183131_7 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000004675 156.0
YYD1_k127_2183131_8 4Fe-4S dicluster domain K05524 - - 0.0000000000000000000000000000000000000001732 151.0
YYD1_k127_2183131_9 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.000000000000000000000000000002293 128.0
YYD1_k127_2188316_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 4.34e-207 653.0
YYD1_k127_2188316_1 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 327.0
YYD1_k127_2188316_2 L-fucose isomerase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006262 292.0
YYD1_k127_2188316_3 LysR substrate binding domain - - - 0.000000000000000000000000000000000001971 151.0
YYD1_k127_2188316_4 metallopeptidase activity K01179,K20276 - 3.2.1.4 0.000001946 57.0
YYD1_k127_2188316_5 Ammonium Transporter K03320 - - 0.0000402 49.0
YYD1_k127_2189344_0 ACT domain K12524 - 1.1.1.3,2.7.2.4 4.899e-225 745.0
YYD1_k127_2189344_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 2.935e-219 709.0
YYD1_k127_2189344_2 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009079 601.0
YYD1_k127_2189344_3 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.00000000000000000000000000002262 120.0
YYD1_k127_219962_0 Probably functions as a manganese efflux pump - - - 0.000000000000000000000000000000000000000000008466 183.0
YYD1_k127_219962_1 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000000000000008089 119.0
YYD1_k127_219962_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000884 113.0
YYD1_k127_219962_3 - - - - 0.00000000000000002883 96.0
YYD1_k127_2217709_0 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001418 289.0
YYD1_k127_2217709_1 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005017 273.0
YYD1_k127_2217709_2 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003861 254.0
YYD1_k127_2217709_3 methyltransferase K16048 - - 0.00000000000000000000000000000000000000000000000006154 202.0
YYD1_k127_2217709_4 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000002578 175.0
YYD1_k127_2217709_5 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000002626 175.0
YYD1_k127_2217709_6 PFAM Abortive infection protein - - - 0.00003667 53.0
YYD1_k127_223667_0 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000065 501.0
YYD1_k127_223667_1 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417 354.0
YYD1_k127_223667_2 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000000000006923 144.0
YYD1_k127_2257141_0 cellulose binding - - - 1.436e-298 957.0
YYD1_k127_2257141_1 cellulose binding - - - 2.672e-295 940.0
YYD1_k127_2257141_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 343.0
YYD1_k127_2257141_3 transport, permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 334.0
YYD1_k127_2257141_4 transport, permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006939 327.0
YYD1_k127_2257141_5 poly(3-hydroxybutyrate) depolymerase activity K07019 GO:0003674,GO:0003824,GO:0006629,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0044237,GO:0044238,GO:0044255,GO:0071704 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 309.0
YYD1_k127_2257141_6 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001583 243.0
YYD1_k127_2257141_7 PFAM LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000002161 196.0
YYD1_k127_2257141_8 DinB family - - - 0.000000000000000000000000000000000000007922 158.0
YYD1_k127_2257141_9 - - - - 0.00000000000000004356 95.0
YYD1_k127_2315330_0 Belongs to the peptidase M16 family K07263 - - 4.682e-202 661.0
YYD1_k127_2315330_1 MatE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 561.0
YYD1_k127_2315330_10 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000003177 173.0
YYD1_k127_2315330_11 Domain of unknown function (DUF4115) - - - 0.00000000000000000000001735 109.0
YYD1_k127_2315330_12 Cupin 2, conserved barrel domain protein - - - 0.0002133 52.0
YYD1_k127_2315330_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 494.0
YYD1_k127_2315330_3 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 455.0
YYD1_k127_2315330_4 beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 412.0
YYD1_k127_2315330_5 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 355.0
YYD1_k127_2315330_6 Belongs to the GHMP kinase family K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004508 355.0
YYD1_k127_2315330_7 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007484 266.0
YYD1_k127_2315330_8 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000057 237.0
YYD1_k127_2315330_9 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000157 225.0
YYD1_k127_2320440_0 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 413.0
YYD1_k127_2320440_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005237 321.0
YYD1_k127_2320440_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001902 302.0
YYD1_k127_2320440_3 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000005807 234.0
YYD1_k127_2320440_4 response regulator receiver K07668 - - 0.000000000000000000000000000000000000000000000000000000000178 215.0
YYD1_k127_2320440_5 Histidine kinase K07654 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.13.3 0.00000000000000000000000000000000000000003342 171.0
YYD1_k127_2320440_6 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K06187,K09747 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - 0.0000000000000000000000004834 117.0
YYD1_k127_2321583_0 Domain of unknown function (DUF1998) K06877 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 3.834e-270 855.0
YYD1_k127_2321583_1 Sodium:alanine symporter family K03310 - - 0.0000000000000000000000000000000000000000000000172 172.0
YYD1_k127_2321583_2 RNase_H superfamily K07502 - - 0.00000000000000000000000000000000000000000000005467 190.0
YYD1_k127_2327147_0 Zinc carboxypeptidase - - - 3.28e-319 1004.0
YYD1_k127_2327147_1 PFAM peptidase - - - 3.157e-210 665.0
YYD1_k127_2327147_2 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 293.0
YYD1_k127_2337749_0 PFAM UDP-glucose GDP-mannose dehydrogenase family, NAD binding domain K02472,K13015 - 1.1.1.136,1.1.1.336 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 599.0
YYD1_k127_2337749_1 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 574.0
YYD1_k127_2337749_10 PFAM Uncharacterised protein family (UPF0227) K07000 - - 0.000000000000000000000000000000000000000000491 168.0
YYD1_k127_2337749_11 - - - - 0.000000000000000000000000007186 122.0
YYD1_k127_2337749_12 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.000000000000000000000009404 106.0
YYD1_k127_2337749_13 - - - - 0.000000000000000000002129 102.0
YYD1_k127_2337749_14 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000002512 102.0
YYD1_k127_2337749_15 Domain of unknown function (DUF4956) - - - 0.000000000000001584 86.0
YYD1_k127_2337749_16 Transduction Histidine Kinase K07711 - 2.7.13.3 0.0000000000001483 80.0
YYD1_k127_2337749_2 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006656 441.0
YYD1_k127_2337749_3 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 412.0
YYD1_k127_2337749_4 Oxidoreductase molybdopterin binding domain K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004829 324.0
YYD1_k127_2337749_5 PLD-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 301.0
YYD1_k127_2337749_6 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002762 289.0
YYD1_k127_2337749_7 inositol 2-dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000003501 234.0
YYD1_k127_2337749_8 Protein of unknown function (DUF520) K09767 - - 0.000000000000000000000000000000000000000000000000000000000111 208.0
YYD1_k127_2337749_9 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.00000000000000000000000000000000000000000000003932 177.0
YYD1_k127_2371588_0 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005856 550.0
YYD1_k127_2371588_1 FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 473.0
YYD1_k127_2371588_2 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 383.0
YYD1_k127_2371588_3 FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 343.0
YYD1_k127_2371588_4 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000003619 81.0
YYD1_k127_2371588_5 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00001744 56.0
YYD1_k127_2375758_0 Involved in the tonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 453.0
YYD1_k127_2375758_1 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002633 278.0
YYD1_k127_2375758_2 TIGRFAM glutaredoxin-like domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000002912 239.0
YYD1_k127_2375758_3 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000000000000000000000000000000000003692 160.0
YYD1_k127_2375758_4 PHP domain protein - - - 0.000000000000000000000000000000004148 144.0
YYD1_k127_2390706_0 Dienelactone hydrolase family - - - 6.468e-275 867.0
YYD1_k127_2390706_1 Dienelactone hydrolase family - - - 1.475e-218 699.0
YYD1_k127_2390706_2 COG1228 Imidazolonepropionase and related K01443 - 3.5.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 576.0
YYD1_k127_2390706_3 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 329.0
YYD1_k127_2390706_4 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 290.0
YYD1_k127_2390706_5 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006722 288.0
YYD1_k127_2391377_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.15 7.944e-206 650.0
YYD1_k127_2391377_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 479.0
YYD1_k127_2391377_2 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005732 456.0
YYD1_k127_2391377_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001075 295.0
YYD1_k127_2391377_4 SMART Tetratricopeptide domain protein - - - 0.00000001058 68.0
YYD1_k127_2391377_5 Belongs to the ompA family K03640 GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032153,GO:0044425,GO:0044462,GO:0044464,GO:0051301,GO:0071944,GO:0098552 - 0.00001866 48.0
YYD1_k127_2391377_6 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 - - 0.0003989 50.0
YYD1_k127_2394645_0 Flavin containing amine oxidoreductase - - - 7.478e-285 884.0
YYD1_k127_2394645_1 TIGRFAM phytoene desaturase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009792 498.0
YYD1_k127_2394645_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 414.0
YYD1_k127_2394645_3 S23 ribosomal protein - - - 0.0000000000000000000000000000000000002067 144.0
YYD1_k127_2397854_0 MacB-like periplasmic core domain - - - 3.114e-271 860.0
YYD1_k127_2397854_1 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 7.786e-213 676.0
YYD1_k127_2397854_2 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005753 610.0
YYD1_k127_2397854_3 hydrolase family 20, catalytic K12373 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005555 551.0
YYD1_k127_2397854_4 redox protein, regulator of disulfide bond formation - - - 0.000000000000000000000000000000000000000005591 160.0
YYD1_k127_2397854_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000003726 76.0
YYD1_k127_2403446_0 PFAM amidohydrolase - - - 3.519e-230 730.0
YYD1_k127_2403446_1 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007985 363.0
YYD1_k127_2403446_2 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 296.0
YYD1_k127_2403446_3 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001941 276.0
YYD1_k127_2403446_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001397 281.0
YYD1_k127_2403446_5 Domain of Unknown Function (DUF349) - - - 0.000000000000000000000000000000000005935 148.0
YYD1_k127_2430712_0 Peptidase family M1 domain - - - 7.428e-245 766.0
YYD1_k127_2430712_1 Alpha-L-fucosidase K01206 - 3.2.1.51 2.046e-205 647.0
YYD1_k127_2430712_10 transcriptional regulator PadR family - - - 0.00000000000000000000001151 104.0
YYD1_k127_2430712_13 photoreceptor activity - - - 0.00000000002042 64.0
YYD1_k127_2430712_14 Pfam SEC-C motif - - - 0.0000002078 56.0
YYD1_k127_2430712_2 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 526.0
YYD1_k127_2430712_3 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 507.0
YYD1_k127_2430712_4 protein kinase related protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 480.0
YYD1_k127_2430712_5 protein kinase related protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 315.0
YYD1_k127_2430712_6 PFAM Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 287.0
YYD1_k127_2430712_7 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000553 275.0
YYD1_k127_2430712_8 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000001651 160.0
YYD1_k127_2430712_9 MacB-like periplasmic core domain - - - 0.000000000000000000000000003042 115.0
YYD1_k127_2437146_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0045333,GO:0046459,GO:0047456,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 2.685e-251 792.0
YYD1_k127_2437146_1 Prolyl oligopeptidase family - - - 1.631e-243 775.0
YYD1_k127_2437146_2 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 310.0
YYD1_k127_2437146_3 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008067 297.0
YYD1_k127_2437146_4 Belongs to the peptidase M16 family K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001652 269.0
YYD1_k127_2437146_5 - - - - 0.0000000001491 69.0
YYD1_k127_2437146_6 protein import - - - 0.000000001039 71.0
YYD1_k127_2437146_7 Calcineurin-like phosphoesterase superfamily domain - - - 0.00002194 55.0
YYD1_k127_2450511_0 Glycosyl hydrolase family 65, N-terminal domain K15923 - 3.2.1.51 5.026e-281 885.0
YYD1_k127_2450511_1 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 509.0
YYD1_k127_2450511_2 Alpha-L-arabinofuranosidase C-terminal domain K01209 - 3.2.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000006499 261.0
YYD1_k127_2450511_3 Preprotein translocase SecG subunit K03075 - - 0.0000000000000001093 83.0
YYD1_k127_247661_0 PLD-like domain K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 369.0
YYD1_k127_247661_1 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000008314 229.0
YYD1_k127_247661_2 Copper binding periplasmic protein CusF K07152 - - 0.0000000000000000000000000000000000000000000000000006391 194.0
YYD1_k127_247661_3 - - - - 0.00000000000000000000000000000000000000000000001082 188.0
YYD1_k127_247661_4 - - - - 0.00000000000000000000000000000000009446 145.0
YYD1_k127_247661_5 - - - - 0.000000000000001567 79.0
YYD1_k127_247661_6 RNA-binding - - - 0.00001043 49.0
YYD1_k127_2484982_0 Alpha-2-Macroglobulin K06894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 466.0
YYD1_k127_2484982_1 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) K01083 - 3.1.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001155 282.0
YYD1_k127_2484982_2 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000002061 198.0
YYD1_k127_2508305_0 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 3.491e-256 805.0
YYD1_k127_2508305_1 Ftsk_gamma K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 454.0
YYD1_k127_2508305_2 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007098 431.0
YYD1_k127_2508305_3 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 430.0
YYD1_k127_2508305_4 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001705 293.0
YYD1_k127_2508305_5 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000892 200.0
YYD1_k127_2508305_6 JAB/MPN domain - - - 0.0000000000000000123 87.0
YYD1_k127_25920_0 PFAM Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035 531.0
YYD1_k127_25920_1 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 403.0
YYD1_k127_25920_2 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 308.0
YYD1_k127_25920_3 DNA-templated transcription, initiation - - - 0.00000000000000000000000000000000000000000000000000000000000412 223.0
YYD1_k127_25920_4 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000000000000005206 175.0
YYD1_k127_25920_5 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0030312,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0071704,GO:0071944,GO:0140096,GO:1901564 5.2.1.8 0.0000000000000000000000000000000000000001098 154.0
YYD1_k127_25920_6 Haem-binding domain - - - 0.00000000000000000000000000001156 124.0
YYD1_k127_25920_7 Endoribonuclease L-PSP - - - 0.00000000000000000005238 105.0
YYD1_k127_25920_8 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000001443 97.0
YYD1_k127_25920_9 Endoribonuclease L-PSP - - - 0.0000000003626 73.0
YYD1_k127_2614305_0 Glycosyltransferase 36 associated - - - 0.0 2479.0
YYD1_k127_2614305_1 Zinc carboxypeptidase - - - 0.0 1161.0
YYD1_k127_2614305_10 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002087 293.0
YYD1_k127_2614305_11 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005217 262.0
YYD1_k127_2614305_12 phosphoprotein phosphatase activity K14680 - 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000003979 257.0
YYD1_k127_2614305_13 Pfam:Methyltransf_6 - - - 0.00000000000000000000000000000000000000000000000000000000000000000007554 243.0
YYD1_k127_2614305_14 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000004387 242.0
YYD1_k127_2614305_15 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000004563 217.0
YYD1_k127_2614305_16 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.00000000000000000000000000000000000000000000000000000003349 207.0
YYD1_k127_2614305_17 Domain of Unknown Function (DUF1206) - - - 0.00000000000000000000000000000000000000000000000000000006115 209.0
YYD1_k127_2614305_18 homoserine dehydrogenase K00003,K12524 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 1.1.1.3,2.7.2.4 0.000000000000000000000000000000000000000000000000001571 197.0
YYD1_k127_2614305_19 - - - - 0.00000000000000000000000000000000003473 138.0
YYD1_k127_2614305_2 metallopeptidase activity K01179 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0016052,GO:0016787,GO:0016798,GO:0033946,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0052736,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 3.2.1.4 9.561e-236 741.0
YYD1_k127_2614305_20 LysE type translocator - - - 0.000000000000000000000000001917 119.0
YYD1_k127_2614305_21 Thioesterase superfamily K07107 - - 0.000000000000000000000009405 108.0
YYD1_k127_2614305_22 PFAM Polysaccharide deacetylase - - - 0.0000000000000000000001904 110.0
YYD1_k127_2614305_23 Disulphide bond corrector protein DsbC - - - 0.00000000000000009559 92.0
YYD1_k127_2614305_24 pyridoxamine 5-phosphate - - - 0.0000000002038 70.0
YYD1_k127_2614305_25 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000002827 57.0
YYD1_k127_2614305_3 COG0644 Dehydrogenases (flavoproteins) - - - 6.611e-209 659.0
YYD1_k127_2614305_4 efflux transmembrane transporter activity K02004 - - 9.636e-194 632.0
YYD1_k127_2614305_5 ROK family K00845,K13967,K19979,K20433 - 2.7.1.188,2.7.1.2,2.7.1.214,2.7.1.60,5.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932 579.0
YYD1_k127_2614305_6 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 503.0
YYD1_k127_2614305_7 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000447 466.0
YYD1_k127_2614305_8 cell redox homeostasis K00384,K12057,K12267,K21636 - 1.1.98.6,1.8.1.9,1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008713 403.0
YYD1_k127_2614305_9 flavin-nucleotide-binding protein structurally related to pyridoxine 5-phosphate oxidase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008428 401.0
YYD1_k127_261840_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005973 570.0
YYD1_k127_261840_1 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006481 471.0
YYD1_k127_261840_10 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00008724 55.0
YYD1_k127_261840_2 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 411.0
YYD1_k127_261840_3 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002265 350.0
YYD1_k127_261840_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 297.0
YYD1_k127_261840_5 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001324 280.0
YYD1_k127_261840_6 Putative cyclase K07130 - 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000006666 225.0
YYD1_k127_261840_7 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000001017 143.0
YYD1_k127_261840_8 Domain of unknown function (DUF362) - - - 0.000000000000000000000004708 104.0
YYD1_k127_261840_9 lysine biosynthetic process via aminoadipic acid - - - 0.0000008019 51.0
YYD1_k127_2619346_0 cellulose binding - - - 3.835e-291 926.0
YYD1_k127_2619346_1 PFAM Glutamine cyclotransferase K00683 - 2.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007067 319.0
YYD1_k127_2619346_11 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.000000000007721 69.0
YYD1_k127_2619346_2 peptidase activity K06889 - - 0.0000000000000000000000000000000000000000000000002034 192.0
YYD1_k127_2619346_3 - - - - 0.00000000000000000000000000000000000000004734 167.0
YYD1_k127_2619346_4 GtrA-like protein - - - 0.000000000000000000000001877 117.0
YYD1_k127_2619346_5 - - - - 0.00000000000000000000001898 111.0
YYD1_k127_2619346_6 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000000005074 94.0
YYD1_k127_2619346_8 Aminotransferase class-V - - - 0.00000000000007322 76.0
YYD1_k127_2619346_9 SnoaL-like polyketide cyclase - - - 0.0000000000007061 82.0
YYD1_k127_2624668_0 gluconolactonase K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 431.0
YYD1_k127_2624668_1 Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008767 287.0
YYD1_k127_2624668_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006483 270.0
YYD1_k127_2629258_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine - - - 2.378e-269 842.0
YYD1_k127_2629258_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006605 316.0
YYD1_k127_2645520_0 Aldo/keto reductase family K05882 - 1.1.1.91 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008678 488.0
YYD1_k127_2645520_1 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 511.0
YYD1_k127_2645520_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005933 314.0
YYD1_k127_2645520_3 NYN domain - - - 0.000000000000000000000000000000000000000000000000000009925 203.0
YYD1_k127_2646808_0 Domain of unknown function (DUF5107) - - - 1.04e-259 837.0
YYD1_k127_2646808_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 6.954e-204 661.0
YYD1_k127_2646808_2 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000000000000000000000000000000000000000000001466 225.0
YYD1_k127_2651818_0 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007131 595.0
YYD1_k127_2651818_1 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 354.0
YYD1_k127_2651818_2 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K02003,K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008623 279.0
YYD1_k127_2651818_3 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000002405 160.0
YYD1_k127_2662136_0 TonB-dependent receptor - - - 0.0 1265.0
YYD1_k127_2662136_1 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 541.0
YYD1_k127_2662136_10 Belongs to the peptidase S11 family K01286,K07258,K07262 GO:0000003,GO:0000270,GO:0000910,GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0006022,GO:0006508,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016043,GO:0016787,GO:0019538,GO:0019954,GO:0022402,GO:0022414,GO:0030203,GO:0032505,GO:0042221,GO:0042493,GO:0042597,GO:0043093,GO:0043170,GO:0044238,GO:0044464,GO:0045229,GO:0050896,GO:0051301,GO:0070011,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0140096,GO:1901135,GO:1901564 3.4.16.4 0.00000000000000000000000000000000000000148 161.0
YYD1_k127_2662136_11 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000002792 142.0
YYD1_k127_2662136_12 Major facilitator superfamily K08161 - - 0.00000000000000000000000000000000006297 138.0
YYD1_k127_2662136_13 Polymer-forming cytoskeletal - - - 0.00000000000000000000000000002693 125.0
YYD1_k127_2662136_14 Necessary for formate dehydrogenase activity K02380 - - 0.00000000000000000021 98.0
YYD1_k127_2662136_15 methyltransferase - - - 0.000000001102 68.0
YYD1_k127_2662136_2 Acyl-CoA dehydrogenase, C-terminal domain K16173 - 1.3.99.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 497.0
YYD1_k127_2662136_3 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0000271,GO:0003674,GO:0003824,GO:0004373,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 460.0
YYD1_k127_2662136_4 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004735 425.0
YYD1_k127_2662136_5 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384,K03671,K22345 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9,4.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 423.0
YYD1_k127_2662136_6 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004968 399.0
YYD1_k127_2662136_7 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 374.0
YYD1_k127_2662136_8 methylase K00571 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 323.0
YYD1_k127_2662136_9 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000000002204 209.0
YYD1_k127_2742158_0 TonB-dependent receptor - - - 7.859e-312 992.0
YYD1_k127_2742158_1 Domain of unknown function (DUF4976) - - - 1.572e-257 801.0
YYD1_k127_2742158_2 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006002 511.0
YYD1_k127_2742158_3 Glycosyl transferases group 1 K12995 - 2.4.1.348 0.0000000000000000001603 88.0
YYD1_k127_2760158_0 Heavy metal translocating P-type atpase K01534 - 3.6.3.3,3.6.3.5 3.698e-194 627.0
YYD1_k127_2760158_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 475.0
YYD1_k127_2760158_10 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000002651 139.0
YYD1_k127_2760158_11 PFAM Bacterial regulatory protein, arsR family K21903 - - 0.0000000000000000000000000005564 120.0
YYD1_k127_2760158_12 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000187 123.0
YYD1_k127_2760158_13 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000001637 96.0
YYD1_k127_2760158_14 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000003381 87.0
YYD1_k127_2760158_16 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.00001536 55.0
YYD1_k127_2760158_2 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 400.0
YYD1_k127_2760158_3 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 358.0
YYD1_k127_2760158_4 PFAM asparagine synthase K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003725 279.0
YYD1_k127_2760158_5 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000628 260.0
YYD1_k127_2760158_6 Protein of unknown function (DUF2400) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001291 268.0
YYD1_k127_2760158_7 Belongs to the purine pyrimidine phosphoribosyltransferase family. PyrR subfamily K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000003278 244.0
YYD1_k127_2760158_8 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000001633 223.0
YYD1_k127_2760158_9 Methyltransferase type 12 - - - 0.0000000000000000000000000000000001846 141.0
YYD1_k127_2776878_0 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 397.0
YYD1_k127_2776878_1 Aminotransferase class I and II K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000871 213.0
YYD1_k127_2776878_2 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000007847 201.0
YYD1_k127_2776878_3 HupE / UreJ protein - - - 0.00000000000000001134 95.0
YYD1_k127_2898497_0 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 482.0
YYD1_k127_2898497_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003664 406.0
YYD1_k127_2898497_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006008 326.0
YYD1_k127_2898497_3 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 317.0
YYD1_k127_2898497_4 Tetratricopeptide repeat - - - 0.000000000000000000000000007401 117.0
YYD1_k127_2898497_5 Domains REC, sigma54 interaction, HTH8 - - - 0.0000000000000000005673 92.0
YYD1_k127_2898497_6 NifU-like domain - - - 0.00000000000000001782 84.0
YYD1_k127_2898497_7 Protein of unknown function (DUF2892) - - - 0.000000000000004719 79.0
YYD1_k127_2898497_8 Universal stress protein family - - - 0.0000000000001666 79.0
YYD1_k127_2905975_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 416.0
YYD1_k127_2905975_1 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009043 417.0
YYD1_k127_2905975_10 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000002731 64.0
YYD1_k127_2905975_11 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic - - - 0.000285 48.0
YYD1_k127_2905975_2 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 359.0
YYD1_k127_2905975_3 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000574 348.0
YYD1_k127_2905975_4 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 319.0
YYD1_k127_2905975_5 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007495 295.0
YYD1_k127_2905975_6 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 301.0
YYD1_k127_2905975_7 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000472 275.0
YYD1_k127_2905975_8 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000908 242.0
YYD1_k127_2905975_9 MraZ protein, putative antitoxin-like K03925 - - 0.0000000000000001225 85.0
YYD1_k127_2910723_0 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009446 541.0
YYD1_k127_2910723_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005216 428.0
YYD1_k127_2910723_2 ATPase activity K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002438 256.0
YYD1_k127_2910723_3 - - - - 0.000000000000000000000000000000000007069 141.0
YYD1_k127_2920434_0 Glycogen debranching enzyme N terminal - - - 9.891e-284 887.0
YYD1_k127_2920434_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007387 516.0
YYD1_k127_2920434_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 398.0
YYD1_k127_2920434_3 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431,K12251 - 3.5.1.53,3.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006328 367.0
YYD1_k127_2920434_4 Domain of unknown function (DUF3459) K01236 - 3.2.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000222 265.0
YYD1_k127_2920434_5 Lipocalin-like domain - - - 0.00000000000000000004278 98.0
YYD1_k127_2920434_6 Ankyrin repeat - - - 0.0000000474 62.0
YYD1_k127_2920434_7 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589,K13052 - - 0.0000003244 56.0
YYD1_k127_295730_0 Methionine synthase K00548 - 2.1.1.13 0.0 1745.0
YYD1_k127_295730_1 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007062 450.0
YYD1_k127_295730_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008776 248.0
YYD1_k127_295730_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000005672 228.0
YYD1_k127_295730_4 HlyD family secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000143 220.0
YYD1_k127_295730_5 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000001529 211.0
YYD1_k127_295730_6 HlyD membrane-fusion protein of T1SS - - - 0.000000000000000000000001369 118.0
YYD1_k127_295730_7 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.00000000000000003777 92.0
