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Overview

ID MAG04630
Name YYD2_bin.1
Sample SMP0125
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Vicinamibacteria
Order Vicinamibacterales
Family UBA2999
Genus Gp6-AA40
Species
Assembly information
Completeness (%) 94.7
Contamination (%) 3.28
GC content (%) 65.0
N50 (bp) 13,062
Genome size (bp) 7,127,241

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes5863

Gene name Description KEGG GOs EC E-value Score Sequence
YYD2_k127_1002242_0 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000005408 88.0
YYD2_k127_1002242_1 B12 binding domain - - - 0.00000000000000718 76.0
YYD2_k127_1002242_2 - - - - 0.000000000002869 72.0
YYD2_k127_1011787_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 2.646e-200 653.0
YYD2_k127_1011787_1 DNA-binding transcription factor activity - - - 0.0000000000000000000000000000000000001281 147.0
YYD2_k127_1011787_3 - - - - 0.0000007509 53.0
YYD2_k127_1011787_4 SMART nuclease (SNase domain-containing protein) K01174 - 3.1.31.1 0.000002769 57.0
YYD2_k127_101339_0 5TM C-terminal transporter carbon starvation CstA K06200 - - 1.836e-291 908.0
YYD2_k127_101339_1 SMP-30/Gluconolaconase/LRE-like region K01053,K13735 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 434.0
YYD2_k127_101339_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000002829 168.0
YYD2_k127_101339_3 PIN domain - - - 0.00000000000000000000000000000000001966 138.0
YYD2_k127_101339_4 DivIVA protein K04074 - - 0.0000000000000002226 86.0
YYD2_k127_1021738_0 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006825 391.0
YYD2_k127_1021738_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006498 357.0
YYD2_k127_1021738_2 DinB family - - - 0.0000000000000000000000000000000000000000000001208 172.0
YYD2_k127_1021738_3 Protein of unknown function (DUF1572) - - - 0.00000000000000000000000000000000000000000001711 168.0
YYD2_k127_102446_0 Putative Na+/H+ antiporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005406 545.0
YYD2_k127_102446_1 Crp-like helix-turn-helix domain - - - 0.000000000000000000000000000003289 134.0
YYD2_k127_102446_2 PFAM Response regulator receiver domain - - - 0.0000000000005376 74.0
YYD2_k127_102446_3 - - - - 0.000004515 58.0
YYD2_k127_1037347_0 MacB-like periplasmic core domain - - - 4.059e-259 824.0
YYD2_k127_1037347_1 MacB-like periplasmic core domain - - - 2.375e-255 816.0
YYD2_k127_1037347_10 Uncharacterized conserved protein (DUF2164) - - - 0.0000000000000004687 80.0
YYD2_k127_1037347_11 Metallo-beta-lactamase superfamily - - - 0.00000004266 58.0
YYD2_k127_1037347_2 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 631.0
YYD2_k127_1037347_3 methyltransferase activity K21310 - 2.1.1.334 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005808 358.0
YYD2_k127_1037347_4 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000005976 205.0
YYD2_k127_1037347_5 transcriptional regulator PadR family - - - 0.0000000000000000000000000000000000000000000000001304 178.0
YYD2_k127_1037347_6 enzyme related to lactoylglutathione lyase K06996 - - 0.000000000000000000000000000000000000000003996 166.0
YYD2_k127_1037347_7 MacB-like periplasmic core domain - - - 0.0000000000000000000000006241 109.0
YYD2_k127_1037347_8 Protein of unknown function (DUF454) K09790 - - 0.00000000000000000000009755 104.0
YYD2_k127_1037347_9 Sigma-70 region 2 K03088 GO:0001101,GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009410,GO:0009415,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042221,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1901700,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.0000000000000002845 88.0
YYD2_k127_1037548_0 Transposase domain (DUF772) K07487 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003842 482.0
YYD2_k127_1037548_1 carboxylic ester hydrolase activity - - - 0.0000000000000497 83.0
YYD2_k127_1037548_2 - - - - 0.00007821 53.0
YYD2_k127_104238_0 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004447 430.0
YYD2_k127_104238_1 HupE / UreJ protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009807 385.0
YYD2_k127_104238_2 COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide 5, 6-dimethylbenzimidazole phosphoribosyltransferase) K09883 - 6.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 378.0
YYD2_k127_104238_3 Belongs to the GPAT DAPAT family - - - 0.0000000000000000000000000000000000000000000000000000000000000002742 232.0
YYD2_k127_104238_4 - - - - 0.0000000000000000000000000000000000001656 154.0
YYD2_k127_104238_5 Cysteine-rich CPXCG - - - 0.00000002055 60.0
YYD2_k127_1062316_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000006072 154.0
YYD2_k127_1062675_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004545 313.0
YYD2_k127_1062675_1 Thioredoxin - - - 0.0000000000000003155 85.0
YYD2_k127_1062675_2 protein kinase activity - - - 0.00000002999 59.0
YYD2_k127_1063162_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008385 375.0
YYD2_k127_1063162_1 - - - - 0.00000000000000000000000000000000000000000000000000000000002576 218.0
YYD2_k127_1063162_2 methyltransferase K00563,K10947 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008270,GO:0008649,GO:0008757,GO:0008989,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046914,GO:0052912,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.187 0.0000000000000000000000000000000000000000000001311 180.0
YYD2_k127_1064519_0 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.0000000000000000000000000000000000000118 166.0
YYD2_k127_1064519_1 TPR repeat - - - 0.00006791 54.0
YYD2_k127_1068560_0 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 317.0
YYD2_k127_1068560_1 dienelactone hydrolase - - - 0.0000000000000000000000000000000006096 132.0
YYD2_k127_1068560_2 - - - - 0.00001187 54.0
YYD2_k127_1068880_0 PFAM Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 510.0
YYD2_k127_1068880_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005649 497.0
YYD2_k127_1068880_2 pfkB family carbohydrate kinase K18478 - 2.7.1.184 0.0000000000000000000000000000000000000000000000002632 187.0
YYD2_k127_1068880_3 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000005559 133.0
YYD2_k127_1068880_4 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000004738 60.0
YYD2_k127_1070351_0 type VI secretion protein K11900 - - 1.886e-298 918.0
YYD2_k127_1070351_1 ImcF-related N-terminal domain K11891 - - 1.101e-272 880.0
YYD2_k127_1070351_10 Virulence protein SciE type K11898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005307 362.0
YYD2_k127_1070351_11 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000887 368.0
YYD2_k127_1070351_12 type VI secretion-associated protein, BMA_A0400 family K11890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 346.0
YYD2_k127_1070351_13 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006592 314.0
YYD2_k127_1070351_14 Type VI secretion system, VipA, VC_A0107 or Hcp2 K11901 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 290.0
YYD2_k127_1070351_15 Forkhead associated domain K11894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000171 265.0
YYD2_k127_1070351_16 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000006532 246.0
YYD2_k127_1070351_17 Type VI secretion system effector, Hcp K11903 - - 0.000000000000000000000000000000000000000000000000000000000000000257 223.0
YYD2_k127_1070351_18 peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000001005 218.0
YYD2_k127_1070351_19 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000001023 225.0
YYD2_k127_1070351_2 Type VI secretion protein K11896 - - 8.655e-256 804.0
YYD2_k127_1070351_20 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000001282 205.0
YYD2_k127_1070351_21 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000002113 209.0
YYD2_k127_1070351_22 domain protein - - - 0.0000000000000000000000000000000000000000000000000007847 195.0
YYD2_k127_1070351_23 TIGRFAM type VI secretion system lysozyme-related protein K11897 - - 0.000000000000000000000000000000000000000000000000001781 188.0
YYD2_k127_1070351_24 Type VI secretion system effector, Hcp K11903 - - 0.0000000000000000000000000000000000000000000000001938 185.0
YYD2_k127_1070351_25 Pfam:T6SS_VasB K11895 - - 0.0000000000000000000000000000000000000000000005397 170.0
YYD2_k127_1070351_26 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000002665 175.0
YYD2_k127_1070351_27 TIGRFAM type VI secretion-associated protein, ImpA family K11902 - - 0.000000000000000000000000000000000000000000121 173.0
YYD2_k127_1070351_28 Glycosyl transferase family group 2 K07011 - - 0.00000000000000000000000000000000000001294 156.0
YYD2_k127_1070351_29 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000002962 157.0
YYD2_k127_1070351_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 565.0
YYD2_k127_1070351_30 bacterial (prokaryotic) histone like domain K03530 - - 0.00000000000000000000000000005507 125.0
YYD2_k127_1070351_31 protein conserved in bacteria K11906 - - 0.000000000000000000000000002423 118.0
YYD2_k127_1070351_32 Glycosyltransferase Family 4 - - - 0.000000000000000000001549 101.0
YYD2_k127_1070351_33 regulatory protein, MerR - - - 0.000000000001044 76.0
YYD2_k127_1070351_34 dehydrogenase - - - 0.000003721 52.0
YYD2_k127_1070351_4 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 566.0
YYD2_k127_1070351_5 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 492.0
YYD2_k127_1070351_6 type VI secretion protein K11893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009164 477.0
YYD2_k127_1070351_7 Type IV VI secretion system protein, DotU family K11892 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 395.0
YYD2_k127_1070351_8 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 383.0
YYD2_k127_1070351_9 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784,K12448 - 5.1.3.2,5.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 367.0
YYD2_k127_1073594_0 oxidoreductase activity K11089 - - 1.788e-195 623.0
YYD2_k127_1079945_0 Belongs to the TPP enzyme family K01577,K01652 - 2.2.1.6,4.1.1.8 0.0 1013.0
YYD2_k127_1079945_1 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate K07749 - 2.8.3.16 2.069e-242 751.0
YYD2_k127_1079945_11 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form - - - 0.00003002 48.0
YYD2_k127_1079945_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 595.0
YYD2_k127_1079945_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003445 326.0
YYD2_k127_1079945_4 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 297.0
YYD2_k127_1079945_5 - K09957 - - 0.000000000000000000000000000000000000000000000000000000000000007869 225.0
YYD2_k127_1079945_6 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000008328 205.0
YYD2_k127_1079945_7 - - - - 0.00000000000000000000001374 107.0
YYD2_k127_1079945_8 amidohydrolase - - - 0.000000000000000000001492 108.0
YYD2_k127_1079945_9 DinB family - - - 0.000000001271 66.0
YYD2_k127_1081739_0 Angiotensin-converting enzyme K01283 - 3.4.15.1 3.145e-269 840.0
YYD2_k127_1081739_1 Bacterial transcriptional activator domain - - - 1.096e-212 696.0
YYD2_k127_1081739_10 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000002837 220.0
YYD2_k127_1081739_11 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000000209 170.0
YYD2_k127_1081739_12 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000359 167.0
YYD2_k127_1081739_13 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000002101 163.0
YYD2_k127_1081739_14 - - - - 0.0000000000000000000000000000000000000003652 155.0
YYD2_k127_1081739_15 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000003758 131.0
YYD2_k127_1081739_16 Glyoxalase-like domain K04750 - - 0.00000000000000000000007236 111.0
YYD2_k127_1081739_17 Cupin 2, conserved barrel domain protein K16953,K19547 - 4.4.1.3,5.3.3.19 0.0000000000000000000187 97.0
YYD2_k127_1081739_18 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000001181 101.0
YYD2_k127_1081739_19 - - - - 0.0000000000236 74.0
YYD2_k127_1081739_2 Xylose isomerase domain protein TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 503.0
YYD2_k127_1081739_20 Protein of unknown function (DUF3738) - - - 0.000001013 52.0
YYD2_k127_1081739_3 beta-keto acid cleavage enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 406.0
YYD2_k127_1081739_4 PFAM Uncharacterised conserved protein UCP016719 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008733 396.0
YYD2_k127_1081739_5 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 385.0
YYD2_k127_1081739_6 Putative esterase K07214 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 371.0
YYD2_k127_1081739_7 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000026 253.0
YYD2_k127_1081739_8 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000001095 227.0
YYD2_k127_1081739_9 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000001029 223.0
YYD2_k127_1084710_0 PQQ-like domain K05889 - 1.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006227 448.0
YYD2_k127_1084710_1 lactoylglutathione lyase activity K03088 - - 0.000000000000000000000000000000000000000000000000000000000002041 218.0
YYD2_k127_1089305_0 electron transport chain K00347,K03614 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 598.0
YYD2_k127_1089305_1 electron transport chain K00347,K03614,K21163 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000004388 204.0
YYD2_k127_1090424_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.692e-217 686.0
YYD2_k127_1090424_1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 553.0
YYD2_k127_1090424_2 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000001095 228.0
YYD2_k127_1090424_3 PFAM cobalamin B12-binding domain protein K01849 - 5.4.99.2 0.00000000000000000000000000000005764 130.0
YYD2_k127_1090424_4 oxidoreductase activity - - - 0.0000000000000002458 94.0
YYD2_k127_1099446_0 polyribonucleotide nucleotidyltransferase activity K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 1.986e-232 739.0
YYD2_k127_1099446_1 PFAM tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 5.767e-224 702.0
YYD2_k127_1099446_10 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 306.0
YYD2_k127_1099446_11 Peptidase M48 K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000008852 269.0
YYD2_k127_1099446_12 DHH family K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000008651 237.0
YYD2_k127_1099446_13 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000007162 224.0
YYD2_k127_1099446_14 phosphotransferase related to Ser Thr protein kinases K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000005326 223.0
YYD2_k127_1099446_15 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000734 208.0
YYD2_k127_1099446_16 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000424 138.0
YYD2_k127_1099446_17 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000001757 146.0
YYD2_k127_1099446_18 Nucleotidyl transferase K00966,K16881 - 2.7.7.13,5.4.2.8 0.000000000000000000000000000000003664 142.0
YYD2_k127_1099446_19 Required for maturation of 30S ribosomal subunits K09748 - - 0.000000000000000000000000000001559 129.0
YYD2_k127_1099446_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.488e-206 675.0
YYD2_k127_1099446_20 CYTH K05873 - 4.6.1.1 0.00000000000000000000000000001273 125.0
YYD2_k127_1099446_21 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000002412 116.0
YYD2_k127_1099446_22 Collagen triple helix repeat (20 copies) - - - 0.0000000000000000000000004564 118.0
YYD2_k127_1099446_23 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117,K03646 - - 0.0000000000000006749 81.0
YYD2_k127_1099446_24 - - - - 0.0000000000000008726 88.0
YYD2_k127_1099446_25 Protein of unknown function (DUF503) K09764 - - 0.0000000000001258 79.0
YYD2_k127_1099446_26 Cupredoxin-like domain K00376 - 1.7.2.4 0.00000001025 61.0
YYD2_k127_1099446_27 Type IV Pilus-assembly protein W K02672 - - 0.000002034 61.0
YYD2_k127_1099446_28 Putative adhesin - - - 0.0003622 52.0
YYD2_k127_1099446_29 - - - - 0.0005459 48.0
YYD2_k127_1099446_3 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.15 2.894e-195 645.0
YYD2_k127_1099446_4 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 457.0
YYD2_k127_1099446_5 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 429.0
YYD2_k127_1099446_6 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 432.0
YYD2_k127_1099446_7 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 445.0
YYD2_k127_1099446_8 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 385.0
YYD2_k127_1099446_9 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005265 327.0
YYD2_k127_1101300_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 491.0
YYD2_k127_1101300_1 Major facilitator K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005454 452.0
YYD2_k127_1101300_10 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000008026 244.0
YYD2_k127_1101300_11 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.00000000000000000000000000000000000000000000000000000000000008613 228.0
YYD2_k127_1101300_12 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000002521 210.0
YYD2_k127_1101300_13 translation initiation inhibitor, yjgF family K04782 - 4.2.99.21 0.0000000000000000000000000000000000000000000000000001362 188.0
YYD2_k127_1101300_14 - K06921 - - 0.000000000000000000000000000000000000000000000006579 186.0
YYD2_k127_1101300_15 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000001141 138.0
YYD2_k127_1101300_16 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000006959 133.0
YYD2_k127_1101300_17 Periplasmic or secreted lipoprotein - - - 0.000000000000000000000002793 113.0
YYD2_k127_1101300_18 Polymer-forming cytoskeletal - - - 0.00000000000000000000005974 103.0
YYD2_k127_1101300_19 Domain of Unknown Function (DUF1080) - - - 0.000000000001718 76.0
YYD2_k127_1101300_2 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 394.0
YYD2_k127_1101300_20 helix_turn_helix, mercury resistance - - - 0.000000000005922 72.0
YYD2_k127_1101300_3 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 368.0
YYD2_k127_1101300_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 320.0
YYD2_k127_1101300_5 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 294.0
YYD2_k127_1101300_6 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 299.0
YYD2_k127_1101300_7 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003228 302.0
YYD2_k127_1101300_8 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005377 276.0
YYD2_k127_1101300_9 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000001443 273.0
YYD2_k127_1127915_0 PFAM sigma-54 factor interaction domain-containing protein K00575,K12266 - 2.1.1.80 1.318e-292 914.0
YYD2_k127_1127915_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005313 337.0
YYD2_k127_1127915_2 MEDS: MEthanogen/methylotroph, DcmR Sensory domain - - - 0.000000000000000000000000000000000000000000000000000000000000000321 226.0
YYD2_k127_1127915_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000005485 61.0
YYD2_k127_1130736_0 - - - - 0.0000000000000000000000000003436 124.0
YYD2_k127_1130736_1 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000005522 55.0
YYD2_k127_1131983_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 484.0
YYD2_k127_1131983_1 PFAM aminotransferase, class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 370.0
YYD2_k127_1131983_10 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000008245 128.0
YYD2_k127_1131983_2 Phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 351.0
YYD2_k127_1131983_3 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 359.0
YYD2_k127_1131983_4 ATP synthesis coupled electron transport K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 341.0
YYD2_k127_1131983_5 aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001116 290.0
YYD2_k127_1131983_6 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000003457 220.0
YYD2_k127_1131983_7 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000000000000000000000000002623 213.0
YYD2_k127_1131983_8 AI-2E family transporter K03548 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.000000000000000000000000000000000003894 150.0
YYD2_k127_1131983_9 Belongs to the ompA family - - - 0.0000000000000000000000000000002405 132.0
YYD2_k127_1136883_0 TonB-dependent Receptor Plug Domain - - - 0.0 1039.0
YYD2_k127_1136883_1 Phosphoadenosine phosphosulfate reductase family K00957 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 477.0
YYD2_k127_1136883_2 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00956 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004422 481.0
YYD2_k127_1136883_3 response to heat K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 330.0
YYD2_k127_1136883_4 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 299.0
YYD2_k127_1136883_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003104 286.0
YYD2_k127_1136883_6 Phosphoadenosine phosphosulfate reductase family K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000009291 257.0
YYD2_k127_1136883_7 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000004964 192.0
YYD2_k127_1136883_8 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000003834 149.0
YYD2_k127_1140942_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 392.0
YYD2_k127_1140942_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 297.0
YYD2_k127_1140942_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002724 252.0
YYD2_k127_1140942_3 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.000000000000000000000000000000000000000000000009304 177.0
YYD2_k127_1140942_4 Protein of unknown function (DUF3014) - - - 0.000000000000000000000000000000001388 141.0
YYD2_k127_1144325_0 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000003965 174.0
YYD2_k127_1144325_1 metal-dependent hydrolase with the TIM-barrel fold - - - 0.000000000000000000000000000000000000000005714 168.0
YYD2_k127_1148148_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 8.226e-197 644.0
YYD2_k127_1151112_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 497.0
YYD2_k127_1151112_1 Serine aminopeptidase, S33 K06889 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0009605,GO:0009607,GO:0030312,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052561,GO:0052562,GO:0052564,GO:0052572,GO:0071944,GO:0075136 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001468 272.0
YYD2_k127_1151112_2 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.0000000000000000000000000000000000000000000000000000000000000000000212 241.0
YYD2_k127_1151112_3 Pseudouridine synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000005439 158.0
YYD2_k127_1151112_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000001591 122.0
YYD2_k127_1151112_5 Amidohydrolase K22213 - 4.1.1.52 0.000000000000000000000003974 106.0
YYD2_k127_1151112_6 NUDIX domain - - - 0.00000000000000000000007265 103.0
YYD2_k127_1161711_0 PFAM Radical SAM - - - 1.234e-212 670.0
YYD2_k127_1161711_1 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 510.0
YYD2_k127_117236_0 Tetratricopeptide repeat K08884,K12132 - 2.7.11.1 2.534e-273 866.0
YYD2_k127_117236_1 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000000000000005586 215.0
YYD2_k127_117236_2 PIN domain - - - 0.00000000000000000000000000000000000000000006187 168.0
YYD2_k127_117236_4 spheroidene monooxygenase - - - 0.00000002589 64.0
YYD2_k127_117236_5 - - - - 0.0003196 46.0
YYD2_k127_1194304_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.732e-233 741.0
YYD2_k127_1194304_1 Kelch motif - - - 0.0000000000000000000000000001053 133.0
YYD2_k127_1194304_2 Uncharacterized protein conserved in bacteria (DUF2239) K09965 - - 0.00000000000000000000000002366 109.0
YYD2_k127_1194304_3 domain, Protein - - - 0.0000000000000007748 91.0
YYD2_k127_1197343_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005736 381.0
YYD2_k127_1197343_1 Right handed beta helix region - - - 0.00000000008532 73.0
YYD2_k127_1209189_0 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 423.0
YYD2_k127_120951_0 AMP-binding enzyme C-terminal domain - - - 1.881e-240 754.0
YYD2_k127_120951_1 metallopeptidase activity K03568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 515.0
YYD2_k127_120951_2 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 523.0
YYD2_k127_120951_3 phosphorelay signal transduction system K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005527 512.0
YYD2_k127_120951_4 Putative modulator of DNA gyrase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003251 416.0
YYD2_k127_120951_5 ATP:ADP antiporter activity K01932,K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008791 361.0
YYD2_k127_120951_6 Domain of unknown function (DU1801) - - - 0.00000000000004479 74.0
YYD2_k127_120951_7 Tetratricopeptide repeat - - - 0.0003493 52.0
YYD2_k127_1213629_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008987 280.0
YYD2_k127_1213629_1 PFAM blue (type 1) copper domain protein - - - 0.0000002264 57.0
YYD2_k127_121576_0 homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 602.0
YYD2_k127_121576_1 Histidine kinase internal region K02478 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 340.0
YYD2_k127_121576_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00337,K00338 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000003681 174.0
YYD2_k127_121576_11 Polysaccharide export protein K01991,K20988 - - 0.000000000000000000000000000000000000000003749 168.0
YYD2_k127_121576_12 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000003625 148.0
YYD2_k127_121576_13 Glycosyl transferases group 1 - - - 0.000000000000000000000000001672 126.0
YYD2_k127_121576_14 Polysaccharide biosynthesis protein - - - 0.00000000000000000000073 110.0
YYD2_k127_121576_15 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000008265 59.0
YYD2_k127_121576_16 Putative beta-barrel porin 2 - - - 0.000003036 59.0
YYD2_k127_121576_17 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0005692 43.0
YYD2_k127_121576_2 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 330.0
YYD2_k127_121576_3 Two component transcriptional regulator, LytTR family K02477,K07705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007731 268.0
YYD2_k127_121576_4 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000257 253.0
YYD2_k127_121576_5 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000001136 213.0
YYD2_k127_121576_6 transferase activity, transferring glycosyl groups K00713,K03280 - 2.4.1.56 0.0000000000000000000000000000000000000000000000000000000126 216.0
YYD2_k127_121576_7 ubiE/COQ5 methyltransferase family K00570 - 2.1.1.17,2.1.1.71 0.00000000000000000000000000000000000000000000000000001135 197.0
YYD2_k127_121576_8 - - - - 0.00000000000000000000000000000000000000000000000000004186 205.0
YYD2_k127_121576_9 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000003353 197.0
YYD2_k127_1216818_1 phosphoprotein phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000003054 236.0
YYD2_k127_1216818_2 phosphoprotein phosphatase activity K14680 - 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000001242 213.0
YYD2_k127_1216818_3 TLC ATP/ADP transporter K03301 - - 0.0000000000000000000005559 112.0
YYD2_k127_12186_0 Type VI secretion protein K11896 - - 9.122e-265 829.0
YYD2_k127_12186_1 Pfam:T6SS_VasB K11895 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001234 272.0
YYD2_k127_12186_2 TIGRFAM type VI secretion system lysozyme-related protein K11897 - - 0.00000000000000000000000000000000000000000000000000000000000005199 218.0
YYD2_k127_12186_3 ImpE protein K11898 - - 0.0000000000000000000000000000002748 124.0
YYD2_k127_1244888_0 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000916 411.0
YYD2_k127_1244888_1 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005987 386.0
YYD2_k127_1244888_2 G-rich domain on putative tyrosine kinase K16554 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 375.0
YYD2_k127_1244888_3 General secretion pathway K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000003736 194.0
YYD2_k127_1244888_4 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000005601 160.0
YYD2_k127_1244888_5 Uncharacterised nucleotidyltransferase - - - 0.000000000000000000000000000000000003035 149.0
YYD2_k127_1244888_6 Putative restriction endonuclease - - - 0.00000000000000000000000000000000002173 141.0
YYD2_k127_1244888_7 Methyltransferase FkbM domain - - - 0.0000000000000000000000000000000001162 143.0
YYD2_k127_1244888_9 Transglutaminase-like superfamily - - - 0.00005527 51.0
YYD2_k127_1250848_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003561 250.0
YYD2_k127_1250848_1 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000000000000000000000002171 201.0
YYD2_k127_1250848_2 NHL repeat - - - 0.0000000009836 59.0
YYD2_k127_1251244_0 methyltransferase activity K21310 - 2.1.1.334 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003638 349.0
YYD2_k127_1251244_1 MOSC domain - - - 0.000000000000000000000000000000000000000000000008132 175.0
YYD2_k127_1251244_2 - - - - 0.0000000000000000000000000000000000000000000009299 182.0
YYD2_k127_1251244_3 Protein of unknown function (DUF454) K09790 - - 0.0000000000000000782 89.0
YYD2_k127_1264993_0 Cytosine deaminase and related metal-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 474.0
YYD2_k127_1264993_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005994 420.0
YYD2_k127_1264993_2 HNH nucleases - - - 0.000000000000000000005024 99.0
YYD2_k127_1264993_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.000008518 51.0
YYD2_k127_1264993_4 - - - - 0.0001966 51.0
YYD2_k127_1274057_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 2.46e-249 797.0
YYD2_k127_1274057_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006558 452.0
YYD2_k127_1274057_10 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000000000000000000000002936 126.0
YYD2_k127_1274057_11 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000001789 134.0
YYD2_k127_1274057_12 thymidylate kinase K00943 GO:0003674,GO:0003824,GO:0004550,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006165,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000005453 129.0
YYD2_k127_1274057_13 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000001452 117.0
YYD2_k127_1274057_15 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000005371 88.0
YYD2_k127_1274057_16 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000001122 70.0
YYD2_k127_1274057_17 - - - - 0.0000002708 61.0
YYD2_k127_1274057_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000461 387.0
YYD2_k127_1274057_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 370.0
YYD2_k127_1274057_4 Carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006564 368.0
YYD2_k127_1274057_5 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0008654,GO:0008759,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009633 290.0
YYD2_k127_1274057_6 Protein of unknown function (DUF418) K07148 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003793 266.0
YYD2_k127_1274057_7 DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000647 248.0
YYD2_k127_1274057_8 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000003757 166.0
YYD2_k127_1274057_9 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000003774 152.0
YYD2_k127_1289819_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009024 422.0
YYD2_k127_1289819_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000003871 178.0
YYD2_k127_1290887_0 Protein kinase domain K12132 - 2.7.11.1 5.796e-223 721.0
YYD2_k127_1290887_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 334.0
YYD2_k127_1290887_10 Regulator of nitric oxide reductase transcription K19339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000001072 70.0
YYD2_k127_1290887_11 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000001932 73.0
YYD2_k127_1290887_12 - - - - 0.000007489 54.0
YYD2_k127_1290887_2 Metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 329.0
YYD2_k127_1290887_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004273 323.0
YYD2_k127_1290887_4 DNA topological change K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000004515 192.0
YYD2_k127_1290887_5 - - - - 0.000000000000000000000000000000001553 135.0
YYD2_k127_1290887_6 4Fe-4S binding domain - - - 0.000000000000000000000000005878 123.0
YYD2_k127_1290887_7 PFAM YeeE YedE family (DUF395) K07112 - - 0.0000000000000000000002696 109.0
YYD2_k127_1290887_8 PFAM YeeE YedE family (DUF395) K07112 - - 0.00000000000000000001559 101.0
YYD2_k127_1290887_9 serine-type D-Ala-D-Ala carboxypeptidase activity K07259 - 3.4.16.4 0.00000000004248 67.0
YYD2_k127_1293578_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 483.0
YYD2_k127_1293578_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 395.0
YYD2_k127_1293578_2 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000002954 275.0
YYD2_k127_1293578_3 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744,K09774,K22110 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0006810,GO:0008150,GO:0008643,GO:0008645,GO:0009279,GO:0015267,GO:0015288,GO:0015749,GO:0015750,GO:0015751,GO:0015757,GO:0016020,GO:0019867,GO:0022803,GO:0022829,GO:0022857,GO:0030312,GO:0030313,GO:0031975,GO:0034219,GO:0044462,GO:0044464,GO:0046323,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:1904659 - 0.000000000000000000000000000000000000000000000000000001298 218.0
YYD2_k127_1293909_0 response to abiotic stimulus K06867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000184 252.0
YYD2_k127_1293909_1 - - - - 0.0000000000005972 79.0
YYD2_k127_12942_0 AcrB/AcrD/AcrF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 490.0
YYD2_k127_12942_1 Putative zinc-finger K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 308.0
YYD2_k127_12942_2 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000001319 193.0
YYD2_k127_12942_3 DsrE/DsrF-like family K09004 - - 0.0000000000000000000000000000000000000008462 153.0
YYD2_k127_12942_4 DGC domain - - - 0.000000000000000000000000000000000000001515 157.0
YYD2_k127_12942_5 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000002535 160.0
YYD2_k127_12942_6 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000009395 134.0
YYD2_k127_12942_7 - - - - 0.00000002291 60.0
YYD2_k127_1299773_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 624.0
YYD2_k127_1299773_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000003157 148.0
YYD2_k127_1299773_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000001037 147.0
YYD2_k127_1299773_3 - - - - 0.00000000000000000000000000000005742 136.0
YYD2_k127_1303160_0 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000005393 193.0