YYD1_k127_2964179_0 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004371 320.0
YYD1_k127_2964179_1 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000001474 149.0
YYD1_k127_2964179_2 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000001382 128.0
YYD1_k127_2969387_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 614.0
YYD1_k127_2969387_1 COG4772 Outer membrane receptor for Fe3 -dicitrate K16091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 624.0
YYD1_k127_2969387_10 PFAM Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007724 313.0
YYD1_k127_2969387_11 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005839 312.0
YYD1_k127_2969387_12 cellular manganese ion homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000001708 237.0
YYD1_k127_2969387_13 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000000000000007716 189.0
YYD1_k127_2969387_14 membrane - - - 0.000000000000000000000000000004547 125.0
YYD1_k127_2969387_15 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000001797 123.0
YYD1_k127_2969387_16 Protein of unknown function (DUF3347) - - - 0.000000000006881 74.0
YYD1_k127_2969387_17 - - - - 0.0000007894 59.0
YYD1_k127_2969387_2 Peptidase, M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004994 429.0
YYD1_k127_2969387_3 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008111 389.0
YYD1_k127_2969387_4 alcohol dehydrogenase K00008 - 1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003723 379.0
YYD1_k127_2969387_5 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003739 369.0
YYD1_k127_2969387_6 COG0477 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006955 367.0
YYD1_k127_2969387_7 PFAM Alcohol dehydrogenase, zinc-binding K00001 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008899 345.0
YYD1_k127_2969387_8 thiolester hydrolase activity K01179,K06889,K10773,K15853 - 3.2.1.4,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 332.0
YYD1_k127_2969387_9 Belongs to the amidase family K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 311.0
YYD1_k127_2970601_0 DNA topological change - - - 4.063e-254 813.0
YYD1_k127_2970601_1 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 582.0
YYD1_k127_2970601_2 MatE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 535.0
YYD1_k127_2970601_3 COG5285 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 416.0
YYD1_k127_2970601_4 helix_turn_helix, cAMP Regulatory protein K21564 - - 0.0000000000000000000000000000000001351 141.0
YYD1_k127_2970601_5 PFAM von Willebrand factor type A - - - 0.0000000000000000000000000000005183 134.0
YYD1_k127_2976115_0 Belongs to the IlvD Edd family K22396 - 4.2.1.82 1.695e-296 930.0
YYD1_k127_2976115_1 Domain of Unknown Function (DUF1259) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 381.0
YYD1_k127_2976115_2 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 344.0
YYD1_k127_2976115_3 fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000001011 156.0
YYD1_k127_2989901_0 Belongs to the aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005478 587.0
YYD1_k127_2989901_1 Aminotransferase class-V K01556 - 3.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005676 449.0
YYD1_k127_2989901_2 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006018 365.0
YYD1_k127_2989901_3 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004708 319.0
YYD1_k127_2989901_4 Enoyl-CoA hydratase K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000004506 225.0
YYD1_k127_2989901_5 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000002293 72.0
YYD1_k127_3001751_0 Zinc carboxypeptidase - - - 0.0 1298.0
YYD1_k127_3001751_1 AcrB/AcrD/AcrF family K03296 - - 0.0 1205.0
YYD1_k127_3001751_10 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.00000000000000000000000000000000000000000000000000000000000001297 229.0
YYD1_k127_3001751_11 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000002447 152.0
YYD1_k127_3001751_12 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000002295 139.0
YYD1_k127_3001751_13 Regulates arginine biosynthesis genes K03402 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.000000000000000000000002348 108.0
YYD1_k127_3001751_14 Catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate K00619 - 2.3.1.1 0.000000000000000000004513 104.0
YYD1_k127_3001751_15 phosphohistidine phosphatase, SixA K03574,K08296 - 3.6.1.55 0.0000000000000000005266 93.0
YYD1_k127_3001751_16 Protein conserved in bacteria - - - 0.000000000000002759 83.0
YYD1_k127_3001751_17 BON domain - - - 0.0000000000005813 80.0
YYD1_k127_3001751_18 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.000000000008764 70.0
YYD1_k127_3001751_19 OprF membrane domain K03286 - - 0.0001577 53.0
YYD1_k127_3001751_2 Pyridoxal-dependent decarboxylase conserved domain K01593,K01634 - 4.1.1.105,4.1.1.28,4.1.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 559.0
YYD1_k127_3001751_3 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 464.0
YYD1_k127_3001751_4 TIGRFAM argininosuccinate lyase K01755 - 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007278 416.0
YYD1_k127_3001751_5 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 343.0
YYD1_k127_3001751_6 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 347.0
YYD1_k127_3001751_7 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000007746 248.0
YYD1_k127_3001751_8 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000000000000000000000002869 233.0
YYD1_k127_3001751_9 Ribonuclease, BN K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000008646 243.0
YYD1_k127_3003225_0 AcrB/AcrD/AcrF family - - - 0.0 1114.0
YYD1_k127_3003225_1 COG0076 Glutamate decarboxylase and related PLP-dependent K01593 - 4.1.1.105,4.1.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009711 588.0
YYD1_k127_3003225_3 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004998 343.0
YYD1_k127_3003225_4 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000471 183.0
YYD1_k127_3003225_5 PFAM GlcNAc-PI de-N-acetylase K22135 - - 0.00000000000000000000000000002361 129.0
YYD1_k127_301651_0 DNA polymerase X family K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 525.0
YYD1_k127_301651_1 Mur ligase middle domain K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005834 455.0
YYD1_k127_301651_10 - - - - 0.000000000000000000001909 103.0
YYD1_k127_301651_11 Helix-turn-helix domain K15539 - - 0.0000000000000001002 90.0
YYD1_k127_301651_12 - - - - 0.000001789 57.0
YYD1_k127_301651_2 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 341.0
YYD1_k127_301651_3 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004193 291.0
YYD1_k127_301651_4 Type ii and iii secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002557 276.0
YYD1_k127_301651_5 Allophanate hydrolase subunit 2 K06350 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003034 256.0
YYD1_k127_301651_6 5-oxoprolinase (ATP-hydrolyzing) activity K01457,K06351,K07160 - 3.5.1.54 0.000000000000000000000000000000000000000000000000000000000007736 214.0
YYD1_k127_301651_7 LD-carboxypeptidase K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000000000000000000005523 213.0
YYD1_k127_301651_8 cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000007928 203.0
YYD1_k127_301651_9 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788,K10810 - 2.5.1.3,5.3.99.10 0.00000000000000000000000000004108 131.0
YYD1_k127_3042779_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 452.0
YYD1_k127_3042779_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000007188 246.0
YYD1_k127_3042779_2 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000002738 164.0
YYD1_k127_3042779_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000114 145.0
YYD1_k127_3042779_4 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 - 1.6.5.3 0.00000000000000000000000000000000007941 139.0
YYD1_k127_308070_0 Amidase K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 466.0
YYD1_k127_308070_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000003153 130.0
YYD1_k127_308070_2 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000228 123.0
YYD1_k127_308070_3 TOBE domain - - - 0.0000000000000000000000126 102.0
YYD1_k127_308070_4 Patatin-like phospholipase K07001 - - 0.00000003359 64.0
YYD1_k127_30844_0 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 2.326e-275 855.0
YYD1_k127_30844_1 ATP-dependent helicase K03579 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009266 568.0
YYD1_k127_30844_2 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 369.0
YYD1_k127_30844_3 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004095 273.0
YYD1_k127_30844_4 - - - - 0.000000000000000000000000000000000000002598 160.0
YYD1_k127_30844_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07025 - - 0.000000000000000000000000000000000000006851 154.0
YYD1_k127_30844_6 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000004156 70.0
YYD1_k127_30844_7 energy transducer activity K03832 - - 0.000002422 58.0
YYD1_k127_311514_0 Protein of unknown function (DUF2961) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 522.0
YYD1_k127_311514_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 501.0
YYD1_k127_311514_10 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009905 281.0
YYD1_k127_311514_11 Sulfatase - - - 0.00000000000000000000000000000000000000000000000612 183.0
YYD1_k127_311514_12 methyltransferase - - - 0.000000000000000000000000000000000000005197 154.0
YYD1_k127_311514_13 Xylose isomerase domain protein TIM barrel - - - 0.00000000000000000000000000000000000004468 154.0
YYD1_k127_311514_14 Predicted membrane protein (DUF2214) K08983 - - 0.0000000000000000000001261 102.0
YYD1_k127_311514_15 - - - - 0.000000000000005554 89.0
YYD1_k127_311514_16 - - - - 0.00000000187 67.0
YYD1_k127_311514_2 dehydrogenases and related proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 503.0
YYD1_k127_311514_3 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 494.0
YYD1_k127_311514_4 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 389.0
YYD1_k127_311514_5 Mediates zinc uptake. May also transport other divalent cations K07238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008836 355.0
YYD1_k127_311514_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 346.0
YYD1_k127_311514_7 inositol 2-dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005188 325.0
YYD1_k127_311514_8 PFAM glycoside hydrolase, family 10 K01181 - 3.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008673 314.0
YYD1_k127_311514_9 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005654 300.0
YYD1_k127_312594_0 AAA ATPase domain K12132 - 2.7.11.1 1.295e-197 658.0
YYD1_k127_312594_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 465.0
YYD1_k127_312594_2 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 462.0
YYD1_k127_312594_3 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.0000000000000000000000000000000000000000000000000000000000005286 222.0
YYD1_k127_312594_4 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000001165 173.0
YYD1_k127_312594_5 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000009469 191.0
YYD1_k127_312594_6 HD domain protein - - - 0.000000000000000000000000000000000000000000521 175.0
YYD1_k127_312594_7 protein kinase activity - - - 0.00000000000000000000000000000000005408 156.0
YYD1_k127_312594_8 YceI-like domain - - - 0.0000007176 53.0
YYD1_k127_313392_0 PQQ-like domain K00117 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 572.0
YYD1_k127_313392_1 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001744 252.0
YYD1_k127_313392_2 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000007687 246.0
YYD1_k127_313392_3 - - - - 0.000000000000000000000000000000000000000000000000000000007967 214.0
YYD1_k127_31572_0 iron-sulfur cluster assembly K07033,K09014 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0008150,GO:0008152,GO:0009536,GO:0009842,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0071840 - 1.103e-234 733.0
YYD1_k127_31572_1 acyl-CoA transferase carnitine dehydratase K18702 - 2.8.3.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 460.0
YYD1_k127_31572_11 Is able to transfer iron-sulfur clusters to apo- ferredoxin. Multiple cycles of 2Fe2S cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system K13628 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0009058,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0016530,GO:0018130,GO:0019438,GO:0019538,GO:0022607,GO:0031163,GO:0031974,GO:0033013,GO:0033014,GO:0034641,GO:0034986,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051540,GO:0051604,GO:0070013,GO:0071704,GO:0071840,GO:0097428,GO:0140104,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000003097 120.0
YYD1_k127_31572_12 COG0720 6-pyruvoyl-tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000001375 108.0
YYD1_k127_31572_13 Protein of unknown function (DUF541) K09807 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00000000000000000006078 102.0
YYD1_k127_31572_14 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins - - - 0.000006658 50.0
YYD1_k127_31572_15 COG2133 Glucose sorbosone dehydrogenases - - - 0.00009515 50.0
YYD1_k127_31572_2 PFAM multicopper oxidase type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 390.0
YYD1_k127_31572_3 DNA recombination protein RmuC K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 344.0
YYD1_k127_31572_4 Aminotransferase class-V K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 335.0
YYD1_k127_31572_5 transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004362 331.0
YYD1_k127_31572_6 homoserine dehydrogenase activity K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000004334 231.0
YYD1_k127_31572_7 iron dependent repressor K03709 - - 0.00000000000000000000000000000000000000000000000000000000006265 223.0
YYD1_k127_31572_8 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000002135 186.0
YYD1_k127_31572_9 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000009505 177.0
YYD1_k127_3181215_0 aromatic amino acid beta-eliminating lyase threonine aldolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 463.0
YYD1_k127_3181215_1 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007366 421.0
YYD1_k127_3181215_2 Belongs to the PdxA family K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.00000000000000000000000000000000000000000000000000000000000000000000000008924 258.0
YYD1_k127_3181215_3 PFAM PSP1 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000009722 219.0
YYD1_k127_3181215_4 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0070930,GO:0071704,GO:1901564 - 0.000000000000000000000000000000000000000000000000002605 188.0
YYD1_k127_3181215_5 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000005214 180.0
YYD1_k127_3181215_6 DNA polymerase III K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000002513 178.0
YYD1_k127_3181215_7 - - - - 0.0000000008038 67.0
YYD1_k127_3182824_0 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 396.0
YYD1_k127_3182824_1 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009229 351.0
YYD1_k127_3182824_2 Nucleoside-diphosphate-sugar epimerases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001105 262.0
YYD1_k127_3182824_3 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000005426 231.0
YYD1_k127_3182824_4 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000001342 189.0
YYD1_k127_3182824_5 Belongs to the pirin family K06911 - - 0.000601 43.0
YYD1_k127_3186038_0 serine-type peptidase activity - - - 4.085e-255 821.0
YYD1_k127_3186038_1 asparaginase K01424,K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.1,3.5.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008047 467.0
YYD1_k127_3186038_2 aminopeptidase activity K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 436.0
YYD1_k127_3186038_3 beta' subunit K01754 - 4.3.1.19 0.000000000000000000003507 100.0
YYD1_k127_3186166_0 PFAM Uncharacterised BCR, COG1649 - - - 4.049e-296 926.0
YYD1_k127_3186166_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 7.488e-215 676.0
YYD1_k127_3186166_2 Protein of unknown function (DUF4038) - - - 4.648e-205 655.0
YYD1_k127_3186166_3 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 397.0
YYD1_k127_3186166_4 Polyphosphate kinase 2 (PPK2) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 354.0
YYD1_k127_3186166_5 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 344.0
YYD1_k127_3186166_6 Domain of Unknown Function (DUF1080) - - - 0.0000000000003016 71.0
YYD1_k127_3186166_7 - - - - 0.0000003344 55.0
YYD1_k127_3197243_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 459.0
YYD1_k127_3197243_1 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 443.0
YYD1_k127_3197243_2 protocatechuate 3,4-dioxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 458.0
YYD1_k127_3197243_3 Methane oxygenase PmoA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008623 314.0
YYD1_k127_3197243_4 purine nucleotide biosynthetic process K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004705 274.0
YYD1_k127_3197243_5 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000365 145.0
YYD1_k127_3197243_6 DoxX K16937 - 1.8.5.2 0.0000000000000000000000000001842 121.0
YYD1_k127_3197243_7 COG2755 Lysophospholipase L1 and related esterases - - - 0.000000000000003235 87.0
YYD1_k127_3197243_8 TIGRFAM MoaD family protein K03636 - - 0.000000001584 62.0
YYD1_k127_3197645_0 Domain of unknown function (DUF362) - - - 6.758e-221 691.0
YYD1_k127_3197645_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 4.07e-219 698.0
YYD1_k127_3197645_2 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 316.0
YYD1_k127_3197645_3 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000000000000000000000003709 134.0
YYD1_k127_3205471_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 602.0
YYD1_k127_3205471_1 PFAM deoxyribose-phosphate aldolase phospho-2-dehydro-3-deoxyheptonate aldolase K01635 - 4.1.2.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009945 492.0
YYD1_k127_3205471_10 peptide deformylase activity K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.000000000000000000000000000000000000000000000000116 186.0
YYD1_k127_3205471_11 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000001057 190.0
YYD1_k127_3205471_12 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000003046 181.0
YYD1_k127_3205471_13 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000002148 160.0
YYD1_k127_3205471_14 - - - - 0.00000000000000000000000000000000000006198 153.0
YYD1_k127_3205471_15 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000001359 153.0
YYD1_k127_3205471_16 Belongs to the GcvT family K06980 - - 0.000000000000000000000000000001172 126.0
YYD1_k127_3205471_17 nUDIX hydrolase K03574,K03575 - 3.6.1.55 0.000000000000000000000000001787 117.0
YYD1_k127_3205471_18 PFAM thioesterase superfamily protein K07107 - - 0.000000000000000000000000003823 118.0
YYD1_k127_3205471_19 Receptor - - - 0.0000004132 62.0
YYD1_k127_3205471_2 Permease family K06901 GO:0003674,GO:0005215,GO:0005345,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006863,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015205,GO:0015207,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0015851,GO:0015853,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:0098655,GO:0098660,GO:0098662,GO:1902600,GO:1904823 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 497.0
YYD1_k127_3205471_20 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.000001204 51.0
YYD1_k127_3205471_3 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 395.0
YYD1_k127_3205471_4 FES K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003164 279.0
YYD1_k127_3205471_5 Patched family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001785 275.0
YYD1_k127_3205471_6 Squalene/phytoene synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002583 261.0
YYD1_k127_3205471_7 Squalene phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000001271 222.0
YYD1_k127_3205471_8 squalene-associated FAD-dependent desaturase - - - 0.0000000000000000000000000000000000000000000000000000000001733 220.0
YYD1_k127_3205471_9 GDP-mannose mannosyl hydrolase activity K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000002125 192.0
YYD1_k127_3219885_0 oligopeptide transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004893 532.0
YYD1_k127_3219885_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 381.0
YYD1_k127_3219885_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002032 244.0
YYD1_k127_3219885_3 Thioredoxin K03672 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000001732 203.0
YYD1_k127_3219885_4 Peptidase M56 - - - 0.0000000000000000000000000000533 119.0
YYD1_k127_3219885_5 Protein of unknown function, DUF255 K01829 - 5.3.4.1 0.00000000006235 70.0
YYD1_k127_3233898_0 Glycosyl hydrolase-like 10 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 328.0
YYD1_k127_3233898_1 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001187 289.0
YYD1_k127_3233898_2 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001232 278.0
YYD1_k127_3233898_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001999 259.0
YYD1_k127_3233898_4 Glycine cleavage H-protein - - - 0.0000000000000000000000000000000000000000000000000000000000573 213.0
YYD1_k127_3233898_5 PFAM Polysulphide reductase, NrfD - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000003236 194.0
YYD1_k127_3233898_6 Glycine cleavage H-protein - - - 0.0000000000000000000000000001845 124.0
YYD1_k127_3233898_7 Peptidase_C39 like family - - - 0.0000004385 63.0
YYD1_k127_3245174_0 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007318 292.0
YYD1_k127_3245174_1 WYL domain - - - 0.00000000000000000000000000000000000000000000002384 183.0
YYD1_k127_3245174_2 PFAM HNH endonuclease - - - 0.000000000000000000000000000000009536 133.0
YYD1_k127_3245174_3 protein homotetramerization - - - 0.00000000000000000000000000000003461 134.0
YYD1_k127_3248539_0 cellulose binding - - - 0.0 1212.0
YYD1_k127_3248539_1 MutS domain I K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 7.507e-238 759.0
YYD1_k127_3248539_10 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000002358 84.0
YYD1_k127_3248539_12 - - - - 0.00000000007233 63.0
YYD1_k127_3248539_13 Anaphase-promoting complex, cyclosome, subunit 3 - - - 0.0000005364 61.0
YYD1_k127_3248539_2 PFAM WD40 domain protein beta Propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 386.0
YYD1_k127_3248539_3 Deoxyhypusine synthase K00809 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008612,GO:0009058,GO:0009987,GO:0010467,GO:0016740,GO:0016765,GO:0018193,GO:0018205,GO:0019538,GO:0034038,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005883 351.0
YYD1_k127_3248539_4 Arginase family K01480 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000857 265.0
YYD1_k127_3248539_5 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002062 279.0
YYD1_k127_3248539_6 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000009774 211.0
YYD1_k127_3248539_7 Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin K00365 - 1.7.3.3 0.000000000000000000000000000000000003506 149.0
YYD1_k127_3248539_8 Glycoprotease family K01409,K14742 - 2.3.1.234 0.00000000000000000000000001111 122.0
YYD1_k127_3248539_9 This protein is involved in the repair of mismatches in DNA K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000189 89.0
YYD1_k127_3256762_0 Belongs to the argininosuccinate synthase family. Type 2 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 4.948e-246 764.0
YYD1_k127_3256762_1 proline dipeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 590.0
YYD1_k127_3256762_2 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 559.0
YYD1_k127_3256762_3 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003685 424.0
YYD1_k127_3256762_4 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 378.0
YYD1_k127_3256762_5 Cytochrome c3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008101 326.0
YYD1_k127_3256762_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000297 281.0
YYD1_k127_3256762_7 Tryptophan halogenase K21401 - 1.3.99.38 0.000000000000000000000000000000000000000000000000000000000000000000000009751 258.0
YYD1_k127_3256762_8 Belongs to the glycosyl hydrolase 43 family - - - 0.00000000000001114 75.0
YYD1_k127_3256762_9 SMART peptidase S1 and S6 chymotrypsin Hap - - - 0.0000000000001214 81.0
YYD1_k127_3273057_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 5.003e-259 808.0
YYD1_k127_3273057_1 Histidine ammonia-lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000775 481.0
YYD1_k127_3273057_2 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000006427 202.0
YYD1_k127_3273057_3 Amidohydrolase family - - - 0.000000000000000000000000004425 112.0
YYD1_k127_3273057_4 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.00000000000000000000000003385 108.0
YYD1_k127_3273057_5 AAA ATPase domain - - - 0.000000000007781 77.0
YYD1_k127_3277489_0 AAA ATPase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 554.0
YYD1_k127_3277489_1 uridine kinase K00876 - 2.7.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 431.0
YYD1_k127_3277489_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000006958 225.0
YYD1_k127_3277489_3 Carbohydrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000001375 228.0
YYD1_k127_3277489_4 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000000000000000000008021 151.0
YYD1_k127_3277489_5 Winged helix DNA-binding domain K09927 - - 0.0000000000000000000000000000000000001133 143.0
YYD1_k127_3284615_0 Dehydrogenase E1 component K11381 - 1.2.4.4 9.162e-273 856.0
YYD1_k127_3284615_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004437 422.0
YYD1_k127_3284615_10 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth - - - 0.00004314 50.0
YYD1_k127_3284615_2 heat shock protein binding K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 327.0
YYD1_k127_3284615_3 Anion-transporting ATPase K01551 - 3.6.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000119 286.0
YYD1_k127_3284615_4 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000004648 213.0
YYD1_k127_3284615_5 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000001576 197.0
YYD1_k127_3284615_6 PFAM Cupin 2, conserved barrel - - - 0.000000000000000000000000000000000002666 141.0
YYD1_k127_3284615_7 Gas vesicle protein K - - - 0.000000000000000000000119 106.0
YYD1_k127_3284615_8 Gas vesicle - - - 0.0000000000000000385 92.0
YYD1_k127_3284615_9 Gas vesicle synthesis protein GvpL/GvpF - - - 0.00000002436 65.0
YYD1_k127_3286740_0 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003308 470.0
YYD1_k127_3286740_1 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006225 432.0
YYD1_k127_3286740_2 Putative serine dehydratase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005995 303.0
YYD1_k127_3286740_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000001373 139.0
YYD1_k127_3286740_4 BMC - - - 0.000000000000000000000000000001541 125.0
YYD1_k127_3286740_5 WHG domain - - - 0.0000000000000000000000001736 114.0
YYD1_k127_3286740_6 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000001198 92.0
YYD1_k127_3286740_7 helix_turn_helix, mercury resistance - - - 0.00000000000000005932 87.0
YYD1_k127_3286740_8 Cytochrome c554 and c-prime - - - 0.00001174 56.0
YYD1_k127_330996_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008204 484.0
YYD1_k127_330996_1 COG0534 Na -driven multidrug efflux pump K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 458.0
YYD1_k127_330996_2 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000001764 246.0
YYD1_k127_330996_3 Tfp pilus assembly protein FimV - - - 0.000003958 59.0
YYD1_k127_3344626_0 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005075 404.0
YYD1_k127_3344626_1 ThiS family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005028 380.0
YYD1_k127_3344626_2 geranylgeranyl reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 393.0
YYD1_k127_3384717_0 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 481.0
YYD1_k127_3384717_1 Belongs to the peptidase S8 family K17734 - - 0.0000000000000000000000000000000000000000000000000000000000000000003836 251.0
YYD1_k127_3384717_2 response regulator receiver K07714,K10943 - - 0.0000000000000000000000000000000000000000000000000000000000000000006914 236.0
YYD1_k127_345937_0 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K11779,K11784,K18285 - 1.21.98.1,2.5.1.120,2.5.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004221 452.0
YYD1_k127_345937_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005437 445.0
YYD1_k127_345937_2 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 413.0
YYD1_k127_345937_3 MoeA N-terminal region (domain I and II) K03750,K07219 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006629 411.0
YYD1_k127_345937_4 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004125 326.0
YYD1_k127_345937_5 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.0000000000000000000000000000000000000000000002623 186.0
YYD1_k127_345937_6 Domain of unknown function (DUF5107) - - - 0.000000000000000000000000000000000000000000004722 166.0
YYD1_k127_345937_7 Redoxin - - - 0.000000000000001497 80.0
YYD1_k127_345937_8 Uncharacterised protein family UPF0047 - - - 0.000000000000004291 76.0
YYD1_k127_345937_9 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0001422 45.0
YYD1_k127_3471200_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 354.0
YYD1_k127_3471200_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000191 256.0
YYD1_k127_3471200_2 PFAM von Willebrand factor type A - - - 0.000000000000000000000000000000000003732 153.0
YYD1_k127_3471200_3 Cytochrome c assembly protein - - - 0.00000000000000000000000000000000003738 149.0
YYD1_k127_3480400_0 Cytochrome c554 and c-prime - - - 4.387e-220 707.0
YYD1_k127_3480400_1 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 548.0
YYD1_k127_3480400_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000001503 214.0
YYD1_k127_3480400_3 Glycosyl transferase family group 2 K07011 - - 0.00000000000000000000000000000000000000000003116 174.0
YYD1_k127_3480400_4 Tetratricopeptide repeat - - - 0.0000000002695 72.0
YYD1_k127_3483085_0 transport - - - 5.496e-310 987.0
YYD1_k127_3483085_1 Alpha-L-fucosidase K01206 - 3.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 610.0
YYD1_k127_3483085_2 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K18334 - 4.2.1.68 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 612.0
YYD1_k127_3483085_3 ABC transporter K10441 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005929 545.0
YYD1_k127_3483085_4 Periplasmic binding protein LacI transcriptional regulator K10439 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 342.0
YYD1_k127_3483085_5 amidohydrolase K07046 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 327.0
YYD1_k127_3483085_6 Belongs to the binding-protein-dependent transport system permease family K10440,K17203 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006313 323.0
YYD1_k127_3483085_7 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000004386 254.0
YYD1_k127_3483085_8 L-rhamnose mutarotase K03534 - 5.1.3.32 0.000000000000000000000005223 105.0
YYD1_k127_3483085_9 23S rRNA-intervening sequence protein - - - 0.0000000000000004617 83.0
YYD1_k127_3490781_0 glycoside hydrolase family 2 sugar binding - - - 1.571e-313 995.0
YYD1_k127_3490781_1 Carboxypeptidase regulatory-like domain - - - 3.638e-199 655.0
YYD1_k127_3490781_2 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003408 580.0
YYD1_k127_3490781_3 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005633 539.0
YYD1_k127_3490781_4 Methyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008214 338.0
YYD1_k127_3490781_5 ATPases associated with a variety of cellular activities K05847 GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0031460,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0072337 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 317.0
YYD1_k127_3490781_6 Beta-galactosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004535 289.0
YYD1_k127_3490781_7 DinB family - - - 0.00000000000000000000000000000000000000000004217 166.0
YYD1_k127_3490781_8 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.0000000000000000000000000000000000000488 147.0
YYD1_k127_3491822_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K00256 - 1.3.99.16 5.978e-220 709.0
YYD1_k127_3491822_1 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006817 621.0
YYD1_k127_3491822_10 SWIB/MDM2 domain K03169 - 5.99.1.2 0.000000000000000000000000000001894 125.0
YYD1_k127_3491822_11 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000002566 107.0
YYD1_k127_3491822_2 Protein of unknown function (DUF3500) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 450.0
YYD1_k127_3491822_3 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 439.0
YYD1_k127_3491822_4 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 323.0
YYD1_k127_3491822_5 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 304.0
YYD1_k127_3491822_6 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000000000000006228 211.0
YYD1_k127_3491822_7 [2Fe-2S] binding domain - - - 0.00000000000000000000000000000000000000000000000000001195 192.0
YYD1_k127_3491822_8 - - - - 0.00000000000000000000000000000000000000000000000284 180.0
YYD1_k127_3491822_9 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000172 139.0
YYD1_k127_349323_0 serine-type peptidase activity K01278 - 3.4.14.5 7.827e-285 898.0
YYD1_k127_349323_1 PQQ enzyme repeat K00117 - 1.1.5.2 2.191e-278 871.0
YYD1_k127_349323_10 YceI-like domain - - - 0.000000000000000000000000000000000000000000000000000000001613 205.0
YYD1_k127_349323_11 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000005553 142.0
YYD1_k127_349323_12 Domain of unknown function (DUF386) - - - 0.00000000000000000000000000000006776 130.0
YYD1_k127_349323_13 DNA-binding transcription factor activity K03892 - - 0.0000000000000000000000000001238 127.0
YYD1_k127_349323_14 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000003202 111.0
YYD1_k127_349323_15 negative regulation of transcription, DNA-templated - - - 0.0000000000000002858 93.0
YYD1_k127_349323_2 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 596.0
YYD1_k127_349323_3 transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 552.0
YYD1_k127_349323_4 PFAM Peptidase M19, renal dipeptidase K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 499.0
YYD1_k127_349323_5 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 465.0
YYD1_k127_349323_6 gluconate transporter K03299 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 387.0
YYD1_k127_349323_7 Abhydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 379.0
YYD1_k127_349323_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004541 375.0
YYD1_k127_349323_9 PFAM Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007077 330.0
YYD1_k127_3493584_0 Glutamate synthase K00265,K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 0.0 1347.0
YYD1_k127_3493584_1 Flavin containing amine oxidoreductase K00266 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.4.1.13,1.4.1.14 2.017e-227 712.0
YYD1_k127_3493584_2 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 1.18e-201 640.0
YYD1_k127_3493584_3 Ammonium Transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 580.0
YYD1_k127_3493584_4 Protein of unknown function (DUF3014) - - - 0.0000000000000000000000000000000000000000000000002171 186.0
YYD1_k127_3493584_5 - - - - 0.000000000000000000000243 108.0
YYD1_k127_3507280_0 Multi-copper - - - 1.212e-275 860.0
YYD1_k127_3507280_1 outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 330.0
YYD1_k127_3507280_2 copper resistance K07233 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 302.0
YYD1_k127_3507280_3 Polyphosphate kinase middle domain K00937 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000008689 248.0
YYD1_k127_3507280_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000009296 70.0
YYD1_k127_3507280_5 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0003491 52.0
YYD1_k127_3515365_0 PhoD-like phosphatase - - - 5.863e-231 737.0
YYD1_k127_3515365_1 SMART Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 355.0
YYD1_k127_3515365_2 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006315 315.0
YYD1_k127_3515365_3 PFAM peptidase M48 Ste24p - - - 0.00000000000000000000000000000000003915 149.0
YYD1_k127_3516320_0 ABC transporter K06020 - 3.6.3.25 1.576e-264 824.0
YYD1_k127_3516320_1 protein secretion by the type I secretion system K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006787 436.0
YYD1_k127_3516320_2 TRAP transporter solute receptor, TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004043 286.0
YYD1_k127_3532876_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007219 581.0
YYD1_k127_3532876_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 444.0
YYD1_k127_3532876_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000005863 271.0
YYD1_k127_3532876_3 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000001737 276.0
YYD1_k127_3532876_4 YceG-like family K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004158 264.0
YYD1_k127_3532876_5 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000007797 216.0
YYD1_k127_3532876_6 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000003561 217.0
YYD1_k127_3532876_7 Peptidase M23 - - - 0.0000000000000000000000000000819 130.0
YYD1_k127_3532876_8 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.0000000000000000007644 92.0
YYD1_k127_3539700_0 Aminotransferase class-III K00823 - 2.6.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 516.0
YYD1_k127_3539700_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 443.0
YYD1_k127_3539700_2 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000001511 101.0
YYD1_k127_3539700_3 Methyltransferase domain - - - 0.00000000000000002815 83.0
YYD1_k127_3539700_5 - - - - 0.00007814 47.0
YYD1_k127_3551932_0 dehydrogenases and related proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 410.0
YYD1_k127_3551932_1 Amidohydrolase family K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004445 283.0
YYD1_k127_3551932_2 Cyclase dehydrase - - - 0.00000000000000000000000000000000000000000000000000000000000002177 226.0
YYD1_k127_3551932_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000000000000000000000000000000000000000000000000000000003369 216.0
YYD1_k127_3551932_4 Trehalose utilisation K09992 - - 0.0000000000000000000000000000000000000000000000000002299 194.0
YYD1_k127_3551932_5 Export-related chaperone CsaA K06878 - - 0.00000000000000000000000000000000000000003382 154.0
YYD1_k127_3551932_6 Magnesium transport protein CorA K03284 - - 0.00000000000000001931 83.0
YYD1_k127_3576902_0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 450.0
YYD1_k127_3576902_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005365 462.0
YYD1_k127_3576902_2 - K00262 - 1.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 425.0
YYD1_k127_3576902_3 Fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007752 417.0
YYD1_k127_3576902_4 PFAM Peptidase M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001115 263.0
YYD1_k127_3576902_5 C-terminal binding-module, SLH-like, of glucodextranase - - - 0.00000000000000000000003824 113.0
YYD1_k127_3576902_6 TonB dependent receptor - - - 0.0006339 51.0
YYD1_k127_3585926_0 Cytochrome c - - - 0.0 1014.0
YYD1_k127_3585926_1 CHAT domain - - - 3.646e-236 783.0
YYD1_k127_3585926_10 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000006367 235.0
YYD1_k127_3585926_11 - - - - 0.00000000000000000000000000000000000000000000000000000006941 202.0
YYD1_k127_3585926_12 serine threonine protein kinase K03587,K08884,K12132 - 2.7.11.1,3.4.16.4 0.00000000000000000000000000000000000000000000004372 185.0
YYD1_k127_3585926_13 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000157 136.0
YYD1_k127_3585926_14 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000004709 121.0
YYD1_k127_3585926_15 PFAM beta-lactamase domain protein - - - 0.00000000000000000000005515 114.0
YYD1_k127_3585926_18 TIR domain - - - 0.000000000000000000002651 109.0
YYD1_k127_3585926_19 PFAM BioY protein K03523 - - 0.0000000000000000002906 101.0
YYD1_k127_3585926_2 Animal haem peroxidase - - - 3.749e-217 689.0
YYD1_k127_3585926_21 Cold shock protein domain - - - 0.000000000000001003 80.0
YYD1_k127_3585926_22 - - - - 0.00000000000001933 87.0
YYD1_k127_3585926_23 - K04517 - 1.3.1.12 0.00000000006466 69.0
YYD1_k127_3585926_24 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.00000002977 59.0
YYD1_k127_3585926_25 Tetratricopeptide repeat - - - 0.0009923 43.0
YYD1_k127_3585926_3 extracellular matrix structural constituent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 583.0
YYD1_k127_3585926_4 PQQ-like domain K00114 - 1.1.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003583 557.0
YYD1_k127_3585926_5 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 524.0
YYD1_k127_3585926_6 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 390.0
YYD1_k127_3585926_7 Caspase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 327.0
YYD1_k127_3585926_8 arylsulfatase A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002385 256.0
YYD1_k127_3585926_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001799 234.0
YYD1_k127_3587456_0 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 523.0
YYD1_k127_3587456_1 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008682 328.0
YYD1_k127_3587456_2 Cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 294.0
YYD1_k127_3587456_3 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000001178 223.0
YYD1_k127_3587456_4 - - - - 0.00000000000000000000000005901 112.0
YYD1_k127_3587456_5 acetyltransferase - - - 0.00000000000000000000006955 104.0
YYD1_k127_3602495_0 Por secretion system C-terminal sorting domain-containing protein - - - 2.257e-276 866.0
YYD1_k127_3602495_1 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 527.0
YYD1_k127_3645423_0 Sortilin, neurotensin receptor 3, - - - 1.452e-254 812.0
YYD1_k127_3645423_1 Predicted membrane protein (DUF2339) - - - 1.598e-242 794.0
YYD1_k127_3645423_2 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000361 281.0
YYD1_k127_3645423_3 Phosphoribulokinase / Uridine kinase family K00855,K00876 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.19,2.7.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000001492 252.0
YYD1_k127_3645423_4 dUTP diphosphatase activity K01520,K13038 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0051259,GO:0051260,GO:0055086,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23,4.1.1.36,6.3.2.5 0.00000000000000000000000000000000224 138.0
YYD1_k127_3645423_5 Zn-dependent dipeptidase, microsomal dipeptidase K01273,K01274 - 3.4.13.19 0.0000000000000000000000000000009527 121.0
YYD1_k127_3645423_6 Catalyzes the cleavage of the N-glycosidic bond of deoxyribonucleoside 5'-monophosphates to yield deoxyribose 5- phosphate and a purine or pyrimidine base. Deoxyribonucleoside 5'- monophosphates containing purine bases are preferred to those containing pyrimidine bases - GO:0001558,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009123,GO:0009125,GO:0009159,GO:0009162,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0030307,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040008,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0045927,GO:0046434,GO:0046483,GO:0046700,GO:0046983,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0055086,GO:0065007,GO:0070694,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 - 0.0000000000004374 74.0
YYD1_k127_3645423_7 - - - - 0.00002828 54.0
YYD1_k127_3707704_0 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 348.0
YYD1_k127_3707704_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005841 287.0
YYD1_k127_3707704_2 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002582 275.0
YYD1_k127_3707704_3 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000001121 225.0
YYD1_k127_3707704_4 carboxylic acid catabolic process - - - 0.00000000000000000000000000000000000000000000523 174.0
YYD1_k127_3707704_5 PFAM Histidine triad (HIT) protein K02503 - - 0.00000000000000000000000000000000000000000004469 164.0
YYD1_k127_3707704_6 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.000000000000000000000000000000000000000004123 170.0
YYD1_k127_3707704_7 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000005079 96.0
YYD1_k127_3707704_8 Ubiquitin-specific protease. Source PGD - - - 0.00000000001637 73.0
YYD1_k127_371338_0 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 555.0
YYD1_k127_371338_1 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 411.0
YYD1_k127_371338_10 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000008894 201.0
YYD1_k127_371338_11 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000001005 148.0
YYD1_k127_371338_2 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 349.0
YYD1_k127_371338_3 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 337.0
YYD1_k127_371338_4 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 291.0
YYD1_k127_371338_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006202 294.0
YYD1_k127_371338_6 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000001047 266.0
YYD1_k127_371338_7 - K06921 - - 0.0000000000000000000000000000000000000000000000000000000000000000002442 243.0
YYD1_k127_371338_8 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000002106 231.0
YYD1_k127_371338_9 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000001787 210.0
YYD1_k127_3720179_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 432.0
YYD1_k127_3720179_1 amino acid K03294,K13868 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 397.0
YYD1_k127_3720179_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 325.0
YYD1_k127_3720179_3 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000444 321.0
YYD1_k127_3720179_4 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000001799 260.0
YYD1_k127_3720179_5 Zinc carboxypeptidase - - - 0.0000621 48.0
YYD1_k127_3740543_0 Peptidase family M28 - - - 6.126e-222 701.0
YYD1_k127_3740543_1 Imidazolonepropionase and related - - - 3.439e-210 684.0
YYD1_k127_3740543_10 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000125 167.0
YYD1_k127_3740543_11 NUDIX domain - - - 0.0000000000000000000000000000000000000004805 158.0
YYD1_k127_3740543_12 PAP2 superfamily - - - 0.0000000000000000000000003967 115.0
YYD1_k127_3740543_2 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01585 - 4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 493.0
YYD1_k127_3740543_3 C-terminal domain of 1-Cys peroxiredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008434 404.0
YYD1_k127_3740543_4 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005773 350.0
YYD1_k127_3740543_5 Alpha-L-fucosidase K01206 - 3.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000007653 252.0
YYD1_k127_3740543_6 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000001618 194.0
YYD1_k127_3740543_7 translation initiation factor activity K06996 - - 0.0000000000000000000000000000000000000000000008491 171.0
YYD1_k127_3740543_8 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000000000002413 171.0
YYD1_k127_3740543_9 HAD-hyrolase-like K01091 - 3.1.3.18 0.00000000000000000000000000000000000000001006 166.0
YYD1_k127_3756780_0 Carboxypeptidase regulatory-like domain - - - 0.0 1045.0
YYD1_k127_3756780_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 1.287e-246 769.0
YYD1_k127_3756780_2 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001263 288.0
YYD1_k127_3756780_3 methyltransferase activity - - - 0.0000000000000000000000000000000000186 145.0
YYD1_k127_3756780_4 SnoaL-like polyketide cyclase - - - 0.000000000000000000000003443 109.0
YYD1_k127_3756780_6 Patatin-like phospholipase K07001 - - 0.00001127 55.0
YYD1_k127_3767782_0 TonB-dependent Receptor Plug Domain - - - 1.508e-271 871.0
YYD1_k127_3767782_1 MacB-like periplasmic core domain - - - 2.116e-256 813.0
YYD1_k127_3767782_2 Sugar (and other) transporter - - - 1.171e-197 625.0
YYD1_k127_3767782_3 Iron-containing alcohol dehydrogenase K00001,K13954 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009251 369.0
YYD1_k127_3767782_4 glycerophosphoryl diester phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 311.0
YYD1_k127_3767782_5 - - - - 0.0000000000007249 77.0
YYD1_k127_3784373_0 ribonuclease inhibitor activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009297 464.0
YYD1_k127_3784373_1 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001036 267.0
YYD1_k127_3784373_2 PFAM Glycosyl hydrolase family 10 K01181 - 3.2.1.8 0.000000000000000000000000000000000000000003728 158.0
YYD1_k127_3784373_3 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.00000000000000000000000000000000005807 136.0
YYD1_k127_3829187_0 Tetratricopeptide repeats K08282,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 436.0
YYD1_k127_3829187_1 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000046 199.0
YYD1_k127_3829187_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000008902 190.0
YYD1_k127_3829187_3 Opacity protein - - - 0.00000000000000000423 93.0
YYD1_k127_3831146_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.46e-288 924.0
YYD1_k127_3831146_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001377 254.0
YYD1_k127_3831146_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.00000000000000000000000000000000004438 137.0
YYD1_k127_3831146_3 Transcription termination factor nusG - - - 0.0000000000000000000000000000000009795 136.0
YYD1_k127_3831146_4 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.0000000000000000000000000000001469 137.0
YYD1_k127_3834435_0 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003236 569.0
YYD1_k127_3834435_1 Alpha-L-fucosidase K01206 - 3.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 516.0
YYD1_k127_3834435_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 415.0
YYD1_k127_3834435_3 Xylose isomerase-like TIM barrel K03079 - 5.1.3.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008513 308.0
YYD1_k127_3834435_4 - - - - 0.0000000000000000000000000000000000000000000000003363 191.0
YYD1_k127_3834435_5 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000004155 145.0
YYD1_k127_3834435_6 DoxX - - - 0.00000000000000000000000000000002111 130.0
YYD1_k127_3834435_7 Surface antigen - - - 0.00000006332 63.0
YYD1_k127_3843756_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 503.0
YYD1_k127_3843756_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0030554,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009827 368.0
YYD1_k127_3843756_2 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 363.0
YYD1_k127_3843756_3 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 347.0
YYD1_k127_3843756_4 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003867 312.0
YYD1_k127_3843756_5 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000149 224.0
YYD1_k127_3843756_6 Essential cell division protein K01921,K03589,K06438 GO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0031224,GO:0031226,GO:0032153,GO:0032505,GO:0032506,GO:0040007,GO:0042802,GO:0043093,GO:0044085,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0071944,GO:0090529,GO:1902410,GO:1903047 6.3.2.4 0.0000000000002157 81.0
YYD1_k127_3856070_0 transport - - - 1.105e-290 937.0
YYD1_k127_3856070_1 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 471.0
YYD1_k127_3856070_2 chaperone-mediated protein folding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 396.0
YYD1_k127_3856070_3 ParB-like nuclease domain K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 332.0
YYD1_k127_3856070_4 amino acid - - - 0.000000000000000000000000000000000000000000000000006016 186.0
YYD1_k127_3856070_5 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000001297 180.0
YYD1_k127_3856070_6 Belongs to the UPF0337 (CsbD) family - - - 0.0003039 45.0
YYD1_k127_3857060_0 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 466.0
YYD1_k127_3857060_1 3-demethylubiquinone-9 3-O-methyltransferase activity K06219 - - 0.0000000000000000000000005465 113.0
YYD1_k127_3857060_2 Protein of unknown function (DUF3108) - - - 0.00000000000009248 80.0
YYD1_k127_3857060_3 PFAM O-antigen polymerase K18814 - - 0.00000008381 63.0
YYD1_k127_3857998_0 alpha/beta hydrolase fold K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 437.0
YYD1_k127_3857998_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 359.0
YYD1_k127_3857998_2 Fatty acid desaturase K00496 - 1.14.15.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 316.0
YYD1_k127_3857998_3 endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000139 141.0
YYD1_k127_3857998_4 secondary active sulfate transmembrane transporter activity - - - 0.0000000000000000000000000000009993 129.0
YYD1_k127_3857998_5 - - - - 0.000000000000000000009509 93.0
YYD1_k127_3857998_6 Thioesterase superfamily - - - 0.000408 43.0
YYD1_k127_3884264_0 4Fe-4S dicluster domain K00184 - - 0.0 1030.0
YYD1_k127_3884264_1 aerobic electron transport chain K00425,K08738 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000976 560.0
YYD1_k127_3884264_2 ATPase activity K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009311 359.0
YYD1_k127_3884264_3 Cytochrome c7 and related cytochrome c K19405,K19411 GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170 2.7.14.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007178 288.0
YYD1_k127_3884264_4 transmembrane transport K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000722 291.0
YYD1_k127_3884264_5 amidohydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000491 258.0
YYD1_k127_3884264_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000007682 183.0
YYD1_k127_3907062_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 403.0
YYD1_k127_3907062_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001643 277.0
YYD1_k127_3907062_10 Protein of unknown function (DUF1569) - - - 0.000000000000000000000000000000000000414 144.0
YYD1_k127_3907062_11 PAS fold - - - 0.0000000000000000000000000008894 125.0
YYD1_k127_3907062_12 YjbR - - - 0.000000000000000000000001134 111.0
YYD1_k127_3907062_13 Lysin motif - - - 0.00000000000000000003254 96.0
YYD1_k127_3907062_14 Domain of unknown function (DUF378) - - - 0.0000000000000002168 81.0
YYD1_k127_3907062_15 snoRNA binding - - - 0.00004552 50.0
YYD1_k127_3907062_2 cAMP biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005691 301.0
YYD1_k127_3907062_3 Domain of unknown function (DUF3471) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001072 250.0
YYD1_k127_3907062_4 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000005263 230.0
YYD1_k127_3907062_5 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000008315 218.0
YYD1_k127_3907062_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07710 - 2.7.13.3 0.0000000000000000000000000000000000000000000009742 179.0
YYD1_k127_3907062_7 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000001342 168.0
YYD1_k127_3907062_8 Lipocalin-like domain K03098 - - 0.0000000000000000000000000000000000000000001615 169.0
YYD1_k127_3910697_0 PFAM Permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002674 582.0
YYD1_k127_3910697_1 PFAM amidohydrolase K01464 - 3.5.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 546.0
YYD1_k127_3910697_2 Dynamin family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 539.0
YYD1_k127_3910697_3 Belongs to the aldehyde dehydrogenase family K22187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007675 505.0
YYD1_k127_3910697_4 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005638 375.0
YYD1_k127_3910697_5 fatty acid desaturase - - - 0.00000000000001166 85.0
YYD1_k127_3910697_6 EamA-like transporter family - - - 0.00001903 49.0
YYD1_k127_3932070_0 alpha-L-fucosidase K15923 - 3.2.1.51 5.097e-203 646.0
YYD1_k127_3932070_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007725 478.0
YYD1_k127_3932070_2 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000003512 252.0
YYD1_k127_3932070_3 Stage II sporulation protein - - - 0.0000000000000000000000000000000003257 151.0
YYD1_k127_3950361_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 319.0
YYD1_k127_3950361_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000004125 259.0
YYD1_k127_3950361_2 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000003275 179.0
YYD1_k127_3950361_3 Predicted membrane protein (DUF2157) - - - 0.000000000000000000000000000000000636 141.0
YYD1_k127_396978_0 peptidyl-tyrosine sulfation K01277 - 3.4.14.4 9.512e-293 924.0
YYD1_k127_396978_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000005036 278.0
YYD1_k127_396978_2 Beta-lactamase K01256,K17836 - 3.4.11.2,3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000001405 244.0
YYD1_k127_396978_3 Beta-Casp domain K07576 - - 0.0000000000000000000000000000000000000000000000000000000000007001 218.0
YYD1_k127_396978_4 major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000005321 211.0
YYD1_k127_396978_5 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000002757 170.0
YYD1_k127_396978_7 Predicted membrane protein (DUF2157) - - - 0.0000000000000000009839 99.0
YYD1_k127_396978_8 GDYXXLXY protein - - - 0.00000000000000003797 91.0
YYD1_k127_396978_9 TonB-dependent receptor - - - 0.0000003468 55.0
YYD1_k127_3978721_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007455 379.0
YYD1_k127_3978721_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000016 260.0
YYD1_k127_3978721_2 DNA processing protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001165 258.0
YYD1_k127_3978721_3 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000000000000000000000001159 128.0
YYD1_k127_3978721_4 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000000006462 99.0
YYD1_k127_3978721_5 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.0000000000000000005342 90.0
YYD1_k127_3978721_6 Tetratricopeptide repeat - - - 0.0000004365 57.0
YYD1_k127_3978931_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K20974 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 462.0
YYD1_k127_3978931_1 phosphorelay signal transduction system K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007609 383.0
YYD1_k127_3978931_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000204 258.0
YYD1_k127_3988202_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 434.0
YYD1_k127_3988202_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 409.0
YYD1_k127_3988202_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009475 253.0
YYD1_k127_3988202_3 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000001331 125.0
YYD1_k127_3995835_0 3-isopropylmalate dehydratase activity K01703 - 4.2.1.33,4.2.1.35 7.621e-196 618.0
YYD1_k127_3995835_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005521 554.0
YYD1_k127_3995835_2 HMGL-like K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 306.0
YYD1_k127_3995835_3 3-isopropylmalate dehydratase activity K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000006527 209.0
YYD1_k127_3995835_4 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000003117 186.0
YYD1_k127_3995835_5 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000001914 180.0
YYD1_k127_3995835_6 Mut7-C ubiquitin K09122 - - 0.000000000000000002226 87.0
YYD1_k127_4010989_0 transport - - - 5.132e-257 842.0
YYD1_k127_4010989_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 606.0
YYD1_k127_4010989_2 Reverse transcriptase-like K03469 - 3.1.26.4 0.000000000000000000000000000000000003037 145.0
YYD1_k127_4010989_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000002762 145.0
YYD1_k127_4010989_4 C4-type zinc ribbon domain K07164 - - 0.0000000000000000000000000000001485 135.0
YYD1_k127_4051317_0 amino acid K03294 - - 3.02e-208 657.0
YYD1_k127_4051317_1 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 605.0
YYD1_k127_4051317_10 chitinase K01183 - 3.2.1.14 0.00000000000000000000000000007529 128.0
YYD1_k127_4051317_12 Pilus assembly protein, PilO K02664 - - 0.000000000000007313 82.0
YYD1_k127_4051317_13 Fimbrial assembly protein (PilN) K02663 - - 0.000000002187 66.0
YYD1_k127_4051317_14 Tetratricopeptide repeat - - - 0.000000008938 64.0
YYD1_k127_4051317_2 transmembrane transporter activity K08191 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 553.0
YYD1_k127_4051317_3 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 365.0
YYD1_k127_4051317_4 Secretin and TonB N terminus short domain K02666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 340.0
YYD1_k127_4051317_5 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000008694 254.0
YYD1_k127_4051317_6 SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000000000000000000000000000000000000000000001854 241.0
YYD1_k127_4051317_7 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000004791 139.0
YYD1_k127_4051317_8 Type IV pilus assembly protein PilM; K02662 - - 0.00000000000000000000000000000003028 130.0
YYD1_k127_4051317_9 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000002149 133.0
YYD1_k127_4065484_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 593.0