YYD2_k127_1303160_1 Winged helix-turn-helix DNA-binding - - - 0.000000000000000000000000000002731 128.0
YYD2_k127_1303160_2 Glycosyltransferase like family 2 - - - 0.0000000000000000000000001576 124.0
YYD2_k127_1303160_4 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) - - - 0.00000000000177 81.0
YYD2_k127_1303160_5 protein-(glutamine-N5) methyltransferase activity K00571 - 2.1.1.72 0.0000000205 68.0
YYD2_k127_1303160_6 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) - - - 0.000006199 60.0
YYD2_k127_1305590_0 Domain of unknown function (DUF5117) - - - 1.77e-299 937.0
YYD2_k127_1308421_0 Type I phosphodiesterase / nucleotide pyrophosphatase K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 410.0
YYD2_k127_1308421_1 MotA TolQ ExbB proton channel K03561,K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000009477 228.0
YYD2_k127_1308421_2 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000003682 210.0
YYD2_k127_1308421_3 TIGRFAM TonB K03832 - - 0.0000000000000000000000000000000001733 138.0
YYD2_k127_1308421_4 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.00000000000000000000001569 105.0
YYD2_k127_1308421_5 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000000000117 96.0
YYD2_k127_1314476_0 Pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.0 1083.0
YYD2_k127_1314476_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1069.0
YYD2_k127_1314476_10 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007186 292.0
YYD2_k127_1314476_11 COG1116 ABC-type nitrate sulfonate K15578 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003929 247.0
YYD2_k127_1314476_12 MOSC domain - - - 0.0000000000000000000000000000000000000000000000000000000001542 224.0
YYD2_k127_1314476_13 component I K01665,K03342,K13950 - 2.6.1.85,4.1.3.38 0.0000000000000000000000000000000000000000000000000113 186.0
YYD2_k127_1314476_14 Uncharacterised ArCR, COG2043 - - - 0.0000000000000000000000000000000000000004848 157.0
YYD2_k127_1314476_15 Rieske-like [2Fe-2S] domain K00363 - 1.7.1.15 0.0000000000000000000000000005648 120.0
YYD2_k127_1314476_16 Putative restriction endonuclease - - - 0.00000000000000000000000006032 111.0
YYD2_k127_1314476_17 Pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.000000000000005234 81.0
YYD2_k127_1314476_2 NMT1-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003229 567.0
YYD2_k127_1314476_3 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 527.0
YYD2_k127_1314476_4 COG0600 ABC-type nitrate sulfonate bicarbonate transport system permease component K15577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 345.0
YYD2_k127_1314476_5 Alginate export - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 323.0
YYD2_k127_1314476_6 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 328.0
YYD2_k127_1314476_7 ANTAR K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 313.0
YYD2_k127_1314476_8 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 303.0
YYD2_k127_1314476_9 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007628 299.0
YYD2_k127_132390_0 PFAM Integrase catalytic region - - - 0.0 1062.0
YYD2_k127_132390_1 PFAM IstB domain protein ATP-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 534.0
YYD2_k127_132390_2 PFAM IstB domain protein ATP-binding protein - - - 0.00000000000000000002389 92.0
YYD2_k127_132390_3 Multiubiquitin - - - 0.0000000000001598 69.0
YYD2_k127_1325386_0 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000005103 195.0
YYD2_k127_1325386_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000001485 164.0
YYD2_k127_1326103_0 efflux transmembrane transporter activity - - - 2.29e-298 937.0
YYD2_k127_1326103_1 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 528.0
YYD2_k127_1326103_10 Dolichyl-phosphate-mannose-protein mannosyltransferase K19302 - 3.6.1.27 0.00000000109 70.0
YYD2_k127_1326103_11 - - - - 0.00000001669 67.0
YYD2_k127_1326103_12 Alpha/beta hydrolase family - - - 0.0001368 47.0
YYD2_k127_1326103_2 Phenylalanine-4-hydroxylase K00500 GO:0003674,GO:0003824,GO:0004497,GO:0004505,GO:0006082,GO:0006520,GO:0006558,GO:0006559,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016491,GO:0016705,GO:0016714,GO:0017144,GO:0019439,GO:0019752,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902221,GO:1902222 1.14.16.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 470.0
YYD2_k127_1326103_3 Sodium:solute symporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 390.0
YYD2_k127_1326103_4 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001053 271.0
YYD2_k127_1326103_5 Sodium:solute symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000002135 238.0
YYD2_k127_1326103_6 PFAM Uncharacterised protein family (UPF0104) K07027 - - 0.000000000000000000000000000000000000000000000000002211 199.0
YYD2_k127_1326103_7 Uncharacterised protein family UPF0066 - - - 0.00000000000000000000000000000000000000000000001365 179.0
YYD2_k127_1326103_9 - - - - 0.00000000000000000000000000001084 132.0
YYD2_k127_1329455_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007603 572.0
YYD2_k127_1329455_1 Methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000003422 242.0
YYD2_k127_1345018_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006061 546.0
YYD2_k127_1345018_1 Pantothenic acid kinase K00867 GO:0003674,GO:0003824,GO:0004594,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000759 426.0
YYD2_k127_1345018_2 Tetratricopeptide TPR_2 repeat protein - - - 0.0000004558 62.0
YYD2_k127_1359122_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002217 287.0
YYD2_k127_1367616_0 Glutamate synthase central domain K00265,K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016020,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 0.0 2048.0
YYD2_k127_1367616_1 Radical SAM - - - 0.0 1126.0
YYD2_k127_1367616_10 Transposase is116 is110 is902 family K07486 - - 0.0000000000000000000000000000000000002777 147.0
YYD2_k127_1367616_11 AAA domain K02282 - - 0.000000000000000000000000000000001425 140.0
YYD2_k127_1367616_12 DDE_Tnp_1-associated - - - 0.000000000000000000000000001888 124.0
YYD2_k127_1367616_13 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000004304 91.0
YYD2_k127_1367616_2 Flavin containing amine oxidoreductase K00266 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.4.1.13,1.4.1.14 8.164e-237 740.0
YYD2_k127_1367616_3 PFAM type II secretion system protein E K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 548.0
YYD2_k127_1367616_4 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 519.0
YYD2_k127_1367616_5 ATPase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005907 408.0
YYD2_k127_1367616_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007892 323.0
YYD2_k127_1367616_7 type II secretion system K12511 - - 0.00000000000000000000000000000000000000000000000000000000000000006898 233.0
YYD2_k127_1367616_8 type II secretion system protein K12510 - - 0.00000000000000000000000000000000000000000000000000000000001821 219.0
YYD2_k127_1367616_9 Belongs to the NiCoT transporter (TC 2.A.52) family K07241 - - 0.000000000000000000000000000000000000000001903 163.0
YYD2_k127_1375872_0 TIGRFAM type VI secretion ATPase, ClpV1 family K11907 - - 0.0 1292.0
YYD2_k127_1375872_1 Rhs_assc_core RHS repeat-associated core domain protein - - - 9.845e-237 788.0
YYD2_k127_1375872_2 rhs element vgr protein K11904 - - 2.934e-201 649.0
YYD2_k127_1375872_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 440.0
YYD2_k127_1375872_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 296.0
YYD2_k127_1375872_5 - - - - 0.0000000000000000000000000000000000000000000000000000002917 201.0
YYD2_k127_1375872_6 type VI secretion protein K11895 - - 0.000000000000000000000000000000000000000000188 163.0
YYD2_k127_1375872_7 - - - - 0.0000000000000000000000000003617 122.0
YYD2_k127_1375872_8 Peptidoglycan-binding domain 1 protein - - - 0.00000000000000003936 91.0
YYD2_k127_1382847_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 488.0
YYD2_k127_1382847_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000004194 267.0
YYD2_k127_1382847_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000000000000000000001977 158.0
YYD2_k127_1383252_0 PQQ-like domain K00114 - 1.1.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009791 522.0
YYD2_k127_1383252_1 transmembrane transport - - - 0.000000000000000000000000000000000000000000000001026 177.0
YYD2_k127_1383252_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000001419 139.0
YYD2_k127_1384170_0 Maltogenic Amylase, C-terminal domain K05343 - 3.2.1.1,5.4.99.16 1.722e-267 831.0
YYD2_k127_1384170_1 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006482 582.0
YYD2_k127_1384170_10 - - - - 0.000000000005295 67.0
YYD2_k127_1384170_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 321.0
YYD2_k127_1384170_3 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 319.0
YYD2_k127_1384170_4 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000004103 268.0
YYD2_k127_1384170_5 Glycosyl transferase family 2 K21349 - 2.4.1.268 0.0000000000000000000000000000000000000000000000000000000000000000003588 244.0
YYD2_k127_1384170_6 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000005284 190.0
YYD2_k127_1384170_7 Sporulation and spore germination - - - 0.00000000000000000000008319 106.0
YYD2_k127_1384170_8 Cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0000000000000000000006934 110.0
YYD2_k127_1384170_9 Conserved TM helix - - - 0.00000000000000002249 91.0
YYD2_k127_139009_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 293.0
YYD2_k127_139009_1 - - - - 0.000000000000000000000000000000000000000000006236 169.0
YYD2_k127_139009_2 PQQ-like domain - - - 0.00000000000000000002164 95.0
YYD2_k127_139118_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 1.007e-199 653.0
YYD2_k127_139118_1 Acetyltransferase (GNAT) domain K03829 - - 0.00000000000000000000000000000000000004037 145.0
YYD2_k127_139118_2 PFAM transcriptional regulator PadR family protein - - - 0.0000000000000008414 80.0
YYD2_k127_1393901_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005301 625.0
YYD2_k127_1393901_1 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 375.0
YYD2_k127_1393901_10 PFAM peptidase U6 penicillin-insensitive murein endopeptidase K07261 - - 0.0005723 46.0
YYD2_k127_1393901_2 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008325 273.0
YYD2_k127_1393901_3 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000006599 219.0
YYD2_k127_1393901_4 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000195 207.0
YYD2_k127_1393901_5 competence protein COMEC - - - 0.00000000000000000000000000000000000000000005033 177.0
YYD2_k127_1393901_6 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000005429 167.0
YYD2_k127_1393901_7 serine-type aminopeptidase activity K02030,K14475 - - 0.0000000000000000002293 91.0
YYD2_k127_1393901_8 Papain family cysteine protease - - - 0.00000000000000005261 92.0
YYD2_k127_1393901_9 TonB dependent receptor - - - 0.00000001566 67.0
YYD2_k127_1399185_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11103 - - 1.275e-202 638.0
YYD2_k127_1399185_1 Dehydrogenase K00114 - 1.1.2.8 2.781e-196 623.0
YYD2_k127_1399185_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 576.0
YYD2_k127_1399185_3 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000002651 85.0
YYD2_k127_1399185_4 membrane K11622 - - 0.0000005353 62.0
YYD2_k127_1399185_5 Sodium/hydrogen exchanger family - - - 0.000004217 51.0
YYD2_k127_1399185_6 Anti-sigma-K factor rskA - - - 0.000005741 58.0
YYD2_k127_1399185_7 protein kinase activity - - - 0.00001923 57.0
YYD2_k127_1399185_8 Serine threonine protein K12132 - 2.7.11.1 0.000177 54.0
YYD2_k127_1399746_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 533.0
YYD2_k127_1399746_1 HpcH/HpaI aldolase/citrate lyase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 430.0
YYD2_k127_1399746_10 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000002038 117.0
YYD2_k127_1399746_11 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000007913 113.0
YYD2_k127_1399746_12 RNA polymerase K03088 - - 0.000000000000000007279 90.0
YYD2_k127_1399746_13 RDD family - - - 0.0000005949 61.0
YYD2_k127_1399746_2 Formiminotransferase-cyclodeaminase K00603,K01746,K13990 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 349.0
YYD2_k127_1399746_3 Belongs to the CinA family K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 341.0
YYD2_k127_1399746_4 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 321.0
YYD2_k127_1399746_5 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003668 310.0
YYD2_k127_1399746_6 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000646 281.0
YYD2_k127_1399746_7 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000002344 188.0
YYD2_k127_1399746_8 Ferredoxin - - - 0.000000000000000000000000000000000000000001103 160.0
YYD2_k127_1399746_9 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000002956 151.0
YYD2_k127_1401708_0 cellulose binding - - - 0.0 1079.0
YYD2_k127_1401708_1 homolog of phage Mu protein gp47 - - - 5.213e-307 964.0
YYD2_k127_1401708_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006435 310.0
YYD2_k127_1401708_11 Baseplate assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007271 278.0
YYD2_k127_1401708_12 domain, Protein K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000001025 180.0
YYD2_k127_1401708_13 - - - - 0.00000000000000000000000000000000000002331 145.0
YYD2_k127_1401708_14 - - - - 0.0000000000000000000000000000000000007722 155.0
YYD2_k127_1401708_15 Gene 25-like lysozyme K06903 - - 0.000000000000000000000000000000000001098 141.0
YYD2_k127_1401708_16 LysM domain - - - 0.0000000000000000000000000009918 123.0
YYD2_k127_1401708_17 chlorophyll binding - - - 0.00000000000000000005071 104.0
YYD2_k127_1401708_18 - - - - 0.00000005273 65.0
YYD2_k127_1401708_19 protein conserved in bacteria - - - 0.0000001308 64.0
YYD2_k127_1401708_2 homolog of phage Mu protein gp47 - - - 8.379e-307 968.0
YYD2_k127_1401708_3 Two component regulator propeller - - - 1.487e-263 833.0
YYD2_k127_1401708_4 Phage tail sheath C-terminal domain K06907 - - 2.687e-221 695.0
YYD2_k127_1401708_5 Protein of unknown function (DUF4255) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 557.0
YYD2_k127_1401708_6 Late control gene D protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009528 537.0
YYD2_k127_1401708_7 ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 470.0
YYD2_k127_1401708_8 T4-like virus tail tube protein gp19 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 329.0
YYD2_k127_1401708_9 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 339.0
YYD2_k127_1402474_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000002029 129.0
YYD2_k127_1402474_1 cAMP biosynthetic process - - - 0.000002715 56.0
YYD2_k127_1402483_0 Low affinity iron permease - - - 0.00000000000000000000000000000000000000000000001072 174.0
YYD2_k127_1402483_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000002951 143.0
YYD2_k127_1402483_2 domain protein K07260 - 3.4.17.14 0.0008754 49.0
YYD2_k127_1402586_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 550.0
YYD2_k127_1402586_1 SnoaL-like polyketide cyclase - - - 0.0000000000006878 70.0
YYD2_k127_1408992_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 376.0
YYD2_k127_1408992_1 glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008322 358.0
YYD2_k127_1408992_2 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000001873 147.0
YYD2_k127_1408992_3 Putative adhesin - - - 0.00000000000000000000000000005559 129.0
YYD2_k127_1408992_4 cytochrome C peroxidase - - - 0.000000001611 61.0
YYD2_k127_1408992_5 MacB-like periplasmic core domain - - - 0.0004295 47.0
YYD2_k127_1413124_0 - - - - 0.000000000000000000000000000000000000000000000000000000009219 211.0
YYD2_k127_1413124_1 Ricin-type beta-trefoil - - - 0.0000000000000000000000000000000002168 141.0
YYD2_k127_1413124_2 deacetylase - - - 0.00000000000000000000211 106.0
YYD2_k127_1413124_3 Glycoside Hydrolase K01183 GO:0003674,GO:0003824,GO:0004553,GO:0004568,GO:0005575,GO:0005576,GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016798,GO:0017144,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0071704,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.2.1.14 0.000000000000000002481 93.0
YYD2_k127_1413124_4 Glycosyl hydrolases family 16 - - - 0.000001283 56.0
YYD2_k127_1413124_5 Pectate lyase superfamily protein - - - 0.00004461 53.0
YYD2_k127_1413124_6 PKD domain - - - 0.0004082 44.0
YYD2_k127_1415977_0 Helix-hairpin-helix domain K04477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002701 269.0
YYD2_k127_1415977_1 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000003298 209.0
YYD2_k127_1415977_10 nucleotidase K01082 GO:0000096,GO:0000097,GO:0000103,GO:0003674,GO:0003824,GO:0004441,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0006972,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008252,GO:0008441,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009628,GO:0009651,GO:0009987,GO:0016053,GO:0016311,GO:0016312,GO:0016787,GO:0016788,GO:0016791,GO:0019752,GO:0023052,GO:0035556,GO:0042538,GO:0042578,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046030,GO:0046394,GO:0048015,GO:0048017,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052829,GO:0065007,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.7 0.000001612 50.0
YYD2_k127_1415977_11 Inositol monophosphatase family K01082,K01092 - 3.1.3.25,3.1.3.7 0.00001206 47.0
YYD2_k127_1415977_2 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine - - - 0.000000000000000000000000000000000000000000000000218 182.0
YYD2_k127_1415977_3 - - - - 0.000000000000000000000000000000000000183 146.0
YYD2_k127_1415977_4 Universal stress protein family - - - 0.00000000000000000000000000000000001398 149.0
YYD2_k127_1415977_5 AAA domain K07028 - - 0.000000000000001006 81.0
YYD2_k127_1415977_6 Flavodoxin-like fold K00355 - 1.6.5.2 0.000000000000002735 78.0
YYD2_k127_1415977_7 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.000000000000008969 81.0
YYD2_k127_1415977_8 Nitroreductase family - - - 0.00000000001049 68.0
YYD2_k127_1415977_9 SMART Transport-associated and nodulation region K04065 - - 0.000001044 56.0
YYD2_k127_1437209_0 ASPIC and UnbV - - - 1.259e-251 803.0
YYD2_k127_1437209_1 belongs to the thioredoxin family K03671,K05838 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009869 406.0
YYD2_k127_1437209_10 shikimate kinase activity K00891,K13829 - 2.7.1.71,4.2.3.4 0.0003485 46.0
YYD2_k127_1437209_2 Copper binding periplasmic protein CusF K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006654 274.0
YYD2_k127_1437209_3 SMI1 / KNR4 family - - - 0.00000000000000000000000000000000000000000000000000000000000002038 218.0
YYD2_k127_1437209_4 Domain of unknown function (DUF4160) - - - 0.00000000000000000000000000000001516 128.0
YYD2_k127_1437209_5 Protein of unknown function (DUF2442) - - - 0.0000000000000000000000001104 109.0
YYD2_k127_1437209_6 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000002757 121.0
YYD2_k127_1437209_7 Tetratricopeptide repeat - - - 0.000000000000002215 90.0
YYD2_k127_1437209_8 repeat-containing protein - - - 0.0000001797 63.0
YYD2_k127_1437209_9 von Willebrand factor (vWF) type A domain K07114,K12511 - - 0.0001232 53.0
YYD2_k127_1439091_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 571.0
YYD2_k127_1439091_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008979 467.0
YYD2_k127_1440530_0 COG0635 Coproporphyrinogen III oxidase and related Fe-S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 509.0
YYD2_k127_1440530_1 COG1541 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 383.0
YYD2_k127_1440530_2 Thioesterase superfamily K07107 - - 0.0000000000000000000001419 102.0
YYD2_k127_1440530_3 - - - - 0.00000000000001079 82.0
YYD2_k127_1444789_0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 605.0
YYD2_k127_1444789_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005498 586.0
YYD2_k127_1444789_2 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 329.0
YYD2_k127_1444789_3 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004148 316.0
YYD2_k127_1444789_4 Electron transfer flavoprotein domain K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004217 283.0
YYD2_k127_1444789_5 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0030497,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0050661,GO:0050662,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007979 277.0
YYD2_k127_1444789_6 Domain of unknown function (DUF374) K09778 - - 0.00000000000000000000000000000000000000000000277 173.0
YYD2_k127_1444789_7 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000003459 121.0
YYD2_k127_1444789_8 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000006825 100.0
YYD2_k127_1447204_0 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 500.0
YYD2_k127_1447204_1 LuxR family transcriptional regulator K07694,K11618 - - 0.000004131 53.0
YYD2_k127_1452890_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000918 265.0
YYD2_k127_1452890_1 Putative outer membrane beta-barrel porin, MtrB/PioB K22110 - - 0.0000000000000000000000000000000000001897 162.0
YYD2_k127_1467357_0 UvrD/REP helicase N-terminal domain - - - 2.095e-285 932.0
YYD2_k127_1467357_1 PD-(D/E)XK nuclease superfamily - - - 5.888e-225 735.0
YYD2_k127_1467357_10 Cytochrome C' - - - 0.00009655 52.0
YYD2_k127_1467357_2 MatE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 570.0
YYD2_k127_1467357_3 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000007625 242.0
YYD2_k127_1467357_4 - - - - 0.00000000000000000000000000000002172 132.0
YYD2_k127_1467357_5 4Fe-4S dicluster domain K05524 - - 0.00000000000000000000000005046 113.0
YYD2_k127_1467357_6 Belongs to the ClpA ClpB family K03694 - - 0.000000000000000000001016 98.0
YYD2_k127_1467357_7 CarboxypepD_reg-like domain - - - 0.00000000000000000008908 102.0
YYD2_k127_1467357_8 - - - - 0.00000000000000007083 87.0
YYD2_k127_1467357_9 - - - - 0.00003742 53.0
YYD2_k127_1473749_0 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 452.0
YYD2_k127_1473749_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004157 280.0
YYD2_k127_1473749_2 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000003152 99.0
YYD2_k127_1473749_3 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000001287 91.0
YYD2_k127_147983_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 1.666e-223 702.0
YYD2_k127_147983_1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 398.0
YYD2_k127_147983_2 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 301.0
YYD2_k127_147983_3 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000000000000000000001397 207.0
YYD2_k127_1487339_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000435 575.0
YYD2_k127_1487339_1 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008792 375.0
YYD2_k127_1487339_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 344.0
YYD2_k127_1487339_3 Peptidase C26 K07010 - - 0.00000000000000000000000000000000000000001803 168.0
YYD2_k127_1487339_4 - K02172 - - 0.000000000000000000000000000000000001887 149.0
YYD2_k127_1487339_5 Tetratricopeptide repeat - - - 0.0008932 52.0
YYD2_k127_1490338_0 PQQ-like domain K00114 - 1.1.2.8 0.00000000000000000000000000000000000000000000000000002277 195.0
YYD2_k127_1490338_1 Cytochrome c - - - 0.000000000000000000000000000000002332 142.0
YYD2_k127_1490338_2 PQQ-like domain K00117 - 1.1.5.2 0.0000000000000006559 81.0
YYD2_k127_1497760_0 Helix-turn-helix domain - - - 0.0000000000000000000000000000000001035 140.0
YYD2_k127_1497760_1 cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.0000000000000008131 87.0
YYD2_k127_1497760_3 PFAM DinB family protein - - - 0.00000000004635 69.0
YYD2_k127_1497760_4 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.00004911 54.0
YYD2_k127_1499341_0 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007338 270.0
YYD2_k127_1499341_1 D-Tyr-tRNA(Tyr) deacylase K07560 - - 0.00000000000000000000000000000000000000000000000008221 181.0
YYD2_k127_1499341_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000005165 98.0
YYD2_k127_1499341_3 - - - - 0.00000000000005381 83.0
YYD2_k127_1518877_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 2.434e-211 688.0
YYD2_k127_1518877_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 3.325e-195 644.0
YYD2_k127_1518877_10 Involved in the tonB-independent uptake of proteins - - - 0.000001357 52.0
YYD2_k127_1518877_11 Peptidase, M28 - - - 0.000003036 50.0
YYD2_k127_1518877_12 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0009065 44.0
YYD2_k127_1518877_2 Alcohol dehydrogenase GroES-like domain K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 575.0
YYD2_k127_1518877_3 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 571.0
YYD2_k127_1518877_4 Type II secretion system K12510 - - 0.00000000000000000000000000000000000000000000000000004002 199.0
YYD2_k127_1518877_5 Type II secretion system K12511 - - 0.00000000000000000000000000000000000000000000000000004654 200.0
YYD2_k127_1518877_6 PFAM type II secretion system protein E K02283,K03609 - - 0.0000000000000000000009247 96.0
YYD2_k127_1518877_7 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000003386 84.0
YYD2_k127_1518877_8 Limonene-1,2-epoxide hydrolase catalytic domain K10533 - 3.3.2.8 0.00000000002232 71.0
YYD2_k127_1518877_9 protein conserved in bacteria - - - 0.0000005997 59.0
YYD2_k127_1541274_0 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 584.0
YYD2_k127_1541274_1 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 548.0
YYD2_k127_1541274_10 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.0000000000000000000000000000000000002628 163.0
YYD2_k127_1541274_11 Cytochrome P460 - - - 0.000000000000000000000000001161 112.0
YYD2_k127_1541274_12 negative regulation of translational initiation - - - 0.00000000000000004855 86.0
YYD2_k127_1541274_13 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000001688 70.0
YYD2_k127_1541274_14 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000001325 70.0
YYD2_k127_1541274_2 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 353.0
YYD2_k127_1541274_3 Peptidoglycan-binding domain 1 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 302.0
YYD2_k127_1541274_4 Histidine-specific methyltransferase, SAM-dependent K18911 - 2.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 296.0
YYD2_k127_1541274_5 ATPases associated with a variety of cellular activities K05847 GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0031460,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0072337 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003662 295.0
YYD2_k127_1541274_6 peroxiredoxin activity K03386 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0020012,GO:0030682,GO:0042221,GO:0043207,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0051920,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0070887,GO:0075136,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000009814 240.0
YYD2_k127_1541274_7 cytochrome c biogenesis protein - - - 0.00000000000000000000000000000000000000000000000000000000258 208.0
YYD2_k127_1541274_8 Cytochrome P460 - - - 0.0000000000000000000000000000000000000000000249 164.0
YYD2_k127_1541274_9 DinB family - - - 0.0000000000000000000000000000000000000000001829 164.0
YYD2_k127_1559713_0 aspartate-tRNA(Asn) ligase activity K01876 - 6.1.1.12 8.731e-201 641.0
YYD2_k127_1559713_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006135 516.0
YYD2_k127_1559713_10 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K01489,K07042 - 3.5.4.5 0.0000000000000000005672 93.0
YYD2_k127_1559713_2 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 466.0
YYD2_k127_1559713_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 420.0
YYD2_k127_1559713_4 PhoH-like protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007031 377.0
YYD2_k127_1559713_5 Acts as a magnesium transporter K03281,K04767,K06213,K15986 GO:0000287,GO:0003674,GO:0005488,GO:0005515,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015693,GO:0030001,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0051179,GO:0051234,GO:0070838,GO:0072511 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 377.0
YYD2_k127_1559713_6 dUTPase K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007644 327.0
YYD2_k127_1559713_7 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009272 312.0
YYD2_k127_1559713_8 PFAM CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000002316 222.0
YYD2_k127_1559713_9 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.000000000000000000000000000000000000000000000000000000913 195.0
YYD2_k127_1563716_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1060.0
YYD2_k127_1563716_1 Mo-co oxidoreductase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005743 475.0
YYD2_k127_1563716_10 Alpha beta hydrolase fold-3 domain protein - - - 0.00000000000000000000000000000000000003134 149.0
YYD2_k127_1563716_11 - - - - 0.000000000000000000000003046 114.0
YYD2_k127_1563716_12 Translation initiation factor SUI1 K03113 - - 0.00000000000000000002099 103.0
YYD2_k127_1563716_13 Carboxypeptidase regulatory-like domain - - - 0.00007774 45.0
YYD2_k127_1563716_2 peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 370.0
YYD2_k127_1563716_3 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001143 245.0
YYD2_k127_1563716_4 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000002296 237.0
YYD2_k127_1563716_5 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000002646 235.0
YYD2_k127_1563716_6 YaeQ - - - 0.0000000000000000000000000000000000000000000000000000000000002889 216.0
YYD2_k127_1563716_7 to glycosidase Bacteriophage 11b gi 53748214 emb CAH56675.1 K03791 - - 0.0000000000000000000000000000000000000000000000000007949 193.0
YYD2_k127_1563716_8 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000005226 184.0
YYD2_k127_1569628_0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K00446 - 1.13.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 487.0
YYD2_k127_1569628_1 FldA protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 467.0
YYD2_k127_1569628_2 geranylgeranyl reductase activity K14257 - 1.14.19.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 305.0
YYD2_k127_1569628_3 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001318 261.0
YYD2_k127_1569628_4 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000001648 206.0
YYD2_k127_1569628_5 - - - - 0.0000000000000000000000000000000000000001631 163.0
YYD2_k127_15812_0 PQQ-like domain K00114 - 1.1.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 501.0
YYD2_k127_15812_1 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K03790,K03825,K06718 GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031248,GO:0031365,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564,GO:1902493,GO:1902494,GO:1990234 2.3.1.128,2.3.1.178 0.00000000000000000000000000000000000000000000000000000000000000000000000009234 256.0
YYD2_k127_15812_2 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000004755 222.0
YYD2_k127_15812_3 TonB-dependent receptor - - - 0.000000000000000000000000007463 128.0
YYD2_k127_15812_4 Cytochrome c - - - 0.0000000000000000000000003083 115.0
YYD2_k127_15812_5 Phosphoesterase PA-phosphatase - - - 0.0000000000000000000005754 109.0
YYD2_k127_15812_6 - - - - 0.0000000000000002844 81.0
YYD2_k127_15812_7 lactoylglutathione lyase activity - - - 0.000229 51.0
YYD2_k127_1587656_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1148.0
YYD2_k127_1587656_1 Thiamine pyrophosphate protein TPP binding domain protein K01652 - 2.2.1.6 1.639e-278 866.0
YYD2_k127_1587656_10 Tannase and feruloyl esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 493.0
YYD2_k127_1587656_11 FAD linked oxidase K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 440.0
YYD2_k127_1587656_12 PA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007348 425.0
YYD2_k127_1587656_13 PFAM glycosyl transferase family 51 K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004381 393.0
YYD2_k127_1587656_14 Aminotransferase K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003724 340.0
YYD2_k127_1587656_15 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 339.0
YYD2_k127_1587656_16 DnaJ molecular chaperone homology domain K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 311.0
YYD2_k127_1587656_17 Methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000537 298.0
YYD2_k127_1587656_18 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000303 249.0
YYD2_k127_1587656_19 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000002356 212.0
YYD2_k127_1587656_2 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 5.076e-264 822.0
YYD2_k127_1587656_20 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000004914 211.0
YYD2_k127_1587656_21 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000672 211.0
YYD2_k127_1587656_22 Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000001022 203.0
YYD2_k127_1587656_23 pfam nudix - - - 0.000000000000000000000000000000000000000000000000000001619 196.0
YYD2_k127_1587656_24 PFAM peptidase S1 and S6, chymotrypsin Hap - - - 0.000000000000000000000000000000000000000000000000008845 191.0
YYD2_k127_1587656_25 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000006369 191.0
YYD2_k127_1587656_26 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000001857 188.0
YYD2_k127_1587656_27 heme binding K08259 - 3.4.24.75 0.000000000000000000000000000000000000000000003105 175.0
YYD2_k127_1587656_28 PFAM Integral membrane protein TerC - - - 0.0000000000000000000000000000000000000000001343 168.0
YYD2_k127_1587656_29 - - - - 0.000000000000000000000000000000000000009651 158.0
YYD2_k127_1587656_3 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.785e-223 709.0
YYD2_k127_1587656_30 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000256 157.0
YYD2_k127_1587656_31 Conserved hypothetical protein 95 - - - 0.0000000000000000000000000000000000005379 148.0
YYD2_k127_1587656_32 CoA-binding protein K06929 - - 0.000000000000000000000000000000000009286 140.0
YYD2_k127_1587656_33 RNA recognition motif - - - 0.00000000000000000000000000008536 119.0
YYD2_k127_1587656_34 Zincin-like metallopeptidase K00930 - 2.7.2.8 0.00000000000000000000000002963 117.0
YYD2_k127_1587656_35 helix_turn_helix, mercury resistance K13640 - - 0.00000000000000000007914 98.0
YYD2_k127_1587656_36 Periplasmic or secreted lipoprotein - - - 0.0000000000000000001118 100.0
YYD2_k127_1587656_37 PFAM regulatory protein LuxR - - - 0.0000000000000000003296 92.0
YYD2_k127_1587656_38 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000414 99.0
YYD2_k127_1587656_39 serine threonine protein kinase - - - 0.0000000000000004394 89.0
YYD2_k127_1587656_4 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 1.174e-197 637.0
YYD2_k127_1587656_40 PFAM Iron sulphur-containing domain, CDGSH-type - - - 0.0000000000000005323 79.0
YYD2_k127_1587656_41 Cytochrome c - - - 0.000000000000001068 83.0
YYD2_k127_1587656_42 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.0000000000384 72.0
YYD2_k127_1587656_43 COG0346 Lactoylglutathione lyase and related lyases - - - 0.0000000003557 68.0
YYD2_k127_1587656_44 Domain of unknown function (DUF4390) - - - 0.00000001375 63.0
YYD2_k127_1587656_45 Protein of unknown function (DUF3738) - - - 0.00001155 48.0
YYD2_k127_1587656_46 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0001356 53.0
YYD2_k127_1587656_5 Ftsk_gamma K03466 - - 6.264e-194 630.0
YYD2_k127_1587656_6 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 580.0
YYD2_k127_1587656_7 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 557.0
YYD2_k127_1587656_8 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 491.0
YYD2_k127_1587656_9 PA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 509.0
YYD2_k127_1595086_0 membrane organization K07277,K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006425 315.0
YYD2_k127_1595086_1 peptidyl-tyrosine sulfation - - - 0.0000006359 56.0
YYD2_k127_1623064_0 Surface antigen K07277,K09800 - - 0.0000000000000000000000000000000000000000000000000005855 212.0
YYD2_k127_1644518_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 2.217e-305 949.0
YYD2_k127_1644518_1 sulphate transporter - - - 4.807e-216 685.0
YYD2_k127_1644518_2 Glucose-6-phosphate dehydrogenase, NAD binding domain K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 586.0
YYD2_k127_1644518_3 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 596.0
YYD2_k127_1648812_0 DNA topological change K03168 - 5.99.1.2 1.015e-212 689.0
YYD2_k127_1648812_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 528.0
YYD2_k127_1648812_2 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 479.0
YYD2_k127_1648812_3 ankyrin repeat K15503 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005577 450.0
YYD2_k127_1648812_4 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003594 286.0
YYD2_k127_1648812_5 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000001354 175.0
YYD2_k127_1648812_6 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000004424 154.0
YYD2_k127_1648812_7 Prolyl oligopeptidase family - - - 0.000000002177 71.0
YYD2_k127_1648812_8 Belongs to the glycosyl hydrolase 43 family - - - 0.00000536 54.0
YYD2_k127_1648812_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000007569 57.0
YYD2_k127_1652196_0 MacB-like periplasmic core domain - - - 5.283e-266 849.0
YYD2_k127_1652196_1 TonB dependent receptor - - - 1.832e-216 698.0
YYD2_k127_1652196_2 MacB-like periplasmic core domain - - - 3.587e-197 650.0
YYD2_k127_1652196_3 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 559.0
YYD2_k127_1652196_4 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 334.0
YYD2_k127_1652196_5 Protein of unknown function (DUF1207) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 313.0
YYD2_k127_1652196_6 Protein of unknown function (DUF2975) - - - 0.00000000000000000000000000000000000000000000001648 177.0
YYD2_k127_1652196_7 - - - - 0.00000000000000000000000000000000000000000003915 164.0
YYD2_k127_1652196_8 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000835 141.0
YYD2_k127_1652196_9 Transcriptional regulator K07727 - - 0.0000000000000000000000000165 115.0
YYD2_k127_1659954_0 PFAM EAL domain, GGDEF domain - - - 5.155e-228 741.0
YYD2_k127_1659954_1 PLD-like domain - - - 0.00000000000000000000000000000000002581 137.0
YYD2_k127_1665294_0 associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 550.0
YYD2_k127_1665294_1 peptidase S1 and S6, chymotrypsin Hap - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003051 300.0
YYD2_k127_1665294_2 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000004125 176.0
YYD2_k127_1665294_3 Belongs to the BI1 family K19416 - - 0.000000000000000000000000000001864 125.0
YYD2_k127_1665447_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791,K13019 - 5.1.3.14,5.1.3.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 439.0
YYD2_k127_1665447_1 PFAM SMP-30 Gluconolaconase K08685,K14274 GO:0003674,GO:0003824,GO:0004341,GO:0005488,GO:0005509,GO:0005575,GO:0005576,GO:0005975,GO:0005996,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016051,GO:0016053,GO:0016787,GO:0016788,GO:0019752,GO:0019852,GO:0019853,GO:0042364,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046364,GO:0046394,GO:0046872,GO:0051186,GO:0051188,GO:0052689,GO:0071704,GO:1901576 1.4.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 425.0
YYD2_k127_1665447_2 PFAM DegT DnrJ EryC1 StrS aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 381.0
YYD2_k127_1665447_3 PFAM oxidoreductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 352.0
YYD2_k127_1665447_4 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 342.0
YYD2_k127_1665447_5 transferase hexapeptide K13018 - 2.3.1.201 0.000000000000000000000000000000000000000000000000000000000000000000489 237.0
YYD2_k127_1665447_6 Glycosyl transferase, family 2 K00721,K01912,K08301 - 2.4.1.83,6.2.1.30 0.00000000000000000000000000000000000000004729 163.0
YYD2_k127_1665447_7 - - - - 0.00000000000000000000000007254 110.0
YYD2_k127_1665447_8 response to abiotic stimulus K06867 - - 0.0000000000000000000006154 98.0
YYD2_k127_1665447_9 Tricorn protease homolog K08676 - - 0.00000000001161 78.0
YYD2_k127_1670936_0 formaldehyde-activating enzyme K10713 - 4.2.1.147 0.00000000000000000000000000000000000000000001542 163.0
YYD2_k127_1670936_1 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000005139 151.0
YYD2_k127_1670936_2 - - - - 0.00000000007262 69.0
YYD2_k127_1674549_0 SRP54-type protein, GTPase domain K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 474.0
YYD2_k127_1674549_1 - - - - 0.0000000000000000000000000000002347 136.0
YYD2_k127_1674549_2 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 GO:0008150,GO:0040007 - 0.00000000000000000000000000161 121.0
YYD2_k127_1674549_3 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000002872 109.0
YYD2_k127_1674549_4 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000079 87.0
YYD2_k127_1674549_5 Ferredoxin - - - 0.000000000000001599 77.0
YYD2_k127_1674549_6 KH domain - - - 0.000000000001793 75.0
YYD2_k127_16751_0 PFAM Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004541 435.0
YYD2_k127_16751_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 391.0
YYD2_k127_16751_2 Alcohol dehydrogenase zinc-binding domain protein K00001 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 339.0
YYD2_k127_16751_3 PFAM Adenosine AMP deaminase K01488 - 3.5.4.4 0.00000000000000000000000000000000000000000000000007444 182.0
YYD2_k127_16751_4 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000006038 179.0
YYD2_k127_16751_5 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000001644 125.0
YYD2_k127_16751_6 - - - - 0.000000000000000000003563 105.0
YYD2_k127_1678304_0 HELICc2 K03722 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 545.0
YYD2_k127_1678304_1 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000007344 209.0
YYD2_k127_1678304_2 tetratricopeptide repeat - - - 0.0001137 53.0
YYD2_k127_1678304_3 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0005937 52.0
YYD2_k127_1700700_0 Glycogen debranching enzyme - - - 0.0 1550.0
YYD2_k127_1700700_1 regulation of DNA-templated transcription, elongation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006844 514.0
YYD2_k127_1700700_11 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000002245 102.0
YYD2_k127_1700700_12 Outer membrane protein beta-barrel domain - - - 0.000000001652 62.0
YYD2_k127_1700700_13 - - - - 0.0000259 53.0
YYD2_k127_1700700_2 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 526.0
YYD2_k127_1700700_4 Mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000904 322.0
YYD2_k127_1700700_5 sirohydrochlorin cobaltochelatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 298.0
YYD2_k127_1700700_6 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000103 277.0
YYD2_k127_1700700_7 translation initiation factor activity K06996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001348 252.0
YYD2_k127_1700700_8 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.00000000000000000000000000000000000000000000000000000001218 210.0
YYD2_k127_1700700_9 Peptidase MA superfamily - - - 0.0000000000000000000000000000000129 141.0
YYD2_k127_1704346_0 response to heat K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000103 274.0
YYD2_k127_1704346_1 response to copper ion K01187,K16915 - 3.2.1.20 0.000000000000000000000000000000000000000000001481 179.0
YYD2_k127_1704346_2 PFAM Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.00000000000000000000000000008162 131.0
YYD2_k127_1704346_3 - - - - 0.000000000000000000000008579 112.0
YYD2_k127_1704346_4 - - - - 0.00000000000000000003521 99.0
YYD2_k127_170992_0 gluconolactonase activity K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 434.0
YYD2_k127_170992_1 Carboxylesterase family - - - 0.000000000000000000000000000000001532 137.0
YYD2_k127_1713876_0 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000000106 220.0
YYD2_k127_1713876_1 Belongs to the glycosyl hydrolase 43 family - - - 0.000000000000000000000000000000004197 149.0
YYD2_k127_1713876_2 - - - - 0.0000000000000000000000000000001013 139.0
YYD2_k127_1713876_3 Domain of unknown function (DUF4142) K08995 - - 0.00000000000000000002751 103.0
YYD2_k127_1713876_4 Cold shock protein domain - - - 0.0000000000000002184 83.0
YYD2_k127_1713876_5 Glycosyl hydrolases family 43 - - - 0.000000009947 58.0
YYD2_k127_1713876_6 Multicopper oxidase K00368,K07233,K22349 - 1.16.3.3,1.7.2.1 0.00009733 46.0
YYD2_k127_1713876_7 oxidoreductase activity K00337,K03333,K04771,K07114 - 1.1.3.6,1.6.5.3,3.4.21.107 0.0002207 45.0
YYD2_k127_1713876_8 Protein of unknown function (DUF3014) - - - 0.0003703 43.0
YYD2_k127_1715489_0 Tannase and feruloyl esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 474.0
YYD2_k127_1715489_1 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 348.0
YYD2_k127_1715489_2 Protein of unknown function (DUF1211) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003573 279.0
YYD2_k127_1715489_3 Twin-arginine translocation pathway signal protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005381 253.0
YYD2_k127_1715489_4 electron transport chain K00347,K03614,K21163 - 1.6.5.8 0.000000000000000000000000000000000000000000000001347 177.0
YYD2_k127_1715489_5 Carboxypeptidase regulatory-like domain - - - 0.000003809 59.0
YYD2_k127_1718776_0 Molecular chaperone. Has ATPase activity K04079 - - 5.066e-302 937.0
YYD2_k127_1718776_1 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008137 352.0
YYD2_k127_1718776_2 - - - - 0.000000000000002205 85.0
YYD2_k127_1718776_3 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.00000001093 59.0
YYD2_k127_1718776_4 Glyoxalase-like domain - - - 0.00000001727 66.0
YYD2_k127_1718776_5 DinB family - - - 0.000007176 55.0
YYD2_k127_1719240_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 590.0
YYD2_k127_1719240_1 Isocitrate/isopropylmalate dehydrogenase K07246 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003862,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006108,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009027,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0019752,GO:0036094,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046553,GO:0046872,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.83,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006529 505.0
YYD2_k127_1719240_10 Squalene/phytoene synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001076 250.0
YYD2_k127_1719240_11 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000006205 241.0
YYD2_k127_1719240_12 squalene-associated FAD-dependent desaturase K21677 - 1.17.8.1 0.00000000000000000000000000000000000000000000000000000000000000001631 244.0
YYD2_k127_1719240_13 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000001474 195.0
YYD2_k127_1719240_14 thiolester hydrolase activity K06889 - - 0.00000000000000000000000000000000000000087 167.0
YYD2_k127_1719240_15 Belongs to the GcvT family K06980 - - 0.000000000000000000000000000000000002076 159.0
YYD2_k127_1719240_16 NUDIX domain K03574,K03575 - 3.6.1.55 0.00000000000000000000001769 115.0
YYD2_k127_1719240_2 symporter activity K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 402.0
YYD2_k127_1719240_3 tRNA thio-modification K03151 GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005727 388.0
YYD2_k127_1719240_4 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K11381 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003739 389.0
YYD2_k127_1719240_5 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 331.0
YYD2_k127_1719240_6 PFAM peptidase S58, DmpA K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007933 329.0
YYD2_k127_1719240_7 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004827 304.0
YYD2_k127_1719240_8 FES K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 299.0
YYD2_k127_1719240_9 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000528 273.0
YYD2_k127_1724755_0 Acyl-CoA dehydrogenase, C-terminal domain K16173 - 1.3.99.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006134 513.0
YYD2_k127_1724755_1 GDP-mannose 4,6 dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008253 470.0
YYD2_k127_1724755_10 methyltransferase - - - 0.000000000003996 75.0
YYD2_k127_1724755_11 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000005674 59.0
YYD2_k127_1724755_12 S-layer homology domain - - - 0.0000004968 62.0
YYD2_k127_1724755_13 Tetratricopeptide repeat - - - 0.0004015 53.0
YYD2_k127_1724755_2 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 419.0
YYD2_k127_1724755_3 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 416.0
YYD2_k127_1724755_4 Bacterial sugar transferase K03606 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 424.0
YYD2_k127_1724755_5 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 379.0
YYD2_k127_1724755_6 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008583 355.0
YYD2_k127_1724755_7 Major facilitator superfamily K08161 - - 0.00000000000000000000000000000000000000000000009818 185.0
YYD2_k127_1724755_8 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000001109 129.0
YYD2_k127_1724755_9 CDP-alcohol phosphatidyltransferase K00995,K08744 - 2.7.8.41,2.7.8.5 0.000000000000000000000000000003379 126.0
YYD2_k127_1726092_0 Pyrrolo-quinoline quinone K00117 - 1.1.5.2 1.619e-251 796.0
YYD2_k127_1726092_1 Winged helix DNA-binding domain K09927 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003887 511.0
YYD2_k127_1726092_2 - K02172 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 385.0
YYD2_k127_1726092_3 Trehalose utilisation K09992 - - 0.000000000000000000000000000000000000000000000000000000000003165 217.0
YYD2_k127_1726092_5 - - - - 0.0000000000003407 79.0
YYD2_k127_1726092_6 - - - - 0.00000001116 63.0
YYD2_k127_1731883_0 protein conserved in bacteria - - - 2.731e-267 837.0
YYD2_k127_1731883_1 Belongs to the IlvD Edd family K01687 - 4.2.1.9 2.469e-205 664.0
YYD2_k127_1731883_2 Protein of unknown function (DUF521) K09123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 531.0
YYD2_k127_1731883_3 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 474.0
YYD2_k127_1731883_4 Ankyrin repeats (many copies) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 308.0
YYD2_k127_1731883_5 Protein of unknown function DUF126 K09128 - - 0.000000000000000000000000000000000000000000000000000004915 196.0
YYD2_k127_1731883_6 protein conserved in bacteria - - - 0.00003896 54.0
YYD2_k127_1736382_0 ABC transporter transmembrane region K11085 - - 9.115e-293 911.0
YYD2_k127_1736382_1 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008641 507.0
YYD2_k127_1736382_10 Dehydrogenase K00117 - 1.1.5.2 0.00000000000000000000000000000000000000001708 158.0
YYD2_k127_1736382_11 BON domain K04065 - - 0.000000000000000000000000000134 124.0
YYD2_k127_1736382_12 Haem-degrading - - - 0.00000000000000000000000002395 117.0
YYD2_k127_1736382_13 PFAM Tetratricopeptide repeat - - - 0.000000003972 68.0
YYD2_k127_1736382_14 SnoaL-like domain - - - 0.000000005534 65.0
YYD2_k127_1736382_15 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000008941 58.0
YYD2_k127_1736382_16 cell adhesion involved in biofilm formation K20276 - - 0.000009576 56.0
YYD2_k127_1736382_2 glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003677 436.0
YYD2_k127_1736382_3 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 388.0
YYD2_k127_1736382_4 transcription factor binding K02584,K12146,K12266,K15836,K21009 GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0001150,GO:0001158,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035326,GO:0042802,GO:0043170,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2000142,GO:2000144,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008966 387.0
YYD2_k127_1736382_5 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000646 374.0
YYD2_k127_1736382_6 Alpha beta hydrolase K00433 - 1.11.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001575 307.0
YYD2_k127_1736382_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001118 254.0
YYD2_k127_1736382_8 lactoylglutathione lyase activity K03088 - - 0.000000000000000000000000000000000000000000000000000000000001908 222.0
YYD2_k127_1736382_9 Dimerisation domain - - - 0.000000000000000000000000000000000000000000001067 179.0
YYD2_k127_1741602_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006095 460.0
YYD2_k127_1741602_1 helix_turn_helix gluconate operon transcriptional repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 353.0
YYD2_k127_1741602_2 Mismatch repair ATPase (MutS family) - - - 0.000002366 53.0
YYD2_k127_1767540_0 oxidoreductase activity - - - 1.704e-258 819.0
YYD2_k127_1767540_1 Carboxypeptidase regulatory-like domain - - - 3.609e-252 799.0
YYD2_k127_1772651_0 PFAM LmbE family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 540.0
YYD2_k127_1772651_1 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 463.0
YYD2_k127_1772651_2 Polysaccharide biosynthesis protein K01784,K02473 - 5.1.3.2,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 379.0
YYD2_k127_1772651_3 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K13599 - - 0.00000000000000000000000003857 111.0
YYD2_k127_1772651_5 Domain of unknown function (DUF4382) - - - 0.00000000000007295 79.0
YYD2_k127_1772651_6 - - - - 0.000000001542 61.0
YYD2_k127_1793638_0 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007636 320.0
YYD2_k127_1793638_1 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001305 286.0
YYD2_k127_1793638_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000005706 248.0
YYD2_k127_1793638_3 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000001619 168.0
YYD2_k127_1793638_4 RF-1 domain K15034 - - 0.000000000000000000000000007827 124.0
YYD2_k127_1806745_0 PFAM Peptidase M19, renal dipeptidase K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 351.0
YYD2_k127_1806745_1 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000797 335.0
YYD2_k127_1806745_2 Belongs to the peptidase S8 family K12287 - - 0.00000000000000000000000000000000000000000000000000000000004395 235.0
YYD2_k127_1806745_3 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.00000000003403 64.0
YYD2_k127_1840228_0 - - - - 0.00000000000000000000000000000001751 130.0
YYD2_k127_1840228_1 - - - - 0.0000000000000000000004067 108.0
YYD2_k127_1840228_2 - - - - 0.00000000000000000002257 102.0
YYD2_k127_1840228_3 Acetyltransferase (GNAT) family - - - 0.000000000000000004823 95.0
YYD2_k127_1840228_4 - - - - 0.000000000002325 78.0
YYD2_k127_1840228_5 - - - - 0.0000000009077 66.0
YYD2_k127_1840228_6 Metallo-beta-lactamase superfamily - - - 0.0003509 52.0
YYD2_k127_1859630_0 AcrB/AcrD/AcrF family - - - 1.884e-309 974.0
YYD2_k127_1859630_1 Major facilitator superfamily K08167 - - 1.128e-197 632.0
YYD2_k127_1859630_10 helix_turn_helix, Lux Regulon - - - 0.0000004119 54.0
YYD2_k127_1859630_11 - - - - 0.000006351 53.0
YYD2_k127_1859630_12 methyltransferase - - - 0.0003166 44.0
YYD2_k127_1859630_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 366.0
YYD2_k127_1859630_3 - - - - 0.00000000000000000000000000000000000000000001721 169.0
YYD2_k127_1859630_4 - - - - 0.00000000000000000000000003642 111.0
YYD2_k127_1859630_5 Cupin - - - 0.00000000000000000000000008521 113.0
YYD2_k127_1859630_6 pyridoxamine 5-phosphate - - - 0.0000000000000000002679 100.0
YYD2_k127_1859630_7 SnoaL-like domain - - - 0.000000000000000001024 91.0
YYD2_k127_1859630_9 Protein kinase domain K12132 - 2.7.11.1 0.00000001333 61.0
YYD2_k127_1860329_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002801 328.0
YYD2_k127_1860329_1 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000000000000000000000000000000000008868 194.0
YYD2_k127_1860329_2 - - - - 0.0000000000000000000000005653 117.0
YYD2_k127_1860329_3 WD40-like Beta Propeller Repeat - - - 0.00000000002528 64.0
YYD2_k127_1877449_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 8.441e-208 679.0
YYD2_k127_1877449_1 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 588.0
YYD2_k127_1877449_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 550.0
YYD2_k127_1877449_3 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009276 387.0
YYD2_k127_1877449_4 Xylose isomerase-like TIM barrel K01816 - 5.3.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000005123 261.0
YYD2_k127_1877449_5 Histidine kinase-like ATPase domain K01338,K04757,K06379,K08282,K17752 - 2.7.11.1,3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000003755 234.0
YYD2_k127_1877449_6 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000000000000000007335 93.0
YYD2_k127_1884836_0 MmgE PrpD family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 323.0
YYD2_k127_1884836_1 PFAM TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000005146 134.0
YYD2_k127_1888215_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007691 533.0
YYD2_k127_1888215_1 PBP superfamily domain K05772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001294 274.0
YYD2_k127_1888215_2 PFAM binding-protein-dependent transport systems inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000000000000006235 214.0
YYD2_k127_1888215_3 Part of the ABC transporter complex FbpABC involved in Fe(3 ) ions import. Responsible for energy coupling to the transport system K02010 - 3.6.3.30 0.0000000000000000000000000000000004946 149.0
YYD2_k127_1888215_4 PFAM Tannase and feruloyl esterase - - - 0.000000000000005973 79.0
YYD2_k127_1888327_0 AcrB/AcrD/AcrF family K03296 - - 4.397e-244 790.0
YYD2_k127_1888327_1 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007991 370.0
YYD2_k127_1888327_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000004311 246.0
YYD2_k127_1888327_3 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000001178 156.0
YYD2_k127_1888327_4 Involved in the tonB-independent uptake of proteins - - - 0.0000000001528 64.0
YYD2_k127_1889022_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 3.911e-198 640.0
YYD2_k127_1889022_1 Aminotransferase class-III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005042 566.0
YYD2_k127_1889022_2 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004513 262.0
YYD2_k127_1889022_3 metal-dependent hydrolase with the TIM-barrel fold - - - 0.00000000000000000000000000000000000000000000000000002076 195.0
YYD2_k127_1889022_4 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000000000000000000000000000000000001969 196.0
YYD2_k127_1889022_5 imidazolonepropionase activity - - - 0.0000272 48.0
YYD2_k127_1892645_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 2.479e-211 686.0
YYD2_k127_1892645_1 competence protein COMEC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004645 371.0
YYD2_k127_1892645_10 Putative cyclase - - - 0.000000000004089 73.0
YYD2_k127_1892645_11 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000006833 62.0
YYD2_k127_1892645_12 - - - - 0.0000179 53.0
YYD2_k127_1892645_2 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 333.0
YYD2_k127_1892645_3 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 312.0
YYD2_k127_1892645_4 DNA topological change - - - 0.00000000000000000000000000000000000000000000000001228 186.0
YYD2_k127_1892645_5 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000008304 141.0
YYD2_k127_1892645_6 PFAM Ankyrin repeat K06867 - - 0.0000000000000000000000000000001688 142.0
YYD2_k127_1892645_7 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000057 123.0
YYD2_k127_1892645_8 AraC-like ligand binding domain - - - 0.000000000000000000000107 104.0
YYD2_k127_1892645_9 YjbR - - - 0.000000000000000000007513 96.0
YYD2_k127_1893849_0 Histidine kinase - - - 1.556e-259 831.0
YYD2_k127_1893849_1 Epoxide hydrolase N terminus K01253,K21159 - 3.3.2.9 6.741e-228 715.0
YYD2_k127_1893849_2 Cytochrome P460 - - - 0.0000000000000000000001099 101.0
YYD2_k127_1894900_0 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 455.0
YYD2_k127_1894900_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 350.0
YYD2_k127_1894900_2 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000002167 237.0
YYD2_k127_1894900_3 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000003535 207.0
YYD2_k127_1894900_4 Dystroglycan-type cadherin-like domains. - - - 0.00000000000001695 83.0
YYD2_k127_1894900_5 cellulase activity - - - 0.0000000003033 70.0
YYD2_k127_1894900_6 cellulase activity K20276 - - 0.00000817 57.0
YYD2_k127_1902576_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1086.0
YYD2_k127_1902576_1 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003251 426.0
YYD2_k127_1902576_2 Flavodoxin-like fold K00355 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002327 278.0
YYD2_k127_1902576_3 - - - - 0.000000000000000000000000000000000000000006931 162.0
YYD2_k127_1902576_4 phosphatase activity - - - 0.000000009632 63.0
YYD2_k127_1902576_5 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0001072 53.0
YYD2_k127_1904472_0 Heat shock 70 kDa protein K04043 - - 1.946e-299 930.0
YYD2_k127_1904472_1 Transglycosylase K05366 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042546,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 578.0
YYD2_k127_1904472_10 Transcriptional regulator, MerR family K13640 GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000002116 153.0
YYD2_k127_1904472_11 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000005311 56.0
YYD2_k127_1904472_12 - - - - 0.0000004926 57.0
YYD2_k127_1904472_13 Sporulation related domain - - - 0.00002828 54.0
YYD2_k127_1904472_2 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007772 462.0
YYD2_k127_1904472_3 polysaccharide catabolic process K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 428.0
YYD2_k127_1904472_4 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 411.0
YYD2_k127_1904472_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 312.0
YYD2_k127_1904472_6 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 315.0
YYD2_k127_1904472_7 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007071 303.0
YYD2_k127_1904472_8 GTPase activity K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002021 246.0
YYD2_k127_1904472_9 IstB-like ATP binding protein K02315 - - 0.0000000000000000000000000000000000000000000000000004507 194.0
YYD2_k127_1924994_0 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 494.0
YYD2_k127_1924994_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 456.0
YYD2_k127_1924994_10 positive regulation of macromolecule biosynthetic process K03973 - - 0.0000000000000008479 84.0
YYD2_k127_1924994_11 PFAM AsmA family K07289 - - 0.0000000002091 73.0
YYD2_k127_1924994_2 PFAM NAD-dependent epimerase dehydratase K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 430.0
YYD2_k127_1924994_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 431.0
YYD2_k127_1924994_4 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 396.0
YYD2_k127_1924994_5 Transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 313.0
YYD2_k127_1924994_6 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000002776 211.0
YYD2_k127_1924994_7 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000001921 198.0
YYD2_k127_1924994_8 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000000000000000000007435 173.0
YYD2_k127_1924994_9 Domain of unknown function (DUF4112) - - - 0.00000000000000000000000000000003774 133.0
YYD2_k127_1943353_0 B12 binding domain - - - 2.594e-238 747.0
YYD2_k127_1943353_1 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 505.0
YYD2_k127_1943353_2 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 432.0
YYD2_k127_1943353_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 405.0
YYD2_k127_1943353_4 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 329.0
YYD2_k127_1943353_5 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000001108 138.0
YYD2_k127_1947466_0 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000001966 225.0
YYD2_k127_1947466_1 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.000000000000000000000000000000000000000000000000000000005801 201.0
YYD2_k127_1947466_2 L-lactate permease K03303 - - 0.000000000000000000000000000000000000000000000000000001146 196.0
YYD2_k127_1947466_3 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.0004455 46.0
YYD2_k127_194749_0 4-oxalomesaconate hydratase K10220 - 4.2.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004396 518.0
YYD2_k127_194749_1 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006631 485.0
YYD2_k127_194749_2 ribonuclease inhibitor activity K10218 - 4.1.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 329.0
YYD2_k127_194749_3 PFAM TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000001787 136.0
YYD2_k127_1949607_0 SPFH domain-Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008286 522.0
YYD2_k127_1949607_1 PQQ-like domain K05889 - 1.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 538.0
YYD2_k127_1949607_2 tRNA wobble cytosine modification - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 440.0
YYD2_k127_1949607_3 Tannase and feruloyl esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003248 442.0
YYD2_k127_1949607_4 phosphinothricin N-acetyltransferase activity K03825 - - 0.0000000000000000000000000000000000000000000000000000000000000007729 227.0
YYD2_k127_1949607_5 Putative restriction endonuclease - - - 0.000000000000000000000000000000000000000000000000000000005941 205.0
YYD2_k127_1949607_6 Transcription factor zinc-finger - - - 0.000000000000000000000000000000000000001214 156.0
YYD2_k127_1949607_7 YjbR - - - 0.0000000000000000000000000000000001001 136.0
YYD2_k127_1949607_8 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000002137 118.0
YYD2_k127_1949607_9 - - - - 0.0000000000000000008024 97.0
YYD2_k127_1953066_0 PFAM sigma-70 region 2 domain protein K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008384 543.0
YYD2_k127_1953066_1 - - - - 0.00000000000000000000000000000000000000000000000018 188.0
YYD2_k127_1953066_2 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000189 172.0
YYD2_k127_1953066_3 - - - - 0.000000000000000000000000000000000000000000001107 185.0
YYD2_k127_1953066_4 - - - - 0.00000000000000000000000000000000000000001206 157.0
YYD2_k127_1955971_0 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 606.0
YYD2_k127_1955971_1 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 537.0
YYD2_k127_1955971_10 - - - - 0.00000000000000000000000000000000000000001018 170.0
YYD2_k127_1955971_11 - - - - 0.00000000000000000000000000000000002549 145.0
YYD2_k127_1955971_12 PIN domain - - - 0.0000000000000000123 87.0
YYD2_k127_1955971_13 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000007042 70.0
YYD2_k127_1955971_2 MmgE PrpD family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 531.0
YYD2_k127_1955971_3 Transporter, DASS family K11106,K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004905 475.0
YYD2_k127_1955971_4 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 359.0
YYD2_k127_1955971_5 HpcH/HpaI aldolase/citrate lyase family K08691 - 4.1.3.24,4.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006432 324.0
YYD2_k127_1955971_6 hydro-lyase, Fe-S type, tartrate fumarate subfamily, alpha subunit K01677 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 301.0
YYD2_k127_1955971_7 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006073 279.0
YYD2_k127_1955971_8 N-terminal half of MaoC dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006284 269.0
YYD2_k127_1955971_9 Fumarase C-terminus K01678 - 4.2.1.2 0.000000000000000000000000000000000000000000002226 173.0
YYD2_k127_1960265_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009405,GO:0009605,GO:0009607,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030312,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0035821,GO:0036094,GO:0040007,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043207,GO:0043492,GO:0043952,GO:0044003,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0050896,GO:0051179,GO:0051234,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052564,GO:0052572,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0075136,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 4.398e-212 680.0
YYD2_k127_1960265_1 COG0076 Glutamate decarboxylase and related PLP-dependent K01593 - 4.1.1.105,4.1.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004473 578.0
YYD2_k127_1960265_10 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000001497 164.0
YYD2_k127_1960265_11 alpha beta - - - 0.0000000000000000000000004452 122.0
YYD2_k127_1960265_12 TIGRFAM TonB family K03832 - - 0.00000000000000002238 93.0
YYD2_k127_1960265_13 Methyltransferase - - - 0.000000000000007717 84.0
YYD2_k127_1960265_14 - - - - 0.00000002101 59.0
YYD2_k127_1960265_15 - - - - 0.000000132 63.0
YYD2_k127_1960265_2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 521.0
YYD2_k127_1960265_3 Cupin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 516.0
YYD2_k127_1960265_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005246 485.0
YYD2_k127_1960265_5 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005557 389.0
YYD2_k127_1960265_6 N-acetylglucosaminylinositol deacetylase activity K22135 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009328 291.0