YYD1_k127_4065484_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 556.0
YYD1_k127_4065484_10 Peptidase family M50 - - - 0.0000000000000000000007638 98.0
YYD1_k127_4065484_2 ABC-type multidrug transport system, ATPase and permease K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 475.0
YYD1_k127_4065484_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 358.0
YYD1_k127_4065484_4 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 360.0
YYD1_k127_4065484_5 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000236 276.0
YYD1_k127_4065484_6 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002768 269.0
YYD1_k127_4065484_7 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000313 207.0
YYD1_k127_4065484_8 Stationary phase survival protein, YicC family, YicC_N and DUF1732 domain-containing - - - 0.0000000000000000000000000000000000000000000002108 190.0
YYD1_k127_4065484_9 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000001154 138.0
YYD1_k127_4096980_0 DEAD DEAH box K03724 - - 0.0 1397.0
YYD1_k127_4096980_1 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000001353 222.0
YYD1_k127_4096980_2 FtsH Extracellular K03798 - - 0.000000000000000000004329 96.0
YYD1_k127_4102617_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008624 417.0
YYD1_k127_4102617_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005413 398.0
YYD1_k127_4102617_10 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000000000000000000000000001275 162.0
YYD1_k127_4102617_11 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000005507 134.0
YYD1_k127_4102617_12 TonB dependent receptor - - - 0.00000000001872 67.0
YYD1_k127_4102617_13 serine threonine protein kinase K08884,K12132 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018107,GO:0018193,GO:0018210,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036211,GO:0042304,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.000000008918 61.0
YYD1_k127_4102617_14 Tetratricopeptide repeat K05807 - - 0.00000003808 64.0
YYD1_k127_4102617_15 serine threonine protein kinase K08884,K12132 GO:0000270,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0008360,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009605,GO:0009607,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0010698,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0022603,GO:0022604,GO:0030145,GO:0030203,GO:0030234,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032091,GO:0034645,GO:0036211,GO:0040007,GO:0042304,GO:0042546,GO:0042802,GO:0043085,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043388,GO:0043393,GO:0043412,GO:0044036,GO:0044038,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046872,GO:0046890,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051055,GO:0051098,GO:0051099,GO:0051100,GO:0051101,GO:0051128,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0075136,GO:0080090,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.11.1 0.0000002927 57.0
YYD1_k127_4102617_2 Polysaccharide biosynthesis protein K01784,K08679 - 5.1.3.2,5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005462 364.0
YYD1_k127_4102617_3 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007017 313.0
YYD1_k127_4102617_4 PFAM transferase hexapeptide repeat containing protein K00966 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004196 293.0
YYD1_k127_4102617_5 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005664 283.0
YYD1_k127_4102617_6 protein-glutamate O-methyltransferase activity K00575,K03408,K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003874 288.0
YYD1_k127_4102617_7 Belongs to the ribulose-phosphate 3-epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000004318 261.0
YYD1_k127_4102617_8 response regulator K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000001824 268.0
YYD1_k127_4102617_9 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000002661 175.0
YYD1_k127_4103202_0 L,D-transpeptidase catalytic domain K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 347.0
YYD1_k127_4103202_1 COG2706 3-carboxymuconate cyclase K07404 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000001152 276.0
YYD1_k127_4103202_2 Histidinol phosphatase and related hydrolases of the PHP family K04477 - - 0.00000000000000000000000000000000000000000000000001062 195.0
YYD1_k127_4103202_3 cheY-homologous receiver domain - - - 0.00000000000000000000000000000003881 128.0
YYD1_k127_4103202_4 cheY-homologous receiver domain - - - 0.0000000000000000000000003131 112.0
YYD1_k127_4103202_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000001633 85.0
YYD1_k127_4124503_0 Enoyl-CoA hydratase/isomerase K07539 - 3.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 464.0
YYD1_k127_4124503_1 Alanine dehydrogenase/PNT, C-terminal domain K07538 - 1.1.1.368 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 382.0
YYD1_k127_4124503_2 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000001972 229.0
YYD1_k127_4124503_3 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.00000000000000000000000000000000001265 137.0
YYD1_k127_4130592_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 8.344e-257 810.0
YYD1_k127_4130592_1 Metallopeptidase family M24 K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008358 374.0
YYD1_k127_4130592_2 serine-type endopeptidase activity K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000004522 281.0
YYD1_k127_4130592_3 beta' subunit K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000001869 199.0
YYD1_k127_4130592_4 membrane - - - 0.0000000001707 72.0
YYD1_k127_4130592_6 PFAM Tetratricopeptide repeat - - - 0.0001172 53.0
YYD1_k127_4132231_0 transport - - - 0.0 1160.0
YYD1_k127_4132231_1 Phosphate acyltransferases K01897 - 6.2.1.3 4.903e-241 774.0
YYD1_k127_4132231_10 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000009632 168.0
YYD1_k127_4132231_11 Domain present in phytochromes and cGMP-specific phosphodiesterases. K08968 - 1.8.4.14 0.000000000000000000000000000000000001352 151.0
YYD1_k127_4132231_12 helix_turn_helix gluconate operon transcriptional repressor - - - 0.00000000000000000000000000000000001466 144.0
YYD1_k127_4132231_13 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.00000000000000000000005651 111.0
YYD1_k127_4132231_14 Tetratricopeptide repeat - - - 0.000000000000000000002168 105.0
YYD1_k127_4132231_15 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000002878 94.0
YYD1_k127_4132231_16 LemA family K03744 - - 0.000000001652 62.0
YYD1_k127_4132231_17 Domain of unknown function (DUF4149) - - - 0.00000001552 62.0
YYD1_k127_4132231_18 Belongs to the transketolase family K00615 - 2.2.1.1 0.00008045 56.0
YYD1_k127_4132231_2 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 430.0
YYD1_k127_4132231_3 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004739 382.0
YYD1_k127_4132231_4 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 361.0
YYD1_k127_4132231_5 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007939 361.0
YYD1_k127_4132231_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 308.0
YYD1_k127_4132231_7 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000376 292.0
YYD1_k127_4132231_8 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000001587 248.0
YYD1_k127_4132231_9 Highly conserved protein containing a thioredoxin domain K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000006547 252.0
YYD1_k127_4149079_0 His Kinase A (phosphoacceptor) domain - - - 6.907e-202 650.0
YYD1_k127_4149079_1 GTP-binding protein TypA K06207 - - 1.485e-197 626.0
YYD1_k127_4149079_10 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth - - - 0.0000000000000000000001971 108.0
YYD1_k127_4149079_11 Rieske [2Fe-2S] domain K03886 - - 0.00000000000000000001636 97.0
YYD1_k127_4149079_12 deoxyhypusine monooxygenase activity - - - 0.0000000000000007856 90.0
YYD1_k127_4149079_13 Glucose-6-phosphate dehydrogenase subunit - - - 0.0000000000002864 81.0
YYD1_k127_4149079_14 OprF membrane domain K03286 - - 0.00000117 57.0
YYD1_k127_4149079_15 - - - - 0.0000063 57.0
YYD1_k127_4149079_2 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008225 600.0
YYD1_k127_4149079_3 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 571.0
YYD1_k127_4149079_4 Cytochrome b(C-terminal)/b6/petD K00412 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 353.0
YYD1_k127_4149079_5 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000006648 192.0
YYD1_k127_4149079_6 heat shock protein binding K05516 - - 0.000000000000000000000000000000000000000000000006166 179.0
YYD1_k127_4149079_7 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000747 150.0
YYD1_k127_4149079_8 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000003018 136.0
YYD1_k127_4149079_9 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure - - - 0.000000000000000000000000000009213 123.0
YYD1_k127_4213797_0 siderophore transport K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 501.0
YYD1_k127_4213797_1 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000006877 234.0
YYD1_k127_4230108_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045 524.0
YYD1_k127_4230108_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 382.0
YYD1_k127_4230108_10 Hsp20/alpha crystallin family K13993 - - 0.00000000000000000000000000000000000003271 148.0
YYD1_k127_4230108_11 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000004021 140.0
YYD1_k127_4230108_12 MgtC family K07507 - - 0.00000000000000000000000000000006096 132.0
YYD1_k127_4230108_13 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.000000000000000000000000000000525 124.0
YYD1_k127_4230108_14 Hsp20/alpha crystallin family K13993 - - 0.000000000000000000000000002071 121.0
YYD1_k127_4230108_15 PFAM Peptidase M16 inactive domain K07263 - - 0.00000000000000000000000000597 118.0
YYD1_k127_4230108_16 Belongs to the eIF-2B alpha beta delta subunits family K03680 - - 0.0000000000000003025 91.0
YYD1_k127_4230108_17 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 6.3.5.6,6.3.5.7 0.000000000000003961 88.0
YYD1_k127_4230108_18 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000008326 66.0
YYD1_k127_4230108_19 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000177 58.0
YYD1_k127_4230108_2 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 335.0
YYD1_k127_4230108_3 YmdB-like protein K09769 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004728 316.0
YYD1_k127_4230108_4 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008419 303.0
YYD1_k127_4230108_5 Pfam:DUF2029 - - - 0.0000000000000000000000000000000000000000000000000000000000001838 232.0
YYD1_k127_4230108_6 Memo-like protein K06990 - - 0.0000000000000000000000000000000000000000000000000000001811 206.0
YYD1_k127_4230108_7 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000007634 174.0
YYD1_k127_4230108_8 PFAM AMMECR1 domain protein K09141 - - 0.000000000000000000000000000000000000001628 159.0
YYD1_k127_4230108_9 S1 P1 Nuclease - - - 0.00000000000000000000000000000000000002649 162.0
YYD1_k127_4236919_0 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 481.0
YYD1_k127_4236919_1 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000002113 147.0
YYD1_k127_4236919_2 Protein of unknown function (DUF3810) - - - 0.0000000000000000000000007049 120.0
YYD1_k127_4236919_3 TIGRFAM TonB K03832 - - 0.00000000000000000003531 94.0
YYD1_k127_4236919_4 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.000000389 53.0
YYD1_k127_4237220_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 511.0
YYD1_k127_4237220_1 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 308.0
YYD1_k127_4237220_2 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002412 254.0
YYD1_k127_4237220_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000835 133.0
YYD1_k127_4237220_4 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family K03496 GO:0008150,GO:0022603,GO:0042173,GO:0042174,GO:0043937,GO:0043939,GO:0045595,GO:0045596,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0065007 - 0.000000000000000000000001351 104.0
YYD1_k127_4237220_5 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000006389 70.0
YYD1_k127_4237220_6 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000004934 63.0
YYD1_k127_42656_0 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 409.0
YYD1_k127_42656_1 Belongs to the MlaE permease family K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000172 248.0
YYD1_k127_42656_2 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000002898 248.0
YYD1_k127_42656_3 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000000000001917 216.0
YYD1_k127_42656_4 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - 0.00000003778 56.0
YYD1_k127_4273873_0 Acts as a magnesium transporter K03281,K04767,K06213,K15986 GO:0000287,GO:0003674,GO:0005488,GO:0005515,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015693,GO:0030001,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0051179,GO:0051234,GO:0070838,GO:0072511 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 410.0
YYD1_k127_4273873_1 PhoH-like protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 377.0
YYD1_k127_4273873_2 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000561 329.0
YYD1_k127_4273873_3 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 307.0
YYD1_k127_4273873_4 Transporter associated domain K06189 - - 0.000000000000000000000000000000000000000000000000000000001995 222.0
YYD1_k127_4273873_5 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000008152 184.0
YYD1_k127_4273873_6 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0000000000000000000000000000000000000000006232 158.0
YYD1_k127_4273873_7 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000156 108.0
YYD1_k127_4273873_8 Involved in DNA repair and RecF pathway recombination K03584 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.00000000000000000006708 99.0
YYD1_k127_4334406_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004265 490.0
YYD1_k127_4334406_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000061 425.0
YYD1_k127_4334406_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 351.0
YYD1_k127_4334406_3 SpoIVB peptidase S55 K00973,K02414,K21449 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 326.0
YYD1_k127_4334406_4 Peptidase C26 K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000003031 265.0
YYD1_k127_4334406_5 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 - 1.1.1.25,4.2.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000005615 268.0
YYD1_k127_4334406_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000001635 138.0
YYD1_k127_4334406_7 Putative zinc-finger - - - 0.0002725 53.0
YYD1_k127_4339796_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015 - 1.1.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 310.0
YYD1_k127_4339796_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005036 303.0
YYD1_k127_4339796_10 endonuclease III K01142,K10773 - 3.1.11.2,4.2.99.18 0.0000000000000000000000000000000000000000000000000000001246 214.0
YYD1_k127_4339796_11 Domain of unknown function (DUF4340) - - - 0.0000000000000000000000000000000000000004217 168.0
YYD1_k127_4339796_12 ethanolamine catabolic process K04027 - - 0.00000000000000000000000000000000000001148 147.0
YYD1_k127_4339796_13 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.0000000000000000000000000005193 128.0
YYD1_k127_4339796_14 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028,K08697 - - 0.00000000000000000000000002432 115.0
YYD1_k127_4339796_15 Tetratricopeptide repeat - - - 0.00000000000000000000000009952 114.0
YYD1_k127_4339796_16 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.000000000000000000001222 96.0
YYD1_k127_4339796_17 Ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.000000000000159 74.0
YYD1_k127_4339796_18 thiolester hydrolase activity K06889 - - 0.000000001069 71.0
YYD1_k127_4339796_19 ArsC family K00537 - 1.20.4.1 0.00000003237 58.0
YYD1_k127_4339796_2 ABC-type uncharacterized transport system K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 304.0
YYD1_k127_4339796_20 PBS lyase HEAT-like repeat - - - 0.00000007837 63.0
YYD1_k127_4339796_21 Cation transport ATPase K17686 - 3.6.3.54 0.00001324 50.0
YYD1_k127_4339796_3 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 290.0
YYD1_k127_4339796_4 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005275 280.0
YYD1_k127_4339796_5 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009144 280.0
YYD1_k127_4339796_6 serine-type D-Ala-D-Ala carboxypeptidase activity K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004611 291.0
YYD1_k127_4339796_7 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K04068,K10026 - 1.97.1.4,4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000007027 266.0
YYD1_k127_4339796_8 Threonyl alanyl tRNA synthetase SAD K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000003848 271.0
YYD1_k127_4339796_9 PFAM Class II aldolase adducin K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000001577 235.0
YYD1_k127_4364325_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.65e-279 869.0
YYD1_k127_4364325_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016020,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0040007,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 5.829e-263 818.0
YYD1_k127_4364325_10 PFAM D12 class N6 adenine-specific DNA methyltransferase K06223 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000009661 227.0
YYD1_k127_4364325_11 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000007628 220.0
YYD1_k127_4364325_12 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000008512 207.0
YYD1_k127_4364325_13 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000004909 224.0
YYD1_k127_4364325_14 response to abiotic stimulus - - - 0.00000000000000000000000000000000000000000001578 168.0
YYD1_k127_4364325_15 Methenyl tetrahydrofolate cyclohydrolase - - - 0.00000000000000000000000000002986 125.0
YYD1_k127_4364325_16 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000005574 121.0
YYD1_k127_4364325_17 PFAM DivIVA family protein K04074 - - 0.00000000000000000004099 98.0
YYD1_k127_4364325_18 hydroperoxide reductase activity - - - 0.000000000000000000207 91.0
YYD1_k127_4364325_19 Belongs to the UPF0235 family K09131 - - 0.0000000000005057 76.0
YYD1_k127_4364325_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 575.0
YYD1_k127_4364325_21 - - - - 0.000000001735 64.0
YYD1_k127_4364325_22 MORN repeat variant - - - 0.000005444 58.0
YYD1_k127_4364325_23 hydroperoxide reductase activity - - - 0.00001675 50.0
YYD1_k127_4364325_3 HELICc2 K03722 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 565.0
YYD1_k127_4364325_4 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 445.0
YYD1_k127_4364325_5 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 372.0
YYD1_k127_4364325_6 Peptidase dimerisation domain protein K01295 - 3.4.17.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003496 362.0
YYD1_k127_4364325_7 Amidohydrolase family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 344.0
YYD1_k127_4364325_8 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 314.0
YYD1_k127_4364325_9 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003667 259.0
YYD1_k127_4365755_0 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 319.0
YYD1_k127_4365755_1 PLD-like domain - - - 0.0000000000000000000000000000000000000000000000000000000002198 215.0
YYD1_k127_4365755_2 Domain of unknown function (DUF4976) - - - 0.00000000000000000000001137 110.0
YYD1_k127_4365755_3 Domain of unknown function (DUF4956) - - - 0.0000000000001165 83.0
YYD1_k127_4374844_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 434.0
YYD1_k127_4374844_1 Aerotolerance regulator N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000531 327.0
YYD1_k127_4374844_2 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005782 304.0
YYD1_k127_4374844_3 Domain of unknown function (DUF4159) - - - 0.00000000000000003376 81.0
YYD1_k127_4386904_0 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004944 308.0
YYD1_k127_4386904_1 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016787,GO:0017076,GO:0019538,GO:0019904,GO:0022607,GO:0030163,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0051603,GO:0065003,GO:0070003,GO:0070011,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000001353 233.0
YYD1_k127_4386904_2 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000000000000000000000000000000000000001418 175.0
YYD1_k127_4386904_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000005187 148.0
YYD1_k127_4386904_4 histidine kinase A domain protein K02482 - 2.7.13.3 0.00000000000000009162 92.0
YYD1_k127_4386904_5 Anti-sigma-K factor rskA - - - 0.0000003405 61.0
YYD1_k127_4386904_7 - - - - 0.0006243 51.0
YYD1_k127_4390173_0 AMP-binding enzyme K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006202 492.0
YYD1_k127_4390173_1 oligopeptide transport K03305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 397.0
YYD1_k127_4390173_2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000003832 243.0
YYD1_k127_4390173_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000002207 53.0
YYD1_k127_4395407_0 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009657 431.0
YYD1_k127_4395407_1 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004117 331.0
YYD1_k127_4395407_2 peptidyl-prolyl isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005662 301.0
YYD1_k127_4395407_3 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000003601 189.0
YYD1_k127_4417088_0 copper-translocating P-type ATPase K17686 - 3.6.3.54 2.445e-307 971.0
YYD1_k127_4417088_1 lactate racemase activity K22373 - 5.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 500.0
YYD1_k127_4417088_10 PFAM Rhomboid family protein - - - 0.000000000000000000000000484 119.0
YYD1_k127_4417088_11 PFAM Vitamin B12 dependent methionine synthase, activation - - - 0.0000000000000006066 89.0
YYD1_k127_4417088_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 361.0
YYD1_k127_4417088_3 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 359.0
YYD1_k127_4417088_4 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate K03473 - 1.1.1.290 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001275 286.0
YYD1_k127_4417088_5 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001806 285.0
YYD1_k127_4417088_6 Methionine synthase B12-binding module cap domain protein K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000393 211.0
YYD1_k127_4417088_7 helix_turn_helix, mercury resistance K19591 - - 0.00000000000000000000000000000000000000000000000000861 184.0
YYD1_k127_4417088_8 methyltransferase - - - 0.000000000000000000000000000000000000000000000003315 180.0
YYD1_k127_4417088_9 Metal dependent phosphohydrolases with conserved 'HD' motif. K01139 - 2.7.6.5,3.1.7.2 0.000000000000000000000000000000000000000000007825 169.0
YYD1_k127_4459336_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 485.0
YYD1_k127_4459336_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 464.0
YYD1_k127_4459336_2 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008026 326.0
YYD1_k127_4459336_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000023 288.0
YYD1_k127_4459336_4 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000009926 216.0
YYD1_k127_4459336_5 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000001024 186.0
YYD1_k127_4459336_6 Preprotein translocase SecG subunit K03075 - - 0.000000000000009449 80.0
YYD1_k127_4469740_0 Protein of unknown function DUF116 - - - 3.185e-227 717.0
YYD1_k127_4469740_1 Squalene-hopene cyclase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 597.0
YYD1_k127_4469740_2 enzyme of the MoaA nifB pqqE family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 527.0
YYD1_k127_4469740_3 SRP54-type protein, GTPase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 372.0
YYD1_k127_4469740_4 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 312.0
YYD1_k127_4469740_5 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000203 151.0
YYD1_k127_4469740_6 - - - - 0.00000000000000000000000000000668 121.0
YYD1_k127_4469740_7 beta-subunit of geranylgeranyltransferase or farnesyltransferase K05956 - 2.5.1.60 0.000000000000000000000005212 112.0
YYD1_k127_4469740_8 protein kinase related protein - - - 0.0000000000002792 72.0
YYD1_k127_4480075_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1080.0
YYD1_k127_4480075_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 612.0
YYD1_k127_4480075_10 TIGRFAM Molybdopterin-guanine dinucleotide biosynthesis protein B K03753,K13818 - 2.7.7.77 0.0000000000000000001496 95.0
YYD1_k127_4480075_11 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000211 66.0
YYD1_k127_4480075_12 outer membrane autotransporter barrel domain protein - - - 0.000002998 58.0
YYD1_k127_4480075_2 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 462.0
YYD1_k127_4480075_3 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 297.0
YYD1_k127_4480075_4 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000001091 263.0
YYD1_k127_4480075_5 B12 binding domain K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000001574 203.0
YYD1_k127_4480075_6 peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000006796 181.0
YYD1_k127_4480075_7 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000004424 168.0
YYD1_k127_4480075_8 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000003017 168.0
YYD1_k127_4480075_9 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000001306 152.0
YYD1_k127_4490788_0 Sortilin, neurotensin receptor 3, - - - 1.111e-213 679.0
YYD1_k127_4490788_1 positive regulation of macromolecule biosynthetic process K03973 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005126 261.0
YYD1_k127_4490788_2 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000002268 132.0
YYD1_k127_4490788_4 negative regulation of transcription, DNA-templated K10947 - - 0.000000000000001533 76.0
YYD1_k127_4537281_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1222.0
YYD1_k127_4537281_1 Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006869 428.0
YYD1_k127_4537281_2 DNA modification - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 333.0
YYD1_k127_4537281_3 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000008132 175.0
YYD1_k127_4537281_4 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000001188 175.0
YYD1_k127_4537281_5 His Kinase A (phosphoacceptor) domain - - - 0.00001845 56.0
YYD1_k127_4544736_0 PFAM LmbE family protein K22136 - - 4.835e-247 790.0
YYD1_k127_4544736_1 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008272 525.0
YYD1_k127_4544736_2 PFAM Glycosyl transferase, group 1 K00754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 421.0
YYD1_k127_4544736_3 Bacillithiol biosynthesis BshC K22136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 310.0
YYD1_k127_4544736_4 TIGRFAM carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004644 282.0
YYD1_k127_4544736_5 deacetylase K01463 - - 0.00000000000000000000000000000000000000000000000000000000008704 211.0
YYD1_k127_4544736_6 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000006717 89.0
YYD1_k127_4544736_7 solute binding protein K02035 - - 0.00000000001567 78.0
YYD1_k127_4622931_0 Oxidoreductase NAD-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 322.0
YYD1_k127_4622931_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000109 267.0
YYD1_k127_4622931_2 NADH ubiquinone oxidoreductase 20 kDa subunit K14128 - 1.8.98.5 0.00000000000000000000000000000000000000000000000008182 196.0
YYD1_k127_4622931_3 Belongs to the NiFe NiFeSe hydrogenase large subunit family K14126,K17993 GO:0003674,GO:0005488,GO:0005575,GO:0016151,GO:0032991,GO:0043167,GO:0043169,GO:0044569,GO:0046872,GO:0046914,GO:1902494 1.12.1.3,1.12.1.5,1.8.98.5 0.000000000000000000000000000000000000000000000001403 182.0
YYD1_k127_4622931_4 cheY-homologous receiver domain K07658 - - 0.0008381 44.0
YYD1_k127_4627898_0 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 1.944e-288 909.0
YYD1_k127_4627898_1 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000000000000000000000000000004109 245.0
YYD1_k127_4627898_2 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000007129 169.0
YYD1_k127_4627898_3 Putative zinc-finger K03088 - - 0.00000000000000000000009991 113.0
YYD1_k127_4627898_4 Belongs to the 5'-nucleotidase family - - - 0.0000000000003462 79.0
YYD1_k127_4631647_0 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000454 409.0
YYD1_k127_4631647_1 Peptidase family S41 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 411.0
YYD1_k127_4631647_2 Domain of unknown function (DUF5107) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 326.0
YYD1_k127_4631647_3 Phosphate acyltransferases K00655,K01897 - 2.3.1.51,6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000006329 239.0
YYD1_k127_4632003_0 Glycosyl-hydrolase 97 N-terminal K01187 - 3.2.1.20 3.344e-221 703.0
YYD1_k127_4632003_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01706 - 4.2.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005475 589.0
YYD1_k127_4632003_2 Alginate lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 532.0
YYD1_k127_4632003_3 Alginate lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000534 458.0
YYD1_k127_4632003_4 Major facilitator superfamily K13021 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 379.0
YYD1_k127_4632003_5 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01707 - 4.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004815 283.0
YYD1_k127_4632003_6 PFAM ATP-binding region ATPase domain protein - - - 0.000607 47.0
YYD1_k127_4634123_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 7.68e-263 826.0
YYD1_k127_4634123_1 Nucleotidyl transferase K04042,K11528 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005907 476.0
YYD1_k127_4634123_2 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000861 450.0
YYD1_k127_4634123_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 375.0
YYD1_k127_4634123_4 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006282 380.0
YYD1_k127_4634123_5 Transcriptional regulator, LysR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004259 260.0
YYD1_k127_4634123_6 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000006628 238.0
YYD1_k127_4634123_7 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000002381 218.0
YYD1_k127_4634123_8 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000001681 123.0
YYD1_k127_4634123_9 COG0457 FOG TPR repeat - - - 0.000001365 59.0
YYD1_k127_4639076_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.715e-210 664.0