YYD2_k127_1960265_7 c-di-gmp phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000595 282.0
YYD2_k127_1960265_8 - - - - 0.0000000000000000000000000000000000000000000000000000000002128 209.0
YYD2_k127_1960265_9 Histidine kinase - - - 0.000000000000000000000000000000000000000000000002809 193.0
YYD2_k127_1965250_0 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000001349 227.0
YYD2_k127_1965250_1 - - - - 0.000000000000000000000000000007281 128.0
YYD2_k127_1965250_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00001767 57.0
YYD2_k127_1965487_0 PFAM Mechanosensitive ion channel K03442 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 348.0
YYD2_k127_1965487_1 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.000000002486 64.0
YYD2_k127_1965487_2 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.000001469 53.0
YYD2_k127_19759_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 8.795e-258 805.0
YYD2_k127_19759_1 Aminomethyltransferase folate-binding domain K15064 - - 4.191e-242 753.0
YYD2_k127_19759_10 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 310.0
YYD2_k127_19759_11 ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 297.0
YYD2_k127_19759_12 PFAM SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008859 250.0
YYD2_k127_19759_13 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000000002685 209.0
YYD2_k127_19759_14 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000002028 218.0
YYD2_k127_19759_15 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000002616 190.0
YYD2_k127_19759_16 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000717 192.0
YYD2_k127_19759_17 Bacterial-like globin K06886 - - 0.00000000000000000000000000000000000000000000004902 173.0
YYD2_k127_19759_18 Penicillinase repressor - - - 0.000000000000000000000000000000000505 134.0
YYD2_k127_19759_19 - K01286 - 3.4.16.4 0.0000000000000000000000000000000006758 149.0
YYD2_k127_19759_2 Uncharacterised MFS-type transporter YbfB K05548,K05819,K08195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 502.0
YYD2_k127_19759_21 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000009235 109.0
YYD2_k127_19759_22 Tetratricopeptide repeat - - - 0.000000000000000000000004196 117.0
YYD2_k127_19759_23 protein involved in tolerance to divalent cations K03926 - - 0.0000000000000000000000191 105.0
YYD2_k127_19759_24 - - - - 0.00000000000000000000004002 108.0
YYD2_k127_19759_25 - - - - 0.00000000000000004585 94.0
YYD2_k127_19759_26 negative regulation of translational initiation - - - 0.0000000000000002251 84.0
YYD2_k127_19759_27 AAA ATPase domain - - - 0.0000000003702 72.0
YYD2_k127_19759_28 energy transducer activity - - - 0.000000001022 71.0
YYD2_k127_19759_29 Ferric siderophore transporter, periplasmic energy transduction protein TonB K03832 - - 0.000000001022 71.0
YYD2_k127_19759_3 Histidine ammonia-lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 502.0
YYD2_k127_19759_31 DNA ligase D, 3'-phosphoesterase domain - - - 0.00002691 50.0
YYD2_k127_19759_32 Septum formation initiator - - - 0.00005667 50.0
YYD2_k127_19759_4 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004212 503.0
YYD2_k127_19759_5 Cys Met metabolism K01739,K01758 - 2.5.1.48,4.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 473.0
YYD2_k127_19759_6 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 469.0
YYD2_k127_19759_7 Oxidoreductase molybdopterin binding domain K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 377.0
YYD2_k127_19759_8 Integrase core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 331.0
YYD2_k127_19759_9 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 321.0
YYD2_k127_1976645_0 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 396.0
YYD2_k127_1976645_1 PFAM TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000005251 156.0
YYD2_k127_1989730_0 PQQ-like domain K00117 - 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 613.0
YYD2_k127_1989730_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009956 327.0
YYD2_k127_1989730_2 - - - - 0.00000000000000000000000000000000000000008357 164.0
YYD2_k127_1989730_3 - - - - 0.00000000000000000008174 102.0
YYD2_k127_1989730_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K01607 - 4.1.1.44 0.0000001066 62.0
YYD2_k127_1989730_5 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.000001522 51.0
YYD2_k127_1989730_6 MacB-like periplasmic core domain - - - 0.000002702 50.0
YYD2_k127_2006960_0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 K00341 - 1.6.5.3 1.268e-197 636.0
YYD2_k127_2006960_1 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 557.0
YYD2_k127_2006960_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00000000000000000000000000000000000000001218 159.0
YYD2_k127_2006960_11 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 - 1.6.5.3 0.0000000000000000000000000000000000003705 143.0
YYD2_k127_2006960_12 2 iron, 2 sulfur cluster binding K00334,K00335 - 1.6.5.3 0.0000000000000000000000000000000000005029 159.0
YYD2_k127_2006960_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000000000401 124.0
YYD2_k127_2006960_14 plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000000000002524 112.0
YYD2_k127_2006960_15 - - - - 0.00000000132 66.0
YYD2_k127_2006960_16 Transcriptional regulatory protein, C terminal - - - 0.000005772 51.0
YYD2_k127_2006960_17 Transcriptional regulatory protein, C terminal - - - 0.0003154 51.0
YYD2_k127_2006960_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00334,K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 505.0
YYD2_k127_2006960_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003653 452.0
YYD2_k127_2006960_4 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007676 444.0
YYD2_k127_2006960_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000874 384.0
YYD2_k127_2006960_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005947 363.0
YYD2_k127_2006960_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000004753 240.0
YYD2_k127_2006960_8 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000005464 185.0
YYD2_k127_2006960_9 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000009145 173.0
YYD2_k127_2020268_0 TonB-dependent receptor - - - 0.00000000000000000000000000002779 136.0
YYD2_k127_202305_0 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 4.432e-222 703.0
YYD2_k127_202305_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000074 608.0
YYD2_k127_202305_10 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.00000000005887 65.0
YYD2_k127_202305_11 PFAM PEGA domain - - - 0.00001652 57.0
YYD2_k127_202305_2 ABC transporter K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006912 616.0
YYD2_k127_202305_3 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006805 540.0
YYD2_k127_202305_4 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 437.0
YYD2_k127_202305_5 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 317.0
YYD2_k127_202305_6 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005715 280.0
YYD2_k127_202305_7 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000005475 252.0
YYD2_k127_202305_8 PFAM ATP-binding region, ATPase domain protein K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000000001611 190.0
YYD2_k127_202305_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000001429 157.0
YYD2_k127_2052500_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006871 406.0
YYD2_k127_2052500_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 321.0
YYD2_k127_2052500_2 Belongs to the TPP enzyme family K01576,K01652 - 2.2.1.6,4.1.1.7 0.000000000000000000000000000000000000000000000000000002825 194.0
YYD2_k127_2052500_3 Cytochrome c K17760 - 1.1.9.1 0.0000000000315 73.0
YYD2_k127_2062837_0 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 499.0
YYD2_k127_2062837_1 component I K01665 - 2.6.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 416.0
YYD2_k127_2062837_10 Amidohydrolase family - - - 0.000000000000000000000000000000000000000003339 167.0
YYD2_k127_2062837_11 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000009598 160.0
YYD2_k127_2062837_12 - - - - 0.000000000000000000000000003366 121.0
YYD2_k127_2062837_13 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000002267 82.0
YYD2_k127_2062837_14 Transposase IS200 like - - - 0.0000008539 55.0
YYD2_k127_2062837_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 377.0
YYD2_k127_2062837_3 ATPase activity K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006147 268.0
YYD2_k127_2062837_4 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004318 261.0
YYD2_k127_2062837_5 PFAM glutamine amidotransferase class-I K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000003887 238.0
YYD2_k127_2062837_6 Amidohydrolase family K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000003702 241.0
YYD2_k127_2062837_7 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000000000000000000007794 180.0
YYD2_k127_2062837_8 Putative restriction endonuclease - - - 0.0000000000000000000000000000000000000000000000005606 181.0
YYD2_k127_2062837_9 Protein of unknown function (DUF447) K09154 - - 0.0000000000000000000000000000000000000000000000006929 184.0
YYD2_k127_2069901_0 Integrase core domain - - - 8.461e-213 671.0
YYD2_k127_2069901_1 Bacterial dnaA protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 381.0
YYD2_k127_2069901_2 Bacterial protein of unknown function (DUF922) - - - 0.0000000000000000000000001015 115.0
YYD2_k127_2069901_3 transposase IS116 IS110 IS902 family K07486 - - 0.000000000000000000001363 100.0
YYD2_k127_2069901_4 transposase IS116 IS110 IS902 family - - - 0.0000000001344 63.0
YYD2_k127_2073016_0 PFAM Molybdopterin dehydrogenase, FAD-binding K11178 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 451.0
YYD2_k127_2073016_1 formate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002151 270.0
YYD2_k127_2116001_0 PFAM Pyrrolo-quinoline quinone K00117 - 1.1.5.2 0.0000000000000000000000000000000000000000000000000002198 198.0
YYD2_k127_2116001_1 WD40 domain protein beta Propeller - - - 0.000000000000001054 81.0
YYD2_k127_2116001_2 SnoaL-like polyketide cyclase - - - 0.00000000003291 70.0
YYD2_k127_2116001_3 STAS domain - - - 0.00001192 52.0
YYD2_k127_2122181_0 Belongs to the peptidase M16 family K07263 - - 2.735e-318 1002.0
YYD2_k127_2122181_1 Trehalose utilisation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000848 395.0
YYD2_k127_2122181_2 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000001422 219.0
YYD2_k127_2122181_4 Protein of unknown function, DUF - - - 0.000000000000000000000000000000000000000004037 159.0
YYD2_k127_2122181_5 - - - - 0.000000000000000000000000000000000003048 151.0
YYD2_k127_2122181_6 Putative inner membrane exporter, YdcZ K09936 - - 0.00000000000000000000000005042 116.0
YYD2_k127_2122181_7 - - - - 0.0000000000000000000000007207 108.0
YYD2_k127_2125777_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 489.0
YYD2_k127_2125777_1 protein catabolic process K03420,K13525,K17681 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 400.0
YYD2_k127_2125777_2 - - - - 0.0000000000000000000000005273 115.0
YYD2_k127_2125777_3 - - - - 0.000000000000000000005493 106.0
YYD2_k127_2125777_4 MacB-like periplasmic core domain - - - 0.000000008607 63.0
YYD2_k127_21364_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 4.922e-278 874.0
YYD2_k127_21364_1 Peptidoglycan-binding domain 1 protein K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 299.0
YYD2_k127_21364_2 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000001994 237.0
YYD2_k127_21364_3 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000004376 159.0
YYD2_k127_21364_4 TonB-dependent receptor - - - 0.00000000000000000000000000000000000004813 157.0
YYD2_k127_21364_5 An anti-sigma factor for extracytoplasmic function (ECF) sigma factor SigK. ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut extracytoplasmically (site-1 protease, S1P), then within the membrane itself (site-2 protease, S2P, Rip1), while cytoplasmic proteases finish degrading the regulatory protein, liberating the sigma factor - - - 0.00000000000000008467 93.0
YYD2_k127_2147590_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC - - - 1.78e-231 732.0
YYD2_k127_2147590_1 - - - - 0.000000000000000000000000000000000000000000000000000000000004025 215.0
YYD2_k127_2147590_2 lipoprotein transporter activity K02003 - - 0.00000000000000000000000000000000000000000000000000000000002386 222.0
YYD2_k127_2147590_3 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000002421 187.0
YYD2_k127_2147590_4 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000003826 181.0
YYD2_k127_2147590_5 Haem-binding domain - - - 0.000000000000000000000000000000000000000000003829 168.0
YYD2_k127_2147590_6 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000006758 149.0
YYD2_k127_2147590_8 - - - - 0.00000000000000000001328 106.0
YYD2_k127_2147590_9 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000005855 86.0
YYD2_k127_2154138_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 1.956e-217 704.0
YYD2_k127_2155465_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 7.181e-218 686.0
YYD2_k127_2155465_1 PFAM beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 413.0
YYD2_k127_2155465_10 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.00000000000000000000000000000003369 130.0
YYD2_k127_2155465_11 Predicted membrane protein (DUF2306) - - - 0.00000000000000000000000000000003959 133.0
YYD2_k127_2155465_12 Domain of unknown function (DU1801) - - - 0.0000000000000000000009247 100.0
YYD2_k127_2155465_2 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 419.0
YYD2_k127_2155465_3 PFAM ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004632 267.0
YYD2_k127_2155465_4 2Fe-2S -binding domain protein K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000008403 236.0
YYD2_k127_2155465_5 tRNA wobble adenosine to inosine editing - - - 0.00000000000000000000000000000000000000000000000000000000000000000741 237.0
YYD2_k127_2155465_6 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000009297 224.0
YYD2_k127_2155465_7 2OG-Fe(II) oxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000003309 192.0
YYD2_k127_2155465_8 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000000001572 169.0
YYD2_k127_2155465_9 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000001694 163.0
YYD2_k127_2160762_0 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007963 259.0
YYD2_k127_2160762_1 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000006006 227.0
YYD2_k127_2160762_2 phosphorelay signal transduction system - - - 0.000000000006902 70.0
YYD2_k127_2164619_0 DNA topological change K03168 - 5.99.1.2 1.327e-201 656.0
YYD2_k127_2164619_1 - - - - 0.000000000000000000000000000002645 131.0
YYD2_k127_2164651_0 Belongs to the glycosyl hydrolase 28 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 408.0
YYD2_k127_2164651_1 Fumarylacetoacetate (FAA) hydrolase K14259 - 4.2.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000003583 267.0
YYD2_k127_2168993_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 1.724e-217 694.0
YYD2_k127_2168993_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000001085 186.0
YYD2_k127_2168993_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000001918 196.0
YYD2_k127_2168993_3 PFAM peptidase - - - 0.0000000000000000000000003082 118.0
YYD2_k127_2168993_4 bacterial (prokaryotic) histone like domain K03530 - - 0.0000000000000000000002033 100.0
YYD2_k127_2178826_0 signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 369.0
YYD2_k127_2178826_1 - - - - 0.000000000000000000000000000000000000000000004503 171.0
YYD2_k127_2178826_2 metal-dependent hydrolase with the TIM-barrel fold - - - 0.000000000000000000000000002002 117.0
YYD2_k127_2178826_3 - - - - 0.000000000000000000002141 103.0
YYD2_k127_2185064_0 Glutamine synthetase type III K01915 - 6.3.1.2 1.274e-282 887.0
YYD2_k127_2185064_1 glutamine synthetase K01915 - 6.3.1.2 5.145e-223 702.0
YYD2_k127_2185064_2 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 377.0
YYD2_k127_2185064_3 Domain of Unknown Function (DUF349) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004377 315.0
YYD2_k127_2185064_4 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000669 197.0
YYD2_k127_2189456_0 MacB-like periplasmic core domain - - - 6.034e-235 751.0
YYD2_k127_2189456_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 455.0
YYD2_k127_2189456_10 Protein of unknown function (DUF962) - - - 0.00000000000000000000000209 103.0
YYD2_k127_2189456_11 - - - - 0.000000000000000000000009133 111.0
YYD2_k127_2189456_12 - - - - 0.00000000000000000000001684 106.0
YYD2_k127_2189456_13 efflux transmembrane transporter activity K02004 - - 0.00000000000000003491 87.0
YYD2_k127_2189456_14 - - - - 0.00000002354 62.0
YYD2_k127_2189456_16 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000002107 64.0
YYD2_k127_2189456_17 Membrane - - - 0.000001665 54.0
YYD2_k127_2189456_2 Belongs to the HpcH HpaI aldolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 368.0
YYD2_k127_2189456_3 Phosphoenolpyruvate phosphomutase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005059 349.0
YYD2_k127_2189456_4 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009068 327.0
YYD2_k127_2189456_5 extracellular solute-binding protein, family 1 K22003 - 5.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000003203 269.0
YYD2_k127_2189456_6 Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.000000000000000000000000000000000000000000000105 173.0
YYD2_k127_2189456_7 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000001697 141.0
YYD2_k127_2189456_8 - - - - 0.000000000000000000000000000002795 131.0
YYD2_k127_2189456_9 CHRD domain - - - 0.00000000000000000000000000009277 122.0
YYD2_k127_2211003_0 Predicted membrane protein (DUF2339) - - - 5.169e-249 811.0
YYD2_k127_2211003_1 PFAM AMP-dependent synthetase and ligase K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 567.0
YYD2_k127_2211003_10 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07712 - - 0.00002815 56.0
YYD2_k127_2211003_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 - 6.1.1.17,6.1.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 464.0
YYD2_k127_2211003_3 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007045 445.0
YYD2_k127_2211003_4 spore germination - - - 0.00000000000000000000000000000000000000000000000000000000005323 217.0
YYD2_k127_2211003_5 TIGRFAM nicotinamide mononucleotide transporter PnuC K03811 - - 0.00000000000000000000000000000000000000000000000003331 185.0
YYD2_k127_2211003_6 AAA domain - - - 0.0000000000000000000000000000000000000000000000002566 181.0
YYD2_k127_2211003_7 - - - - 0.000000000000000000000000000000000000001412 156.0
YYD2_k127_2211003_8 - - - - 0.0000001274 62.0
YYD2_k127_2211003_9 Astacin (Peptidase family M12A) - - - 0.0000007324 60.0
YYD2_k127_2218784_1 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 293.0
YYD2_k127_2220060_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 532.0
YYD2_k127_2220060_1 RNA polymerase recycling family C-terminal K03580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 334.0
YYD2_k127_2222105_0 DNA topological change - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 572.0
YYD2_k127_2222105_1 Carboxylesterase family K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 397.0
YYD2_k127_2222105_2 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000001723 227.0
YYD2_k127_2222105_3 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000003678 179.0
YYD2_k127_2224717_0 FAD linked oxidase domain protein - - - 2.605e-234 754.0
YYD2_k127_2224717_1 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 401.0
YYD2_k127_2224717_2 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003394 285.0
YYD2_k127_2224717_3 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000003018 271.0
YYD2_k127_2224717_4 23S rRNA-intervening sequence protein - - - 0.0000000000628 68.0
YYD2_k127_2233484_0 GGDEF domain K13590 - 2.7.7.65 0.000000002986 61.0
YYD2_k127_2233484_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0001259 48.0
YYD2_k127_2233484_2 PEGA domain - - - 0.0003863 53.0
YYD2_k127_2239827_0 Putative zinc binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 525.0
YYD2_k127_2239827_1 CDP-glucose 4,6-dehydratase K01709 - 4.2.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 473.0
YYD2_k127_2239827_2 Nucleotidyl transferase K00978 - 2.7.7.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 414.0
YYD2_k127_2239827_3 Wzt C-terminal domain K09691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 413.0
YYD2_k127_2239827_4 NAD-dependent epimerase dehydratase K19180 - 1.1.1.339 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 320.0
YYD2_k127_2239827_5 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005778 248.0
YYD2_k127_2239827_6 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000004267 233.0
YYD2_k127_2239827_7 - - - - 0.00000000000000000000000000000000006127 150.0
YYD2_k127_2239827_8 ABC-2 type transporter K09690 - - 0.0000000000000002375 90.0
YYD2_k127_224116_0 metal-dependent hydrolase of the K07045,K14333,K15063,K20941 - 4.1.1.103,4.1.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 426.0
YYD2_k127_224116_1 - - - - 0.000000000000000000000002273 111.0
YYD2_k127_224116_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.000000000000000000000003386 107.0
YYD2_k127_224116_3 peptidyl-tyrosine sulfation K13992 - - 0.000000000000000000001321 104.0
YYD2_k127_224116_4 - - - - 0.00000227 58.0
YYD2_k127_2246732_0 PQQ-like domain - - - 9.373e-211 670.0
YYD2_k127_2246732_1 Tannase and feruloyl esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006621 467.0
YYD2_k127_2246732_2 Protein of unknown function (DUF3738) K02172 - - 0.00000000000000000000000000000000000001424 158.0
YYD2_k127_2246732_3 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000001406 135.0
YYD2_k127_2246732_4 - - - - 0.000000000000000000003043 98.0
YYD2_k127_225371_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 541.0
YYD2_k127_225371_1 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 379.0
YYD2_k127_225371_2 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000005954 256.0
YYD2_k127_225371_3 Belongs to the HpcH HpaI aldolase family K00979,K01630,K02510 - 2.7.7.38,4.1.2.20,4.1.2.52 0.0000000000000000000000000000000000000000000000000000000000000000000006616 243.0
YYD2_k127_225371_4 aminotransferase class I and II K10907 - - 0.0000000000000000000000000000000000000000000000000000000005445 216.0
YYD2_k127_225371_5 - - - - 0.0000000000000000000000000000000000000000000000000006866 198.0
YYD2_k127_225371_6 Psort location CytoplasmicMembrane, score K19225 - 3.4.21.105 0.000000000000000006313 97.0
YYD2_k127_2261737_0 Carboxypeptidase regulatory-like domain - - - 1.805e-290 921.0
YYD2_k127_2261737_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 6.786e-248 784.0
YYD2_k127_2261737_2 Endoribonuclease L-PSP K09022 GO:0003674,GO:0003824,GO:0016787,GO:0019239 3.5.99.10 0.00000000000000000000000000000000000001344 152.0
YYD2_k127_2261737_3 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000001768 93.0
YYD2_k127_2261737_4 TPR Domain containing protein K12600 - - 0.000003565 57.0
YYD2_k127_2261874_0 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00171,K03737 - 1.2.7.1 0.0 2038.0
YYD2_k127_2261874_1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01576,K01652 - 2.2.1.6,4.1.1.7 5.491e-215 687.0
YYD2_k127_2261874_2 Cys-tRNA(Pro) hydrolase activity K19055 - - 0.00000000000000000000000000007888 123.0
YYD2_k127_2261874_3 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000003058 72.0
YYD2_k127_2265485_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 1.18e-221 698.0
YYD2_k127_2265485_1 PFAM NADH Ubiquinone plastoquinone (complex I) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 537.0
YYD2_k127_2265485_10 carboxylic ester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001271 288.0
YYD2_k127_2265485_11 NADH dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001686 269.0
YYD2_k127_2265485_12 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004001 265.0
YYD2_k127_2265485_13 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005672 259.0
YYD2_k127_2265485_14 Hydrogenase 4 membrane K12140 - - 0.000000000000000000000000000000000000000001365 165.0
YYD2_k127_2265485_15 DNA-templated transcription, initiation K03088,K07263 - - 0.0000000000000000000000000000000000000003817 157.0
YYD2_k127_2265485_16 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000008732 136.0
YYD2_k127_2265485_17 ArsR family transcriptional regulator - - - 0.000000000000000000000000000000001801 132.0
YYD2_k127_2265485_18 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000009346 147.0
YYD2_k127_2265485_19 Calcium/calmodulin dependent protein kinase II association domain - - - 0.00000000000000000000000000000006031 137.0
YYD2_k127_2265485_2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 517.0
YYD2_k127_2265485_21 - - - - 0.0000000000000004545 90.0
YYD2_k127_2265485_22 - - - - 0.0000000006594 68.0
YYD2_k127_2265485_23 Protein of unknown function (DUF3341) - - - 0.000000002796 65.0
YYD2_k127_2265485_24 Acetyltransferase (GNAT) domain - - - 0.0000001528 55.0
YYD2_k127_2265485_25 - - - - 0.000003916 59.0
YYD2_k127_2265485_3 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006546 514.0
YYD2_k127_2265485_4 PFAM NADH Ubiquinone plastoquinone (complex I) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 491.0
YYD2_k127_2265485_5 Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 416.0
YYD2_k127_2265485_6 plastoquinone (Complex I) K12141 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 367.0
YYD2_k127_2265485_7 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 339.0
YYD2_k127_2265485_8 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004672 318.0
YYD2_k127_2265485_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001308 298.0
YYD2_k127_2272327_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1234.0
YYD2_k127_2272327_1 - - - - 1.853e-201 653.0
YYD2_k127_2272327_10 PFAM Chlorite dismutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006651 268.0
YYD2_k127_2272327_11 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000006015 239.0
YYD2_k127_2272327_12 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000000000000002332 233.0
YYD2_k127_2272327_13 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000001024 238.0
YYD2_k127_2272327_14 high-affinity ferrous iron transmembrane transporter activity K07243 - - 0.0000000000000000000000000000000000000000000000000005393 193.0
YYD2_k127_2272327_15 Membrane - - - 0.00000000000000000000000000000000000006208 156.0
YYD2_k127_2272327_16 PFAM regulatory protein, MarR - - - 0.0000000000000000000000000006682 120.0
YYD2_k127_2272327_17 PFAM Xylose isomerase - - - 0.0000000000000000000002054 108.0
YYD2_k127_2272327_18 DNA-sulfur modification-associated - - - 0.00000000000000000004529 102.0
YYD2_k127_2272327_19 PFAM OsmC family protein K07397 - - 0.000000000000000000293 92.0
YYD2_k127_2272327_2 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008042 582.0
YYD2_k127_2272327_20 PFAM Acetyltransferase (GNAT) family K00619 - 2.3.1.1 0.0000000347 58.0
YYD2_k127_2272327_21 domain protein - - - 0.000001519 59.0
YYD2_k127_2272327_22 Domain of unknown function (DUF4115) K15539 - - 0.0001453 51.0
YYD2_k127_2272327_3 Amino acid kinase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 514.0
YYD2_k127_2272327_4 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620,K00930 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35,2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 347.0
YYD2_k127_2272327_5 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004942 344.0
YYD2_k127_2272327_6 Biotin-lipoyl like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 294.0
YYD2_k127_2272327_7 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001366 289.0
YYD2_k127_2272327_8 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001625 293.0
YYD2_k127_2272327_9 Belongs to the UPF0271 (lamB) family K07160 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002279 272.0
YYD2_k127_2284613_0 Predicted membrane protein (DUF2157) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 300.0
YYD2_k127_2284613_1 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000002802 223.0
YYD2_k127_2284613_2 PFAM SMP-30 Gluconolaconase LRE-like region K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000452 177.0
YYD2_k127_2284613_3 Phosphatidylethanolamine-binding protein - - - 0.000000000000000000000000000000000002303 146.0
YYD2_k127_2284613_4 - - - - 0.00000000000000000000000001891 116.0
YYD2_k127_2284613_5 PFAM SMP-30 Gluconolaconase - - - 0.00003046 49.0
YYD2_k127_2296259_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1112.0
YYD2_k127_2296259_1 protein kinase activity K08884 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 524.0
YYD2_k127_2296259_10 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000003279 176.0
YYD2_k127_2296259_11 WHG domain - - - 0.000000000000000002079 100.0
YYD2_k127_2296259_12 Vitamin K-dependent gamma-carboxylase - - - 0.000000000005754 71.0
YYD2_k127_2296259_13 - - - - 0.000000002064 63.0
YYD2_k127_2296259_14 guanyl-nucleotide exchange factor activity - - - 0.00004178 57.0
YYD2_k127_2296259_2 PFAM glycosyl transferase family 51 K05366,K21464 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 439.0
YYD2_k127_2296259_3 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004249 400.0
YYD2_k127_2296259_4 Pyridoxal phosphate biosynthetic protein PdxA K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.000000000000000000000000000000000000000000000000000000000000000000000000000001909 271.0
YYD2_k127_2296259_5 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000003603 201.0
YYD2_k127_2296259_6 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000001337 194.0
YYD2_k127_2296259_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000001563 187.0
YYD2_k127_2296259_8 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008830,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016853,GO:0016854,GO:0016857,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0045226,GO:0046379,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.1.3.13 0.00000000000000000000000000000000000000000000002237 184.0
YYD2_k127_2296259_9 DNA polymerase III K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000002514 174.0
YYD2_k127_2304161_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 4.367e-319 990.0
YYD2_k127_2304161_1 L-lactate permease K03303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008561 521.0
YYD2_k127_2304161_2 Cytochrome b(C-terminal)/b6/petD K00412 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 414.0
YYD2_k127_2304161_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000295 224.0
YYD2_k127_2304161_4 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000006389 218.0
YYD2_k127_2304161_5 Rieske [2Fe-2S] domain K03886 - - 0.000000000000000000000000001787 117.0
YYD2_k127_2304161_6 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000004284 83.0
YYD2_k127_2305581_0 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000001191 146.0
YYD2_k127_2305581_1 - - - - 0.0000000003606 69.0
YYD2_k127_2309876_0 Protein of unknown function (DUF1587) - - - 6.545e-215 692.0
YYD2_k127_2309876_1 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 537.0
YYD2_k127_2309876_10 Von Willebrand factor type A domain K07114 - - 0.00000000000004056 84.0
YYD2_k127_2309876_11 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.00000000005646 70.0
YYD2_k127_2309876_12 AraC family transcriptional regulator - - - 0.00000000008929 71.0
YYD2_k127_2309876_13 Protein of unknown function DUF58 - - - 0.00000001258 68.0
YYD2_k127_2309876_14 von Willebrand factor, type A K07114 - - 0.0000004691 61.0
YYD2_k127_2309876_2 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 503.0
YYD2_k127_2309876_3 ankyrin repeat K15503 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 477.0
YYD2_k127_2309876_4 glucose sorbosone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 324.0
YYD2_k127_2309876_5 Di-haem oxidoreductase, putative peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 306.0
YYD2_k127_2309876_6 COG0714 MoxR-like ATPases K03924 - - 0.0000000000000000000000000000000000000000000000002755 189.0
YYD2_k127_2309876_7 ASCH - - - 0.00000000000000000000000000000000000000002439 154.0
YYD2_k127_2309876_8 - - - - 0.00000000000000000005409 97.0
YYD2_k127_2309876_9 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000001686 85.0
YYD2_k127_2318227_0 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 460.0
YYD2_k127_2318227_1 Bacterial regulatory proteins, tetR family - - - 0.00000000000003885 80.0
YYD2_k127_2323246_0 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006897 332.0
YYD2_k127_2323246_1 Catalyzes the hydrolysis of methenyl-H(4)MPT( ) to 5- formyl-H(4)MPT K01499 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009987,GO:0015947,GO:0016787,GO:0016810,GO:0016814,GO:0018759,GO:0019238,GO:0043446,GO:0044237,GO:0044424,GO:0044464,GO:0071704 3.5.4.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 324.0
YYD2_k127_2323246_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001814 258.0
YYD2_k127_2328341_0 Neutral/alkaline non-lysosomal ceramidase, N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 600.0
YYD2_k127_2332452_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 8.087e-206 675.0
YYD2_k127_2332452_1 Polysaccharide lyase family 4, domain II - - - 0.0000000000000000000000000000000000000000000000000000000004971 210.0
YYD2_k127_2332452_2 alcohol dehydrogenase K00121 - 1.1.1.1,1.1.1.284 0.0000000000000000000000000000000000000000000000001329 196.0
YYD2_k127_2332452_3 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000006849 178.0
YYD2_k127_2332452_4 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549,K22363 - 2.1.1.14,4.4.1.23 0.00000000000007494 74.0
YYD2_k127_2352500_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1108.0
YYD2_k127_2352500_1 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000009377 262.0
YYD2_k127_2352500_2 Cobalamin B12-binding K01849 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000005045 201.0
YYD2_k127_2352500_3 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000002821 154.0
YYD2_k127_2352500_4 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.000000000000000000000000000000002255 132.0
YYD2_k127_2368596_0 Carbohydrate family 9 binding domain-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005774 622.0