YYD1_k127_4639076_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 452.0
YYD1_k127_4639076_10 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000004074 211.0
YYD1_k127_4639076_11 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000007751 190.0
YYD1_k127_4639076_12 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000004246 160.0
YYD1_k127_4639076_13 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000002363 138.0
YYD1_k127_4639076_14 Peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000000000002655 147.0
YYD1_k127_4639076_15 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000003579 111.0
YYD1_k127_4639076_16 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000134 76.0
YYD1_k127_4639076_17 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.000000000001191 70.0
YYD1_k127_4639076_18 DNA recombination - - - 0.0000000577 66.0
YYD1_k127_4639076_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006247 361.0
YYD1_k127_4639076_3 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002661 352.0
YYD1_k127_4639076_4 Binding-protein-dependent transport system inner membrane component K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005609 331.0
YYD1_k127_4639076_5 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 342.0
YYD1_k127_4639076_6 Phosphate ABC transporter substrate-binding protein, PhoT family K02040 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000008628 247.0
YYD1_k127_4639076_7 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001205 253.0
YYD1_k127_4639076_8 Protein of unknown function DUF47 K02039,K07220 GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.00000000000000000000000000000000000000000000000000000000000000000002088 239.0
YYD1_k127_4639076_9 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000000002752 237.0
YYD1_k127_4649889_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 450.0
YYD1_k127_4649889_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 394.0
YYD1_k127_4649889_2 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001006 248.0
YYD1_k127_4649889_3 ZIP Zinc transporter K16267 - - 0.00000000000000000000000000000000000000000000000000000000000003554 224.0
YYD1_k127_4649889_4 von Willebrand factor, type A - - - 0.0000000000000000000000000009481 128.0
YYD1_k127_4649889_5 BON domain - - - 0.00000000000000000000000000212 119.0
YYD1_k127_4649889_6 Gram-negative bacterial TonB protein C-terminal - - - 0.0000000000000000000000205 114.0
YYD1_k127_4649889_7 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00008203 55.0
YYD1_k127_4656189_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 6.245e-248 774.0
YYD1_k127_4656189_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 293.0
YYD1_k127_4656189_2 fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007945 247.0
YYD1_k127_4656189_3 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000124 177.0
YYD1_k127_4656189_4 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019904,GO:0022607,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043335,GO:0043933,GO:0044085,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0065003,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.00000000000000000000000000000000005967 135.0
YYD1_k127_4656189_5 PA14 domain - - - 0.0000000007984 72.0
YYD1_k127_4664494_0 L-seryl-tRNA selenium transferase K01042 - 2.9.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007026 428.0
YYD1_k127_4664494_1 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007867 273.0
YYD1_k127_4664494_2 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000003385 212.0
YYD1_k127_4664494_3 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000002265 169.0
YYD1_k127_4664494_4 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000007461 158.0
YYD1_k127_4669021_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1599.0
YYD1_k127_4669021_1 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 578.0
YYD1_k127_4669021_2 ATP dependent DNA ligase C terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004993 525.0
YYD1_k127_4669021_3 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007454 488.0
YYD1_k127_4669021_4 nucleotidyltransferase activity K01154,K07076 - 3.1.21.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 399.0
YYD1_k127_4669021_5 PFAM NAD-dependent epimerase dehydratase K01784,K02473 - 5.1.3.2,5.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 376.0
YYD1_k127_4669021_7 - - - - 0.00000000001338 68.0
YYD1_k127_4669979_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1044.0
YYD1_k127_4669979_1 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 362.0
YYD1_k127_4669979_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000008997 230.0
YYD1_k127_4669979_3 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000115 120.0
YYD1_k127_4688824_0 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 477.0
YYD1_k127_4688824_1 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 421.0
YYD1_k127_4688824_2 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.0000000000000000000000000000000000000000000000000000000000000000001258 238.0
YYD1_k127_4688824_3 energy transducer activity K03832 - - 0.000000000000000000000000000000000000000000000000000000166 217.0
YYD1_k127_4688824_4 CHASE2 K01768 - 4.6.1.1 0.0000000000000000000000000000000000001537 154.0
YYD1_k127_4688824_5 Penicillinase repressor - - - 0.0000000000000000000000000000001864 127.0
YYD1_k127_4688824_6 TIGRFAM TonB K03832 - - 0.00000000004337 74.0
YYD1_k127_4688824_7 PFAM Uncharacterised protein family (UPF0153) K18475 - - 0.0000000002793 72.0
YYD1_k127_4709439_0 choline dehydrogenase activity - - - 3.07e-224 713.0
YYD1_k127_4709439_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 456.0
YYD1_k127_4709439_2 Sortilin, neurotensin receptor 3, - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006278 429.0
YYD1_k127_4709439_4 SMART phosphoesterase PHP domain protein - - - 0.000000001407 67.0
YYD1_k127_4709439_5 FAD dependent oxidoreductase K00301 - 1.5.3.1 0.00003017 46.0
YYD1_k127_4715928_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 1.21e-280 883.0
YYD1_k127_4715928_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008737 519.0
YYD1_k127_4715928_10 Glutamine amidotransferases class-II K00764 - 2.4.2.14 0.00000000016 64.0
YYD1_k127_4715928_11 Probable zinc-ribbon domain - - - 0.0000000008363 60.0
YYD1_k127_4715928_2 Belongs to the peptidase M16 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004126 449.0
YYD1_k127_4715928_3 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 399.0
YYD1_k127_4715928_4 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000049,GO:0000154,GO:0001510,GO:0002935,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016426,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0070040,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:0140102,GO:1901360,GO:1901363 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006062 332.0
YYD1_k127_4715928_5 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 324.0
YYD1_k127_4715928_6 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001925 294.0
YYD1_k127_4715928_7 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000003086 194.0
YYD1_k127_4715928_8 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000000000000004549 95.0
YYD1_k127_4715928_9 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000003284 95.0
YYD1_k127_4723395_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 568.0
YYD1_k127_4723395_1 Belongs to the proline racemase family K01777 - 5.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 352.0
YYD1_k127_4723395_2 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005698 295.0
YYD1_k127_4723395_3 Tetratricopeptide repeat - - - 0.0000000000000000000000007481 118.0
YYD1_k127_4723395_4 - - - - 0.0000000000000000000001102 105.0
YYD1_k127_4723395_5 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000002228 90.0
YYD1_k127_4723395_6 COG2230 Cyclopropane fatty acid synthase and related methyltransferases K00574 - 2.1.1.79 0.000000000000000496 83.0
YYD1_k127_4733788_0 glutamate dehydrogenase [NAD(P)+] activity K00260,K00261,K00262 GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.2,1.4.1.3,1.4.1.4 4.196e-209 660.0
YYD1_k127_4733788_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 498.0
YYD1_k127_4733788_2 Acyl-CoA dehydrogenase, C-terminal domain K00248,K09478 - 1.3.8.1,1.3.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000004587 260.0
YYD1_k127_4733788_3 oxidoreductase activity - - - 0.000000000000000000000000002168 130.0
YYD1_k127_4743946_0 Oxidoreductase molybdopterin binding domain K07147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837 305.0
YYD1_k127_4743946_1 PFAM Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001909 240.0
YYD1_k127_4743946_2 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000001505 172.0
YYD1_k127_4743946_3 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000000000000007902 147.0
YYD1_k127_4743946_4 oxidoreductase activity - - - 0.0000000000000009299 91.0
YYD1_k127_4747551_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006474 317.0
YYD1_k127_4747551_1 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003088 265.0
YYD1_k127_4747551_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000005057 204.0
YYD1_k127_4747551_3 Belongs to the ompA family K03286 - - 0.000000000000000004886 98.0
YYD1_k127_4747551_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117,K03646 - - 0.0000000000000001651 82.0
YYD1_k127_4763787_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007173 481.0
YYD1_k127_4763787_1 Surface antigen K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002206 263.0
YYD1_k127_4763787_2 Pyridoxal-phosphate dependent enzyme K01751 - 4.3.1.15 0.000000000000000000000000000000000000000000000000000002373 209.0
YYD1_k127_4763787_3 TIGRFAM TonB K03832 - - 0.000000000000000000000002794 111.0
YYD1_k127_4763787_4 chlorophyll binding K03640 - - 0.000000000000000000002948 109.0
YYD1_k127_4763787_5 protein conserved in bacteria K09800 - - 0.000000000000000008178 100.0
YYD1_k127_4763787_6 SPTR Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000005022 91.0
YYD1_k127_4763959_0 Domain of unknown function (DUF5107) - - - 1.365e-204 660.0
YYD1_k127_4763959_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004166 338.0
YYD1_k127_47715_0 aminopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003746 552.0
YYD1_k127_47715_1 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 340.0
YYD1_k127_47715_2 Probably functions as a manganese efflux pump - - - 0.0000000000000000000000000000000000000000001503 181.0
YYD1_k127_47715_3 Glycine cleavage H-protein - - - 0.000000000000000000000000000000000000000001609 162.0
YYD1_k127_47715_4 Protein kinase domain K12132 - 2.7.11.1 0.0008826 50.0
YYD1_k127_4807874_0 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003866 548.0
YYD1_k127_4807874_1 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 546.0
YYD1_k127_4807874_2 Pyridoxamine 5'-phosphate oxidase K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000002471 194.0
YYD1_k127_4807874_3 - - - - 0.0000000000000000000001054 99.0
YYD1_k127_4812122_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005412 255.0
YYD1_k127_4812122_1 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000002338 223.0
YYD1_k127_4812122_2 Histidine kinase K02668,K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000611 220.0
YYD1_k127_4812122_3 - - - - 0.000000000000000000000000000000000000000000000000000006748 210.0
YYD1_k127_4812122_4 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000007308 174.0
YYD1_k127_4862835_0 serine-type peptidase activity - - - 2.521e-198 658.0
YYD1_k127_4862835_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006393 441.0
YYD1_k127_4862835_2 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 292.0
YYD1_k127_4862835_3 Histidine kinase - - - 0.000000000006426 76.0
YYD1_k127_4884423_0 - - - - 0.000000000000000003178 98.0
YYD1_k127_4884423_1 domain, Protein - - - 0.0000000000006439 77.0
YYD1_k127_4884423_2 Integrase catalytic - - - 0.0000000001183 72.0
YYD1_k127_4884423_4 Integrase catalytic - - - 0.0001686 48.0
YYD1_k127_4897338_0 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 614.0
YYD1_k127_4897338_1 Protein of unknown function (DUF1549) - - - 0.000000000000000000004009 98.0
YYD1_k127_4908553_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001238 289.0
YYD1_k127_4908553_1 Fungalysin/Thermolysin Propeptide Motif K08603 - 3.4.24.27 0.0000000000000000000000000000000000000000000000000000000000000000000000004806 268.0
YYD1_k127_4908553_2 SMART Metal-dependent phosphohydrolase, HD region - - - 0.0000000000000000000000000000000000000000000000000000001121 212.0
YYD1_k127_4908553_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000001334 154.0
YYD1_k127_4908553_4 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000001263 82.0
YYD1_k127_4908553_5 AntiSigma factor - - - 0.0007529 46.0
YYD1_k127_492753_0 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005586 304.0
YYD1_k127_492753_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 - 6.1.1.17,6.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000002464 251.0
YYD1_k127_492753_2 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000001638 182.0
YYD1_k127_492753_3 Large family of predicted nucleotide-binding domains - - - 0.000000000000000000000000000000000000000000000001687 177.0
YYD1_k127_492753_4 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000001207 94.0
YYD1_k127_4937648_0 transporter, DctM subunit K11690 - - 6.754e-225 711.0
YYD1_k127_4937648_1 HupE / UreJ protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 429.0
YYD1_k127_4937648_2 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000043 353.0
YYD1_k127_4937648_3 TRAP transporter T-component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 341.0
YYD1_k127_4937648_4 PFAM TRAP dicarboxylate transporter- DctP subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 314.0
YYD1_k127_4937648_5 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000001701 203.0
YYD1_k127_4937648_6 PFAM von Willebrand factor type A - - - 0.0000000000000000000000597 109.0
YYD1_k127_4937648_7 Sortilin, neurotensin receptor 3, - - - 0.00004313 48.0
YYD1_k127_4937648_8 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0006375 52.0
YYD1_k127_4941836_0 COG3119 Arylsulfatase A K01134 - 3.1.6.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009415 612.0
YYD1_k127_4941836_1 Glycosyl hydrolases family 2, TIM barrel domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005075 549.0
YYD1_k127_4941836_2 PFAM Aminotransferase class I and II K05825 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 529.0
YYD1_k127_4941836_3 Molybdenum cofactor sulfurase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004174 500.0
YYD1_k127_4941836_4 protein-disulfide reductase activity K01829,K04084 - 1.8.1.8,5.3.4.1 0.0000000000005034 71.0
YYD1_k127_4941836_5 subunit of a heme lyase K02200 - - 0.00000000808 63.0
YYD1_k127_4956721_0 Transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001085 248.0
YYD1_k127_4956721_1 Asparagine synthase - - - 0.000000000000000000000000000000000000008252 166.0
YYD1_k127_4956721_2 Chitin synthase - - - 0.0000000000000000000001581 112.0
YYD1_k127_4956721_3 PFAM 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) - - - 0.000000007517 66.0
YYD1_k127_4956721_4 Glycosyltransferase family 87 - - - 0.0000003474 62.0
YYD1_k127_4956721_5 HEAT repeats - - - 0.00001634 57.0
YYD1_k127_4956721_6 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.0003668 51.0
YYD1_k127_4989889_0 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003891 475.0
YYD1_k127_4989889_1 TIGRFAM deoxyguanosinetriphosphate triphosphohydrolase K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 394.0
YYD1_k127_4989889_2 cytochrome oxidase assembly K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000071 309.0
YYD1_k127_4989889_3 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000007103 251.0
YYD1_k127_4989889_4 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000006645 70.0
YYD1_k127_4989889_5 TonB C terminal - - - 0.00000000001447 75.0
YYD1_k127_5008635_0 zinc ion binding K02347,K04477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004939 524.0
YYD1_k127_5008635_1 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008611 427.0
YYD1_k127_5008635_2 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005811 406.0
YYD1_k127_5008635_3 Transcriptional regulator K07729 - - 0.00000000000000000000006685 107.0
YYD1_k127_5009705_0 membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 584.0
YYD1_k127_5009705_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K03438,K13292 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009249,GO:0009987,GO:0010467,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0031224,GO:0031226,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0051604,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000003235 249.0
YYD1_k127_5009705_2 Zn_pept - - - 0.00000000000000000000000000000000001697 141.0
YYD1_k127_5009705_3 negative regulation of transcription, DNA-templated K10947 - - 0.00000000000000000000000000007644 119.0
YYD1_k127_5009705_4 SnoaL-like polyketide cyclase - - - 0.0000000000000008957 83.0
YYD1_k127_5020851_0 COG0477 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 472.0
YYD1_k127_5020851_1 Putative esterase K07214 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004272 401.0
YYD1_k127_5020851_2 Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007506 374.0
YYD1_k127_5020851_3 Orotidine 5'-phosphate decarboxylase / HUMPS family K08093 - 4.1.2.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 314.0
YYD1_k127_5020851_4 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 298.0
YYD1_k127_5020851_5 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 288.0
YYD1_k127_5020851_6 myo-inosose-2 dehydratase activity - - - 0.000000000000000000003927 100.0
YYD1_k127_5040057_0 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000081 386.0
YYD1_k127_5040057_1 PFAM Aminotransferase, class I K10907 - - 0.00000000000000000000000000000000000000000000000001126 195.0
YYD1_k127_5040057_2 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000000000000000000000001935 177.0
YYD1_k127_5040057_3 Protein of unknown function (DUF418) K07148 - - 0.000000000000000000000000000000000000000001452 171.0
YYD1_k127_5040057_4 positive regulation of growth - - - 0.0000000000000000001694 90.0
YYD1_k127_5040057_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000001609 90.0
YYD1_k127_5040057_6 DUF218 domain - - - 0.0000000000002445 80.0
YYD1_k127_5040057_7 Ami_2 - - - 0.000000000003283 79.0
YYD1_k127_5057001_0 Zn_pept - - - 7.295e-200 641.0
YYD1_k127_5057001_1 Peptidase S46 - - - 4.188e-195 632.0
YYD1_k127_5057001_2 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000004919 215.0
YYD1_k127_5057001_3 Thiamine-binding protein - - - 0.0000000000000000000000000000000000003436 141.0
YYD1_k127_5057001_4 Hemerythrin hhe cation binding - - - 0.00000000000000000000000004186 117.0
YYD1_k127_5057001_5 PFAM RNP-1 like RNA-binding protein - - - 0.0000000000000000000000001659 110.0
YYD1_k127_5058973_0 Cystathionine beta-synthase K01697 - 4.2.1.22 4.495e-204 644.0
YYD1_k127_5058973_1 Sodium:alanine symporter family K03310 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008411 404.0
YYD1_k127_5058973_10 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000001233 97.0
YYD1_k127_5058973_11 Sulfatase - - - 0.0001531 53.0
YYD1_k127_5058973_2 Pfam Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003592 383.0
YYD1_k127_5058973_3 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001933 273.0
YYD1_k127_5058973_4 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000002441 219.0
YYD1_k127_5058973_5 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000003882 209.0
YYD1_k127_5058973_6 PFAM Hemerythrin HHE cation binding domain K09155 - - 0.00000000000000000000000000000000000000000000000000004833 196.0
YYD1_k127_5058973_7 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000001689 153.0
YYD1_k127_5058973_8 Protein of unknown function, DUF547 - - - 0.000000000000000000000000000000000000004116 158.0
YYD1_k127_5058973_9 Uncharacterized conserved protein (DUF2277) - - - 0.000000000000000000000000000000001435 132.0
YYD1_k127_50723_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 3.878e-248 787.0
YYD1_k127_50723_1 MotA TolQ ExbB proton channel K03561,K03562 - - 0.0000000000000000000000000000000000000000000000000000000000002117 220.0
YYD1_k127_50723_10 Tetratricopeptide repeat - - - 0.00004309 55.0
YYD1_k127_50723_2 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000001325 162.0
YYD1_k127_50723_3 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000005426 165.0
YYD1_k127_50723_4 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000001249 151.0
YYD1_k127_50723_5 TIGRFAM TonB family K03832 - - 0.0000000000000000000000000000000001328 142.0
YYD1_k127_50723_6 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.0000000000000000000000008546 109.0
YYD1_k127_50723_7 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.0000000000000000000007986 102.0
YYD1_k127_50723_8 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000002101 93.0
YYD1_k127_50723_9 - - - - 0.000000000001216 76.0
YYD1_k127_5077716_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.985e-281 886.0
YYD1_k127_5077716_1 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009896 534.0
YYD1_k127_5077716_2 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003087 401.0
YYD1_k127_5077716_3 Phage integrase, N-terminal SAM-like domain K03733,K04763 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003289 280.0
YYD1_k127_5077716_4 DNA processing protein DprA K04096 - - 0.00000000000000000000000000000202 124.0
YYD1_k127_5092336_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007111 545.0
YYD1_k127_5092336_1 Aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000695 537.0
YYD1_k127_5092336_2 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007188 416.0
YYD1_k127_5092336_3 Iron-sulfur cluster insertion protein ErpA K15724 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0019538,GO:0022607,GO:0031163,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0071704,GO:0071840,GO:1901564 - 0.0000000000000000000000000000000001042 136.0
YYD1_k127_5092336_4 Belongs to the Fur family K03711 - - 0.000000000000000000000000001112 122.0
YYD1_k127_5092521_0 Amidohydrolase family K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 531.0
YYD1_k127_5092521_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007638 514.0
YYD1_k127_5092521_2 TonB-dependent Receptor Plug Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005877 269.0
YYD1_k127_5092521_3 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000000000000000000000000000000000000000000000000000007802 224.0
YYD1_k127_5092521_4 Putative regulatory protein - - - 0.0000000002756 63.0
YYD1_k127_5103559_0 Penicillin-Binding Protein C-terminus Family K05367 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 454.0
YYD1_k127_5103559_1 Large extracellular alpha-helical protein K06894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 426.0
YYD1_k127_5103559_2 Uncharacterized protein conserved in bacteria (DUF2200) - - - 0.00000000000000000000000000000000000000000000000000000000000002999 215.0
YYD1_k127_5103559_3 Phage integrase family - - - 0.000000000000000001377 86.0
YYD1_k127_5108499_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000001663 243.0
YYD1_k127_5108499_1 lyase activity K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000002615 259.0
YYD1_k127_5108499_2 HD domain K07814 - - 0.00000000000000000000000000002112 125.0
YYD1_k127_5108499_3 TLC ATP/ADP transporter K03301 - - 0.000000000000000000000001137 117.0
YYD1_k127_5121248_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370,K17050 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009898,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0031235,GO:0032991,GO:0042126,GO:0043436,GO:0043546,GO:0044237,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0097159,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:0098803,GO:1901363,GO:1902494,GO:1990204,GO:2001057 1.7.5.1 0.0 1520.0
YYD1_k127_5121248_1 Respiratory nitrate reductase beta C-terminal K00371,K17051 - 1.7.5.1 3.184e-207 665.0
YYD1_k127_516252_0 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 611.0
YYD1_k127_516252_1 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 374.0
YYD1_k127_516252_2 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002858 300.0
YYD1_k127_516252_3 Histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000003039 273.0
YYD1_k127_516252_4 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) K01083 - 3.1.3.8 0.0000000000000000000000000000000000000000000000000000000000000000651 234.0
YYD1_k127_516252_5 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000001131 231.0
YYD1_k127_516252_6 membrane - - - 0.000000000000000000000000000000000000000000000000001695 198.0
YYD1_k127_516252_7 RNA recognition motif - - - 0.00000000000000000000000000118 116.0
YYD1_k127_516252_8 - - - - 0.0000000002075 66.0
YYD1_k127_5175194_0 Protein of unknown function (DUF1553) - - - 0.0 1164.0
YYD1_k127_5175194_1 alpha-L-rhamnosidase - - - 1.686e-304 963.0
YYD1_k127_5175194_10 IclR helix-turn-helix domain K10439 - - 0.000000000000000000000000000000000000000000000000000009984 192.0
YYD1_k127_5175194_11 - - - - 0.000000000000000000005718 108.0
YYD1_k127_5175194_12 AP endonuclease family 2 C terminus - - - 0.000000000000003619 88.0
YYD1_k127_5175194_13 - - - - 0.0002307 51.0
YYD1_k127_5175194_2 Protein of unknown function (DUF1501) - - - 3.089e-225 735.0
YYD1_k127_5175194_3 Belongs to the purine-cytosine permease (2.A.39) family - - - 1.839e-205 648.0
YYD1_k127_5175194_4 Glycosyl Hydrolase Family 88 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 580.0
YYD1_k127_5175194_5 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 568.0
YYD1_k127_5175194_6 transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000514 446.0
YYD1_k127_5175194_7 PFAM Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005902 287.0
YYD1_k127_5175194_8 and related - - - 0.00000000000000000000000000000000000000000000000000000000000000000001493 250.0
YYD1_k127_5175194_9 FCD - - - 0.0000000000000000000000000000000000000000000000000000000000001913 219.0
YYD1_k127_5202753_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 2.858e-274 865.0
YYD1_k127_5202753_1 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 432.0
YYD1_k127_5202753_10 TonB-dependent receptor plug K02014 - - 0.0000000000000000000005079 96.0
YYD1_k127_5202753_11 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.00000000000000011 82.0
YYD1_k127_5202753_12 TIGRFAM RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1 K03088 - - 0.0000000000003716 77.0
YYD1_k127_5202753_13 Glutaredoxin - - - 0.000000000001374 74.0
YYD1_k127_5202753_14 Belongs to the glycosyl hydrolase family 6 - - - 0.0000001547 53.0
YYD1_k127_5202753_15 Belongs to the sulfur carrier protein TusA family - - - 0.0000005434 60.0
YYD1_k127_5202753_2 dehydrogenases and related proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 404.0
YYD1_k127_5202753_3 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 333.0
YYD1_k127_5202753_4 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 304.0
YYD1_k127_5202753_5 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 GO:0002097,GO:0002100,GO:0003674,GO:0003824,GO:0004000,GO:0005488,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008251,GO:0008270,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0046914,GO:0052717,GO:0071704,GO:0090304,GO:1901360 3.5.4.33 0.00000000000000000000000000000000000000000000000000000006698 198.0
YYD1_k127_5202753_6 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000006336 194.0
YYD1_k127_5202753_7 G/U mismatch-specific uracil-DNA glycosylase activity K01934,K03649 GO:0000700,GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008263,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.28,6.3.3.2 0.0000000000000000000000000000000000000000000001856 177.0
YYD1_k127_5202753_8 EVE domain - - - 0.000000000000000000000000000000000000001511 162.0
YYD1_k127_5202753_9 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000001248 135.0
YYD1_k127_5213197_0 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000001576 228.0
YYD1_k127_5213197_1 glycolate biosynthetic process K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000111 170.0
YYD1_k127_5213197_2 Copper/zinc superoxide dismutase (SODC) K04565 - 1.15.1.1 0.0000000000000000000000000000000000007721 145.0
YYD1_k127_5213197_3 MobA-like NTP transferase domain K07141,K19190 - 1.1.1.328,2.7.7.76 0.000000000001005 72.0
YYD1_k127_5213197_4 Cold shock protein domain - - - 0.00000000001151 67.0
YYD1_k127_5213197_5 PFAM ABC transporter related K01995 - - 0.0000003532 62.0
YYD1_k127_5256525_0 PFAM tRNA synthetase, class II (D, K and N) K01893 - 6.1.1.22 1.015e-199 632.0
YYD1_k127_5256525_1 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007812 272.0
YYD1_k127_5256525_2 phosphotransferase related to Ser Thr protein kinases K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000008133 235.0
YYD1_k127_5256525_3 - - - - 0.00000000000000000000000000000000000000000000000000000005654 211.0
YYD1_k127_5256525_4 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000001046 152.0
YYD1_k127_5256525_5 Nucleotidyl transferase K00966 - 2.7.7.13 0.000000000000000000000000000000000004582 149.0
YYD1_k127_5256525_6 PFAM Adenylate cyclase K05873 - 4.6.1.1 0.0000000000000000000001505 104.0
YYD1_k127_5256525_7 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.00000000000000000000149 100.0
YYD1_k127_5256525_8 Trypsin K04771 - 3.4.21.107 0.000001696 52.0
YYD1_k127_5269122_0 GDP-mannose 4,6 dehydratase K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 468.0
YYD1_k127_5269122_1 Bacterial sugar transferase K03606 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 431.0
YYD1_k127_5269122_10 Nuclear mitotic apparatus protein 1 K16808 GO:0000132,GO:0000226,GO:0000235,GO:0000278,GO:0000922,GO:0001578,GO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005818,GO:0005819,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005881,GO:0005886,GO:0005938,GO:0006355,GO:0006357,GO:0006996,GO:0006997,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007088,GO:0007163,GO:0007346,GO:0008017,GO:0008022,GO:0008092,GO:0008150,GO:0008289,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010556,GO:0010564,GO:0010638,GO:0010646,GO:0010647,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016363,GO:0019219,GO:0019222,GO:0019897,GO:0019898,GO:0019904,GO:0022402,GO:0022607,GO:0023051,GO:0023056,GO:0030010,GO:0030425,GO:0030510,GO:0030513,GO:0030856,GO:0030858,GO:0030863,GO:0030953,GO:0030981,GO:0031110,GO:0031112,GO:0031113,GO:0031116,GO:0031122,GO:0031323,GO:0031326,GO:0031334,GO:0031616,GO:0031974,GO:0031981,GO:0032271,GO:0032273,GO:0032386,GO:0032388,GO:0032879,GO:0032880,GO:0032886,GO:0032887,GO:0032888,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034399,GO:0035091,GO:0035371,GO:0036449,GO:0036477,GO:0040001,GO:0042634,GO:0042635,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0044085,GO:0044087,GO:0044089,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045595,GO:0045597,GO:0045604,GO:0045606,GO:0045616,GO:0045618,GO:0045682,GO:0045684,GO:0045787,GO:0045840,GO:0045931,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050793,GO:0050794,GO:0051010,GO:0051011,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051179,GO:0051225,GO:0051233,GO:0051234,GO:0051239,GO:0051240,GO:0051252,GO:0051293,GO:0051294,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051726,GO:0051783,GO:0051785,GO:0051797,GO:0051798,GO:0051983,GO:0051984,GO:0055028,GO:0055048,GO:0060236,GO:0060255,GO:0060341,GO:0061673,GO:0062033,GO:0065007,GO:0070013,GO:0070507,GO:0070840,GO:0070925,GO:0071840,GO:0071944,GO:0072686,GO:0080090,GO:0090068,GO:0090092,GO:0090100,GO:0090169,GO:0090224,GO:0090235,GO:0090287,GO:0097427,GO:0097431,GO:0097435,GO:0097447,GO:0097458,GO:0097574,GO:0097575,GO:0097718,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:0099738,GO:0110028,GO:0120025,GO:0120038,GO:1902115,GO:1902117,GO:1902363,GO:1902365,GO:1902846,GO:1902850,GO:1902903,GO:1902905,GO:1903047,GO:1903506,GO:1903827,GO:1903829,GO:1904375,GO:1904377,GO:1904776,GO:1904778,GO:1905720,GO:1905818,GO:1905820,GO:1905832,GO:1990023,GO:1990752,GO:2000026,GO:2000112,GO:2001141,GO:2001252 - 0.0005296 54.0
YYD1_k127_5269122_2 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644 386.0
YYD1_k127_5269122_3 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 325.0
YYD1_k127_5269122_4 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000007201 135.0
YYD1_k127_5269122_5 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 0.000000000000000000000000000000001611 146.0
YYD1_k127_5269122_6 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.0000000000000000000000009702 118.0
YYD1_k127_5269122_7 Transporter major facilitator family protein - - - 0.000000000000001486 87.0
YYD1_k127_5269122_8 Tetratricopeptide repeat - - - 0.0000001857 64.0
YYD1_k127_5269122_9 S-layer homology domain - - - 0.0004508 53.0
YYD1_k127_5275114_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 2.049e-209 672.0
YYD1_k127_5275114_1 PFAM aminotransferase, class I K00812,K10907 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 333.0
YYD1_k127_5275114_10 AntiSigma factor - - - 0.0002789 50.0
YYD1_k127_5275114_2 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000000000000000000001901 253.0
YYD1_k127_5275114_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000004283 220.0
YYD1_k127_5275114_4 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000002509 206.0
YYD1_k127_5275114_5 Methyltransferase K08316 - 2.1.1.171 0.0000000000000000000000000000000000005839 145.0
YYD1_k127_5275114_6 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000803 143.0
YYD1_k127_5275114_7 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.0000000000000000000000551 102.0
YYD1_k127_5275114_8 Zincin-like metallopeptidase K00930 - 2.7.2.8 0.000000000000000000002958 106.0
YYD1_k127_5275114_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 GO:0000988,GO:0000990,GO:0003674,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043254,GO:0044087,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.000000000000002381 84.0
YYD1_k127_5287326_0 Cytochrome c3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 381.0
YYD1_k127_5287326_1 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006404 371.0
YYD1_k127_5287326_2 eRF1 domain 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 330.0
YYD1_k127_5287326_3 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 299.0
YYD1_k127_5287326_4 denitrification pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002278 273.0
YYD1_k127_5287326_5 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007057 268.0
YYD1_k127_5287326_6 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000001311 196.0
YYD1_k127_5287326_8 FAD dependent oxidoreductase - - - 0.0000000000007774 79.0
YYD1_k127_5431796_0 alpha amylase catalytic K01182,K05343 - 3.2.1.1,3.2.1.10,5.4.99.16 0.0 1221.0
YYD1_k127_5431796_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 1.281e-308 960.0
YYD1_k127_5431796_2 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 2.622e-221 704.0
YYD1_k127_5431796_3 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 344.0
YYD1_k127_5431796_4 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006124 327.0
YYD1_k127_5431796_5 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004702 321.0
YYD1_k127_5431796_6 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000005258 184.0
YYD1_k127_5431796_7 Domain of unknown function (DUF4112) - - - 0.00000000000000000000000002466 114.0
YYD1_k127_5431796_8 Protein of unknown function (DUF3365) - - - 0.00000000000000000000001066 109.0
YYD1_k127_5442866_0 ABC transporter K03701 - - 0.0 1187.0
YYD1_k127_5442866_1 C-terminus of AA_permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 445.0
YYD1_k127_5442866_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0008654,GO:0008759,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000331 291.0
YYD1_k127_5442866_3 Carboxylesterase family K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000001383 237.0
YYD1_k127_5442866_4 TIGRFAM amino acid adenylation domain - - - 0.0000000002306 66.0
YYD1_k127_546335_0 ATPase with chaperone activity K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 538.0
YYD1_k127_546335_1 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000009808 172.0
YYD1_k127_546335_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000001625 159.0
YYD1_k127_546335_3 Histidyl-tRNA synthetase - - - 0.000000000001008 75.0
YYD1_k127_546335_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0004736 42.0
YYD1_k127_5463785_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000007459 153.0
YYD1_k127_5463785_1 Putative adhesin - - - 0.0000000000000000002152 101.0
YYD1_k127_5463785_2 enzyme binding K00567,K07443 - 2.1.1.63 0.000000000000002318 80.0
YYD1_k127_5463785_3 - - - - 0.0000000001227 71.0
YYD1_k127_5488781_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1575.0
YYD1_k127_5488781_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 299.0
YYD1_k127_5488781_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342,K03703,K04096 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 2.7.7.7 0.0000000000000000000000000000000003062 150.0
YYD1_k127_5488781_3 von Willebrand factor, type A K07114 - - 0.000000000000000000000007253 117.0
YYD1_k127_5488781_4 - - - - 0.0000000001133 63.0
YYD1_k127_5488781_5 Protein kinase domain K12132 - 2.7.11.1 0.0000002485 59.0
YYD1_k127_5498292_0 PFAM Catalase domain protein K03781 - 1.11.1.6 4.906e-314 985.0
YYD1_k127_5498292_1 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 3.473e-241 751.0
YYD1_k127_5498292_2 PFAM Cys Met metabolism K01760,K01761 - 4.4.1.11,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 460.0
YYD1_k127_5498292_3 Transglycosylase K05366 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042546,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 421.0
YYD1_k127_5498292_4 Xylose isomerase-like TIM barrel K01816 - 5.3.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 333.0
YYD1_k127_5498292_5 acyl-CoA dehydrogenase activity K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000001908 222.0
YYD1_k127_5498329_0 lysine biosynthetic process via aminoadipic acid - - - 6.851e-225 719.0
YYD1_k127_5498329_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004251 614.0
YYD1_k127_5498329_2 FAD dependent oxidoreductase K00301 - 1.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006641 374.0
YYD1_k127_5498329_3 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 358.0
YYD1_k127_5498329_4 deoxyhypusine monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 295.0
YYD1_k127_5498329_5 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003436 270.0
YYD1_k127_5498329_6 Participates in the control of copper homeostasis K06201 - - 0.00000000000000000000000000004188 125.0
YYD1_k127_5498329_7 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000001546 79.0
YYD1_k127_5512592_0 Protein of unknown function, DUF255 K06888 - - 3.078e-213 683.0
YYD1_k127_5512592_1 pfam abc K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003533 294.0
YYD1_k127_5512592_2 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.00000000000000000000000000000000000000000000000000000001093 207.0
YYD1_k127_5512592_3 intracellular protease K05520 - 3.5.1.124 0.00000000000000000000000000000000000000000000005759 174.0
YYD1_k127_5512592_4 membrane - - - 0.000000000000007456 88.0
YYD1_k127_5514241_0 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 454.0
YYD1_k127_5514241_1 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 411.0
YYD1_k127_5514241_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001105 267.0
YYD1_k127_5514241_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001297 254.0
YYD1_k127_5514241_4 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000003465 230.0
YYD1_k127_5514241_5 DoxX K16937 - 1.8.5.2 0.00000000000000000000000000000000002618 153.0
YYD1_k127_5524869_0 Phosphotriesterase family K07048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 329.0
YYD1_k127_5524869_1 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006778 274.0
YYD1_k127_5524869_2 LysM domain - - - 0.0000000000000000000000000000000000000000000000000005706 192.0
YYD1_k127_5524869_3 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000004167 126.0
YYD1_k127_5527614_0 Amidohydrolase family K06015 - 3.5.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 449.0
YYD1_k127_5527614_1 mismatched DNA binding K03555 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 416.0
YYD1_k127_5527614_2 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000001486 274.0
YYD1_k127_5527614_3 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000012 215.0
YYD1_k127_5527614_4 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000001761 190.0
YYD1_k127_5527923_0 PFAM Prolyl oligopeptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 605.0
YYD1_k127_5527923_1 Major facilitator K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 459.0
YYD1_k127_5527923_2 PFAM NAD dependent epimerase dehydratase family K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008648 335.0
YYD1_k127_5527923_3 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002926 271.0
YYD1_k127_5527923_4 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003639 257.0
YYD1_k127_5527923_5 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - - - 0.00000000000000000000000000000000000000000000000000004296 205.0
YYD1_k127_5527923_6 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000006716 163.0
YYD1_k127_5527923_7 FAD dependent oxidoreductase - - - 0.00000000000000000003232 104.0
YYD1_k127_5527923_8 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K10778 - 2.1.1.63 0.000000000004609 66.0
YYD1_k127_5528971_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 3.463e-199 638.0
YYD1_k127_5528971_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 492.0
YYD1_k127_5528971_10 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000001752 59.0
YYD1_k127_5528971_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 351.0
YYD1_k127_5528971_3 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0031224,GO:0031226,GO:0032940,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051205,GO:0051234,GO:0051259,GO:0051260,GO:0051641,GO:0061024,GO:0065003,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001054 299.0
YYD1_k127_5528971_4 PFAM Cobyrinic acid ac-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001926 255.0
YYD1_k127_5528971_5 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.000000000000000000000000003823 119.0
YYD1_k127_5528971_6 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000001152 96.0
YYD1_k127_5528971_7 R3H domain protein K06346 - - 0.0000000000000000001949 93.0
YYD1_k127_5528971_8 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000001503 83.0
YYD1_k127_5528971_9 Belongs to the bacterial ribosomal protein bL34 family K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000004554 74.0
YYD1_k127_5537390_0 TonB-dependent receptor - - - 2.893e-257 835.0
YYD1_k127_5537390_1 Alpha-L-arabinofuranosidase C-terminus K01209 - 3.2.1.55 4.686e-199 634.0
YYD1_k127_5537390_2 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004042 493.0
YYD1_k127_5537390_3 Involved in the anomeric conversion of L-rhamnose K03534 - 5.1.3.32 0.00000000000000000000000000000000000000004432 160.0
YYD1_k127_5540472_0 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 359.0
YYD1_k127_5540472_1 ADP-glyceromanno-heptose 6-epimerase activity K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 321.0
YYD1_k127_5540472_2 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005479 259.0
YYD1_k127_5540472_3 O-acyltransferase activity K00633 - 2.3.1.18 0.0000000000000000000000000000000000000000000000000000000000000000003179 236.0
YYD1_k127_5540472_4 lysyltransferase activity K07027 - - 0.000000000000000000000000000007377 132.0
YYD1_k127_5540472_5 Methyltransferase domain - - - 0.0000000000000000000002134 110.0
YYD1_k127_5540472_6 6-phosphogluconolactonase activity - - - 0.00001378 57.0
YYD1_k127_5542563_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 520.0
YYD1_k127_5542563_1 serine threonine protein kinase K08884,K12132 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016151,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0032501,GO:0036211,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046777,GO:0046872,GO:0046914,GO:0048871,GO:0050897,GO:0065007,GO:0065008,GO:0071704,GO:0097009,GO:0140096,GO:1901564 2.7.11.1 0.00000000000000000000000000000000000000000000000000001309 209.0
YYD1_k127_5542563_2 Zinc carboxypeptidase K01278 - 3.4.14.5 0.000000001897 60.0
YYD1_k127_5546431_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 2.647e-214 678.0
YYD1_k127_5546431_1 cell wall glycoprotein biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 606.0
YYD1_k127_5546431_2 converts alpha-aldose to the beta-anomer - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 454.0
YYD1_k127_5546431_3 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009939 387.0
YYD1_k127_5546431_4 Xylose isomerase domain protein TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009134 280.0
YYD1_k127_5546431_5 pyrroloquinoline quinone binding K01206 - 3.2.1.51 0.0000000000000000000000000000000000000000000000000000000000001755 226.0
YYD1_k127_5546431_6 PFAM Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000647 166.0
YYD1_k127_5555456_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 317.0
YYD1_k127_5555456_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001453 267.0
YYD1_k127_5555456_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000473 218.0
YYD1_k127_5555456_3 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000001819 205.0
YYD1_k127_5555456_4 oxidoreductase activity - - - 0.0000000000000000000001195 115.0
YYD1_k127_5555456_5 - - - - 0.000000000000000000001331 111.0
YYD1_k127_5555456_6 Sigma-70, region 4 K03088 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0043254,GO:0044087,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.0000000000007126 79.0
YYD1_k127_5559771_0 Tryptophanyl-tRNA synthetase K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 380.0
YYD1_k127_5559771_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005342 377.0
YYD1_k127_5559771_2 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000569 259.0
YYD1_k127_5559771_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000001186 214.0
YYD1_k127_5559771_4 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K13799 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25,6.3.2.1 0.000000000000000000000000000000000000000000000000000009214 198.0
YYD1_k127_5559771_5 Peptidase family M50 K06402 - - 0.0000000000000000000000000000000000000000000000002286 183.0
YYD1_k127_5559771_6 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000199 149.0
YYD1_k127_5559771_7 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0016020,GO:0030312,GO:0032991,GO:0033554,GO:0040007,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0071944,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.000000000000000002783 86.0
YYD1_k127_5559771_8 beta-propeller repeat - - - 0.000000002251 59.0
YYD1_k127_5596651_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 549.0
YYD1_k127_5596651_1 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000001121 234.0
YYD1_k127_5596651_2 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000005794 156.0
YYD1_k127_5596651_3 SnoaL-like domain - - - 0.0000000000000000000000000000000003524 135.0
YYD1_k127_5596651_4 HxlR-like helix-turn-helix - - - 0.0000000000000000000000002714 107.0
YYD1_k127_5596651_5 cAMP biosynthetic process - - - 0.0000000000000000000000003438 111.0
YYD1_k127_5612256_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005571 576.0
YYD1_k127_5612256_1 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 571.0
YYD1_k127_5612256_11 Prokaryotic N-terminal methylation motif - - - 0.000000004386 69.0
YYD1_k127_5612256_12 heat shock protein binding - - - 0.00000008729 63.0
YYD1_k127_5612256_2 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 534.0
YYD1_k127_5612256_3 ADP-ribosylglycohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 400.0
YYD1_k127_5612256_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 392.0
YYD1_k127_5612256_5 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001093 256.0
YYD1_k127_5612256_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000139 226.0
YYD1_k127_5612256_7 - - - - 0.0000000000000000000000000000000000000000000000001463 188.0
YYD1_k127_5612256_8 WYL domain - - - 0.00000000000000000000000000000000000000002225 166.0
YYD1_k127_5612256_9 Pyridoxamine 5'-phosphate oxidase K07226 - - 0.00000000000000006612 86.0
YYD1_k127_5674933_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 432.0
YYD1_k127_5674933_1 Belongs to the peptidase M50B family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007313 251.0
YYD1_k127_5674933_3 Peptidase MA superfamily - - - 0.0000000000000000000000000000001503 137.0
YYD1_k127_5674933_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000006103 106.0
YYD1_k127_5674933_5 Belongs to the peptidase M50B family - - - 0.0000000003443 71.0
YYD1_k127_5753145_0 Carbamoyltransferase C-terminus K00612 - - 1.575e-289 906.0
YYD1_k127_5753145_1 TIGRFAM VWFA-related Acidobacterial domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006842 522.0
YYD1_k127_5753145_2 ABC transporter K09689 - 3.6.3.38 0.000000000000000000000000000000000000000000000000000000000000000000003896 258.0
YYD1_k127_5753145_3 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000001087 225.0
YYD1_k127_5753145_4 PFAM ABC-2 type transporter K01992,K09690 - - 0.00000000000000000000000000000000000000000001606 178.0
YYD1_k127_5768588_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 384.0
YYD1_k127_5768588_1 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000003854 204.0
YYD1_k127_5768588_2 bacterial (prokaryotic) histone like domain K03530 - - 0.000000000000000000000000000001248 123.0
YYD1_k127_5768588_3 Regulatory protein - - - 0.00000000000000000408 94.0
YYD1_k127_5777047_0 Dienelactone hydrolase family - - - 5.33e-244 778.0
YYD1_k127_5777047_1 response to heat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000356 293.0
YYD1_k127_5777047_2 tRNA pseudouridine synthase activity K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006602 280.0
YYD1_k127_5777047_3 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000003126 273.0
YYD1_k127_5777047_4 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000001482 205.0
YYD1_k127_5777047_5 Redoxin K03564 - 1.11.1.15 0.00000000000000000000000000008768 118.0
YYD1_k127_5777047_6 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000002571 67.0
YYD1_k127_5777047_7 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000001261 64.0
YYD1_k127_5782246_0 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006121 409.0
YYD1_k127_5782246_1 3-oxoacyl-[acyl-carrier-protein] synthase activity K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 390.0
YYD1_k127_5782246_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 329.0
YYD1_k127_5782246_3 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009247 290.0
YYD1_k127_5782246_4 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000000000000000000005026 205.0
YYD1_k127_5782246_5 Aerotolerance regulator N-terminal - - - 0.000000000000000000000000000000000000000000000007122 193.0
YYD1_k127_5782246_6 Domain of unknown function (DUF4159) - - - 0.000000000000000000000000000000000000000000003097 179.0
YYD1_k127_5782246_7 geranylgeranyl reductase activity K21401 - 1.3.99.38 0.000000000000000000000000000000000000000009762 168.0
YYD1_k127_5782246_8 methyltransferase activity K21310 - 2.1.1.334 0.000000000000000000000000000000006948 137.0
YYD1_k127_5782246_9 Isoprenylcysteine carboxyl methyltransferase K16168 - - 0.00000000000000000000002225 106.0
YYD1_k127_5788845_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 491.0
YYD1_k127_5788845_1 tRNA (Guanine-1)-methyltransferase K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001558 286.0
YYD1_k127_5788845_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000005887 183.0
YYD1_k127_5788845_3 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000001505 181.0
YYD1_k127_5788845_4 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000002472 144.0
YYD1_k127_5788845_5 Tetratricopeptide repeat - - - 0.00000000000000000000000005071 124.0
YYD1_k127_5788845_6 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000001549 110.0
YYD1_k127_5788845_7 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate - - - 0.000000000000000001351 86.0
YYD1_k127_5788845_8 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000004216 87.0
YYD1_k127_5788845_9 Belongs to the UPF0109 family K06960 - - 0.000000000000000007384 90.0
YYD1_k127_5794224_0 radical SAM domain protein - - - 3.501e-214 679.0
YYD1_k127_5794224_1 Bacterial protein of unknown function (DUF853) K06915 - - 4.794e-196 627.0
YYD1_k127_5794224_10 electron transfer activity K02305,K08738 - - 0.00000002073 68.0
YYD1_k127_5794224_2 imidazolonepropionase activity K00466 - 1.13.12.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 581.0
YYD1_k127_5794224_3 H( )-stimulated, divalent metal cation uptake system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 443.0
YYD1_k127_5794224_4 Probably functions as a manganese efflux pump - - - 0.00000000000000000000000000000000000000000000002553 192.0
YYD1_k127_5794224_5 Probably functions as a manganese efflux pump - - - 0.00000000000000000000000000000003371 145.0
YYD1_k127_5794224_6 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000003 127.0
YYD1_k127_5794224_7 Protein of unknown function (DUF2585) - - - 0.0000000000000000000000000006677 115.0
YYD1_k127_5794224_8 - - - - 0.000000000000000000000001409 120.0
YYD1_k127_5794224_9 cheY-homologous receiver domain - - - 0.000000000000005147 77.0
YYD1_k127_5798786_0 Carboxypeptidase regulatory-like domain - - - 5.246e-296 938.0
YYD1_k127_5798786_1 Neutral/alkaline non-lysosomal ceramidase, N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 370.0
YYD1_k127_5798786_2 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000003332 228.0
YYD1_k127_5798786_3 PIN domain - - - 0.000000000000000000000000000000000002046 145.0
YYD1_k127_5798786_4 positive regulation of growth - - - 0.0000000000000000000008823 96.0
YYD1_k127_5798786_5 lactate/malate dehydrogenase, NAD binding domain K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0030060,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.0000000000000002214 89.0
YYD1_k127_5798786_6 MacB-like periplasmic core domain - - - 0.00003745 46.0
YYD1_k127_5804863_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009233 482.0
YYD1_k127_5804863_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 404.0
YYD1_k127_5804863_10 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0000000000000000000000000000000000000000001372 167.0
YYD1_k127_5804863_11 PFAM Integral membrane protein DUF92 - GO:0005575,GO:0016020 - 0.000000000000000000000000000000004913 147.0
YYD1_k127_5804863_12 Homogentisate phytyltransferase 2 K12501 - 2.5.1.117 0.0000000000000000004078 99.0
YYD1_k127_5804863_13 Phosphoserine phosphatase - - - 0.0000000000002795 83.0
YYD1_k127_5804863_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 345.0
YYD1_k127_5804863_3 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K02549 - 4.2.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 327.0
YYD1_k127_5804863_4 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002084 289.0
YYD1_k127_5804863_5 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002248 286.0
YYD1_k127_5804863_6 Polysaccharide biosynthesis protein K15856 - 1.1.1.281 0.0000000000000000000000000000000000000000000000000000000000000000000538 242.0
YYD1_k127_5804863_7 Deoxynucleoside kinase K15518 - 2.7.1.113 0.00000000000000000000000000000000000000000000000000000000002304 212.0
YYD1_k127_5804863_8 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000005832 196.0
YYD1_k127_5804863_9 PFAM Organic solvent tolerance protein K04744 - - 0.000000000000000000000000000000000000000000000000000006806 214.0
YYD1_k127_5806239_0 Proton-conducting membrane transporter K12137,K15828 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004004 544.0
YYD1_k127_5806239_1 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 497.0
YYD1_k127_5806239_10 Hydrogenase 4 membrane K12140 GO:0008150,GO:0040007 - 0.000000000000000000000000000000000000002297 154.0
YYD1_k127_5806239_11 ArsR family transcriptional regulator - - - 0.0000000000000000000000000000007996 124.0
YYD1_k127_5806239_12 Homoaconitate hydratase family protein K01703,K17749 - 4.2.1.33,4.2.1.35 0.00000000000000008201 94.0
YYD1_k127_5806239_13 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0005702 50.0
YYD1_k127_5806239_2 NADH dehydrogenase (ubiquinone) activity K14089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004251 494.0
YYD1_k127_5806239_3 Peptidase M64 N-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008098 417.0
YYD1_k127_5806239_4 Proton-conducting membrane transporter K12141 GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0033554,GO:0044425,GO:0044464,GO:0050896,GO:0051716,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 377.0
YYD1_k127_5806239_5 NADH dehydrogenase K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 319.0
YYD1_k127_5806239_6 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000003638 247.0
YYD1_k127_5806239_7 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000007471 222.0
YYD1_k127_5806239_8 Ferredoxin K04755 - - 0.00000000000000000000000000000000000000000000000007444 182.0
YYD1_k127_5806239_9 ApaG domain K06195 - - 0.000000000000000000000000000000000000000004696 173.0
YYD1_k127_5808996_0 Glycosyl hydrolase family 3 C-terminal domain K05349 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 562.0
YYD1_k127_5808996_1 AraC-type transcriptional regulator N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004313 386.0
YYD1_k127_5808996_2 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.000000006614 59.0
YYD1_k127_5809467_0 Major Facilitator Superfamily K02445,K07783 - - 2.244e-224 703.0
YYD1_k127_5809467_1 glycerophosphodiester phosphodiesterase activity K01126 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008081,GO:0008889,GO:0009279,GO:0016020,GO:0016787,GO:0016788,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044462,GO:0044464,GO:0046872,GO:0071944 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000000008904 254.0
YYD1_k127_5809467_2 TIGRFAM geranylgeranyl reductase - - - 0.00000000000000000000000000000000000000000000005899 184.0
YYD1_k127_5809467_3 FGGY family of carbohydrate kinases, C-terminal domain - - - 0.00000000000000000000000000000000005654 138.0
YYD1_k127_5809467_4 TIGRFAM TonB family protein K03832 - - 0.00000000000000000000000008765 119.0
YYD1_k127_5809467_5 membrane protein of uknown function UCP014873 - - - 0.00004383 55.0
YYD1_k127_5816249_0 response regulator K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004411 432.0
YYD1_k127_5816249_1 Dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 311.0
YYD1_k127_5816249_2 histidine kinase A domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 302.0
YYD1_k127_5816249_3 SMART Transcription regulator, AsnC-type K03718,K03719 - - 0.00000000000000000000000000000000000000003452 160.0
YYD1_k127_5816249_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K02405 - - 0.000000000000000000000000000000000002013 149.0
YYD1_k127_5816249_5 Protein of unknown function with PCYCGC motif - - - 0.000000002905 64.0
YYD1_k127_5816249_6 Protein of unknown function with PCYCGC motif - - - 0.0002065 44.0
YYD1_k127_5821686_0 Tricorn protease C1 domain K08676 - - 0.0 1080.0
YYD1_k127_5821686_1 transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 391.0
YYD1_k127_5821686_2 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000005778 50.0
YYD1_k127_5821986_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 2.771e-260 826.0
YYD1_k127_5821986_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 2.184e-241 773.0
YYD1_k127_5821986_2 DHH family K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000001414 235.0
YYD1_k127_5821986_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000001995 229.0
YYD1_k127_5821986_4 Peptidase M48 K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000003134 220.0
YYD1_k127_5821986_5 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000008132 138.0
YYD1_k127_5821986_6 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000001276 107.0