YYD2_k127_2368596_1 Peptidase, M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 546.0
YYD2_k127_2368596_2 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005298 438.0
YYD2_k127_2368596_3 Peptidase, M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005817 416.0
YYD2_k127_2368596_4 Peptidase, M61 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007288 284.0
YYD2_k127_2368596_5 PFAM Asparaginase K01424 - 3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000001721 231.0
YYD2_k127_2368596_6 methyltransferase activity K02169 - 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000583 206.0
YYD2_k127_2368596_7 DinB family - - - 0.000000000000000000000000004941 116.0
YYD2_k127_2368596_8 Glycosyl transferase, family 2 - - - 0.00000000000000000000000001409 124.0
YYD2_k127_2369970_0 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 322.0
YYD2_k127_2369970_1 PFAM TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000001315 128.0
YYD2_k127_2386668_0 PQQ-like domain K00114 - 1.1.2.8 3.069e-207 657.0
YYD2_k127_2386668_1 Gentisate 1,2-dioxygenase K00450 - 1.13.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 475.0
YYD2_k127_2386668_2 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006436 493.0
YYD2_k127_2386668_3 Sugar (and other) transporter K08195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009887 445.0
YYD2_k127_2386668_4 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002985 388.0
YYD2_k127_2386668_5 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004751 381.0
YYD2_k127_2386668_6 Catalyzes the conversion of maleate to fumarate K01799 - 5.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 352.0
YYD2_k127_2386668_7 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000002248 199.0
YYD2_k127_2386668_8 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000006039 161.0
YYD2_k127_2394460_0 ABC transporter K06158 GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0050896 - 1.253e-280 869.0
YYD2_k127_2394460_1 TonB-dependent receptor K02014 - - 3.383e-200 655.0
YYD2_k127_2394460_2 TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 586.0
YYD2_k127_2394460_3 Ankyrin repeats (many copies) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 575.0
YYD2_k127_2394460_4 beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 415.0
YYD2_k127_2394460_5 COG2199 FOG GGDEF domain - - - 0.00000000000000000000000000000000001123 143.0
YYD2_k127_2398676_0 - - - - 1.459e-205 656.0
YYD2_k127_2398676_1 FHA Domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002188 286.0
YYD2_k127_2398676_2 AhpC/TSA family - - - 0.00000000000000000000000000000000000000000000000000000002982 200.0
YYD2_k127_2405205_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 343.0
YYD2_k127_2405205_1 C4-type zinc ribbon domain K07164 - - 0.0000000000000000000000000000000004514 140.0
YYD2_k127_2405205_2 Reverse transcriptase-like K03469 - 3.1.26.4 0.00000000000001263 77.0
YYD2_k127_2405513_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 452.0
YYD2_k127_2405513_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 430.0
YYD2_k127_2405513_10 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000000000007939 132.0
YYD2_k127_2405513_11 PFAM O-methyltransferase - - - 0.000000000000000000000000001669 119.0
YYD2_k127_2405513_12 Necessary for formate dehydrogenase activity K02380 - - 0.0000000000000000001144 102.0
YYD2_k127_2405513_13 oxidoreductase activity - - - 0.000000000000001018 90.0
YYD2_k127_2405513_14 protein histidine kinase activity - - - 0.00000000000006017 78.0
YYD2_k127_2405513_2 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 380.0
YYD2_k127_2405513_3 Belongs to the N(4) N(6)-methyltransferase family K00571,K00590 - 2.1.1.113,2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 342.0
YYD2_k127_2405513_4 Arginase family K01476 - 3.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 306.0
YYD2_k127_2405513_5 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000004183 182.0
YYD2_k127_2405513_6 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000003337 150.0
YYD2_k127_2405513_7 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000001064 154.0
YYD2_k127_2405513_8 Belongs to the peptidase S11 family K07262 - - 0.0000000000000000000000000000000000008989 154.0
YYD2_k127_2405513_9 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000003074 134.0
YYD2_k127_2421317_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 1.571e-217 693.0
YYD2_k127_2421317_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009076 322.0
YYD2_k127_2421317_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 331.0
YYD2_k127_2430360_0 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 299.0
YYD2_k127_2430360_1 phospholipase Carboxylesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002586 267.0
YYD2_k127_2430360_2 Major Facilitator Superfamily - - - 0.0000000000008515 78.0
YYD2_k127_2432791_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 374.0
YYD2_k127_2432791_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000001059 146.0
YYD2_k127_2432791_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000006207 153.0
YYD2_k127_2432791_3 - - - - 0.0000000000000000000000005311 116.0
YYD2_k127_2434514_0 Belongs to the ClpA ClpB family K03696 - - 3.952e-290 908.0
YYD2_k127_2434514_1 Aminotransferase K14267,K14287 - 2.6.1.17,2.6.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000643 377.0
YYD2_k127_2434514_10 RNA recognition motif - - - 0.0000000000000001566 88.0
YYD2_k127_2434514_11 Lysylphosphatidylglycerol synthase TM region - - - 0.00000007179 64.0
YYD2_k127_2434514_12 23S rRNA-intervening sequence protein - - - 0.000000512 58.0
YYD2_k127_2434514_2 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 304.0
YYD2_k127_2434514_3 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001192 283.0
YYD2_k127_2434514_4 tRNA synthetases class I (E and Q), catalytic domain K01894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005081 276.0
YYD2_k127_2434514_5 Aminotransferase K14267,K14287 - 2.6.1.17,2.6.1.88 0.0000000000000000000000000000000000000000000000000000000000002511 214.0
YYD2_k127_2434514_6 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000004905 157.0
YYD2_k127_2434514_7 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0050896,GO:0051087 - 0.0000000000000000000000000000061 121.0
YYD2_k127_2434514_8 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.000000000000000000000000003801 121.0
YYD2_k127_2434514_9 - - - - 0.0000000000000000001549 99.0
YYD2_k127_2434601_0 PFAM Prolyl oligopeptidase family - - - 4.957e-232 735.0
YYD2_k127_2434601_1 cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 443.0
YYD2_k127_2434601_10 - - - - 0.00000000000000016 90.0
YYD2_k127_2434601_11 - - - - 0.0000000000000003778 85.0
YYD2_k127_2434601_12 Lysophospholipase L1-like esterase - - - 0.00003361 54.0
YYD2_k127_2434601_13 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 - - 0.0008312 51.0
YYD2_k127_2434601_2 transmembrane transporter activity K03535,K08194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 424.0
YYD2_k127_2434601_3 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 374.0
YYD2_k127_2434601_4 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000531 323.0
YYD2_k127_2434601_5 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002312 283.0
YYD2_k127_2434601_6 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000001476 235.0
YYD2_k127_2434601_7 G/U mismatch-specific uracil-DNA glycosylase activity K01934,K03649 GO:0000700,GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008263,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.28,6.3.3.2 0.000000000000000000000000000000000000000000002318 171.0
YYD2_k127_2434601_8 peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.0000000000000000000000000000000008703 135.0
YYD2_k127_2434601_9 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000002467 121.0
YYD2_k127_2434619_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.194e-266 833.0
YYD2_k127_2434619_1 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008249 615.0
YYD2_k127_2434619_2 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 333.0
YYD2_k127_2434619_3 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001341 263.0
YYD2_k127_2434619_4 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000000000001063 198.0
YYD2_k127_2434619_5 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000006053 199.0
YYD2_k127_2434619_6 - - - - 0.000000000000000000000000000009149 131.0
YYD2_k127_2434619_7 Putative zinc-finger - - - 0.00000000000000000000001348 112.0
YYD2_k127_2450055_0 DNA topological change K03168 - 5.99.1.2 8.821e-231 744.0
YYD2_k127_2450055_1 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 436.0
YYD2_k127_2450055_2 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 412.0
YYD2_k127_2450055_3 PFAM Ankyrin repeat K06867 - - 0.00000000000000000000000000000000000000000002607 180.0
YYD2_k127_2450055_4 Cytochrome C and Quinol oxidase polypeptide I - - - 0.00000000000000000000000000000001656 132.0
YYD2_k127_2450055_5 Aminotransferase class I and II K00835 - 2.6.1.66 0.000000000002571 70.0
YYD2_k127_2450055_6 Protein tyrosine kinase K12132 - 2.7.11.1 0.0004131 46.0
YYD2_k127_2451787_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 3.132e-233 733.0
YYD2_k127_2451787_1 amino acid K03294 - - 1.681e-211 666.0
YYD2_k127_2451787_10 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 329.0
YYD2_k127_2451787_11 pilus assembly protein K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033 323.0
YYD2_k127_2451787_12 PFAM DAHP synthetase I KDSA K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 313.0
YYD2_k127_2451787_13 Type ii and iii secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 326.0
YYD2_k127_2451787_14 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001994 286.0
YYD2_k127_2451787_15 DNA polymerase X family K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008748 279.0
YYD2_k127_2451787_16 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000006008 268.0
YYD2_k127_2451787_17 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000184 250.0
YYD2_k127_2451787_18 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000003889 210.0
YYD2_k127_2451787_19 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.00000000000000000000000000000000000000000000002767 187.0
YYD2_k127_2451787_2 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006479 610.0
YYD2_k127_2451787_20 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000006277 177.0
YYD2_k127_2451787_21 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000561 164.0
YYD2_k127_2451787_22 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0000166,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0004140,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019103,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032551,GO:0032552,GO:0032553,GO:0032554,GO:0032557,GO:0032558,GO:0032564,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000000000002464 165.0
YYD2_k127_2451787_23 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000007276 147.0
YYD2_k127_2451787_24 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000001289 126.0
YYD2_k127_2451787_25 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000003369 118.0
YYD2_k127_2451787_26 protein contain chitin-binding domain type 3 K01183,K21606 - 3.2.1.14,3.2.1.202 0.00000000000000000001503 103.0
YYD2_k127_2451787_27 FR47-like protein K18816 - 2.3.1.82 0.00000000000000000001932 92.0
YYD2_k127_2451787_28 PFAM Pilus assembly protein PilO K02664 - - 0.0000000000000000004221 94.0
YYD2_k127_2451787_3 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 455.0
YYD2_k127_2451787_31 PFAM Photosynthetic reaction centre cytochrome C subunit K13992 - - 0.000000000000005689 82.0
YYD2_k127_2451787_32 peptidyl-tyrosine sulfation - - - 0.0000000000000471 86.0
YYD2_k127_2451787_33 Fimbrial assembly protein (PilN) K02663 - - 0.00000000000009002 79.0
YYD2_k127_2451787_34 Tetratricopeptide repeat - - - 0.00000000000138 74.0
YYD2_k127_2451787_36 - - - - 0.0003293 49.0
YYD2_k127_2451787_4 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00850,K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005768 403.0
YYD2_k127_2451787_5 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 385.0
YYD2_k127_2451787_6 Secretin and TonB N terminus short domain K02666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 373.0
YYD2_k127_2451787_7 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 349.0
YYD2_k127_2451787_8 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004238 337.0
YYD2_k127_2451787_9 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009171 335.0
YYD2_k127_2451899_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009055,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0022900,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006103 311.0
YYD2_k127_2451899_1 - - - - 0.00000000000000000000000000000000000000000000005625 179.0
YYD2_k127_2451899_2 - - - - 0.00000000000000000000003584 104.0
YYD2_k127_2451899_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000001205 86.0
YYD2_k127_2451899_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000008892 83.0
YYD2_k127_2451899_5 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000003194 55.0
YYD2_k127_2454595_0 Glycosyl transferase family 2 K20534 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 351.0
YYD2_k127_2454595_1 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002116 241.0
YYD2_k127_2454595_2 - - - - 0.00000000000000000000000000000004947 130.0
YYD2_k127_2454595_3 amine dehydrogenase activity - - - 0.00000000000000000000000316 108.0
YYD2_k127_2478872_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000008089 104.0
YYD2_k127_2478872_1 Carboxypeptidase regulatory-like domain - - - 0.00000007294 64.0
YYD2_k127_2480322_0 Transposase DDE domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002798 257.0
YYD2_k127_2480322_1 Belongs to the 'phage' integrase family - - - 0.000000000000000005189 87.0
YYD2_k127_2480322_2 Transposase DDE domain - - - 0.000000000000000006565 88.0
YYD2_k127_2480322_3 cAMP biosynthetic process - - - 0.00003522 46.0
YYD2_k127_2484764_0 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001351 264.0
YYD2_k127_2484764_1 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000001237 229.0
YYD2_k127_2484764_2 peptidyl-tyrosine sulfation - - - 0.00000000000003508 81.0
YYD2_k127_2484764_3 Rieske [2Fe-2S] domain - - - 0.0000000003541 68.0
YYD2_k127_2484831_0 Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 3.17e-212 670.0
YYD2_k127_2484831_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 577.0
YYD2_k127_2484831_10 Belongs to the ABC transporter superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 333.0
YYD2_k127_2484831_11 Belongs to the ABC transporter superfamily K02031,K02032,K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 313.0
YYD2_k127_2484831_12 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 314.0
YYD2_k127_2484831_13 UbiA prenyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000579 290.0
YYD2_k127_2484831_14 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000004386 235.0
YYD2_k127_2484831_15 Probable zinc-ribbon domain - - - 0.000000000000000000000000000000000000000003659 156.0
YYD2_k127_2484831_16 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000000000000000000002195 132.0
YYD2_k127_2484831_17 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000001334 100.0
YYD2_k127_2484831_18 Peptidase M56 - - - 0.0000002111 63.0
YYD2_k127_2484831_19 Carboxypeptidase regulatory-like domain - - - 0.00001389 58.0
YYD2_k127_2484831_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 535.0
YYD2_k127_2484831_20 - - - - 0.0002345 49.0
YYD2_k127_2484831_3 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 518.0
YYD2_k127_2484831_4 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006548 495.0
YYD2_k127_2484831_5 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004935 454.0
YYD2_k127_2484831_6 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 414.0
YYD2_k127_2484831_7 Phosphoglycerate mutase family K01834 - 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008572 383.0
YYD2_k127_2484831_8 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 386.0
YYD2_k127_2484831_9 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 335.0
YYD2_k127_2486148_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007701 382.0
YYD2_k127_2486148_1 NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003199 353.0
YYD2_k127_2486148_2 unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003592 254.0
YYD2_k127_2486148_3 Ferric uptake regulator family K22297 - - 0.0000000000000000000000000000000000000000000000000000035 195.0
YYD2_k127_2492423_0 conserved protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000004073 245.0
YYD2_k127_2492423_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000002565 225.0
YYD2_k127_2492423_2 TraB family K09973 - - 0.0000000000000000000000000000000000000000000000763 183.0
YYD2_k127_2492423_3 Cupin domain - - - 0.0000000000000000000000004708 109.0
YYD2_k127_2492423_4 - - - - 0.0001163 49.0
YYD2_k127_2492544_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 370.0
YYD2_k127_2492544_1 oxidoreductase activity, acting on diphenols and related substances as donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000003792 241.0
YYD2_k127_2492544_2 Transcriptional regulator, Crp Fnr family - - - 0.000000000000000000000000000000005734 134.0
YYD2_k127_2492544_3 Ethanolamine utilisation protein EutQ - - - 0.000000000000000000000000000003874 123.0
YYD2_k127_2492544_4 - - - - 0.0000000000000000801 83.0
YYD2_k127_2501431_0 Protein of unknown function (DUF1722) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000405 333.0
YYD2_k127_2501431_1 Protein of unknown function (DUF520) K09767 - - 0.000000000000000000000000000000000000000000000000001074 187.0
YYD2_k127_2501579_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 597.0
YYD2_k127_2501579_1 PFAM Acetamidase Formamidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005375 332.0
YYD2_k127_2503946_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001342 287.0
YYD2_k127_2503946_1 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000001733 222.0
YYD2_k127_2503946_2 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000005318 154.0
YYD2_k127_2524624_0 copper-translocating P-type ATPase K17686 - 3.6.3.54 3.773e-308 975.0
YYD2_k127_2524624_1 GTP-binding protein TypA K06207 - - 2.033e-270 845.0
YYD2_k127_2524624_10 - - - - 0.0000000003278 67.0
YYD2_k127_2524624_2 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 422.0
YYD2_k127_2524624_3 Hypothetical methyltransferase K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 380.0
YYD2_k127_2524624_4 copper resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009828 277.0
YYD2_k127_2524624_5 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001012 254.0
YYD2_k127_2524624_6 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000006992 151.0
YYD2_k127_2524624_7 Regulatory protein, FmdB family - - - 0.000000000000000000006243 95.0
YYD2_k127_2524624_8 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000001446 104.0
YYD2_k127_2524624_9 iron ion binding - - - 0.0000000000001243 75.0
YYD2_k127_2538198_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 621.0
YYD2_k127_2538198_1 COG0188 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) A subunit K02469 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000001414 226.0
YYD2_k127_2552696_0 PFAM carboxyl transferase K01969,K15052 - 2.1.3.15,6.4.1.3,6.4.1.4 4.04e-247 773.0
YYD2_k127_2552696_1 Protein of unknown function, DUF255 K06888 - - 3.723e-226 722.0
YYD2_k127_2552696_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 335.0
YYD2_k127_2552696_11 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005532 265.0
YYD2_k127_2552696_12 Ferritin-like domain K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000004558 218.0
YYD2_k127_2552696_13 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - - - 0.00000000000000000000000000000000000000005609 164.0
YYD2_k127_2552696_14 - K02172 - - 0.000000000000000000000000000000000006307 149.0
YYD2_k127_2552696_15 Virulence factor BrkB - - - 0.0000000000000000000002225 110.0
YYD2_k127_2552696_16 Acetyl propionyl-CoA carboxylase alpha subunit K01968 - 6.4.1.4 0.00000000000006465 79.0
YYD2_k127_2552696_2 Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate K07516 - 1.1.1.35 1.775e-207 666.0
YYD2_k127_2552696_3 AMP-binding enzyme K12508 - 6.2.1.34 2.585e-195 633.0
YYD2_k127_2552696_4 CoA carboxylase activity K01968 - 6.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007127 512.0
YYD2_k127_2552696_5 Alcohol dehydrogenase, iron containing, 1 K11173 GO:0003674,GO:0003824,GO:0004022,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006103,GO:0006520,GO:0006536,GO:0006538,GO:0006539,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0047988,GO:0051186,GO:0055114,GO:0070013,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.1.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009519 498.0
YYD2_k127_2552696_6 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 439.0
YYD2_k127_2552696_7 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003887 375.0
YYD2_k127_2552696_8 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 381.0
YYD2_k127_2552696_9 Pfam Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 344.0
YYD2_k127_2553937_0 PFAM Radical SAM - - - 1.749e-225 708.0
YYD2_k127_2553937_1 lipolytic protein G-D-S-L family - - - 1.932e-206 651.0
YYD2_k127_2553937_10 PAS fold - - - 0.000000000000000000000000005462 120.0
YYD2_k127_2553937_11 CarboxypepD_reg-like domain - - - 0.00000000000000000000000003351 127.0
YYD2_k127_2553937_12 Acetyltransferase (GNAT) domain - - - 0.0000000000000694 83.0
YYD2_k127_2553937_13 Spore coat polysaccharide biosynthesis protein - - - 0.000001734 59.0
YYD2_k127_2553937_14 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.00001808 52.0
YYD2_k127_2553937_15 glycolate biosynthetic process K07025 - - 0.00002824 51.0
YYD2_k127_2553937_2 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102,K11103 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004369 520.0
YYD2_k127_2553937_3 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 409.0
YYD2_k127_2553937_4 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 391.0
YYD2_k127_2553937_5 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 294.0
YYD2_k127_2553937_6 N-acylneuraminate-9-phosphate synthase activity K01654,K18430 GO:0003674,GO:0003824,GO:0005975,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016740,GO:0016765,GO:0044238,GO:0071704,GO:1901576 2.5.1.101,2.5.1.56 0.000000000000000000000000000000000000000000000000000000000005782 221.0
YYD2_k127_2553937_7 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.0000000000000000000000000000000000000000000000000000000001502 216.0
YYD2_k127_2553937_8 PFAM TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000000001747 151.0
YYD2_k127_2553937_9 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000001055 135.0
YYD2_k127_2559789_0 COG3227 Zinc metalloprotease (elastase) K01400 GO:0005575,GO:0005576 3.4.24.28 0.00000000000000000000000000000000000000000000000000000000000000001687 250.0
YYD2_k127_2559789_1 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000002735 181.0
YYD2_k127_2559789_2 Uncharacterised protein family (UPF0093) K08973 - - 0.00002471 55.0
YYD2_k127_2569779_0 4Fe-4S dicluster domain K00184 - - 4.937e-297 931.0
YYD2_k127_2569779_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 5.835e-252 787.0
YYD2_k127_2569779_10 signal sequence binding K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001205 265.0
YYD2_k127_2569779_11 PFAM cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000002913 256.0
YYD2_k127_2569779_12 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000001577 238.0
YYD2_k127_2569779_13 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000000000000000000000000000000000005479 221.0
YYD2_k127_2569779_14 spectrin binding K07521,K15502,K19947 - 1.14.13.225 0.0000000000000000000000000000000003257 151.0
YYD2_k127_2569779_15 TIGRFAM Caa(3)-type oxidase, subunit IV K02277 - 1.9.3.1 0.00000000000000003192 87.0
YYD2_k127_2569779_16 - - - - 0.000000000083 73.0
YYD2_k127_2569779_17 PFAM Alcohol dehydrogenase - - - 0.00000001377 61.0
YYD2_k127_2569779_2 Polysulphide reductase, NrfD K00185 - - 1.552e-211 666.0
YYD2_k127_2569779_3 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 558.0
YYD2_k127_2569779_4 DNA topological change K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 436.0
YYD2_k127_2569779_5 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007716 420.0
YYD2_k127_2569779_6 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005061 428.0
YYD2_k127_2569779_7 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 394.0
YYD2_k127_2569779_8 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004526 372.0
YYD2_k127_2569779_9 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 340.0
YYD2_k127_2576281_0 COG0463 Glycosyltransferases involved in cell wall biogenesis K20444 - - 0.0 1121.0
YYD2_k127_2576281_1 Glycosyl transferase, family 2 K00712 - 2.4.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 371.0
YYD2_k127_2576281_2 methyltransferase - - - 0.0000000063 71.0
YYD2_k127_2581041_0 Mo-molybdopterin cofactor metabolic process K03148,K03636,K21029,K21147 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006732,GO:0006777,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0016782,GO:0018130,GO:0019344,GO:0019538,GO:0019637,GO:0019720,GO:0019752,GO:0020012,GO:0030312,GO:0030682,GO:0042783,GO:0043170,GO:0043207,GO:0043436,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0061605,GO:0070566,GO:0071704,GO:0071944,GO:0075136,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.73,2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 606.0
YYD2_k127_2581041_1 Belongs to the cysteine synthase cystathionine beta- synthase family K12339,K21148 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0032991,GO:0033847,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.113,2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003472 365.0
YYD2_k127_2581041_2 SEFIR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 296.0
YYD2_k127_2581041_3 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000003523 232.0
YYD2_k127_2581041_4 Phage derived protein Gp49-like (DUF891) - - - 0.0000000000000000000000000000000000000000005865 160.0
YYD2_k127_2581041_5 JAB/MPN domain K21140 - 3.13.1.6 0.0000000000000000000000000000000235 132.0
YYD2_k127_2581041_6 Helix-turn-helix domain - - - 0.00000000000000000000000000006955 119.0
YYD2_k127_2581041_7 Recombinase K06400 - - 0.000000001117 68.0
YYD2_k127_2582662_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009145 351.0
YYD2_k127_2582662_1 Putative collagen-binding domain of a collagenase - - - 0.00000000000000000000000000000000000000003833 156.0
YYD2_k127_258333_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007555 291.0
YYD2_k127_258333_1 - - - - 0.000000000000000000000000000000000000000000000000000003115 199.0
YYD2_k127_258333_2 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000000000000004413 163.0
YYD2_k127_2592634_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 9.253e-224 723.0
YYD2_k127_2592634_1 Transposase proposed to express due to -1 translational frameshift at the sequence 5'-AAAAAC-3' - - - 0.0000000000000000000000000000000000000000000000000000000000000000002583 236.0
YYD2_k127_2592634_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000003444 252.0
YYD2_k127_2592634_3 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000001016 213.0
YYD2_k127_2592634_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000001369 141.0
YYD2_k127_2592634_5 Metallo-beta-lactamase superfamily - - - 0.000000006023 57.0
YYD2_k127_2606124_0 DNA topological change K03168 - 5.99.1.2 2.54e-305 957.0
YYD2_k127_2606124_1 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 604.0
YYD2_k127_2606124_2 response to abiotic stimulus K06867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007994 470.0
YYD2_k127_2606124_3 Xylose isomerase-like TIM barrel K01816 - 5.3.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000002941 251.0
YYD2_k127_2611680_0 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000001333 222.0
YYD2_k127_2611680_1 - - - - 0.00000000000000000000000000000000201 142.0
YYD2_k127_2611680_2 - - - - 0.000000000000000000000004822 108.0
YYD2_k127_2611680_3 Major Facilitator Superfamily K02575 - - 0.0000000000000000004063 91.0
YYD2_k127_261272_0 cell shape determining protein MreB K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 487.0
YYD2_k127_261272_1 Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009342 391.0
YYD2_k127_261272_2 Integral membrane protein TerC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005753 334.0
YYD2_k127_261272_3 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008042 264.0
YYD2_k127_261272_4 Ferredoxin K04755 - - 0.0000000000000000000000000000000000000000000000000002497 186.0
YYD2_k127_261272_5 iron ion binding - - - 0.00000000000000000000000000000000000000000008788 165.0
YYD2_k127_261272_6 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.00000000000000000000000000000000000014 150.0
YYD2_k127_261272_7 - - - - 0.0004458 49.0
YYD2_k127_2620716_0 polysaccharide catabolic process K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 309.0
YYD2_k127_2620716_1 PAS fold - - - 0.000000000000000000000000000007313 123.0
YYD2_k127_2635010_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000004999 215.0
YYD2_k127_2635010_1 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000000000003344 204.0
YYD2_k127_2655229_0 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004134 467.0
YYD2_k127_2655229_1 Protein of unknown function (DUF3302) - - - 0.000000000000000000000000000000000009163 142.0
YYD2_k127_2655229_2 hydrolase - - - 0.00000000000000000000000003023 116.0
YYD2_k127_2655229_3 Biotin-lipoyl like - - - 0.0000000000001692 72.0
YYD2_k127_2655229_4 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.000000001145 64.0
YYD2_k127_2663121_0 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 1.197e-207 662.0
YYD2_k127_2663121_1 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 369.0
YYD2_k127_2663121_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001338 264.0
YYD2_k127_2663121_3 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K14161 - - 0.0000000000000000000000000000000000000000000000000000000001197 223.0
YYD2_k127_2663121_4 recA bacterial DNA recombination protein - - - 0.00000000000000000000000005353 119.0
YYD2_k127_2667476_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K22015 - 1.17.1.9,1.17.99.7 0.0 1409.0
YYD2_k127_2667476_1 PFAM Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit K00122 - 1.17.1.9 1.251e-263 829.0
YYD2_k127_2667476_2 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 9.15e-241 761.0
YYD2_k127_2667476_3 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 436.0
YYD2_k127_2667476_4 Ferritin-like domain K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000000001179 216.0
YYD2_k127_2667476_5 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000001045 188.0
YYD2_k127_2667476_6 BON domain - - - 0.0000000000000000001077 93.0
YYD2_k127_2667476_7 Cupin 2, conserved barrel domain protein - - - 0.000000000000002996 82.0
YYD2_k127_267338_0 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 430.0
YYD2_k127_267338_1 ABC transporter K09697 - 3.6.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 355.0
YYD2_k127_267338_2 sodium ABC transporter, permease K09696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003881 339.0
YYD2_k127_267338_3 DNA-templated transcription, initiation - - - 0.000000000000000000000000000000000000000000000000000000000000001633 226.0
YYD2_k127_267338_4 AAA domain K02450 - - 0.000000000000000000000000000000000000000000000000005544 201.0
YYD2_k127_267338_5 Transcriptional regulator K22293 - - 0.00000000000000000000000000000000000006843 151.0
YYD2_k127_267338_6 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000004067 131.0
YYD2_k127_2682082_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.723e-283 885.0
YYD2_k127_2682082_1 Belongs to the argininosuccinate synthase family. Type 2 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 1.316e-243 758.0
YYD2_k127_2682082_2 PFAM phosphoesterase, RecJ domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001125 286.0
YYD2_k127_2682082_3 MgsA AAA+ ATPase C terminal K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001945 256.0
YYD2_k127_2682082_4 Acetyltransferase (GNAT) family K03823 - 2.3.1.183 0.00000000000000000000000000000000000000000000000000000000000000002069 227.0
YYD2_k127_2682082_5 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000004474 166.0
YYD2_k127_2682082_6 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.000000000000000000000000000003496 130.0
YYD2_k127_2682082_7 von Willebrand factor, type A - - - 0.0000000000000000000000000002536 133.0
YYD2_k127_2682082_8 Belongs to the MlaE permease family K02066 - - 0.00000000000000009176 82.0
YYD2_k127_2682082_9 Tetratricopeptide repeats - - - 0.00000000000002412 86.0
YYD2_k127_2691494_0 IMG reference gene - - - 0.000000000000000000000000003834 120.0
YYD2_k127_2691494_1 von Willebrand factor, type A - - - 0.000009475 49.0
YYD2_k127_2691494_2 COG0810 Periplasmic protein TonB, links inner and outer membranes K03832 - - 0.00005353 55.0
YYD2_k127_2693321_0 Tannase and feruloyl esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 453.0
YYD2_k127_2693321_1 HAD-hyrolase-like K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000005332 224.0
YYD2_k127_2693321_10 Acyl-transferase K00655 - 2.3.1.51 0.0000000000000000000009082 108.0
YYD2_k127_2693321_11 protein homooligomerization - - - 0.000000000000006908 85.0
YYD2_k127_2693321_12 - - - - 0.0000000000006799 79.0
YYD2_k127_2693321_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000005642 195.0
YYD2_k127_2693321_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000003184 197.0
YYD2_k127_2693321_4 Domain of unknown function (DUF4265) - - - 0.00000000000000000000000000000000000000000000004653 171.0
YYD2_k127_2693321_5 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768,K12132 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016021,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0031224,GO:0031226,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.11.1,5.2.1.8 0.00000000000000000000000000000000000000000000005592 177.0