YYD1_k127_5821986_7 Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide K00376 - 1.7.2.4 0.0002417 50.0
YYD1_k127_582455_0 leucyl-tRNA aminoacylation K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 5.389e-316 992.0
YYD1_k127_582455_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 4.498e-254 811.0
YYD1_k127_582455_10 Electron transfer flavoprotein domain K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007371 288.0
YYD1_k127_582455_11 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006573 286.0
YYD1_k127_582455_12 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000002499 264.0
YYD1_k127_582455_13 PFAM Transglycosylase SLT domain K08309 - - 0.000000000000000000000000000000000000002586 155.0
YYD1_k127_582455_14 Domain of unknown function (DUF374) K09778 - - 0.000000000000000000000000000000000004675 145.0
YYD1_k127_582455_15 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000000000142 123.0
YYD1_k127_582455_16 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000001874 112.0
YYD1_k127_582455_17 Ribosomal L32p protein family K02911 - - 0.0000000000000000000151 92.0
YYD1_k127_582455_18 regulation of DNA repair K03565 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000001121 94.0
YYD1_k127_582455_19 Evidence 5 No homology to any previously reported sequences K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.000000000000003178 87.0
YYD1_k127_582455_2 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 2.159e-198 632.0
YYD1_k127_582455_20 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000003338 76.0
YYD1_k127_582455_21 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit S4 paralog K04762 - - 0.0000000000005699 74.0
YYD1_k127_582455_22 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000002505 76.0
YYD1_k127_582455_23 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0003718 44.0
YYD1_k127_582455_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 611.0
YYD1_k127_582455_4 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005055 482.0
YYD1_k127_582455_5 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000643 413.0
YYD1_k127_582455_6 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005437 344.0
YYD1_k127_582455_7 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 331.0
YYD1_k127_582455_8 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 309.0
YYD1_k127_582455_9 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 309.0
YYD1_k127_5827088_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 482.0
YYD1_k127_5827088_1 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004254 394.0
YYD1_k127_5827088_2 ArgK protein K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 322.0
YYD1_k127_5827088_3 PFAM PfkB domain protein K00856 - 2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 312.0
YYD1_k127_5827088_4 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003427 295.0
YYD1_k127_5827088_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002334 286.0
YYD1_k127_5827088_6 IstB-like ATP binding protein K02315 - - 0.0000000000000000000000000000000000000000000000000000001355 205.0
YYD1_k127_5827088_7 Transcriptional regulator, MerR family K13640 GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000001503 157.0
YYD1_k127_5827088_8 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000000001276 151.0
YYD1_k127_5827088_9 Heat shock 70 kDa protein K04043 - - 0.00000003856 59.0
YYD1_k127_5836334_0 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004907 442.0
YYD1_k127_5836334_1 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000004253 239.0
YYD1_k127_5836334_2 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000008753 145.0
YYD1_k127_5836334_3 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000002413 136.0
YYD1_k127_5836334_4 L11 methyltransferase K02687 - - 0.00000001594 59.0
YYD1_k127_5836334_5 Transporter, CPA2 family - - - 0.00000005213 65.0
YYD1_k127_5836334_6 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000001286 64.0
YYD1_k127_5841736_0 Sodium:solute symporter family - - - 1.211e-199 656.0
YYD1_k127_5841736_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 432.0
YYD1_k127_5841736_2 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000003006 244.0
YYD1_k127_5841736_3 general secretion pathway protein K02456,K02650 - - 0.000000000000000117 93.0
YYD1_k127_5841736_4 COG3291 FOG PKD repeat - - - 0.000000431 62.0
YYD1_k127_5841736_5 PFAM Uncharacterised BCR, COG1649 - - - 0.0003037 48.0
YYD1_k127_5850733_0 MacB-like periplasmic core domain - - - 3.586e-300 945.0
YYD1_k127_5850733_1 Transport of potassium into the cell K03549 - - 8.9e-228 721.0
YYD1_k127_5850733_2 TonB-dependent Receptor Plug Domain K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008854 593.0
YYD1_k127_5850733_3 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000003517 238.0
YYD1_k127_5850733_4 lipase activity K15349 - - 0.00000000004947 77.0
YYD1_k127_5856995_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - 5.426e-301 948.0
YYD1_k127_5856995_1 proline dipeptidase activity K01271 - 3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006283 482.0
YYD1_k127_5856995_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 451.0
YYD1_k127_5856995_3 Belongs to the glycosyl hydrolase 31 family K01187,K01811 - 3.2.1.177,3.2.1.20 0.000000003417 68.0
YYD1_k127_5856995_4 Transcriptional regulator, LacI family K02529 - - 0.0003341 44.0
YYD1_k127_5864243_0 ADP-ribosylglycohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003771 628.0
YYD1_k127_5864243_1 ABC-type sugar transport system, ATPase component K10441 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 500.0
YYD1_k127_5864243_2 Periplasmic binding protein domain K10439 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004578 355.0
YYD1_k127_5864243_3 ribosylpyrimidine nucleosidase activity K01250 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 360.0
YYD1_k127_5864243_4 Belongs to the binding-protein-dependent transport system permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005235 341.0
YYD1_k127_5864243_5 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006036 282.0
YYD1_k127_5864243_6 Dna alkylation repair - - - 0.000000000000000000000000000002275 136.0
YYD1_k127_5864243_7 Domain of unknown function (DUF4115) K15539 - - 0.000002396 59.0
YYD1_k127_5864243_8 Carboxypeptidase regulatory-like domain - - - 0.00004849 48.0
YYD1_k127_5870373_0 Carboxypeptidase regulatory-like domain - - - 1.245e-209 687.0
YYD1_k127_5870373_1 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 614.0
YYD1_k127_5870373_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 523.0
YYD1_k127_5870373_3 Carbon-nitrogen hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004972 416.0
YYD1_k127_5870373_4 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000009488 188.0
YYD1_k127_5870373_5 Nitrous oxide-stimulated promoter - - - 0.00000000000000000000000000000000006097 136.0
YYD1_k127_5870373_6 - - - - 0.00000000000000000000000003505 115.0
YYD1_k127_5870373_7 Vault protein inter-alpha-trypsin domain - GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0070013 - 0.00000000000002303 83.0
YYD1_k127_590322_0 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 309.0
YYD1_k127_590322_1 long-chain fatty acid transporting porin activity K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000002522 247.0
YYD1_k127_590322_2 long-chain fatty acid transporting porin activity K06076 - - 0.000000000000000000000000000000000000000000000000000000001683 216.0
YYD1_k127_590322_3 electron transport chain - - - 0.00000000000000000000000000000000000000000000000004024 199.0
YYD1_k127_590322_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000003759 95.0
YYD1_k127_590322_5 lipase activity K15349 - - 0.0000003679 61.0
YYD1_k127_5903485_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 2.227e-271 848.0
YYD1_k127_5903485_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 422.0
YYD1_k127_5903485_2 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 309.0
YYD1_k127_5903485_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000004233 132.0
YYD1_k127_5910027_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 392.0
YYD1_k127_5910027_1 6-phosphogluconate dehydrogenase, NAD-binding K00020,K00042 - 1.1.1.31,1.1.1.60 0.00000000000000000000000000000000000000000000000000000001322 203.0
YYD1_k127_591212_0 homoserine kinase activity K02204 - 2.7.1.39 1.23e-274 853.0
YYD1_k127_591212_1 Amylo-alpha-1,6-glucosidase - - - 6.289e-241 761.0
YYD1_k127_591212_2 Pyridine nucleotide-disulphide oxidoreductase K03885,K10716 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 554.0
YYD1_k127_591212_3 cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 299.0
YYD1_k127_591212_4 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K10914 GO:0000166,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0017076,GO:0019219,GO:0019222,GO:0030551,GO:0030552,GO:0030554,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032553,GO:0032555,GO:0032559,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0046983,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.0000000000000000000000000001172 126.0
YYD1_k127_5932859_0 Beta-L-arabinofuranosidase, GH127 K09955 - - 0.0 1077.0
YYD1_k127_5932859_1 Beta-L-arabinofuranosidase, GH127 K09955 - - 6.711e-209 680.0
YYD1_k127_5932859_2 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001157 292.0
YYD1_k127_5932859_3 Transcriptional regulator K07979 - - 0.00000000000000000000000000000000000001038 149.0
YYD1_k127_5932859_4 esterase - - - 0.0000000001217 63.0
YYD1_k127_5939813_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 442.0
YYD1_k127_5939813_1 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 435.0
YYD1_k127_5939813_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 325.0
YYD1_k127_5939813_3 Ion transport 2 domain protein K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006877 299.0
YYD1_k127_5939813_4 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0000166,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0004140,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019103,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032551,GO:0032552,GO:0032553,GO:0032554,GO:0032557,GO:0032558,GO:0032564,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000000007428 155.0
YYD1_k127_5953623_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 631.0
YYD1_k127_5953623_1 aminopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 475.0
YYD1_k127_5953623_2 Alginate export - - - 0.0000000000000000000000000000000000000000000000000000000000000001537 237.0
YYD1_k127_5953623_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000004791 198.0
YYD1_k127_5966662_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006676 612.0
YYD1_k127_5966662_1 Zinc carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000006766 179.0
YYD1_k127_5966662_3 RES - - - 0.0000000000000005819 88.0
YYD1_k127_5977746_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0 1105.0
YYD1_k127_5977746_1 Cytochrome c554 and c-prime - - - 0.00000000000000000000000004405 116.0
YYD1_k127_5977746_2 Hemolysin-type calcium-binding repeat (2 copies) - - - 0.0000000000000000004564 90.0
YYD1_k127_6042914_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 313.0
YYD1_k127_6042914_1 Histidine kinase HAMP K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003749 295.0
YYD1_k127_6042914_2 Belongs to the NiFe NiFeSe hydrogenase large subunit family K14126,K17993 GO:0003674,GO:0005488,GO:0005575,GO:0016151,GO:0032991,GO:0043167,GO:0043169,GO:0044569,GO:0046872,GO:0046914,GO:1902494 1.12.1.3,1.12.1.5,1.8.98.5 0.000000000000000000000000000000000000000000000000000002547 198.0
YYD1_k127_6042914_3 Hydrogenase maturation protease K00442 - - 0.0002535 50.0
YYD1_k127_6065226_0 response regulator K13599 - - 0.0000000000000000000000000000000000000000000000000000000002107 220.0
YYD1_k127_6065226_1 repeat protein - - - 0.00000002896 62.0
YYD1_k127_6070098_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 567.0
YYD1_k127_6070098_1 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 327.0
YYD1_k127_6070098_2 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 301.0
YYD1_k127_6070098_3 von Willebrand factor (vWF) type A domain K07114 - - 0.0000000000000000000000000000000000000000137 166.0
YYD1_k127_6070098_4 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.00000000000000000000000000000000000000007945 155.0
YYD1_k127_6070098_5 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000803 143.0
YYD1_k127_6070098_6 PFAM PfkB domain protein K00856 - 2.7.1.20 0.000000000000000000000000003378 113.0
YYD1_k127_6070098_7 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000004279 116.0
YYD1_k127_6070098_8 - - - - 0.00000000000000000001608 100.0
YYD1_k127_6070098_9 Predicted membrane protein (DUF2085) - - - 0.00001474 53.0
YYD1_k127_6082994_0 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 563.0
YYD1_k127_6082994_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 441.0
YYD1_k127_6082994_2 BNR repeat-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005199 392.0
YYD1_k127_6091455_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 1.031e-252 805.0
YYD1_k127_6091455_1 WD40 domain protein beta Propeller K12132 - 2.7.11.1 1.765e-196 643.0
YYD1_k127_6091455_10 HEAT repeat - - - 0.0000000001146 74.0
YYD1_k127_6091455_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 477.0
YYD1_k127_6091455_3 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001261 288.0
YYD1_k127_6091455_4 Thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000001253 232.0
YYD1_k127_6091455_5 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000005777 216.0
YYD1_k127_6091455_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000002715 192.0
YYD1_k127_6091455_7 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000000008797 184.0
YYD1_k127_6091455_8 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000003485 100.0
YYD1_k127_6091455_9 STAS domain K04749 - - 0.00000000000000001334 87.0
YYD1_k127_6113676_0 Tricorn protease homolog - - - 0.0 1424.0
YYD1_k127_6113676_1 Peptidase family S58 K01266 - 3.4.11.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007177 471.0
YYD1_k127_6113676_2 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000004688 225.0
YYD1_k127_6113676_3 PFAM RNP-1 like RNA-binding protein - - - 0.000000000000000000000000004718 115.0
YYD1_k127_6113676_4 hyperosmotic response - - - 0.0000000005537 70.0
YYD1_k127_6113676_5 peptidyl-tyrosine sulfation - - - 0.00003943 55.0
YYD1_k127_6113676_6 Type VI secretion system VasI, EvfG, VC_A0118 K11909 - - 0.00005092 53.0
YYD1_k127_6122319_0 Peptidase family M1 domain K01256 - 3.4.11.2 4.767e-240 769.0
YYD1_k127_6122319_1 Aminotransferase K14267,K14287 - 2.6.1.17,2.6.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 511.0
YYD1_k127_6122319_2 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 323.0
YYD1_k127_6122319_3 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002132 288.0
YYD1_k127_6122319_4 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003852 277.0
YYD1_k127_6122319_5 PFAM Asparaginase K01424 - 3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000004493 232.0
YYD1_k127_6122319_6 Cupin 2, conserved barrel domain protein K16953,K19547 - 4.4.1.3,5.3.3.19 0.000000000000000000000000001769 118.0
YYD1_k127_6122319_7 phosphatidylinositol metabolic process K00728 - 2.4.1.109 0.000000000002673 76.0
YYD1_k127_6131381_0 Protein kinase domain K12132 - 2.7.11.1 1.595e-236 764.0
YYD1_k127_6131381_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 2.574e-214 672.0
YYD1_k127_6131381_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 342.0
YYD1_k127_6131381_3 PFAM RNA binding S1 domain protein K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001442 275.0
YYD1_k127_6131381_4 Belongs to the peptidase S8 family K12287 - - 0.000000000000000000000000000000000000000000000000000004904 214.0
YYD1_k127_6131381_5 Subtilase family - - - 0.0000000000000000000000000000000000000000000000007528 198.0
YYD1_k127_6149988_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 8.074e-284 905.0
YYD1_k127_6149988_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000755 391.0
YYD1_k127_6149988_2 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007273 303.0
YYD1_k127_6149988_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002679 295.0
YYD1_k127_6149988_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000007942 179.0
YYD1_k127_6149988_5 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.00000000000000000000000000004102 122.0
YYD1_k127_6149988_6 - - - - 0.00004811 53.0
YYD1_k127_6162816_0 arylsulfatase activity - - - 6.176e-239 757.0
YYD1_k127_6162816_1 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 5.004e-207 659.0
YYD1_k127_6162816_2 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 546.0
YYD1_k127_6162816_3 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000007836 188.0
YYD1_k127_6162816_5 nitrite reductase [NAD(P)H] activity K08355 - 1.20.2.1,1.20.9.1 0.000000002027 61.0
YYD1_k127_6181504_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 1.665e-203 653.0
YYD1_k127_6181504_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005679 559.0
YYD1_k127_6181504_2 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 539.0
YYD1_k127_6181504_3 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 345.0
YYD1_k127_6181504_4 Domain present in PSD-95, Dlg, and ZO-1/2. K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004718 310.0
YYD1_k127_6181504_5 Sodium:sulfate symporter transmembrane region K03319,K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005974 282.0
YYD1_k127_6181504_6 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004318 282.0
YYD1_k127_6181504_7 Hydrolase, TatD family K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000001419 234.0
YYD1_k127_6181504_8 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000009073 199.0
YYD1_k127_6181504_9 C-terminal domain of histone - - - 0.0000000000000000000000000000000000000000001083 171.0
YYD1_k127_619865_0 Glycine D-amino acid oxidase (deaminating) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004833 575.0
YYD1_k127_619865_1 Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 433.0
YYD1_k127_619865_2 Peptidase family M48 - - - 0.0000000000000000000000000000000000000001997 169.0
YYD1_k127_619865_3 Belongs to the UPF0761 family K07058 - - 0.000000000000000000000006404 112.0
YYD1_k127_620744_0 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 495.0
YYD1_k127_620744_1 Beta-Casp domain K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002437 279.0
YYD1_k127_620744_2 Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source K01505 - 3.5.99.7 0.000000000000000000000000000000000000000000000000000000000000000000000001178 268.0
YYD1_k127_620744_3 Aminotransferase K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000006406 258.0
YYD1_k127_620744_4 Short-chain dehydrogenase reductase SDR K03793 - 1.5.1.33 0.000000000000000000000000000000000000000000981 167.0
YYD1_k127_620744_5 DoxX K15977 - - 0.000000000000000000000000000008787 126.0
YYD1_k127_6216080_0 PFAM Type II secretion system protein E K02652 - - 6.061e-225 711.0
YYD1_k127_6216080_1 TIGRFAM acetaldehyde dehydrogenase (acetylating) K00132 - 1.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 507.0
YYD1_k127_6216080_10 - - - - 0.00003883 53.0
YYD1_k127_6216080_2 Lysin motif K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 324.0
YYD1_k127_6216080_3 PFAM Type II secretion system F domain K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007601 301.0
YYD1_k127_6216080_4 PFAM microcompartments protein K04027 - - 0.00000000000000000000000000000000000000876 147.0
YYD1_k127_6216080_5 PFAM Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000000008618 142.0
YYD1_k127_6216080_6 type II and III secretion system protein K02453 - - 0.0000000000000000000000002399 117.0
YYD1_k127_6216080_7 Pilus assembly protein K02662 - - 0.000000000000868 80.0
YYD1_k127_6216080_8 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000006345 65.0
YYD1_k127_6216080_9 PFAM Fimbrial assembly family protein K02663 - - 0.000002517 60.0
YYD1_k127_6260056_0 ABC transporter K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000001982 228.0
YYD1_k127_6260056_1 - - - - 0.00000000000000000001011 103.0
YYD1_k127_6260056_2 - - - - 0.0000000000000000004014 92.0
YYD1_k127_6260056_3 RNA recognition motif - - - 0.000000000000000003827 94.0
YYD1_k127_6260056_4 Endonuclease/Exonuclease/phosphatase family - - - 0.0000219 56.0
YYD1_k127_6264666_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 324.0
YYD1_k127_6264666_1 Domain of unknown function DUF1828 - - - 0.0000000000000000000000000000000000000000004886 161.0
YYD1_k127_6264666_2 Peptidase family M48 - - - 0.00000000000000000000000000000001018 134.0
YYD1_k127_6264666_3 Domain of unknown function DUF1828 - - - 0.000000003482 64.0
YYD1_k127_6273560_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 4.816e-225 727.0
YYD1_k127_6273560_1 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004066 248.0
YYD1_k127_6273560_2 Domain of unknown function (DUF892) - - - 0.00000000000000000000000000000000000000000000000001472 184.0
YYD1_k127_6273560_3 Male sterility protein K15891 - 1.1.1.354 0.00000000000000000000000000000000000000000145 163.0
YYD1_k127_6273560_4 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000415 163.0
YYD1_k127_6273560_5 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000001334 136.0
YYD1_k127_6273560_6 IgA Peptidase M64 - - - 0.00000000000000000001099 92.0
YYD1_k127_6273560_7 Male sterility protein K00091 - 1.1.1.219 0.0000007376 54.0
YYD1_k127_6294105_0 Carboxypeptidase regulatory-like domain - - - 5.508e-197 653.0
YYD1_k127_6294105_1 alcohol dehydrogenase K00008 - 1.1.1.14 0.0000000000000000000000000000000000000000000000000009317 189.0
YYD1_k127_6294105_2 N-acetylgalactosamine-6-sulfatase K01132,K12381 GO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0003943,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0006022,GO:0006026,GO:0006027,GO:0006082,GO:0006790,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008150,GO:0008152,GO:0008484,GO:0009056,GO:0009057,GO:0009987,GO:0012505,GO:0016192,GO:0016787,GO:0016788,GO:0030141,GO:0030203,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032940,GO:0034774,GO:0035578,GO:0036230,GO:0042119,GO:0042339,GO:0042340,GO:0042582,GO:0043170,GO:0043202,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043436,GO:0043890,GO:0044237,GO:0044248,GO:0044273,GO:0044281,GO:0044422,GO:0044424,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0060205,GO:0070013,GO:0071704,GO:0097708,GO:0099503,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903510 3.1.6.4 0.000000000000000000000000001098 127.0
YYD1_k127_630025_0 Pfam:CPSase_L_chain K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 485.0
YYD1_k127_630025_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000003071 140.0
YYD1_k127_630025_2 Biotin-requiring enzyme - - - 0.0000000000000000000000932 108.0
YYD1_k127_630025_3 - - - - 0.00004127 47.0
YYD1_k127_6317722_0 ATP-dependent Clp protease, ATP-binding subunit ClpA K03694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007631 284.0
YYD1_k127_6317722_1 Penicillin amidase K07116 - 3.5.1.97 0.0000000000000000000000000000000000000000000000000003736 195.0
YYD1_k127_6317722_2 2OG-Fe(II) oxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000007027 181.0
YYD1_k127_6317722_3 rRNA methyltransferase - - - 0.0000000000000000000000000000000000000000000000302 185.0
YYD1_k127_6317722_4 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000001005 105.0
YYD1_k127_6317722_5 Protein conserved in bacteria - - - 0.0000000000000002973 90.0
YYD1_k127_6317722_6 TIGRFAM regulatory protein, FmdB - - - 0.00000004684 57.0
YYD1_k127_6317722_7 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.0001423 54.0
YYD1_k127_6339118_0 thiamine diphosphate biosynthetic process K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 373.0
YYD1_k127_6339118_1 Methionine biosynthesis protein MetW K18827 - 2.1.1.294,2.7.1.181 0.00000000000000000000000000000000000000000000000000032 209.0
YYD1_k127_6339118_2 With ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate K03154 - - 0.000000000000004102 78.0
YYD1_k127_6356490_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 3.5e-293 915.0
YYD1_k127_6356490_1 PFAM phosphoesterase, RecJ domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002627 286.0
YYD1_k127_6356490_2 Cys/Met metabolism PLP-dependent enzyme K01739,K01760,K01761 - 2.5.1.48,4.4.1.11,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000312 254.0
YYD1_k127_6356490_3 Belongs to the MlaE permease family K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003904 252.0
YYD1_k127_6356490_4 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000009403 243.0
YYD1_k127_6356490_5 PFAM von Willebrand factor type A - - - 0.0000000000000000000000000000000000004997 151.0
YYD1_k127_6356490_7 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.0000000000000000000000000000000004479 144.0
YYD1_k127_6356490_8 gas vesicle protein - - - 0.00007287 49.0
YYD1_k127_6360235_0 Amylo-alpha-1,6-glucosidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 467.0
YYD1_k127_6360235_1 Prolyl oligopeptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 336.0
YYD1_k127_6360235_2 - - - - 0.000000000000000000000000000000000000000000000002955 180.0
YYD1_k127_6360235_3 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000004944 158.0
YYD1_k127_6360235_4 DinB family - - - 0.0000000000000000000000000000000000000001103 156.0
YYD1_k127_6360235_5 - - - - 0.0000000000000000000000000000001359 127.0
YYD1_k127_6360235_6 - - - - 0.0000000098 58.0
YYD1_k127_6380206_0 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 364.0
YYD1_k127_6380206_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 299.0
YYD1_k127_6380206_2 Uncharacterised protein family UPF0066 - - - 0.00000000000000000000000000000000000000000000000000000000000000002057 228.0
YYD1_k127_6380206_3 Dienelactone hydrolase family - - - 0.000000000000000000000000000000000000000000004867 170.0
YYD1_k127_6380206_4 Protein conserved in bacteria - - - 0.0000000000000000000000000000000002515 137.0
YYD1_k127_6383545_0 Belongs to the ClpA ClpB family K03694 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007007 457.0
YYD1_k127_6383545_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004747 423.0
YYD1_k127_6383545_2 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 371.0
YYD1_k127_6383545_3 PFAM ABC transporter related K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 335.0
YYD1_k127_6383545_4 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 306.0
YYD1_k127_6383545_5 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000577 286.0
YYD1_k127_6383545_6 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000005043 119.0
YYD1_k127_6389071_0 Zinc carboxypeptidase - - - 0.0 1147.0
YYD1_k127_6389071_1 UvrD/REP helicase N-terminal domain - - - 1.171e-297 952.0
YYD1_k127_6389071_2 PD-(D/E)XK nuclease superfamily - - - 7.964e-239 778.0
YYD1_k127_6389071_3 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000096 617.0
YYD1_k127_6389071_4 competence protein COMEC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003696 270.0
YYD1_k127_6389071_5 4Fe-4S dicluster domain K05524 - - 0.0000000000000000000000000001643 118.0
YYD1_k127_6389071_6 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.000000000000002414 86.0
YYD1_k127_6389071_7 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547 - - 0.00000000000000824 83.0
YYD1_k127_6389071_8 metallophosphoesterase K07096 - - 0.0005953 46.0
YYD1_k127_6415938_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 9.458e-209 659.0
YYD1_k127_6415938_1 Multi-sensor signal transduction histidine kinase K07710 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000002991 259.0
YYD1_k127_6444474_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007434 479.0
YYD1_k127_6444474_1 PFAM oxidoreductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 469.0
YYD1_k127_6444474_2 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 347.0
YYD1_k127_6444474_3 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000002759 231.0
YYD1_k127_6444474_4 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000001432 149.0
YYD1_k127_6444474_5 PFAM Isoprenylcysteine carboxyl methyltransferase - - - 0.0000000000000000000000000000009881 130.0
YYD1_k127_644477_0 Sortilin, neurotensin receptor 3, - - - 8.228e-304 959.0
YYD1_k127_644477_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 505.0
YYD1_k127_644477_2 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001913 259.0
YYD1_k127_644477_3 Stress responsive A/B Barrel Domain - - - 0.000000000000000000000000000000005707 138.0
YYD1_k127_644477_4 ACT domain - - - 0.0000000000001323 76.0
YYD1_k127_644477_5 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000001637 75.0
YYD1_k127_644477_6 Peptidase family M54 K06974 - - 0.000000003033 66.0
YYD1_k127_644477_7 - - - - 0.000005687 57.0
YYD1_k127_6445945_0 PFAM glycosyl transferase family 51 K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005147 413.0
YYD1_k127_6445945_1 tRNA 3'-trailer cleavage K00784,K01120 - 3.1.26.11,3.1.4.17 0.000000000000000000000000000000000000000000000000000000000000000006745 233.0
YYD1_k127_6445945_3 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000006084 121.0
YYD1_k127_6445945_4 Calcineurin-like phosphoesterase - - - 0.00000000000000000001801 101.0
YYD1_k127_6445945_5 oxidoreductase - - - 0.000000000000000001465 89.0
YYD1_k127_6445945_6 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000006145 90.0
YYD1_k127_6445945_7 phosphatidylcholine synthase activity K01004,K17103 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0050520,GO:0071704,GO:0090407,GO:1901576 2.7.8.24,2.7.8.8 0.00000000001486 68.0
YYD1_k127_6448335_0 phosphoenolpyruvate carboxykinase (ATP) activity K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 7.266e-226 708.0
YYD1_k127_6448335_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006352 578.0
YYD1_k127_6448335_2 Cell division ATP-binding protein ftsE K09811,K09812 GO:0000166,GO:0000287,GO:0000910,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007049,GO:0008144,GO:0008150,GO:0008356,GO:0009898,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019897,GO:0019898,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0030145,GO:0030554,GO:0031234,GO:0032153,GO:0032506,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042173,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043937,GO:0043938,GO:0044085,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0046677,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1902531 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009644 269.0
YYD1_k127_6448335_3 PFAM MOFRL domain protein K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000003563 273.0
YYD1_k127_6448335_4 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811,K09812 GO:0000910,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006928,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0008356,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009966,GO:0009987,GO:0010033,GO:0010646,GO:0016020,GO:0016021,GO:0016043,GO:0019221,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0030312,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0032153,GO:0032506,GO:0034097,GO:0040007,GO:0040011,GO:0042173,GO:0042221,GO:0043207,GO:0043937,GO:0043938,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070098,GO:0070297,GO:0070887,GO:0071310,GO:0071345,GO:0071840,GO:0071944,GO:0071976,GO:0090529,GO:1902531 - 0.000000000000000000000000000000000001388 149.0
YYD1_k127_6450986_0 Fg-gap repeat K18197 - 4.2.2.23 1.23e-243 772.0
YYD1_k127_6450986_1 belongs to the aldehyde dehydrogenase family K22187 - - 9.554e-219 692.0
YYD1_k127_6450986_2 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 525.0
YYD1_k127_6450986_3 Alpha-L-fucosidase K01206 - 3.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 472.0
YYD1_k127_6450986_4 fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004473 305.0
YYD1_k127_6463511_0 Radical SAM - - - 0.0 1090.0
YYD1_k127_6463511_1 Inner membrane protein CreD K06143 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000323 322.0
YYD1_k127_6463511_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K14981 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000006518 234.0
YYD1_k127_6463511_3 Histidine kinase - - - 0.000000000000000000000000000000000008182 154.0
YYD1_k127_6479284_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 367.0
YYD1_k127_6479284_1 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002016 262.0
YYD1_k127_6479284_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000001489 166.0
YYD1_k127_6479284_3 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000002063 150.0
YYD1_k127_6479284_4 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000002703 125.0
YYD1_k127_6479284_5 Thymidylate kinase K00943 GO:0003674,GO:0003824,GO:0004550,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006165,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.000000000000000000000000005512 124.0
YYD1_k127_6479284_6 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.00000000000000000000999 98.0
YYD1_k127_6535029_0 tagaturonate epimerase - - - 2.862e-277 877.0
YYD1_k127_6535029_1 PFAM short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 433.0
YYD1_k127_6535029_2 D-galactarate dehydratase / Altronate hydrolase, C terminus K16850 - 4.2.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006557 330.0
YYD1_k127_6535029_3 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000103 275.0
YYD1_k127_6535029_4 FCD K05799 - - 0.000000000000000000000000000000000000000000000000000000000000003791 224.0
YYD1_k127_6535029_5 PFAM SAF domain K16849 - 4.2.1.7 0.00000000000000002293 94.0
YYD1_k127_6568064_0 Ribosomal protein S1 K02945 - - 5.544e-208 662.0
YYD1_k127_6568064_1 Dehydrogenase K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005102 323.0
YYD1_k127_6568064_2 beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009308 295.0
YYD1_k127_6568064_3 Protein similar to CwfJ C-terminus 1 K19710 - 2.7.7.53 0.00000000000000000000000000000000000000000000000000007834 192.0
YYD1_k127_6568064_4 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.000000000000000000000000000000001702 139.0
YYD1_k127_6568064_5 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.000000000000000000000000985 104.0
YYD1_k127_6568064_6 - - - - 0.0000000000000000000001436 108.0
YYD1_k127_6589293_0 Peptidase family M28 - - - 1.91e-307 978.0
YYD1_k127_6589293_1 InterPro IPR010496 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007925 426.0
YYD1_k127_6589293_2 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000000000006501 203.0
YYD1_k127_6589293_3 Methyltransferase FkbM domain - - - 0.00000000000000001383 94.0
YYD1_k127_661276_0 serine-type peptidase activity K01990,K08884,K12132,K18912 - 1.14.99.50,2.7.11.1 1.202e-257 826.0
YYD1_k127_661276_1 efflux transmembrane transporter activity - - - 2.786e-227 732.0
YYD1_k127_661276_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 295.0
YYD1_k127_661276_3 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000004189 234.0
YYD1_k127_661276_4 - - - - 0.00000000000000000000000001563 115.0
YYD1_k127_6622947_0 4Fe-4S dicluster domain K00184 - - 0.0 1110.0
YYD1_k127_6622947_1 PFAM Chlorite dismutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005093 332.0
YYD1_k127_6622947_2 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005203 317.0
YYD1_k127_6622947_3 Polysulphide reductase K00185 - - 0.00000000000000000000000000000000000000000005097 162.0
YYD1_k127_662430_0 ABC1 family K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 571.0
YYD1_k127_662430_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005707 441.0
YYD1_k127_662430_2 ROK family K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 393.0
YYD1_k127_662430_3 Uncharacterised nucleotidyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 337.0
YYD1_k127_662430_4 HI0933-like protein K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 343.0
YYD1_k127_662430_5 peroxidase activity K00435 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002647 270.0
YYD1_k127_662430_6 HAD-hyrolase-like K07025 - - 0.00000000000000000000000000000000000000000007516 171.0
YYD1_k127_662430_7 4fe-4S ferredoxin, iron-sulfur binding domain protein K03522,K05337 - - 0.00000000000000000000001008 102.0
YYD1_k127_662430_8 general stress protein - - - 0.00000000000000001093 91.0
YYD1_k127_662430_9 Class III cytochrome C family - - - 0.0000000002168 68.0
YYD1_k127_6649036_0 Belongs to the UbiD family K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 604.0
YYD1_k127_6649036_1 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11779,K11784 - 1.21.98.1,2.5.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 412.0
YYD1_k127_6649036_2 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 295.0
YYD1_k127_6649036_3 Protein of unknown function (DUF1009) K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000608 271.0
YYD1_k127_6649036_4 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000001211 262.0
YYD1_k127_6649036_5 Amidohydrolase family K20810 - 3.5.4.40 0.000000000000000000000000000000000000000000000000000000000000000000336 244.0
YYD1_k127_6649036_6 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000002943 219.0
YYD1_k127_6649036_7 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K07081,K11782,K11784 - 1.21.98.1,4.2.1.151 0.00000000000000000000000000000000000000000000000000000002399 206.0
YYD1_k127_6649036_8 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000001603 183.0
YYD1_k127_6649036_9 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.000000000000000000000005013 118.0
YYD1_k127_6653921_0 aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 357.0
YYD1_k127_6653921_1 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 320.0
YYD1_k127_6653921_2 Belongs to the DapA family K01714,K22397 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005975,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016830,GO:0016832,GO:0019520,GO:0019752,GO:0032787,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0046176,GO:0046395,GO:0047440,GO:0071704,GO:0072329,GO:1901575 4.1.2.28,4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000004615 259.0
YYD1_k127_6653921_3 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000009089 208.0
YYD1_k127_6653921_4 NlpC/P60 family - - - 0.000000000000000000000000000001919 126.0
YYD1_k127_6653921_5 HNH nucleases - - - 0.0000000000001722 70.0
YYD1_k127_6653921_6 - - - - 0.0000000000003232 80.0
YYD1_k127_6653921_7 Alanine acetyltransferase K03790 - 2.3.1.128 0.000000000001732 76.0
YYD1_k127_667596_0 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 457.0
YYD1_k127_667596_1 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 430.0
YYD1_k127_667596_2 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006181 355.0
YYD1_k127_667596_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000081 346.0
YYD1_k127_667596_4 lipopolysaccharide transport protein B ATP-binding component of ABC superfamily K01990,K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 318.0
YYD1_k127_667596_5 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.00000000000000000000000000000000000000000163 163.0
YYD1_k127_667596_6 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.00000000000000000000000385 117.0
YYD1_k127_667596_7 lipopolysaccharide transport K09774 - - 0.0000000003901 73.0
YYD1_k127_6678296_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004785 450.0
YYD1_k127_6678296_1 queuine tRNA-ribosyltransferase activity K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006227 428.0
YYD1_k127_6678296_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006947 410.0
YYD1_k127_6678296_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000167 232.0
YYD1_k127_6678296_4 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000001218 222.0
YYD1_k127_6678296_5 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000003494 143.0
YYD1_k127_6678296_6 Tetratricopeptide repeat - - - 0.000000000000000000000000004236 129.0
YYD1_k127_6678296_7 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.00000000000000000004719 93.0
YYD1_k127_6679251_0 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 574.0
YYD1_k127_6679251_1 Peptidase, M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 379.0
YYD1_k127_6679251_2 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003711 392.0
YYD1_k127_6679251_3 Threonine dehydratase K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000002565 266.0
YYD1_k127_6679251_4 DinB family - - - 0.0000000006494 66.0
YYD1_k127_6679251_5 Beta-galactosidase trimerisation domain K12308 - 3.2.1.23 0.000008563 57.0
YYD1_k127_6689374_0 Mandelate Racemase Muconate Lactonizing - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004201 580.0
YYD1_k127_6689374_1 myo-inosose-2 dehydratase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000001044 239.0
YYD1_k127_6689374_2 serine O-acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000006336 143.0
YYD1_k127_6689374_3 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000002303 105.0
YYD1_k127_6689374_4 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000007191 64.0
YYD1_k127_6689374_5 Transglycosylase SLT domain - - - 0.0005322 49.0
YYD1_k127_670555_0 GTP-binding protein TypA K06207 - - 1.165e-268 838.0
YYD1_k127_670555_1 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 616.0
YYD1_k127_670555_2 Aminotransferase class-III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005432 563.0
YYD1_k127_670555_3 Dihydroorotate dehydrogenase K17723 GO:0003674,GO:0003824,GO:0003954,GO:0006139,GO:0006206,GO:0006208,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016491,GO:0016651,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 1.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 406.0
YYD1_k127_670555_4 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000000003999 205.0
YYD1_k127_670555_5 HD domain K00951 - 2.7.6.5 0.00000000000000000000000000000000000000000000000000000009118 201.0
YYD1_k127_670555_6 YbaK proline--tRNA ligase associated domain protein K19055 - - 0.00000000000000000000000000000000000000000000002071 176.0
YYD1_k127_670555_7 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000008197 155.0
YYD1_k127_6763250_0 peptidase S9 prolyl oligopeptidase active site K01303 - 3.4.19.1 7.797e-305 950.0
YYD1_k127_6763250_1 Protein of unknown function (DUF1553) - - - 8.186e-290 911.0
YYD1_k127_6763250_2 Lytic murein transglycosylase K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001177 265.0
YYD1_k127_6763250_3 PFAM Protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000001315 233.0
YYD1_k127_6763250_4 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000000004497 199.0
YYD1_k127_6763250_5 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K01802,K03767,K03772 - 5.2.1.8 0.000000000000000000000000000000000003672 139.0
YYD1_k127_6763250_7 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000001953 112.0
YYD1_k127_6763250_8 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0000000000000103 79.0
YYD1_k127_676804_0 ABC transporter, transmembrane K18890 - - 4.478e-203 666.0
YYD1_k127_676804_1 ABC transporter, transmembrane K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008592 591.0
YYD1_k127_676804_2 Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000002094 237.0
YYD1_k127_676804_3 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000004674 209.0
YYD1_k127_676804_4 3D domain - - - 0.00000000000000004717 89.0
YYD1_k127_676804_5 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.0000000000001874 76.0
YYD1_k127_676804_6 mRNA catabolic process K18682 - - 0.00000000001265 64.0
YYD1_k127_6779874_0 tail specific protease K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 337.0
YYD1_k127_6779874_1 Acetamidase/Formamidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 310.0
YYD1_k127_6779874_2 Enoyl- acyl-carrier-protein reductase NADH K00208 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004318,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006950,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0030497,GO:0032787,GO:0033554,GO:0036094,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051716,GO:0055114,GO:0065003,GO:0070417,GO:0071704,GO:0071840,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004281 286.0
YYD1_k127_6779874_3 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.0000000000000000000000000008672 114.0
YYD1_k127_6779874_4 Oxidoreductase FAD-binding domain - - - 0.000000000007694 72.0
YYD1_k127_6779874_5 - - - - 0.00000002348 63.0
YYD1_k127_6779874_6 Periplasmic or secreted lipoprotein K04065 GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 - 0.00000002977 59.0
YYD1_k127_6779874_7 GDP-mannose 4,6 dehydratase - - - 0.0000796 53.0
YYD1_k127_6780724_0 Oligopeptide transporter OPT - - - 4.578e-243 769.0
YYD1_k127_6780724_1 TIGRFAM aminoacyl-histidine dipeptidase K01270 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 565.0
YYD1_k127_6780724_2 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000000000000000000000002187 195.0
YYD1_k127_6780724_3 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000002712 180.0
YYD1_k127_6781870_0 Response regulator receiver - - - 8.634e-208 657.0
YYD1_k127_6781870_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 542.0
YYD1_k127_6781870_2 HlyD family secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 434.0
YYD1_k127_6781870_3 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 380.0
YYD1_k127_6781870_4 Domain of unknown function (DUF3459) K01236 - 3.2.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 357.0
YYD1_k127_6781870_5 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin K14645 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003004 265.0
YYD1_k127_6781870_6 Predicted membrane protein (DUF2231) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008353 251.0
YYD1_k127_6781870_7 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000007123 206.0
YYD1_k127_6781870_8 PAS fold - - - 0.00000000000000000000000000000000000002978 153.0
YYD1_k127_6781870_9 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000005757 119.0
YYD1_k127_6824501_0 Tricorn protease PDZ domain K08676 - - 7.94e-235 751.0
YYD1_k127_6824501_1 methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000001011 193.0
YYD1_k127_6824501_2 GDSL-like Lipase/Acylhydrolase - - - 0.0000000000000002426 91.0
YYD1_k127_68283_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001212 287.0
YYD1_k127_68283_1 PFAM peptidase S58, DmpA K01266 - 3.4.11.19 0.0000000000000000000000000000000000000000000000000000000000000007184 229.0
YYD1_k127_68283_2 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000001048 226.0
YYD1_k127_68283_3 Trehalose utilisation K09992 - - 0.000000000000000000000000000000000000000000000001073 184.0
YYD1_k127_6835620_0 Major Facilitator Superfamily K08191 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006965 504.0
YYD1_k127_6835620_1 FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 417.0
YYD1_k127_6835620_3 Imidazolonepropionase and related - - - 0.00000000000000000000000000000000000000000000000000000000000007575 228.0
YYD1_k127_6835620_4 Alpha beta hydrolase fold-3 domain protein - - - 0.0000000000000000000000000000000001097 149.0
YYD1_k127_685606_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 407.0
YYD1_k127_685606_1 amino acid-binding ACT domain protein K04518 - 4.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003022 285.0
YYD1_k127_685606_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000001401 193.0
YYD1_k127_685606_3 Heparinase II/III-like protein - - - 0.000000000000000000000000000000004299 148.0
YYD1_k127_6917699_0 PFAM Radical SAM superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 526.0
YYD1_k127_6917699_1 dehydrogenases and related proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005572 453.0
YYD1_k127_6917699_2 PFAM Transketolase K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005401 283.0
YYD1_k127_6917699_3 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000006805 244.0
YYD1_k127_6917699_4 Cellulose biosynthesis protein BcsQ K03496 - - 0.0000000000000000000000000000000000005104 150.0
YYD1_k127_6917699_5 Calcineurin-like phosphoesterase - - - 0.000000000000000003002 98.0
YYD1_k127_723033_0 Protein of unknown function (DUF1343) - - - 1.15e-238 762.0
YYD1_k127_723033_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001477 286.0
YYD1_k127_723033_2 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003359 275.0
YYD1_k127_723033_3 Polysaccharide lyase family 4, domain II - - - 0.00000000000000000000000000000000000000000000000000000000003644 215.0
YYD1_k127_723033_4 Protein of unknown function (DUF420) K08976 - - 0.0000000000000000000000000000000000000009032 153.0
YYD1_k127_732714_0 peptidase S9B dipeptidylpeptidase IV domain protein - - - 0.0 1060.0
YYD1_k127_732714_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 473.0
YYD1_k127_732714_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007053 444.0
YYD1_k127_732714_3 Alpha amylase, catalytic domain K06044 - 5.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 414.0
YYD1_k127_732714_4 - - - - 0.0000000000000000000000000000000000000000000000000000000005948 208.0
YYD1_k127_732714_5 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000000003754 189.0
YYD1_k127_790966_0 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005443 284.0
YYD1_k127_790966_1 FMN-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003811 258.0
YYD1_k127_790966_2 - K03616 - - 0.0000000000000000000000000000214 128.0
YYD1_k127_816429_0 Halogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000004615 254.0
YYD1_k127_816429_1 Retinal pigment epithelial membrane protein - - - 0.00000000000000000000000000000000000008251 164.0
YYD1_k127_816429_2 pfam abc1 K03688 - - 0.00000000000000000004261 105.0
YYD1_k127_826072_0 Surface antigen variable number - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008178 300.0
YYD1_k127_826072_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000001269 164.0
YYD1_k127_826072_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000006218 163.0
YYD1_k127_826072_3 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000001635 134.0
YYD1_k127_826072_4 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.00004603 55.0
YYD1_k127_84543_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K07516 - 1.1.1.35 1.162e-220 709.0
YYD1_k127_84543_1 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 408.0
YYD1_k127_84543_2 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 353.0
YYD1_k127_84543_3 peptidase activity, acting on L-amino acid peptides K14647,K20276,K21449 - - 0.0000000000000000000000000000000000000000000000000000000000001903 229.0
YYD1_k127_84543_4 YsiA-like protein, C-terminal region K13770 - - 0.000000000000000000000000000000000000000003428 162.0
YYD1_k127_84543_5 hydrolase of the alpha beta K07018 - - 0.00000000000000000000000000000000000000003123 160.0
YYD1_k127_84543_6 PFAM Uncharacterised BCR, COG1937 K21600 - - 0.000000000000000005203 89.0
YYD1_k127_84543_7 hydrolase activity, acting on ester bonds - - - 0.00000000000000003223 91.0
YYD1_k127_84543_8 peptidyl-tyrosine sulfation - - - 0.00000001371 66.0
YYD1_k127_870337_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 574.0
YYD1_k127_870337_1 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000006423 98.0
YYD1_k127_870337_2 - - - - 0.00000002131 60.0
YYD1_k127_871827_0 Domain of unknown function (DUF4139) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007649 550.0
YYD1_k127_871827_1 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 332.0
YYD1_k127_871827_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000001969 264.0
YYD1_k127_874380_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009513 456.0
YYD1_k127_874380_1 response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005592 398.0
YYD1_k127_874380_2 PFAM Radical SAM domain protein K06871 - - 0.0000000000000000000000000000000000000000000000001009 196.0
YYD1_k127_874380_3 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000276 134.0
YYD1_k127_88288_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006724 589.0
YYD1_k127_88288_1 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008724 466.0
YYD1_k127_88288_2 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 381.0
YYD1_k127_88288_3 DJ-1/PfpI family K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 314.0
YYD1_k127_88288_4 Belongs to the glycosyl hydrolase 26 family - - - 0.00000000000000000000128 105.0
YYD1_k127_890854_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006779 404.0
YYD1_k127_890854_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007063 381.0
YYD1_k127_890854_2 Cobyrinic acid ac-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006503 298.0
YYD1_k127_890854_3 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000007167 197.0
YYD1_k127_890854_4 chromosome segregation K03497 - - 0.0000000000000000000000000000000000000000000000000002417 193.0
YYD1_k127_899580_0 beta-galactosidase activity - - - 9.818e-320 997.0
YYD1_k127_899580_1 alpha beta - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 374.0
YYD1_k127_899580_2 protein conserved in bacteria K04750 - - 0.0000000000000000000000000000000000000000000000007842 178.0
YYD1_k127_899580_3 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000002767 108.0
YYD1_k127_909212_0 S-adenosylmethionine synthetase, C-terminal domain K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003297 569.0
YYD1_k127_909212_1 TIGRFAM Tyrosine recombinase XerD K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001634 278.0
YYD1_k127_909212_2 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.000000000000000000000000000000000000000000000000000000000000000002827 234.0
YYD1_k127_909212_3 protocatechuate 3,4-dioxygenase - - - 0.000000000000000000009151 108.0
YYD1_k127_909212_4 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.00000000000000000408 88.0
YYD1_k127_909212_5 protein transport - - - 0.0000000000004822 74.0
YYD1_k127_909490_0 transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005265 610.0
YYD1_k127_909490_1 ApbE family - - - 0.00000000000000000000000000000000001823 148.0
YYD1_k127_909490_2 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000006233 117.0
YYD1_k127_913533_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009259 307.0
YYD1_k127_913533_1 diguanylate cyclase - - - 0.00000000000000000000000000000000000003764 160.0
YYD1_k127_913533_2 Tetratricopeptide repeat - - - 0.00001346 56.0
YYD1_k127_930176_0 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 340.0
YYD1_k127_930176_1 mannose-ethanolamine phosphotransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009519 296.0
YYD1_k127_930176_2 conserved protein (COG2071) K09166 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003474 270.0
YYD1_k127_930176_3 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000002485 184.0
YYD1_k127_930176_4 Periplasmic or secreted lipoprotein K04065 GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 - 0.000002783 56.0
YYD1_k127_936193_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 4.735e-273 861.0
YYD1_k127_936193_1 MatE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 606.0
YYD1_k127_936193_10 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 348.0
YYD1_k127_936193_11 Putative neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007251 319.0
YYD1_k127_936193_12 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 304.0
YYD1_k127_936193_13 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000001844 252.0
YYD1_k127_936193_14 xanthine dehydrogenase activity K13479 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000002808 239.0
YYD1_k127_936193_15 methionine sulfoxide reductase K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000001136 221.0
YYD1_k127_936193_16 Oxidoreductase family, C-terminal alpha beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000002781 230.0
YYD1_k127_936193_17 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000007973 193.0
YYD1_k127_936193_18 Beta-lactamase - - - 0.000000000000000000000000000000000000000000002997 178.0
YYD1_k127_936193_19 DinB superfamily - - - 0.0000000000000000000000000000000000000000006234 167.0
YYD1_k127_936193_2 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003975 567.0
YYD1_k127_936193_20 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000004345 141.0
YYD1_k127_936193_21 - - - - 0.00000000000000000000000000001738 129.0
YYD1_k127_936193_23 cellular response to DNA damage stimulus K07340 - - 0.0000000000000000000004796 101.0
YYD1_k127_936193_24 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.000000000000000000001906 104.0
YYD1_k127_936193_26 Polymer-forming cytoskeletal - - - 0.000000000000004429 81.0
YYD1_k127_936193_28 oxidoreductase activity - - - 0.00009378 55.0
YYD1_k127_936193_3 SPFH domain-Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 526.0
YYD1_k127_936193_4 acetyl-CoA hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 481.0
YYD1_k127_936193_5 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005666 487.0
YYD1_k127_936193_6 Amidohydrolase family K01466 - 3.5.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 487.0
YYD1_k127_936193_7 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 458.0
YYD1_k127_936193_8 tRNA wobble cytosine modification - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008167 450.0
YYD1_k127_936193_9 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009949 447.0
YYD1_k127_944152_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 375.0
YYD1_k127_944152_1 Inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000004078 235.0
YYD1_k127_944152_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000003471 228.0
YYD1_k127_944152_3 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.000000000000000000000000000000682 130.0
YYD1_k127_944152_4 oligosaccharyl transferase activity - - - 0.000000000000000000000000000001543 137.0
YYD1_k127_944152_5 SNARE associated Golgi protein - - - 0.0000000000000000000000000000929 123.0
YYD1_k127_944152_6 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.0000000000000000000000004706 110.0
YYD1_k127_944152_7 PFAM glycosyl transferase family 2 - - - 0.0000000000000000000004531 98.0
YYD1_k127_944152_8 - - - - 0.000000000144 71.0
YYD1_k127_944891_0 PFAM Cytochrome C assembly protein K02198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008871 552.0
YYD1_k127_944891_1 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000005837 182.0
YYD1_k127_944891_2 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000003914 83.0
YYD1_k127_958608_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 316.0
YYD1_k127_958608_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 321.0
YYD1_k127_958608_2 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000004297 224.0
YYD1_k127_958608_3 Surface antigen - - - 0.000000000000000003213 98.0
YYD1_k127_958608_4 Pfam:DUF2029 - - - 0.000000003221 64.0
YYD1_k127_964490_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009033 571.0
YYD1_k127_964490_1 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003632 284.0
YYD1_k127_964490_2 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000000000000002011 173.0
YYD1_k127_964490_3 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000001172 183.0
YYD1_k127_964490_4 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000000000000004249 125.0
YYD1_k127_964490_5 Bacterial protein of unknown function (DUF937) - - - 0.00000000000000000000000003902 110.0
YYD1_k127_971869_0 Mo-molybdopterin cofactor metabolic process K03148,K03636,K21029,K21147 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006732,GO:0006777,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0016782,GO:0018130,GO:0019344,GO:0019538,GO:0019637,GO:0019720,GO:0019752,GO:0020012,GO:0030312,GO:0030682,GO:0042783,GO:0043170,GO:0043207,GO:0043436,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0061605,GO:0070566,GO:0071704,GO:0071944,GO:0075136,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.73,2.7.7.80,2.8.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 606.0
YYD1_k127_971869_1 peptidase dimerisation domain protein K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 486.0
YYD1_k127_971869_2 Belongs to the cysteine synthase cystathionine beta- synthase family K12339,K21148 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0032991,GO:0033847,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.113,2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 380.0
YYD1_k127_971869_3 PFAM Endonuclease Exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000491 277.0
YYD1_k127_971869_4 JAB/MPN domain K21140 - 3.13.1.6 0.00000000000000000000000000000000455 132.0