YYD2_k127_2693321_6 oxidation-reduction process K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000000008272 178.0
YYD2_k127_2693321_7 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000000000003684 172.0
YYD2_k127_2693321_8 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000008232 143.0
YYD2_k127_2693321_9 Domain of unknown function (DUF1905) - - - 0.000000000000000000000000001357 117.0
YYD2_k127_2702462_0 FCD - - - 0.000000000000000000000000000000000000000000000000000000000005109 219.0
YYD2_k127_2702462_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000005808 115.0
YYD2_k127_270793_0 DNA topological change K03168 - 5.99.1.2 1.088e-216 699.0
YYD2_k127_270793_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006679 593.0
YYD2_k127_270793_2 O-methyltransferase K00588 - 2.1.1.104 0.0000000000000000000000000000000000000000000000000000000000000000001227 236.0
YYD2_k127_270793_4 Carboxypeptidase regulatory-like domain - - - 0.000006875 59.0
YYD2_k127_2708524_0 amidase activity K01426 - 3.5.1.4 5.519e-242 778.0
YYD2_k127_2708524_1 Carboxylesterase family K03929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 414.0
YYD2_k127_2708524_2 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 389.0
YYD2_k127_2708524_3 Mo-co oxidoreductase dimerisation domain K17225 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009379 346.0
YYD2_k127_2708524_4 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000001095 226.0
YYD2_k127_2708524_5 cytochrome K08738 - - 0.000000000000000000000000000000000000006161 153.0
YYD2_k127_2708524_6 - - - - 0.000000000000000007089 99.0
YYD2_k127_2712107_0 56kDa selenium binding protein (SBP56) K17285 - - 1.408e-227 712.0
YYD2_k127_2712107_1 Dehydrogenase K00114 - 1.1.2.8 4.995e-196 627.0
YYD2_k127_2712107_10 MerR, DNA binding K13639 - - 0.000000000000000000000000000000000000000000000000000000000001459 214.0
YYD2_k127_2712107_11 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000004099 214.0
YYD2_k127_2712107_12 Serine aminopeptidase, S33 K01055 - 3.1.1.24 0.00000000000000000000000000000000000006508 153.0
YYD2_k127_2712107_13 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.00000000000000000000000000001143 120.0
YYD2_k127_2712107_15 Protein kinase domain K12132 - 2.7.11.1 0.00000000000001245 81.0
YYD2_k127_2712107_16 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.00000000273 65.0
YYD2_k127_2712107_2 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000569 438.0
YYD2_k127_2712107_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000909 432.0
YYD2_k127_2712107_4 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 414.0
YYD2_k127_2712107_5 Malonyl-CoA decarboxylase N-terminal domain K01578 - 4.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008175 401.0
YYD2_k127_2712107_6 Tannase and feruloyl esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 387.0
YYD2_k127_2712107_7 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002994 273.0
YYD2_k127_2712107_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000001083 224.0
YYD2_k127_2712107_9 Short-chain Dehydrogenase reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000724 224.0
YYD2_k127_2723206_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 3.785e-240 752.0
YYD2_k127_2723206_1 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009477 436.0
YYD2_k127_2723206_10 PFAM aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K00256,K07303 - 1.3.99.16 0.00000000000000000000000000000000000001436 147.0
YYD2_k127_2723206_11 - - - - 0.00000000000000000000000000001136 128.0
YYD2_k127_2723206_12 metal-dependent phosphoesterases (PHP family) - - - 0.000000000000000002841 95.0
YYD2_k127_2723206_2 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 409.0
YYD2_k127_2723206_3 electron transfer activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 407.0
YYD2_k127_2723206_4 eRF1 domain 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 327.0
YYD2_k127_2723206_5 Natural resistance-associated macrophage protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004388 280.0
YYD2_k127_2723206_6 - - - - 0.00000000000000000000000000000000000000000000000000000000001576 213.0
YYD2_k127_2723206_7 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000002501 194.0
YYD2_k127_2723206_9 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.0000000000000000000000000000000000000000000008596 172.0
YYD2_k127_272722_0 COG0058 Glucan phosphorylase K00688 - 2.4.1.1 2.96e-294 929.0
YYD2_k127_272722_1 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 6.113e-285 893.0
YYD2_k127_272722_10 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000000000166 165.0
YYD2_k127_272722_11 Phosphoribosyl transferase domain K00762 - 2.4.2.10 0.0000000000000000000000000000000000000006372 158.0
YYD2_k127_272722_12 Tellurite resistance protein TerB - - - 0.0000000000000000000000000000000000001709 151.0
YYD2_k127_272722_13 SnoaL-like domain - - - 0.0000000000000000000000000000000000003711 143.0
YYD2_k127_272722_14 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000003712 156.0
YYD2_k127_272722_15 DinB superfamily K07552 - - 0.0000000000000000000000000000000000006445 148.0
YYD2_k127_272722_16 domain protein K14194 - - 0.0000000000000000000000000004916 132.0
YYD2_k127_272722_17 response regulator K07689 - - 0.00000000000000000000003807 105.0
YYD2_k127_272722_18 Metallo-beta-lactamase superfamily - - - 0.000000000000000000001016 98.0
YYD2_k127_272722_19 PFAM von Willebrand factor type A K07114,K12511 - - 0.000000000000000002085 97.0
YYD2_k127_272722_2 Two component regulator propeller K07315,K12132,K13924 - 2.1.1.80,2.7.11.1,3.1.1.61,3.1.3.3 3.823e-222 727.0
YYD2_k127_272722_20 DinB superfamily - - - 0.0000000000000002433 85.0
YYD2_k127_272722_21 Sterol carrier protein - - - 0.0000000000000008637 82.0
YYD2_k127_272722_22 Belongs to the sigma-70 factor family. ECF subfamily K03088 GO:0001101,GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009410,GO:0009415,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042221,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1901700,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.00000000001952 73.0
YYD2_k127_272722_23 COG2335, Secreted and surface protein containing fasciclin-like repeats - - - 0.000000007619 67.0
YYD2_k127_272722_24 Carboxypeptidase regulatory-like domain - - - 0.0005438 51.0
YYD2_k127_272722_3 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 619.0
YYD2_k127_272722_4 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 508.0
YYD2_k127_272722_5 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 347.0
YYD2_k127_272722_6 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005983 333.0
YYD2_k127_272722_7 abc transporter atp-binding protein K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000315 263.0
YYD2_k127_272722_8 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000001545 185.0
YYD2_k127_272722_9 RNA signal recognition particle 4.5S RNA - - - 0.000000000000000000000000000000000000000000002162 166.0
YYD2_k127_2727483_0 glyoxalase III activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000391 256.0
YYD2_k127_2727483_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001543 233.0
YYD2_k127_2727483_2 PFAM helix-turn-helix- domain containing protein, AraC type - - - 0.000000000000000000000000000000000000000000000000000000000000000781 230.0
YYD2_k127_2727483_3 - - - - 0.000000000000000000000000000000000000000000000000002432 192.0
YYD2_k127_2727483_4 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000005346 166.0
YYD2_k127_2727483_5 - - - - 0.0000000000000000000000001234 110.0
YYD2_k127_2727483_6 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000001971 97.0
YYD2_k127_2738373_0 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 451.0
YYD2_k127_2738373_1 Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 386.0
YYD2_k127_2738373_2 - K02172 - - 0.000000000000000000000000000000000000000000000000000000004154 212.0
YYD2_k127_2738373_3 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000001014 203.0
YYD2_k127_2738373_4 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000000000000000000000007698 182.0
YYD2_k127_2738373_5 - K02172 - - 0.0000000000000000000000000000000000000000000000001317 188.0
YYD2_k127_2738373_6 - - - - 0.000000000000000000000009062 110.0
YYD2_k127_2738373_7 cellular response to DNA damage stimulus K07340 - - 0.000000000005895 72.0
YYD2_k127_274097_0 Dehydrogenase K00117 - 1.1.5.2 5.395e-283 895.0
YYD2_k127_274097_1 - K06862 - - 0.000000000000000000000000000000000000000000000002574 183.0
YYD2_k127_274097_2 NUDIX domain - - - 0.00000000000000000000000000000000000746 142.0
YYD2_k127_274097_3 Haem-degrading - - - 0.000000000000000000000000000000001134 135.0
YYD2_k127_274097_4 Putative restriction endonuclease - - - 0.0000000000000000000003872 97.0
YYD2_k127_2741564_0 PFAM Peptidase M1, membrane alanine aminopeptidase K01256,K08776 - 3.4.11.2 2.548e-228 734.0
YYD2_k127_2741564_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 610.0
YYD2_k127_2741564_10 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001847 273.0
YYD2_k127_2741564_11 lipolytic protein G-D-S-L family K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.0000000000000000000000000000000000000000000000000006037 194.0
YYD2_k127_2741564_12 Serine/threonine phosphatases, family 2C, catalytic domain K01090 - 3.1.3.16 0.00000000000000000000000000000000000000004115 160.0
YYD2_k127_2741564_13 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.0000000000000000000000000000000000001752 149.0
YYD2_k127_2741564_14 hydrolase activity, acting on ester bonds - - - 0.000000000000000000000000000000001012 143.0
YYD2_k127_2741564_15 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000001008 141.0
YYD2_k127_2741564_16 PFAM aldo keto reductase - - - 0.00000000000000000000000000003716 129.0
YYD2_k127_2741564_17 hyperosmotic response - - - 0.00000000000000000000153 103.0
YYD2_k127_2741564_18 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.00000000000000005165 84.0
YYD2_k127_2741564_19 Methyltransferase FkbM domain - - - 0.000000000000262 79.0
YYD2_k127_2741564_2 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004267 445.0
YYD2_k127_2741564_3 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009099 452.0
YYD2_k127_2741564_4 (GMC) oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 411.0
YYD2_k127_2741564_5 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 401.0
YYD2_k127_2741564_6 cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 383.0
YYD2_k127_2741564_7 MreB/Mbl protein K03569 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0005886,GO:0007049,GO:0008150,GO:0008360,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0032505,GO:0042802,GO:0043093,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051301,GO:0051302,GO:0051782,GO:0051983,GO:0065007,GO:0065008,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 383.0
YYD2_k127_2741564_8 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 354.0
YYD2_k127_2741564_9 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 294.0
YYD2_k127_2745002_0 Predicted Permease Membrane Region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008305 386.0
YYD2_k127_2745002_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000007209 220.0
YYD2_k127_2750439_0 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000887 470.0
YYD2_k127_2750439_1 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 406.0
YYD2_k127_2750439_2 PFAM Glucose Sorbosone dehydrogenase K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 301.0
YYD2_k127_2750439_3 PFAM regulatory protein LuxR - - - 0.00000000000000000000000000000000000000000000000000000007484 204.0
YYD2_k127_2750439_4 spore germination K07790 - - 0.000000000000000000000000000000000000000000967 169.0
YYD2_k127_2750439_5 MASE1 - - - 0.0000000000000000000000000000000000000003506 167.0
YYD2_k127_2750439_6 ParB-like nuclease domain K03497 - - 0.000000009967 67.0
YYD2_k127_2750439_7 - - - - 0.00000008707 60.0
YYD2_k127_2763212_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 2.964e-244 783.0
YYD2_k127_2763212_1 radical SAM domain protein - - - 3.202e-207 657.0
YYD2_k127_2763212_10 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007772 291.0
YYD2_k127_2763212_11 NADPH-dependent FMN reductase K19784 - - 0.000000000000000000000000000000000000000000000008158 180.0
YYD2_k127_2763212_12 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000001372 147.0
YYD2_k127_2763212_13 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000003242 144.0
YYD2_k127_2763212_14 Cupin 2, conserved barrel domain protein K11477 - - 0.0000000000000000000001826 103.0
YYD2_k127_2763212_16 - - - - 0.0000000005384 63.0
YYD2_k127_2763212_17 RecX family K03565 - - 0.0000009965 56.0
YYD2_k127_2763212_18 - - - - 0.00001288 48.0
YYD2_k127_2763212_19 CAAX protease self-immunity - - - 0.00002609 49.0
YYD2_k127_2763212_2 IgA Peptidase M64 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 559.0
YYD2_k127_2763212_3 Nucleoside H+ symporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007568 506.0
YYD2_k127_2763212_4 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 485.0
YYD2_k127_2763212_5 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009194 490.0
YYD2_k127_2763212_6 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 407.0
YYD2_k127_2763212_7 Homoserine dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006927 389.0
YYD2_k127_2763212_8 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 353.0
YYD2_k127_2763212_9 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004184 327.0
YYD2_k127_2764874_0 amine dehydrogenase activity K17285 - - 2.173e-239 746.0
YYD2_k127_2764874_1 Outer membrane protein beta-barrel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 481.0
YYD2_k127_2764874_10 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.000000009466 68.0
YYD2_k127_2764874_2 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006467 265.0
YYD2_k127_2764874_3 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000792 246.0
YYD2_k127_2764874_4 glycerophosphodiester phosphodiesterase activity K01126 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008081,GO:0008889,GO:0009279,GO:0016020,GO:0016787,GO:0016788,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044462,GO:0044464,GO:0046872,GO:0071944 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000003601 251.0
YYD2_k127_2764874_5 - - - - 0.00000000000000000000000000000000000000000000000000000000001358 213.0
YYD2_k127_2764874_6 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000002483 199.0
YYD2_k127_2764874_7 Belongs to the acetyltransferase family. ArgA subfamily K00619 - 2.3.1.1 0.0000000000000000000000000005258 118.0
YYD2_k127_2764874_8 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000001061 124.0
YYD2_k127_2764874_9 Cold shock protein domain - - - 0.00000000000000000003645 91.0
YYD2_k127_2770520_0 transmembrane transporter activity K08196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004981 497.0
YYD2_k127_2770520_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002244 285.0
YYD2_k127_2770520_2 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000004279 211.0
YYD2_k127_2770520_3 - - - - 0.00000000000000000000000000000000000000000000000000004074 201.0
YYD2_k127_2770520_4 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000005274 177.0
YYD2_k127_2770520_5 - - - - 0.00000000000000000000694 106.0
YYD2_k127_2772136_0 protein conserved in bacteria - - - 2.741e-233 739.0
YYD2_k127_2772136_1 6-phosphogluconolactonase K01057 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009051,GO:0009117,GO:0009987,GO:0016787,GO:0016788,GO:0017057,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0052689,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 3.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000001204 236.0
YYD2_k127_2772136_2 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000001891 224.0
YYD2_k127_2772136_3 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000003031 144.0
YYD2_k127_2775523_0 peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 428.0
YYD2_k127_2775523_1 FMN binding K00104,K16422 - 1.1.3.15,1.1.3.46 0.000000000000000000000000000000000000000000000000000000001934 207.0
YYD2_k127_2775523_2 - - - - 0.0000000000000000000000000000000000000000000000004407 189.0
YYD2_k127_2775523_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000003987 159.0
YYD2_k127_2775523_4 - - - - 0.000000000000000000000000000000000000000006369 158.0
YYD2_k127_2775523_5 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000006098 124.0
YYD2_k127_2775523_6 Histidine kinase - - - 0.0000000000000000000000000001944 122.0
YYD2_k127_2775523_7 Lipocalin-like domain - - - 0.0005151 52.0
YYD2_k127_2779136_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 2.279e-198 628.0
YYD2_k127_2779136_1 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000002416 153.0
YYD2_k127_2779136_2 - K02172 - - 0.00000000000000000000000000000000001774 148.0
YYD2_k127_2779136_3 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000002574 128.0
YYD2_k127_2779136_4 GYD domain - - - 0.00000000000000000000005643 100.0
YYD2_k127_2779136_5 NADP transhydrogenase K00322,K00324 - 1.6.1.1,1.6.1.2 0.0000000005694 61.0
YYD2_k127_2779617_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009378 369.0
YYD2_k127_2779617_1 RNA pseudouridylate synthase K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008158 327.0
YYD2_k127_2779617_2 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 301.0
YYD2_k127_2779617_3 amino acid - - - 0.000000000000000000000000000000000000000000003385 172.0
YYD2_k127_2779617_4 NHL repeat - - - 0.00000000000000000000000000000000000000000001422 173.0
YYD2_k127_2809199_0 NADH-quinone oxidoreductase chain L K00341,K05577 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007003 474.0
YYD2_k127_2809199_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 303.0
YYD2_k127_2809199_2 4Fe-4S dicluster domain K00338,K02573,K03941 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000587 144.0
YYD2_k127_2809199_3 NAD binding K00333,K05579,K13378 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000002641 133.0
YYD2_k127_2809199_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 - 1.6.5.3 0.0000000000000000000000000000003932 126.0
YYD2_k127_2809199_5 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339,K05578 - 1.6.5.3 0.00000000000000000000004487 108.0
YYD2_k127_2811771_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.969e-283 906.0
YYD2_k127_2811771_1 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008961 452.0
YYD2_k127_2811771_10 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000001247 149.0
YYD2_k127_2811771_11 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K02405 - - 0.0000000000000000000000000000000000002398 154.0
YYD2_k127_2811771_12 Transcription termination factor nusG - - - 0.00000000000000000000000000000000002075 143.0
YYD2_k127_2811771_13 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000000002683 87.0
YYD2_k127_2811771_14 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.00000000000005025 83.0
YYD2_k127_2811771_15 PFAM response regulator receiver K02481,K07712 - - 0.0000000000006365 74.0
YYD2_k127_2811771_17 Tfp pilus assembly protein pilus retraction ATPase PilT K02669 - - 0.000000000851 72.0
YYD2_k127_2811771_18 PFAM Stress responsive A B Barrel Domain - - - 0.00002156 51.0
YYD2_k127_2811771_19 Glutamine synthetase, beta-Grasp domain K01915 - 6.3.1.2 0.000139 52.0
YYD2_k127_2811771_2 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008271 402.0
YYD2_k127_2811771_20 recombinase activity - - - 0.0002926 46.0
YYD2_k127_2811771_3 histidine kinase A domain protein K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004183 307.0
YYD2_k127_2811771_4 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002366 262.0
YYD2_k127_2811771_5 Bacterial regulatory protein, Fis family K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002639 263.0
YYD2_k127_2811771_6 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000003479 250.0
YYD2_k127_2811771_7 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000003764 246.0
YYD2_k127_2811771_8 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000002308 205.0
YYD2_k127_2811771_9 diguanylate cyclase - - - 0.00000000000000000000000000000000000000001642 169.0
YYD2_k127_2815873_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1614.0
YYD2_k127_2815873_1 xanthine dehydrogenase activity - - - 9.318e-304 945.0
YYD2_k127_2815873_10 - - - - 0.0000000000000000000000000000003391 133.0
YYD2_k127_2815873_11 - - - - 0.0000000000000000000000000001229 125.0
YYD2_k127_2815873_12 Transcription factor zinc-finger - - - 0.000000000000000000002599 100.0
YYD2_k127_2815873_13 GCN5-related N-acetyl-transferase K06975 - - 0.00000000000003296 79.0
YYD2_k127_2815873_16 - - - - 0.0000002914 59.0
YYD2_k127_2815873_17 Endonuclease/Exonuclease/phosphatase family - - - 0.00000437 58.0
YYD2_k127_2815873_2 nucleotidyltransferase activity K01154,K07076 - 3.1.21.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 397.0
YYD2_k127_2815873_3 peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 377.0
YYD2_k127_2815873_4 xanthine dehydrogenase activity K13479 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 328.0
YYD2_k127_2815873_5 HEAT repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000818 295.0
YYD2_k127_2815873_6 2 iron, 2 sulfur cluster binding K03518,K07302,K13483 - 1.2.5.3,1.3.99.16 0.0000000000000000000000000000000000000000000000000000005539 199.0
YYD2_k127_2815873_7 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000002747 170.0
YYD2_k127_2815873_8 PBS lyase HEAT-like repeat - - - 0.000000000000000000000000000000000005935 148.0
YYD2_k127_2815873_9 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.000000000000000000000000000000006903 134.0
YYD2_k127_2817854_0 ABC transporter ATPase permease K06147 - - 1.183e-266 832.0
YYD2_k127_2817854_1 COG1132 ABC-type multidrug transport system, ATPase and permease components K06147 - - 1.032e-265 829.0
YYD2_k127_2817854_10 efflux transmembrane transporter activity - - - 0.00000000001037 68.0
YYD2_k127_2817854_2 WD40 domain protein beta Propeller K12132 - 2.7.11.1 2.698e-214 697.0
YYD2_k127_2817854_3 DNA topological change K03168 - 5.99.1.2 1.769e-213 694.0
YYD2_k127_2817854_4 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 608.0
YYD2_k127_2817854_5 Peptidase dimerisation domain K01439,K13049 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003879 483.0
YYD2_k127_2817854_6 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 468.0
YYD2_k127_2817854_7 ankyrin repeat K15503 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 429.0
YYD2_k127_2817854_8 Twin-arginine translocation pathway signal sequence - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 420.0
YYD2_k127_2817854_9 Cytochrome c - - - 0.000000000000000000000000001496 119.0
YYD2_k127_2821179_0 PFAM 4-hydroxyphenylacetate 3-hydroxylase K00483 - 1.14.14.9 3.647e-254 796.0
YYD2_k127_2821179_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 484.0
YYD2_k127_2821179_2 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000001835 209.0
YYD2_k127_2821179_3 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000003729 188.0
YYD2_k127_2828994_0 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 4.114e-246 775.0
YYD2_k127_2828994_1 WD40-like Beta Propeller Repeat - - - 1.068e-221 724.0
YYD2_k127_2828994_10 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008828 297.0
YYD2_k127_2828994_11 Laminin G domain - - - 0.000000000000000000000000000000000000003723 166.0
YYD2_k127_2828994_12 Subtilase family - - - 0.0000000000000000000000000000000000001852 153.0
YYD2_k127_2828994_13 - - - - 0.000000000000000000000000000000001341 136.0
YYD2_k127_2828994_14 DinB superfamily - - - 0.000000000000000000000000008468 117.0
YYD2_k127_2828994_15 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.000000000000000000002262 108.0
YYD2_k127_2828994_16 Protein of unknown function (DUF3738) - - - 0.000000000000004712 79.0
YYD2_k127_2828994_17 Involved in the TonB-independent uptake of proteins K03641 - - 0.0000000000002184 83.0
YYD2_k127_2828994_18 succinyl-diaminopimelate desuccinylase activity K01438 - 3.5.1.16 0.0000000000004933 70.0
YYD2_k127_2828994_19 Domain of unknown function (DUF4149) - - - 0.00000000007052 70.0
YYD2_k127_2828994_2 Gamma-glutamyltranspeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 554.0
YYD2_k127_2828994_20 - - - - 0.000000009478 66.0
YYD2_k127_2828994_21 SnoaL-like polyketide cyclase - - - 0.0000002958 60.0
YYD2_k127_2828994_22 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.000000623 55.0
YYD2_k127_2828994_3 PFAM Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 484.0
YYD2_k127_2828994_4 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007844 465.0
YYD2_k127_2828994_5 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 432.0
YYD2_k127_2828994_6 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 343.0
YYD2_k127_2828994_7 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 315.0
YYD2_k127_2828994_8 Dihydrodipicolinate reductase, N-terminus K21672 - 1.4.1.12,1.4.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004712 292.0
YYD2_k127_2828994_9 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001023 287.0
YYD2_k127_2847385_0 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004985 451.0
YYD2_k127_2847385_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004873 407.0
YYD2_k127_2847385_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 343.0
YYD2_k127_285110_0 peptidoglycan glycosyltransferase activity K03588,K05364,K05837 GO:0002682,GO:0002684,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009605,GO:0009607,GO:0009987,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051301,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0075136 - 5.505e-245 795.0
YYD2_k127_285110_1 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005319 368.0
YYD2_k127_285110_10 Alpha beta hydrolase - - - 0.000000000000000002481 93.0
YYD2_k127_285110_11 Transposase K07486 - - 0.00000000000000009552 84.0
YYD2_k127_285110_12 Cupin domain - - - 0.0001553 53.0
YYD2_k127_285110_2 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003577 370.0
YYD2_k127_285110_3 - - - - 0.000000000000000000000000000000000000000000000000000000001213 208.0
YYD2_k127_285110_4 histone H2A K63-linked ubiquitination K01768,K03220,K10914 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000001901 211.0
YYD2_k127_285110_5 Alcohol dehydrogenase GroES-like domain K00121 - 1.1.1.1,1.1.1.284 0.0000000000000000000000000000000000005251 153.0
YYD2_k127_285110_6 - - - - 0.000000000000000000000000000000001951 143.0
YYD2_k127_285110_7 histone H2A K63-linked ubiquitination K02283 - - 0.000000000000000000000000000000004458 143.0
YYD2_k127_285110_8 - - - - 0.00000000000000000000000000461 114.0
YYD2_k127_285110_9 InterPro IPR007367 - - - 0.0000000000000000000007656 100.0
YYD2_k127_285458_0 Peptidase, M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 439.0
YYD2_k127_285458_1 Belongs to the pyruvate kinase family K00873 GO:0001871,GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006116,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0030246,GO:0030247,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:2001065 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009606 363.0
YYD2_k127_285458_10 COG3857 ATP-dependent nuclease, subunit B K16899 - 3.6.4.12 0.0000000000000000000000000000000006223 152.0
YYD2_k127_285458_11 recombinase activity - - - 0.00000000000000000000000000713 119.0
YYD2_k127_285458_12 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00007181 52.0
YYD2_k127_285458_13 - - - - 0.0001317 49.0
YYD2_k127_285458_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 338.0
YYD2_k127_285458_3 thiolester hydrolase activity K01179,K06889,K10773,K15853 - 3.2.1.4,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 338.0
YYD2_k127_285458_4 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 331.0
YYD2_k127_285458_5 PFAM Amidase K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 331.0
YYD2_k127_285458_6 PFAM Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009737 317.0
YYD2_k127_285458_7 Belongs to the peptidase S51 family K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001484 281.0
YYD2_k127_285458_8 UvrD REP helicase K03657,K16898 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000001415 278.0
YYD2_k127_285458_9 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000003485 144.0
YYD2_k127_2866424_0 domain protein - - - 8.091e-301 955.0
YYD2_k127_2866424_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001548 263.0
YYD2_k127_2866424_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000000000001301 203.0
YYD2_k127_2866424_3 TIGRFAM reductive dehalogenase - - - 0.0000000000000000000000000000008679 136.0
YYD2_k127_2866424_4 transcriptional regulator PadR family - - - 0.00001569 47.0
YYD2_k127_2871332_0 Heavy metal translocating P-type atpase K01534 - 3.6.3.3,3.6.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 573.0
YYD2_k127_2871332_1 Catalyzes the conversion of dihydroorotate to orotate K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005783 349.0
YYD2_k127_2871332_10 PFAM Bacterial regulatory protein, arsR family K21903 - - 0.0000000000000000000000000002467 116.0
YYD2_k127_2871332_11 Domain of unknown function (DUF4340) - - - 0.000000000000000002 98.0
YYD2_k127_2871332_12 Protein of unknown function (DUF2723) - - - 0.00000000000001115 88.0
YYD2_k127_2871332_13 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.0000000009955 68.0
YYD2_k127_2871332_14 Heat shock 70 kDa protein K04043 - - 0.000005335 57.0
YYD2_k127_2871332_15 - K05826 - - 0.00005907 49.0
YYD2_k127_2871332_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09697 - 3.6.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 334.0
YYD2_k127_2871332_3 ABC-type uncharacterized transport system K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000491 287.0
YYD2_k127_2871332_4 tRNA processing K06864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002578 270.0
YYD2_k127_2871332_5 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003301 246.0
YYD2_k127_2871332_6 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000003099 223.0
YYD2_k127_2871332_7 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000008638 232.0
YYD2_k127_2871332_8 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( K02823 - - 0.000000000000000000000000000000000000000000000009647 182.0
YYD2_k127_2871332_9 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000004061 129.0
YYD2_k127_2882173_0 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 347.0
YYD2_k127_2882173_1 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000001312 151.0
YYD2_k127_2893600_0 PFAM phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000001471 216.0
YYD2_k127_2893600_1 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000005 191.0
YYD2_k127_290215_0 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006129 547.0
YYD2_k127_290215_1 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008299 442.0
YYD2_k127_290215_2 Carbohydrate family 9 binding domain-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006784 444.0
YYD2_k127_290215_3 Semialdehyde dehydrogenase, NAD binding domain K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000005229 259.0
YYD2_k127_290215_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001846 235.0
YYD2_k127_290215_5 - - - - 0.00000000000000000000000000000000000000000000000001079 187.0
YYD2_k127_290215_6 MEDS: MEthanogen/methylotroph, DcmR Sensory domain - - - 0.000000000000000000000000000000000005579 150.0
YYD2_k127_290215_7 amine dehydrogenase activity - - - 0.00000000000001171 79.0
YYD2_k127_290215_8 Glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.00000001552 62.0
YYD2_k127_290215_9 Belongs to the small heat shock protein (HSP20) family - - - 0.000004184 54.0
YYD2_k127_2914142_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 533.0
YYD2_k127_2914142_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 405.0
YYD2_k127_2914142_10 Belongs to the ompA family K03640 - - 0.0000000000000001762 93.0
YYD2_k127_2914142_11 response regulator K07689 - - 0.0000000000000002716 81.0
YYD2_k127_2914142_12 - - - - 0.00000000000004172 82.0
YYD2_k127_2914142_13 Domain of unknown function (DUF4136) - - - 0.0000002589 60.0
YYD2_k127_2914142_2 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 370.0
YYD2_k127_2914142_3 ATP ADP translocase K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 314.0
YYD2_k127_2914142_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000002022 256.0
YYD2_k127_2914142_5 COG4313 Protein involved in meta-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000000000000005744 229.0
YYD2_k127_2914142_6 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000004881 181.0
YYD2_k127_2914142_7 - - - - 0.000000000000000000000000002001 122.0
YYD2_k127_2914142_8 Domain of unknown function (DUF4136) - - - 0.00000000000000000000000002173 117.0
YYD2_k127_2914142_9 Surface antigen - - - 0.000000000000000003257 98.0
YYD2_k127_2935998_0 Peptidase family M1 domain K01256 - 3.4.11.2 3.654e-256 818.0
YYD2_k127_2935998_1 COG0457 FOG TPR repeat - - - 1.644e-244 773.0
YYD2_k127_2935998_10 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000003297 123.0
YYD2_k127_2935998_2 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 6.337e-226 717.0
YYD2_k127_2935998_3 PFAM glycine cleavage T protein (aminomethyl transferase) - - - 1.592e-199 630.0
YYD2_k127_2935998_4 HupE / UreJ protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008984 281.0
YYD2_k127_2935998_5 Belongs to the proline racemase family K01777 - 5.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000003661 261.0
YYD2_k127_2935998_6 COG1943 Transposase and inactivated derivatives K07491 - - 0.0000000000000000000000000000000000000000000000000000008951 199.0
YYD2_k127_2935998_7 - - - - 0.00000000000000000000000000000000000000000000000008556 181.0
YYD2_k127_2935998_8 HD domain - - - 0.00000000000000000000000000000000000000000000009052 188.0
YYD2_k127_2935998_9 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000000000000000000000000000000000000006033 171.0
YYD2_k127_2948351_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 5.852e-207 668.0
YYD2_k127_2948351_1 COG0534 Na -driven multidrug efflux pump K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 444.0
YYD2_k127_2948351_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000006121 164.0
YYD2_k127_2948351_11 - - - - 0.00000000000000000000000000000000003046 146.0
YYD2_k127_2948351_12 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000000000000000000000000000000001016 155.0
YYD2_k127_2948351_13 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000002072 136.0
YYD2_k127_2948351_14 DinB superfamily - - - 0.0000000000000000000000000000004436 129.0
YYD2_k127_2948351_15 - - - - 0.00000000000000000000000000000069 133.0
YYD2_k127_2948351_16 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000003604 96.0
YYD2_k127_2948351_17 - - - - 0.00000000177 72.0
YYD2_k127_2948351_18 23S rRNA-intervening sequence protein - - - 0.0005457 50.0
YYD2_k127_2948351_19 polysaccharide catabolic process - - - 0.0009708 51.0
YYD2_k127_2948351_2 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004562 362.0
YYD2_k127_2948351_3 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004072 308.0
YYD2_k127_2948351_4 protein-glutamate O-methyltransferase activity K00575,K03408,K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 306.0
YYD2_k127_2948351_5 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 304.0
YYD2_k127_2948351_6 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000004082 241.0
YYD2_k127_2948351_7 - - - - 0.000000000000000000000000000000000000000000000000005861 194.0
YYD2_k127_2948351_8 PFAM GCN5-related N-acetyltransferase K03824 - - 0.0000000000000000000000000000000000000000000000003094 182.0
YYD2_k127_2948351_9 - - - - 0.0000000000000000000000000000000000000000008761 171.0
YYD2_k127_2951167_0 choline dehydrogenase activity - - - 6.132e-254 791.0
YYD2_k127_2951167_1 Glycosyl hydrolase family 63 C-terminal domain - - - 2.181e-235 738.0
YYD2_k127_2951167_2 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002796 281.0
YYD2_k127_2955046_0 PQQ-like domain K05889 - 1.1.2.6 1.19e-197 633.0
YYD2_k127_2955046_1 Pfam Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004571 571.0
YYD2_k127_2955046_10 Beta-lactamase class C and other penicillin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000003511 235.0
YYD2_k127_2955046_11 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000001576 228.0
YYD2_k127_2955046_12 YCII-related domain - - - 0.000000000000000000000000000000000000000000341 162.0
YYD2_k127_2955046_13 ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component - - - 0.000000000000000000000000000000000000000001139 163.0
YYD2_k127_2955046_14 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000003144 174.0
YYD2_k127_2955046_15 EVE domain - - - 0.00000000000000000000000000000000000000002274 156.0
YYD2_k127_2955046_16 - - - - 0.000000000000000000000000000000000000000401 170.0
YYD2_k127_2955046_17 AI-2E family transporter - - - 0.00000000000000000000000000000000000000115 161.0
YYD2_k127_2955046_18 Winged helix DNA-binding domain - - - 0.00000000000000000000000000000002866 132.0
YYD2_k127_2955046_19 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000007608 138.0
YYD2_k127_2955046_2 Histidine kinase K07683 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002827 344.0
YYD2_k127_2955046_20 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000312 127.0
YYD2_k127_2955046_21 lipoprotein localization to outer membrane - - - 0.00000000000000000004092 101.0
YYD2_k127_2955046_22 - - - - 0.00000000002266 77.0
YYD2_k127_2955046_23 Protein of unknown function (DUF2934) - - - 0.000002427 55.0
YYD2_k127_2955046_24 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0001125 48.0
YYD2_k127_2955046_3 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 299.0
YYD2_k127_2955046_4 amino acid-binding ACT domain protein K04518 - 4.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 293.0
YYD2_k127_2955046_5 glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001971 290.0
YYD2_k127_2955046_6 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000001683 263.0
YYD2_k127_2955046_7 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000399 261.0
YYD2_k127_2955046_8 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007967 259.0
YYD2_k127_2955046_9 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000009236 238.0
YYD2_k127_2957343_0 PQQ-like domain K05889 - 1.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 536.0
YYD2_k127_2957343_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 306.0
YYD2_k127_2957343_10 Pfam:DUF556 - - - 0.0000000000000000000000000002764 123.0
YYD2_k127_2957343_11 lyase activity - - - 0.000000000000000001424 101.0
YYD2_k127_2957343_2 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001478 274.0
YYD2_k127_2957343_3 Prokaryotic glutathione synthetase, ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003036 255.0
YYD2_k127_2957343_4 ATP:dephospho-CoA triphosphoribosyl transferase K05966 - 2.4.2.52 0.000000000000000000000000000000000000000000000000000000000000000000002298 247.0
YYD2_k127_2957343_5 Hydantoinase/oxoprolinase K07072 - 2.5.1.131 0.00000000000000000000000000000000000000000000000000000001077 218.0
YYD2_k127_2957343_6 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000398 162.0
YYD2_k127_2957343_7 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000001032 150.0
YYD2_k127_2957343_8 ClpX C4-type zinc finger - - - 0.00000000000000000000000000003442 123.0
YYD2_k127_2957343_9 - K01633,K07144 - 1.13.11.81,2.7.4.31,4.1.2.25,5.1.99.8 0.00000000000000000000000000005424 133.0
YYD2_k127_2959352_0 Lytic polysaccharide mono-oxygenase, cellulose-degrading - - - 0.00000000000000000000000000000000000000000000000006297 194.0
YYD2_k127_2959352_1 - - - - 0.0000000000000000000000000000000000000000001203 163.0
YYD2_k127_2959352_2 HAD-hyrolase-like - - - 0.00000000000000000000000004588 117.0
YYD2_k127_2959875_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 1.809e-198 651.0
YYD2_k127_2959875_1 Peptidoglycan-binding domain 1 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006498 275.0
YYD2_k127_2959875_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000004169 136.0
YYD2_k127_2959875_3 Phage integrase family - - - 0.000000000000000000000002271 111.0
YYD2_k127_2959875_4 - - - - 0.00000000000005015 76.0
YYD2_k127_2959875_5 Phage integrase family - - - 0.0000068 53.0
YYD2_k127_2959875_6 - - - - 0.000009603 54.0
YYD2_k127_296383_0 Rhodanese-like domain K01069 - 3.1.2.6 1.811e-196 630.0
YYD2_k127_296383_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004329 427.0
YYD2_k127_296383_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000001378 259.0
YYD2_k127_296383_3 Belongs to the DapB family K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000002128 225.0
YYD2_k127_2969233_0 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 308.0
YYD2_k127_2969233_1 Protein of unknown function (DUF1569) - - - 0.000000000000000000000000000000000000000005234 159.0
YYD2_k127_297627_0 O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 577.0
YYD2_k127_297627_1 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 485.0
YYD2_k127_297627_10 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000454 143.0
YYD2_k127_297627_11 RmlD substrate binding domain - - - 0.0000000000000000000000000000001773 137.0
YYD2_k127_297627_12 DNA-templated transcription, initiation - - - 0.0000000000000000000000000001357 126.0
YYD2_k127_297627_13 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000001043 111.0
YYD2_k127_297627_15 - - - - 0.00000000000000003717 93.0
YYD2_k127_297627_17 Methyltransferase domain - - - 0.000000001094 70.0
YYD2_k127_297627_18 collagen metabolic process K08677 - - 0.0000005482 58.0
YYD2_k127_297627_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012,K00066 - 1.1.1.132,1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006061 473.0
YYD2_k127_297627_3 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004301 449.0
YYD2_k127_297627_4 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 389.0
YYD2_k127_297627_5 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 348.0
YYD2_k127_297627_6 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 291.0
YYD2_k127_297627_7 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000001182 254.0
YYD2_k127_297627_8 transferase hexapeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000003254 236.0
YYD2_k127_297627_9 3-demethylubiquinone-9 3-O-methyltransferase activity K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000003891 214.0
YYD2_k127_2979288_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 451.0
YYD2_k127_2981193_0 Peptidase family M28 - - - 5e-214 678.0
YYD2_k127_2981193_1 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 533.0
YYD2_k127_2981193_2 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 400.0
YYD2_k127_2981193_3 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 376.0
YYD2_k127_2981193_4 esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005089 357.0
YYD2_k127_2981193_5 COG3473, Maleate cis-trans isomerase K01799 - 5.2.1.1 0.0000000000000000000000000000000002226 150.0
YYD2_k127_2982869_0 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005753 344.0
YYD2_k127_2985133_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 1.345e-222 715.0
YYD2_k127_2985133_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005717 422.0
YYD2_k127_2985133_2 dihydroorotate dehydrogenase activity K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 322.0
YYD2_k127_2985133_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009219 272.0
YYD2_k127_2985133_4 phosphoprotein phosphatase activity K14680 - 6.5.1.3 0.00000000007057 68.0
YYD2_k127_2985133_5 Bacterial-like globin K06886 - - 0.000003363 50.0
YYD2_k127_29880_0 radical SAM domain protein - - - 3.217e-273 855.0
YYD2_k127_29880_1 PFAM Amidohydrolase 3 - - - 7.726e-198 631.0
YYD2_k127_29880_10 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000003157 161.0
YYD2_k127_29880_11 Alpha galactosidase A K07407 - 3.2.1.22 0.0000000000000000000000000000000000001635 161.0
YYD2_k127_29880_12 Alpha galactosidase A K07407 - 3.2.1.22 0.000000000000000000000000000000000000516 160.0
YYD2_k127_29880_13 poly(3-hydroxybutyrate) depolymerase activity K07019 - - 0.00000000000000000000000000000000001304 155.0
YYD2_k127_29880_14 Glycoside hydrolase 97 K01187 - 3.2.1.20 0.00000000000000000000000000000000002775 155.0
YYD2_k127_29880_15 NPCBM/NEW2 domain - - - 0.00000000000000000000002071 116.0
YYD2_k127_29880_16 - - - - 0.00000000000000000000006764 111.0
YYD2_k127_29880_17 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000000001084 100.0
YYD2_k127_29880_18 Staphylococcal nuclease homologues K01174,K07038 - 3.1.31.1 0.000003768 55.0
YYD2_k127_29880_19 beta-galactosidase activity K07019 - - 0.00001179 55.0
YYD2_k127_29880_2 COG2133 Glucose sorbosone dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 503.0
YYD2_k127_29880_3 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000815 361.0
YYD2_k127_29880_4 H( )-stimulated, divalent metal cation uptake system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 349.0
YYD2_k127_29880_5 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 342.0
YYD2_k127_29880_6 6-phosphogluconolactonase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007128 290.0
YYD2_k127_29880_7 6-phosphogluconolactonase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001558 270.0
YYD2_k127_29880_8 NPCBM K07019 - - 0.000000000000000000000000000000000000000000000000000000000000000000001214 271.0
YYD2_k127_29880_9 methyltransferase - - - 0.000000000000000000000000000000000000000000981 167.0
YYD2_k127_2995445_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 572.0
YYD2_k127_2995445_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 467.0
YYD2_k127_2995445_2 - - - - 0.00000000000000000000000000000000000000000001122 168.0
YYD2_k127_2995445_3 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000001364 161.0
YYD2_k127_2995445_4 LexA-binding, inner membrane-associated putative hydrolase K07038 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000006131 162.0
YYD2_k127_2995445_5 peroxiredoxin activity - - - 0.0000000000000000000000000005893 121.0
YYD2_k127_2995445_6 - - - - 0.00000000000000000000008216 111.0
YYD2_k127_2995445_7 - - - - 0.0002826 53.0
YYD2_k127_2997568_0 DNA topological change K03168 - 5.99.1.2 3.477e-199 649.0
YYD2_k127_2997568_1 Belongs to the GMC oxidoreductase family K00108 - 1.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004695 402.0
YYD2_k127_2997568_10 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.0000004418 59.0
YYD2_k127_2997568_2 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 372.0
YYD2_k127_2997568_3 Met-10+ like-protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002847 262.0
YYD2_k127_2997568_4 Ankyrin repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000381 255.0
YYD2_k127_2997568_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000003516 220.0
YYD2_k127_2997568_6 ATP:ADP antiporter activity K01932,K03301 - - 0.0000000000000000000000000006521 121.0
YYD2_k127_2997568_8 ATP-dependent Clp protease adaptor protein ClpS - - - 0.00000000000006886 79.0
YYD2_k127_2997568_9 ATP-dependent Clp protease adaptor protein ClpS - - - 0.00000000002683 67.0
YYD2_k127_300632_0 COG0515 Serine threonine protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000002292 237.0
YYD2_k127_300632_1 DNA-templated transcription, initiation - - - 0.00000000000000000000000000000000000000000000000000000000000001697 225.0
YYD2_k127_300632_2 - - - - 0.00000000000000000000002702 107.0
YYD2_k127_3012145_0 Insulinase (Peptidase family M16) K07263 - - 8.969e-295 932.0
YYD2_k127_3012145_1 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000001758 119.0
YYD2_k127_3012145_2 Methyltransferase domain - - - 0.00000000000000000001065 104.0
YYD2_k127_3012145_3 Ankyrin repeat - - - 0.00000000003873 72.0
YYD2_k127_3020997_0 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 424.0
YYD2_k127_3020997_1 cAMP biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 430.0
YYD2_k127_3020997_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000009948 120.0
YYD2_k127_3024059_0 DNA topological change - - - 3.786e-250 798.0
YYD2_k127_3024059_1 Metallo-beta-lactamase superfamily - - - 3.065e-200 635.0
YYD2_k127_3024059_2 PQQ-like domain K00114 - 1.1.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 513.0
YYD2_k127_3024059_3 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 474.0
YYD2_k127_3024059_4 PFAM Glucose Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006263 383.0
YYD2_k127_3024059_5 Ankyrin repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 370.0
YYD2_k127_3024059_6 Cupin domain - - - 0.00000000000000000005984 95.0
YYD2_k127_3024059_7 - - - - 0.000000000000000003658 93.0
YYD2_k127_3024059_8 Cytochrome c - - - 0.00000000000000001379 97.0
YYD2_k127_3024059_9 - - - - 0.0000000000000000517 92.0
YYD2_k127_3033848_0 glucose sorbosone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 357.0
YYD2_k127_3033848_1 beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 350.0
YYD2_k127_3033848_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003294 284.0
YYD2_k127_3033848_3 PFAM band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004717 265.0
YYD2_k127_3033848_4 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000001195 226.0
YYD2_k127_3033848_5 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000004064 181.0
YYD2_k127_3033848_7 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.000000000000000008983 88.0
YYD2_k127_3033848_8 determination of stomach left/right asymmetry K10407 - - 0.00000000001235 76.0
YYD2_k127_3033848_9 Poly(3-hydroxybutyrate) depolymerase K03932 - - 0.00000002479 57.0
YYD2_k127_3041517_0 Belongs to the transketolase family K00615 - 2.2.1.1 2.259e-221 710.0
YYD2_k127_3041517_1 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008462 611.0
YYD2_k127_3041517_10 Dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009812 277.0
YYD2_k127_3041517_11 Cytidylyltransferase K00983 - 2.7.7.43 0.000000000000000000000000000000000000000000000000000000000007049 214.0
YYD2_k127_3041517_12 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000116 199.0
YYD2_k127_3041517_13 UDP-N-acetylglucosamine 2-epimerase activity - - - 0.000000000000000000000000000000000000000000000000003692 194.0
YYD2_k127_3041517_15 Methyltransferase domain - - - 0.000000000000000000000000162 116.0
YYD2_k127_3041517_17 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000007746 82.0
YYD2_k127_3041517_18 Protein of unknown function (DUF1698) - - - 0.0000003555 62.0
YYD2_k127_3041517_19 PFAM methyltransferase - - - 0.000004589 58.0
YYD2_k127_3041517_2 UDP-N-acetylglucosamine 2-epimerase K08068,K18429 - 3.2.1.183,3.2.1.184 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007452 515.0
YYD2_k127_3041517_3 COGs COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 508.0
YYD2_k127_3041517_4 SPTR N-acetylneuraminic acid synthase, N-terminal domain protein K01654 - 2.5.1.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 491.0
YYD2_k127_3041517_5 NmrA-like family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 436.0
YYD2_k127_3041517_6 NeuB family K01654 - 2.5.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 398.0
YYD2_k127_3041517_7 NAD(P)H-binding K17947 - 5.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008392 372.0
YYD2_k127_3041517_8 cytidylyl-transferase K00983 - 2.7.7.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005235 341.0
YYD2_k127_3041517_9 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 323.0
YYD2_k127_3058613_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K07516 - 1.1.1.35 7.435e-230 734.0
YYD2_k127_3058613_1 GMC oxidoreductase K06151 - 1.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 433.0
YYD2_k127_3058613_2 Protein of unknown function (DUF3667) - - - 0.000000000000000000000000000004661 132.0
YYD2_k127_3058613_3 hydrolase activity, acting on ester bonds K01563 - 3.8.1.5 0.0000000000004003 79.0
YYD2_k127_3058613_5 von willebrand factor type a - - - 0.0009869 50.0
YYD2_k127_3062696_0 PFAM metal-dependent phosphohydrolase, HD sub domain - GO:0003674,GO:0003824,GO:0004112,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008081,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009187,GO:0009214,GO:0009987,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003807 432.0
YYD2_k127_3062696_1 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001206 266.0
YYD2_k127_3062696_3 - - - - 0.000000000000000000000000001372 116.0
YYD2_k127_3062696_4 - - - - 0.000000000000000000001774 105.0
YYD2_k127_3062696_6 BNR repeat-like domain - - - 0.0000000000002574 83.0
YYD2_k127_3062696_7 Belongs to the peptidase S8 family - - - 0.000000001523 70.0
YYD2_k127_3062696_9 PEGA domain K15539 - - 0.000004201 57.0
YYD2_k127_306700_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343,K05573 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.00000000000000000000000000000000000000000006443 164.0
YYD2_k127_306700_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000007635 109.0
YYD2_k127_3068183_0 - - - - 0.00000000000000000000000000004831 130.0
YYD2_k127_3068183_1 - - - - 0.00000000000000000000002565 109.0
YYD2_k127_3068183_2 Pectinesterase K01051 - 3.1.1.11 0.0000000000000000000004104 102.0
YYD2_k127_3075424_0 PQQ enzyme repeat K00117 - 1.1.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 568.0
YYD2_k127_3075424_1 Belongs to the glycosyl hydrolase 28 family - - - 0.00000000000000000000000000000000000000000000000000000000004072 207.0
YYD2_k127_3087656_0 Glycosyl hydrolases family 15 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007397 341.0
YYD2_k127_3087656_1 Glyoxalase-like domain K08234 - - 0.0000000000000000000000000000000000000000000000000000000000000008286 222.0
YYD2_k127_3087656_2 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000002367 175.0
YYD2_k127_308954_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1231.0
YYD2_k127_308954_1 Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP- dependent clade X sub-subfamily K00850 - 2.7.1.11 1.55e-203 640.0
YYD2_k127_308954_2 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 550.0
YYD2_k127_308954_3 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004669 303.0
YYD2_k127_308954_4 Transcriptional regulator sugar kinase K00886 - 2.7.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000376 273.0
YYD2_k127_308954_5 Porin subfamily - - - 0.000000000000000000000000000000000000000000004478 178.0
YYD2_k127_3098598_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 2.916e-313 979.0
YYD2_k127_3098598_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.477e-301 947.0
YYD2_k127_3098598_10 PFAM Nucleotidyl transferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005946 344.0
YYD2_k127_3098598_11 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 332.0
YYD2_k127_3098598_12 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003973 306.0
YYD2_k127_3098598_13 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 304.0
YYD2_k127_3098598_14 Cellulose biosynthesis protein BcsQ K03496 GO:0008150,GO:0022603,GO:0042173,GO:0042174,GO:0043937,GO:0043939,GO:0045595,GO:0045596,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0065007 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 292.0
YYD2_k127_3098598_15 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0031224,GO:0031226,GO:0032940,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051205,GO:0051234,GO:0051259,GO:0051260,GO:0051641,GO:0061024,GO:0065003,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 301.0
YYD2_k127_3098598_16 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005585 286.0
YYD2_k127_3098598_17 ParB-like nuclease domain K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006226 249.0
YYD2_k127_3098598_18 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000002128 235.0
YYD2_k127_3098598_19 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000166 221.0
YYD2_k127_3098598_2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.38e-251 789.0
YYD2_k127_3098598_20 Thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000006592 194.0
YYD2_k127_3098598_22 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000001089 100.0
YYD2_k127_3098598_23 R3H domain protein K06346 - - 0.00000000000000000003374 96.0
YYD2_k127_3098598_24 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000001289 96.0
YYD2_k127_3098598_25 Specifically methylates the N7 position of guanine in position 535 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000005426 96.0
YYD2_k127_3098598_26 Putative regulatory protein - - - 0.000000000000004312 79.0
YYD2_k127_3098598_27 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000007335 76.0
YYD2_k127_3098598_28 Ribosomal protein L34 K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000104 70.0
YYD2_k127_3098598_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 7.709e-212 666.0
YYD2_k127_3098598_4 PFAM UvrD REP helicase K03657 - 3.6.4.12 7.664e-199 644.0
YYD2_k127_3098598_5 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 2.314e-195 627.0
YYD2_k127_3098598_6 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 490.0
YYD2_k127_3098598_7 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010556,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:1990837,GO:2000112 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 484.0
YYD2_k127_3098598_8 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005119 447.0
YYD2_k127_3098598_9 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005205 361.0
YYD2_k127_3107215_0 peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004611 394.0
YYD2_k127_3107215_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000005582 153.0
YYD2_k127_3107215_2 PFAM TonB-dependent Receptor Plug Domain - - - 0.0000000000000000001181 101.0
YYD2_k127_3107215_3 SnoaL-like domain - - - 0.00003483 55.0
YYD2_k127_311077_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006174 624.0
YYD2_k127_311077_1 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 601.0
YYD2_k127_311077_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007491 368.0
YYD2_k127_311077_3 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000001843 158.0
YYD2_k127_311077_4 Protein of unknown function (DUF433) - - - 0.000000000000000000000000000000009082 127.0
YYD2_k127_311077_5 - - - - 0.00000000000001788 83.0
YYD2_k127_311077_6 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.00000003488 55.0
YYD2_k127_311077_7 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0000007625 51.0
YYD2_k127_3131240_0 PQQ-like domain K05889 - 1.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006229 594.0
YYD2_k127_3131240_1 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000001015 258.0
YYD2_k127_3131240_2 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000004182 235.0
YYD2_k127_3131240_3 - - - - 0.00000000000002767 88.0
YYD2_k127_3140644_0 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K04099 - 1.13.11.57 1.103e-202 642.0
YYD2_k127_3140644_1 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 446.0
YYD2_k127_3140644_2 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007499 388.0
YYD2_k127_3140644_3 response to abiotic stimulus K06867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000208 297.0
YYD2_k127_3140644_4 DNA topological change K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000001978 266.0
YYD2_k127_3140644_5 TonB-dependent receptor - - - 0.0000000000000000000000000000000000004312 160.0
YYD2_k127_3140644_6 Universal stress protein family - - - 0.00000000000000000000000000000003071 131.0
YYD2_k127_3140644_7 - - - - 0.0004875 51.0
YYD2_k127_3144108_0 Efflux pump membrane transporter K18299 - - 0.0 1438.0
YYD2_k127_3144108_1 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT K18300 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 428.0
YYD2_k127_3144108_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18298 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009125 392.0
YYD2_k127_3144108_3 COG0657 Esterase lipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 316.0
YYD2_k127_3144108_4 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 306.0
YYD2_k127_3144108_5 helix_turn_helix, Lux Regulon K07684 - - 0.0000000000000000000000000000000000000000000000000000000001293 211.0
YYD2_k127_3144108_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000002373 182.0
YYD2_k127_3144108_7 acyl-CoA dehydrogenase - - - 0.00000000001151 67.0
YYD2_k127_3144108_8 Transcriptional regulator PadR-like family - - - 0.0000000904 54.0
YYD2_k127_315259_0 Male sterility protein K01710,K01784,K12450 - 4.2.1.46,4.2.1.76,5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006159 487.0
YYD2_k127_315259_1 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000635 423.0
YYD2_k127_315259_2 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 430.0
YYD2_k127_315259_3 WbqC-like protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004985 297.0
YYD2_k127_315259_4 Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000171 267.0
YYD2_k127_315259_5 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000001488 233.0
YYD2_k127_315259_7 Acetyltransferase (GNAT) domain K00657 - 2.3.1.57 0.0000000000000000000000000004657 125.0
YYD2_k127_315259_8 PFAM Uncharacterised protein family (UPF0104) K07027 - - 0.00000000000000000008284 102.0
YYD2_k127_3154046_0 DNA topological change K03168 - 5.99.1.2 4.893e-238 760.0
YYD2_k127_3154046_1 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004725 452.0
YYD2_k127_3154046_2 Copper amine oxidase, N2 domain K00276 - 1.4.3.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 435.0
YYD2_k127_3154046_3 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 319.0
YYD2_k127_3154046_4 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005451 304.0
YYD2_k127_3154046_5 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000001329 247.0
YYD2_k127_3154046_6 Amidohydrolase K22213 - 4.1.1.52 0.00000000000000000000000000003583 135.0
YYD2_k127_3173636_0 peptidyl-tyrosine sulfation K01277 - 3.4.14.4 1.668e-263 831.0
YYD2_k127_3173636_1 PFAM Glutamyl glutaminyl-tRNA synthetase, class Ic, catalytic K01886 - 6.1.1.18 3.05e-253 792.0
YYD2_k127_3173636_10 Short-chain dehydrogenase reductase SDR K03793 - 1.5.1.33 0.0000000000000000000000000000000000000000000433 170.0
YYD2_k127_3173636_11 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000003797 97.0
YYD2_k127_3173636_12 - - - - 0.0000000000042 76.0
YYD2_k127_3173636_13 - - - - 0.0000000003586 66.0
YYD2_k127_3173636_2 peptidase S9B dipeptidylpeptidase IV domain protein K01278 - 3.4.14.5 5.759e-198 642.0
YYD2_k127_3173636_3 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009991 507.0
YYD2_k127_3173636_4 Beta-Casp domain K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009134 475.0
YYD2_k127_3173636_5 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006879 450.0
YYD2_k127_3173636_6 - K00262 - 1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 394.0
YYD2_k127_3173636_7 PFAM Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009596 346.0
YYD2_k127_3173636_8 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 334.0
YYD2_k127_3173636_9 PFAM Peptidase M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000005144 247.0
YYD2_k127_318084_0 Cytochrome c-type biogenesis protein K02198 - - 1.038e-235 753.0
YYD2_k127_318084_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 385.0
YYD2_k127_318084_10 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.00000000000000000000000000001648 123.0
YYD2_k127_318084_11 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000008177 127.0
YYD2_k127_318084_12 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000002397 116.0
YYD2_k127_318084_14 - - - - 0.0000005457 61.0
YYD2_k127_318084_16 - - - - 0.00001492 55.0
YYD2_k127_318084_17 von Willebrand factor (vWF) type A domain K07114,K12511 - - 0.00007011 54.0
YYD2_k127_318084_2 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007501 295.0
YYD2_k127_318084_3 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007266 271.0
YYD2_k127_318084_4 Inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000005062 255.0
YYD2_k127_318084_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000003537 216.0
YYD2_k127_318084_6 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.000000000000000000000000000000000000000000000000000000000291 213.0
YYD2_k127_318084_7 Cytochrome C assembly protein K02195 - - 0.0000000000000000000000000000000000000000000003542 174.0
YYD2_k127_318084_8 PFAM ABC transporter K01990,K02193,K09697 - 3.6.3.41,3.6.3.7 0.000000000000000000000000000000000000000008511 165.0
YYD2_k127_318084_9 oligosaccharyl transferase activity K00721 - 2.4.1.83 0.000000000000000000000000000008829 136.0
YYD2_k127_320348_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 422.0
YYD2_k127_320348_1 COG3119 Arylsulfatase A and related enzymes K01138 - - 0.00000000000000000000000000000000113 132.0
YYD2_k127_320348_2 cAMP biosynthetic process K03641 - - 0.000000000000000004843 92.0
YYD2_k127_320348_3 Phage integrase family - - - 0.0000000001639 72.0
YYD2_k127_320348_4 COG3119 Arylsulfatase A and related enzymes K01138 - - 0.00000002064 58.0
YYD2_k127_3220892_0 belongs to the thioredoxin family K05838 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004184 455.0
YYD2_k127_3220892_1 transcriptional regulator K02624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000178 248.0
YYD2_k127_3220892_2 Tetratricopeptide repeat - - - 0.000000001768 70.0
YYD2_k127_3233153_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 1.014e-200 661.0
YYD2_k127_3233153_1 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000005085 239.0
YYD2_k127_3233153_2 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000004601 213.0
YYD2_k127_3233153_3 DNA-templated transcription, initiation - - - 0.0000000000000000000000000000000000000000000000000000009681 202.0
YYD2_k127_3233153_4 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000004116 182.0
YYD2_k127_3251468_0 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 346.0
YYD2_k127_3251468_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001971 274.0
YYD2_k127_3251468_2 PQQ-like domain - - - 0.000000000000000000000000000000000000000000002529 170.0
YYD2_k127_3255294_0 Transposase (IS116 IS110 IS902 family) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003292 312.0
YYD2_k127_3255294_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343,K05573 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000166 162.0
YYD2_k127_3255294_2 - - - - 0.000000000000000000000000007948 113.0
YYD2_k127_3255294_3 Protein of unknown function (DUF433) - - - 0.00000000000000000000000001078 111.0
YYD2_k127_3255294_4 PFAM transposase IS116 IS110 IS902 family - - - 0.000000000000000004747 91.0
YYD2_k127_3257961_0 PFAM NAD dependent epimerase dehydratase family K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004937 304.0
YYD2_k127_3257961_1 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000005199 258.0
YYD2_k127_3257961_2 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000007031 237.0
YYD2_k127_3257961_3 HlyD family secretion protein K01993 - - 0.00000000000000000000000000000000000000000000000000215 201.0
YYD2_k127_3257961_4 transcriptional regulator - - - 0.00000000000000000002718 99.0
YYD2_k127_3257961_5 ABC-type multidrug transport system, ATPase component K01990 - - 0.000000000000000002544 92.0
YYD2_k127_3257961_6 Glyoxalase-like domain K04750 - - 0.0000000000004566 83.0
YYD2_k127_3258528_0 antibiotic biosynthetic process K01434 - 3.5.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004058 623.0
YYD2_k127_3258528_1 PFAM Glycosyl transferase, group 1 K00754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 395.0
YYD2_k127_3258528_2 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009633 290.0
YYD2_k127_3258528_3 deacetylase K01463 - - 0.000000000000000000000000000000000000000000000000000000000001742 217.0
YYD2_k127_3258528_4 Amino acid oxidase - - - 0.00000000000000000000000000000005356 139.0
YYD2_k127_3258528_5 hydrolase (HAD superfamily) K01560,K07025,K08723 - 3.1.3.5,3.8.1.2 0.000000000001861 72.0
YYD2_k127_3266247_0 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000000001 212.0
YYD2_k127_3266247_1 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000004288 192.0
YYD2_k127_3266247_2 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000001152 174.0
YYD2_k127_3266247_3 - - - - 0.00000000000000000000000005673 111.0
YYD2_k127_3266247_4 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000001377 61.0
YYD2_k127_3266247_5 - - - - 0.0000257 55.0
YYD2_k127_3269490_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007306 456.0
YYD2_k127_3269490_1 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006229 406.0
YYD2_k127_3269490_2 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002996 271.0
YYD2_k127_3269490_3 PFAM PemK family protein K07171 - - 0.0000000000000000000000000000000000000005919 153.0
YYD2_k127_3269490_4 PFAM SpoVT AbrB K07172 - - 0.000000000000000000006024 96.0
YYD2_k127_3272039_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000001076 253.0
YYD2_k127_3272039_1 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000002217 173.0
YYD2_k127_3272039_2 Belongs to the globin family K05916 - 1.14.12.17 0.00000000000000000000000000000000000000000004092 164.0
YYD2_k127_3272039_3 response to abiotic stimulus K03086,K06867,K06886 - - 0.000000000000000000000000000000000000001065 152.0
YYD2_k127_3272039_4 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000001322 135.0
YYD2_k127_3272039_5 Belongs to the globin family K05916 - 1.14.12.17 0.000000000000002569 85.0
YYD2_k127_3273870_0 ankyrin repeat K15503 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 327.0
YYD2_k127_3273870_1 DNA topological change K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 313.0
YYD2_k127_3273870_2 SnoaL-like domain K06893 - - 0.000000000000000000000000000000000000006765 150.0
YYD2_k127_3273870_3 - - - - 0.000000000000000000000002183 117.0
YYD2_k127_3277536_0 aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 372.0
YYD2_k127_3277536_1 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 340.0
YYD2_k127_3277536_10 NlpC/P60 family K13694,K21471 - 3.4.17.13 0.0000000000000000000000000000005453 129.0
YYD2_k127_3277536_11 - - - - 0.00000000000004418 82.0
YYD2_k127_3277536_2 extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009152 335.0
YYD2_k127_3277536_3 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001047 251.0
YYD2_k127_3277536_4 Belongs to the DapA family K01714,K22397 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005975,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016830,GO:0016832,GO:0019520,GO:0019752,GO:0032787,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0046176,GO:0046395,GO:0047440,GO:0071704,GO:0072329,GO:1901575 4.1.2.28,4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000007806 244.0
YYD2_k127_3277536_5 HNH nucleases - - - 0.000000000000000000000000000000000000000000000000000000000000000001493 232.0
YYD2_k127_3277536_6 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000001318 206.0
YYD2_k127_3277536_7 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000001982 201.0
YYD2_k127_3277536_8 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000007091 203.0
YYD2_k127_3277536_9 Belongs to the peptidase S8 family K17734 - - 0.00000000000000000000000000000000000005339 154.0
YYD2_k127_3278770_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 573.0
YYD2_k127_3281033_0 Carbamoyl-phosphate synthetase large chain domain protein K01955 - 6.3.5.5 0.0 1362.0
YYD2_k127_3281033_1 TonB dependent receptor K16090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 514.0
YYD2_k127_3281033_2 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 508.0
YYD2_k127_3281033_3 Belongs to the CarA family K01956 GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003808 449.0
YYD2_k127_3281033_4 pkhd-type hydroxylase K07336 GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0033554,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0098771 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 348.0
YYD2_k127_3281033_5 PepSY-associated TM region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 348.0
YYD2_k127_3281033_6 Bacillithiol biosynthesis BshC K22136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 314.0
YYD2_k127_3281033_7 von Willebrand factor, type A - - - 0.00000000000000000000000000000000002347 147.0
YYD2_k127_3281160_0 Sodium/calcium exchanger protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 559.0
YYD2_k127_3281160_1 NapC/NirT cytochrome c family, N-terminal region - GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0044237,GO:0044425,GO:0045333,GO:0055114 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004594 339.0
YYD2_k127_3281160_2 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 319.0
YYD2_k127_3281160_3 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000001172 223.0
YYD2_k127_3281160_4 FCD - - - 0.00000000000000000000000000000000000000000000000000000256 199.0
YYD2_k127_3281160_5 - - - - 0.000000000000000000000000000000000000000000000624 175.0
YYD2_k127_3281160_6 - - - - 0.0000000000000000004869 96.0
YYD2_k127_3281160_7 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.9.3.1 0.000006211 52.0
YYD2_k127_3285256_0 DNA topological change K03168 - 5.99.1.2 1.496e-206 671.0
YYD2_k127_3285256_1 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007137 378.0
YYD2_k127_3294434_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 634.0
YYD2_k127_3294434_1 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009547 569.0
YYD2_k127_3294434_2 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000003957 173.0
YYD2_k127_3294434_3 - - - - 0.0000000000000000000000004189 118.0
YYD2_k127_3298015_0 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007472 383.0
YYD2_k127_3298015_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008486 303.0
YYD2_k127_3298015_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000004122 63.0
YYD2_k127_330690_0 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 416.0
YYD2_k127_330690_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 325.0
YYD2_k127_330690_2 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002111 278.0
YYD2_k127_330690_3 - - - - 0.000000000000000000000000000000000000000000000000000000000007468 223.0
YYD2_k127_330690_4 CAAX protease self-immunity - - - 0.00000000000000000000000000000000000000000000000000001414 210.0
YYD2_k127_330690_5 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000002795 181.0
YYD2_k127_330690_6 DinB family - - - 0.00000000000000000000000000000000003092 148.0
YYD2_k127_330690_7 - - - - 0.0000000000003682 75.0
YYD2_k127_3307401_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916 - 6.3.1.5 1.177e-206 658.0
YYD2_k127_3307401_1 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 567.0
YYD2_k127_3307401_10 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000007865 206.0
YYD2_k127_3307401_11 ABC-2 type transporter K09690 - - 0.000000000000000000000000000000000000000000000257 183.0
YYD2_k127_3307401_12 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000001633 136.0
YYD2_k127_3307401_2 Belongs to the DegT DnrJ EryC1 family K02805 - 2.6.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 503.0
YYD2_k127_3307401_3 Glycosyl transferase, family 2 K10012,K12999,K13670 - 2.4.2.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 305.0
YYD2_k127_3307401_4 beta-fructofuranosidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009184 301.0
YYD2_k127_3307401_5 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001116 284.0
YYD2_k127_3307401_6 WbqC-like protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003709 270.0
YYD2_k127_3307401_7 Hexapeptide repeat of succinyl-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001673 267.0
YYD2_k127_3307401_8 ABC transporter K01990,K09689,K09691 - 3.6.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000001128 269.0
YYD2_k127_3307401_9 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000000000003804 208.0
YYD2_k127_331828_0 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 455.0
YYD2_k127_331828_1 Belongs to the GSP D family K02280 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004048 321.0
YYD2_k127_331828_10 TonB-dependent receptor K16089 - - 0.00000000000000009112 95.0
YYD2_k127_331828_11 Glycosyltransferase family 87 - - - 0.00000000005831 76.0
YYD2_k127_331828_12 TadE-like protein - - - 0.00000002131 62.0
YYD2_k127_331828_13 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000002221 64.0
YYD2_k127_331828_14 AAA domain K02282 - - 0.0000003822 57.0
YYD2_k127_331828_15 Flp Fap pilin component K02651 - - 0.0000292 51.0
YYD2_k127_331828_16 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0007861 52.0
YYD2_k127_331828_2 TIGRFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000783 264.0
YYD2_k127_331828_3 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000194 211.0
YYD2_k127_331828_4 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008677,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.1.1.169 0.0000000000000000000000000000000000000000000000000002189 203.0
YYD2_k127_331828_5 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000008562 192.0
YYD2_k127_331828_6 - - - - 0.0000000000000000000000000000000000000000000000002745 194.0
YYD2_k127_331828_7 flp pilus assembly protein CpaB K02279 - - 0.00000000000000000000000000000000000000000000884 173.0
YYD2_k127_331828_8 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000000000000000000000000000001831 156.0
YYD2_k127_331828_9 PFAM Peptidase A24A, prepilin type IV K02278 - 3.4.23.43 0.000000000000000001102 93.0
YYD2_k127_3333639_0 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007657 475.0
YYD2_k127_3333639_1 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 294.0
YYD2_k127_3333639_2 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000012 247.0
YYD2_k127_3333639_3 - - - - 0.0000000000000000000000000000002418 142.0
YYD2_k127_3333639_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000002645 124.0
YYD2_k127_3335680_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1376.0
YYD2_k127_3335680_1 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 8.993e-294 910.0
YYD2_k127_3335680_11 Cyclic nucleotide-monophosphate binding domain K21867 GO:0003674,GO:0005215,GO:0005216,GO:0005244,GO:0005249,GO:0005261,GO:0005267,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015267,GO:0015318,GO:0015672,GO:0016020,GO:0016021,GO:0022803,GO:0022832,GO:0022836,GO:0022838,GO:0022839,GO:0022843,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042391,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0065007,GO:0065008,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098660,GO:0098662 - 0.000000003085 63.0
YYD2_k127_3335680_12 negative regulation of transcription, DNA-templated K10947 - - 0.00000748 52.0
YYD2_k127_3335680_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 609.0
YYD2_k127_3335680_3 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00627 GO:0003674,GO:0003824,GO:0004742,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016407,GO:0016417,GO:0016418,GO:0016740,GO:0016746,GO:0016747,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030523,GO:0031405,GO:0031406,GO:0032787,GO:0032991,GO:0033293,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045254,GO:0046390,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1902494,GO:1990204 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 457.0
YYD2_k127_3335680_4 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 397.0
YYD2_k127_3335680_5 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004439 375.0
YYD2_k127_3335680_6 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 351.0
YYD2_k127_3335680_7 Beta-lactamase superfamily domain K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000827 252.0
YYD2_k127_3335680_8 uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000224 261.0
YYD2_k127_3335680_9 COG0666 FOG Ankyrin repeat - - - 0.0000000000000000000000000000000000001092 153.0
YYD2_k127_333845_0 response to abiotic stimulus - - - 0.0000000000000000000000000004052 128.0
YYD2_k127_333845_1 Sigma-70, region 4 K03088 - - 0.00000007274 57.0
YYD2_k127_3339844_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 4.14e-321 1007.0
YYD2_k127_3339844_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 2.112e-279 883.0
YYD2_k127_3339844_10 PFAM Histidine triad (HIT) protein K02503 - - 0.000000000000000000000000000000000000000000000013 179.0
YYD2_k127_3339844_11 - - - - 0.000000000000000000000000000000000000001231 157.0
YYD2_k127_3339844_12 BioY family K03523 - - 0.0000000000000000000000000000000000002173 148.0
YYD2_k127_3339844_13 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03635,K21142 - 2.8.1.12 0.000000000000000000000000000000000001464 143.0
YYD2_k127_3339844_14 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.00000000000000000000000000000003429 141.0
YYD2_k127_3339844_15 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000006676 132.0
YYD2_k127_3339844_16 Methyltransferase domain - - - 0.0000000000000000000000000000005082 133.0
YYD2_k127_3339844_17 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000000004251 85.0
YYD2_k127_3339844_18 Haloacid dehalogenase-like hydrolase K07025 - - 0.00000000001156 74.0
YYD2_k127_3339844_19 - - - - 0.0000000003595 63.0
YYD2_k127_3339844_2 Aspartate ammonia-lyase K01744 - 4.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 491.0
YYD2_k127_3339844_20 Mo-molybdopterin cofactor metabolic process K03636,K03637,K03752,K21142 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.77,2.8.1.12,4.6.1.17 0.000000005107 66.0
YYD2_k127_3339844_3 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 455.0
YYD2_k127_3339844_4 PFAM peptidase M16 domain protein K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008701 344.0
YYD2_k127_3339844_5 Phosphomethylpyrimidine kinase K00868,K00941,K03147,K21219 GO:0008150,GO:0040007 2.5.1.3,2.7.1.35,2.7.1.49,2.7.4.7,4.1.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000001006 274.0
YYD2_k127_3339844_6 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000006869 270.0
YYD2_k127_3339844_7 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000004026 247.0
YYD2_k127_3339844_8 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000004163 217.0
YYD2_k127_3339844_9 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.00000000000000000000000000000000000000000000000000003715 198.0
YYD2_k127_3343881_0 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000008534 216.0
YYD2_k127_3343881_1 Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 0.0000000000000000000000000000000000000009999 151.0
YYD2_k127_3343881_2 TIGRFAM Caa(3)-type oxidase, subunit IV K02277 - 1.9.3.1 0.000001084 56.0
YYD2_k127_3382170_0 topoisomerase K02469 - 5.99.1.3 1.738e-248 781.0
YYD2_k127_3382170_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005872 312.0
YYD2_k127_3382170_2 Conserved hypothetical protein (DUF2461) - - - 0.00000000000000000000000000000000000000000000000001289 190.0
YYD2_k127_3390740_0 transport, permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006986 344.0
YYD2_k127_3390740_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 326.0
YYD2_k127_3390740_2 transport, permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 304.0
YYD2_k127_3390740_3 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000008043 187.0
YYD2_k127_3390740_4 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000001122 169.0
YYD2_k127_3408399_0 - - - - 0.0 1064.0
YYD2_k127_3408399_1 - - - - 3.048e-215 694.0
YYD2_k127_3408399_10 Signal peptidase (SPase) II K03101 - 3.4.23.36 0.00001314 59.0
YYD2_k127_3408399_2 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000536 348.0
YYD2_k127_3408399_3 Protein of unknown function (DUF418) K07148 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 334.0
YYD2_k127_3408399_4 Dioxygenase - - - 0.00000000000000000000000000000000000000000000000003626 189.0
YYD2_k127_3408399_5 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000005195 149.0
YYD2_k127_3408399_6 - - - - 0.00000000000000000000000000000000003008 148.0
YYD2_k127_3408399_7 SMART DEAD-like helicase K08282 - 2.7.11.1 0.00000000000000000000000000000002822 138.0
YYD2_k127_3408399_8 alcohol dehydrogenase K00121 - 1.1.1.1,1.1.1.284 0.000000000000000000000000002814 121.0
YYD2_k127_3408399_9 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000001745 94.0
YYD2_k127_3411336_0 ABC transporter - - - 6.558e-259 808.0
YYD2_k127_3411336_1 Belongs to the peptidase M16 family K07263 - - 1.879e-218 709.0
YYD2_k127_3411336_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006906 327.0
YYD2_k127_3411336_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 295.0
YYD2_k127_3411336_4 AAA domain K02450,K12283 - - 0.00000000000000000000000000000000000000000000000000000000000007116 225.0
YYD2_k127_3411336_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000005012 181.0
YYD2_k127_3411336_6 dUTP diphosphatase activity K01520,K13038 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0051259,GO:0051260,GO:0055086,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23,4.1.1.36,6.3.2.5 0.00000000000000000000000000000000008049 141.0
YYD2_k127_3411336_7 - - - - 0.0000001625 56.0
YYD2_k127_3442019_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002215 266.0
YYD2_k127_3442019_2 - - - - 0.00000000001271 76.0
YYD2_k127_3444373_0 C-terminal, D2-small domain, of ClpB protein K11907 - - 0.0 1294.0
YYD2_k127_3444373_1 rhs element vgr protein K11904 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 539.0
YYD2_k127_3444373_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002756 437.0
YYD2_k127_3444373_3 type VI secretion protein K11895 - - 0.000000000000000000000000000000000000000000000000000000000000001834 225.0
YYD2_k127_3448492_0 Pyrrolo-quinoline quinone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004124 284.0
YYD2_k127_3448492_1 PFAM RNA binding S1 domain protein K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004012 280.0
YYD2_k127_3448492_2 Two component transcriptional regulator, winged helix family K02483 - - 0.000000000000000000000000000000001542 141.0
YYD2_k127_3448492_3 Cytochrome c mono- and diheme variants - - - 0.000000000000001453 82.0
YYD2_k127_3448492_4 - - - - 0.000000000000623 73.0
YYD2_k127_3448492_5 Carboxypeptidase regulatory-like domain - - - 0.000000000003679 78.0
YYD2_k127_3467537_0 chromosome segregation K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 330.0
YYD2_k127_3467537_1 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003734 277.0
YYD2_k127_3467537_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002447 260.0
YYD2_k127_3467537_3 Tannase and feruloyl esterase - - - 0.0000000000000000000000000000000000000000000000000000000001546 210.0
YYD2_k127_3467537_4 membrane - - - 0.000000000000000000000000000001468 131.0
YYD2_k127_3467537_5 Transcriptional regulator, LysR - - - 0.000000000000000000000000000023 129.0
YYD2_k127_3467537_6 Oxygenase, catalysing oxidative methylation of damaged DNA K09990 - - 0.000000000000001529 76.0
YYD2_k127_3467537_7 AMP-binding enzyme C-terminal domain K00666,K12507 - - 0.000000004741 66.0
YYD2_k127_3467537_8 Cell wall-active antibiotics response 4TMS YvqF - - - 0.00000003965 65.0
YYD2_k127_347166_0 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000465 356.0
YYD2_k127_347166_1 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000005038 255.0
YYD2_k127_347166_2 transposition, DNA-mediated - - - 0.000000000000000000000000000000000000000000000000000000002691 205.0
YYD2_k127_347166_3 - - - - 0.00000000000000000000000000000005991 140.0
YYD2_k127_3472627_0 PFAM deoxyhypusine synthase K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 454.0
YYD2_k127_3472627_1 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000000000000000000000000000000000000000000000000003198 207.0
YYD2_k127_3472627_2 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000001859 188.0
YYD2_k127_3472627_3 DinB family - - - 0.0000000000000000000000000000000000000000005105 163.0
YYD2_k127_3472627_4 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.000000000000000000000000004708 124.0
YYD2_k127_3472627_5 cytochrome - - - 0.00000000000000000000009594 99.0
YYD2_k127_3472627_6 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.0000000000000000001564 95.0
YYD2_k127_3472627_7 META domain K03929 - - 0.00000000000000001293 89.0
YYD2_k127_3489793_0 PFAM type II secretion system protein E K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 533.0
YYD2_k127_3489793_1 Cellulose biosynthesis protein BcsQ K02282 - - 0.00000000000000000000000000000000009325 150.0
YYD2_k127_3489793_2 Putative Flp pilus-assembly TadE/G-like - - - 0.0000002081 63.0
YYD2_k127_3497249_0 TIGRFAM oligoendopeptidase, M3 family K08602 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 623.0
YYD2_k127_3497249_1 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007442 429.0
YYD2_k127_3497249_10 - - - - 0.0000000000001424 76.0
YYD2_k127_3497249_11 Antibiotic biosynthesis monooxygenase - - - 0.000002145 55.0
YYD2_k127_3497249_2 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008231 397.0
YYD2_k127_3497249_3 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 351.0
YYD2_k127_3497249_4 Uncharacterized conserved protein (COG2071) K09166 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000219 260.0
YYD2_k127_3497249_5 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000762 208.0
YYD2_k127_3497249_6 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000288 188.0
YYD2_k127_3497249_7 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000003415 179.0
YYD2_k127_3497249_8 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000001293 129.0
YYD2_k127_3497249_9 Arginase family K01476 - 3.5.3.1 0.0000000000000000000007851 95.0
YYD2_k127_3506956_0 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003316 265.0
YYD2_k127_3506956_1 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000001749 67.0
YYD2_k127_3507323_0 zinc ion binding K02347,K04477 - - 0.00000000000000000000000000000000000000000000000000000000000001503 234.0
YYD2_k127_3507323_1 Major Facilitator Superfamily - - - 0.0005785 52.0
YYD2_k127_3508097_0 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 436.0
YYD2_k127_3508097_1 ABC-type antimicrobial peptide transport system, permease component - - - 0.00000000000000000000000000000000000000000004338 176.0
YYD2_k127_3510277_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 1.322e-202 661.0
YYD2_k127_3510277_1 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 551.0
YYD2_k127_3510277_2 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002771 280.0
YYD2_k127_3510277_3 electron transfer activity K00428 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000009098 259.0
YYD2_k127_3510277_4 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000000000000000009865 239.0
YYD2_k127_3510277_6 Transcriptional regulatory protein, C terminal - - - 0.00000000000000626 83.0
YYD2_k127_3510277_7 FHA domain K07315 - 3.1.3.3 0.0000000000001311 79.0
YYD2_k127_3510277_8 acetylcholinesterase activity - - - 0.0002447 49.0
YYD2_k127_3516345_0 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 302.0
YYD2_k127_3516345_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000026 133.0
YYD2_k127_3516345_2 - - - - 0.000000000000000000000000005453 121.0
YYD2_k127_3521818_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 467.0
YYD2_k127_3521818_1 HpcH/HpaI aldolase/citrate lyase family K01630,K02510 - 4.1.2.20,4.1.2.52 0.00000000000000000000000000000000000000000000000000000000000003506 225.0
YYD2_k127_3521818_2 - - - - 0.000000000000000000000000000000000000000000000000000005177 201.0
YYD2_k127_352771_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005057 346.0
YYD2_k127_352771_1 Deoxynucleoside kinase K15518 - 2.7.1.113 0.00000000000000000000000000000000000000000000000000000000000000001781 230.0
YYD2_k127_352771_2 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000003673 230.0
YYD2_k127_352771_3 peptidyl-tyrosine sulfation - - - 0.000000000000000004642 96.0
YYD2_k127_3541974_0 - - - - 0.0000000000000000000000000000000000000000001645 173.0
YYD2_k127_3541974_1 - - - - 0.00000000009534 65.0
YYD2_k127_3543422_0 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000003528 244.0
YYD2_k127_3543422_1 Protein of unknown function (DUF1552) - - - 0.000000000002038 68.0
YYD2_k127_3543422_2 domain, Protein - - - 0.0001095 50.0
YYD2_k127_3543526_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 477.0
YYD2_k127_3543526_1 Protein of unknown function (DUF1552) - - - 0.000000000000415 70.0
YYD2_k127_3543526_2 COGs COG5616 integral membrane protein - - - 0.000000000002249 72.0
YYD2_k127_3543526_3 serine threonine protein kinase K08884,K11912 - 2.7.11.1 0.00000001096 61.0
YYD2_k127_3549101_0 PQQ-like domain K00114 - 1.1.2.8 3.019e-225 715.0
YYD2_k127_3549101_1 DegT/DnrJ/EryC1/StrS aminotransferase family K12452 - 1.17.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008336 567.0
YYD2_k127_3549101_2 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00162,K21417 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000819 467.0
YYD2_k127_3549101_3 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K21416 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 358.0
YYD2_k127_3549101_4 Bacterial extracellular solute-binding proteins, family 3 K16254 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003898 284.0
YYD2_k127_3549101_5 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000002505 74.0
YYD2_k127_3549101_6 PFAM NAD dependent epimerase dehydratase family - - - 0.000000000222 62.0
YYD2_k127_3549642_0 PFAM ABC transporter - - - 5.052e-290 899.0
YYD2_k127_3549642_1 Ammonium Transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 563.0
YYD2_k127_3549642_10 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000001601 207.0
YYD2_k127_3549642_11 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000006966 189.0
YYD2_k127_3549642_12 Biotin-lipoyl like K01993 - - 0.0000000000000000000000000000000000000000000001219 182.0
YYD2_k127_3549642_13 Transcriptional regulator - - - 0.00000000000000000000000000005801 133.0
YYD2_k127_3549642_2 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 572.0
YYD2_k127_3549642_3 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 400.0
YYD2_k127_3549642_4 pfam abc K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004712 332.0
YYD2_k127_3549642_5 ANTAR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 314.0
YYD2_k127_3549642_6 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000001028 252.0
YYD2_k127_3549642_7 phospholipase Carboxylesterase - - - 0.000000000000000000000000000000000000000000000000000000000000002709 234.0
YYD2_k127_3549642_8 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000003389 213.0
YYD2_k127_3549642_9 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000001098 207.0
YYD2_k127_355944_0 Protein of unknown function (DUF3089) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 434.0
YYD2_k127_355944_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003859 354.0
YYD2_k127_355944_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 343.0
YYD2_k127_355944_3 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004505 351.0
YYD2_k127_355944_4 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000278 259.0
YYD2_k127_355944_5 - - - - 0.0000000000000000000000000000000000000000000000004683 183.0
YYD2_k127_355944_6 - - - - 0.00000000000000003711 86.0
YYD2_k127_3562048_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001686 256.0
YYD2_k127_3562048_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000001426 138.0
YYD2_k127_3575546_0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01585 - 4.1.1.19 5.72e-286 888.0
YYD2_k127_3575546_1 Threonine synthase N terminus K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009318 382.0
YYD2_k127_3575546_2 Oligopeptidase F K08602 - - 0.000000000000000000000000000000000000000000000000000000000000000000824 245.0
YYD2_k127_3575546_3 Thioesterase superfamily K10806 - - 0.00000000000000000000000000001299 126.0
YYD2_k127_358692_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000023 228.0
YYD2_k127_358692_1 Protein of unknown function (DUF541) K09807 - - 0.00000000000004335 82.0
YYD2_k127_358692_2 - - - - 0.00000000001091 74.0
YYD2_k127_3587106_0 PFAM Aminotransferase class I and II K14267 - 2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 479.0
YYD2_k127_3587106_1 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 422.0
YYD2_k127_3587106_2 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 430.0
YYD2_k127_3587106_3 NHL repeat - - - 0.00000737 56.0
YYD2_k127_3592187_0 Glucose-6-phosphate dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 588.0
YYD2_k127_3592187_1 long-chain fatty acid transporting porin activity K09806 - - 0.000000000000000000000000000000000000000000000000000001306 199.0
YYD2_k127_3592187_2 response to abiotic stimulus K06867 - - 0.00000000000000000000000000000000000000000000000341 194.0
YYD2_k127_3592187_3 6-phosphogluconate dehydrogenase K00033 - 1.1.1.343,1.1.1.44 0.00000000000005654 72.0
YYD2_k127_3593995_2 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.0000001655 64.0
YYD2_k127_3593995_3 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.0001699 55.0
YYD2_k127_3593995_4 PFAM N-acetylneuraminic acid synthase, N-terminal K01654 - 2.5.1.56 0.0007768 49.0
YYD2_k127_3594821_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006893 476.0
YYD2_k127_3594821_1 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000002733 264.0
YYD2_k127_3594821_10 Tetratricopeptide repeat - - - 0.000000002565 64.0
YYD2_k127_3594821_2 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000000000008 204.0
YYD2_k127_3594821_3 Ion channel - - - 0.000000000000000000000000000000000000000001003 160.0
YYD2_k127_3594821_4 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.000000000000000000000000000000000004013 149.0
YYD2_k127_3594821_5 TIGRFAM addiction module antidote protein, HigA family K21498 - - 0.000000000000000000000004086 105.0
YYD2_k127_3594821_6 - - - - 0.00000000000000000008247 101.0
YYD2_k127_3594821_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000002711 78.0
YYD2_k127_3594821_9 Formiminotransferase-cyclodeaminase - - - 0.000000002424 66.0
YYD2_k127_3595218_0 secretion system protein K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 451.0
YYD2_k127_3595218_1 Belongs to the GSP D family K02280 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005535 329.0
YYD2_k127_3595218_10 PFAM Flp Fap pilin component K02651 - - 0.000004929 52.0
YYD2_k127_3595218_2 PFAM SAF domain K02279 - - 0.0000000000000000000000000000000000000004374 160.0
YYD2_k127_3595218_3 transferase activity, transferring glycosyl groups K11936,K14666 - - 0.00000000000000000000000000000000002896 150.0
YYD2_k127_3595218_4 Putative Flp pilus-assembly TadE/G-like - - - 0.00000000000000000000000000000004734 142.0
YYD2_k127_3595218_5 Type IV leader peptidase family K02278 - 3.4.23.43 0.0000000000000000000000000004671 123.0
YYD2_k127_3595218_6 AAA domain K02282 - - 0.0000000000000000000002462 111.0
YYD2_k127_3595218_7 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000007975 70.0
YYD2_k127_3595218_8 TadE-like protein - - - 0.0000002941 62.0
YYD2_k127_3595218_9 ATPase activity - - - 0.0000003437 59.0
YYD2_k127_3598272_0 PFAM Carbamoyltransferase K00612 - - 3.256e-269 840.0
YYD2_k127_3598272_1 chaperone-mediated protein folding K12132 - 2.7.11.1 3.997e-234 755.0
YYD2_k127_3598272_10 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000001497 225.0
YYD2_k127_3598272_11 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000001001 219.0
YYD2_k127_3598272_12 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000001218 211.0
YYD2_k127_3598272_13 PFAM transglutaminase domain protein - - - 0.0000000000000000000000000000000000000000000000000000006305 213.0
YYD2_k127_3598272_14 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000005784 201.0
YYD2_k127_3598272_15 PFAM Glycosyl transferase family 2 K07011 - - 0.00000000000000000000000000000000000000000000007369 180.0
YYD2_k127_3598272_16 RmlD substrate binding domain K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000008664 172.0
YYD2_k127_3598272_17 - - - - 0.0000000000000000000000000004507 119.0
YYD2_k127_3598272_18 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000522 78.0
YYD2_k127_3598272_19 - - - - 0.00000000000002506 79.0
YYD2_k127_3598272_2 UDP-N-acetylglucosamine 2-epimerase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007026 605.0
YYD2_k127_3598272_3 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 475.0
YYD2_k127_3598272_4 Thiazole biosynthesis protein ThiG K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005899 378.0
YYD2_k127_3598272_5 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005621 303.0
YYD2_k127_3598272_6 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004935 313.0
YYD2_k127_3598272_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001417 270.0
YYD2_k127_3598272_8 Fad dependent oxidoreductase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000005669 263.0
YYD2_k127_3598272_9 Glycosyl transferase family group 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000003206 236.0
YYD2_k127_3601434_0 Aldehyde dehydrogenase family K00294 - 1.2.1.88 2.587e-239 750.0
YYD2_k127_3601434_1 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000002972 273.0
YYD2_k127_3601434_2 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002191 253.0
YYD2_k127_3601434_3 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.000000000000000000000000000000001147 130.0
YYD2_k127_3604737_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 400.0
YYD2_k127_3604737_1 alginic acid biosynthetic process K01795 - 5.1.3.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 351.0
YYD2_k127_3604737_2 metallophosphoesterase K07096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 332.0
YYD2_k127_3604737_3 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004628 323.0
YYD2_k127_3604737_4 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001528 297.0
YYD2_k127_3604737_5 Nucleotidyl transferase of unknown function (DUF2204) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001061 271.0
YYD2_k127_3604737_6 Cytochrome P460 - - - 0.00000000000000000000000000000000000000000000000001795 185.0
YYD2_k127_3604737_7 Nodulation protein S (NodS) - - - 0.00000000000000000000000000000000000000003124 169.0
YYD2_k127_3609833_0 Multicopper oxidase - - - 0.0 1026.0
YYD2_k127_3609833_1 WD40 domain protein beta Propeller K12132 - 2.7.11.1 3.278e-194 638.0
YYD2_k127_3609833_3 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000008515 78.0
YYD2_k127_3609833_4 Domain of unknown function DUF1828 - - - 0.00000000000447 67.0
YYD2_k127_3609833_5 Forkhead associated domain - - - 0.000000002592 67.0
YYD2_k127_3609833_6 amine dehydrogenase activity K12132 - 2.7.11.1 0.000000003329 68.0
YYD2_k127_3609833_7 Domain of unknown function DUF1828 - - - 0.000000126 56.0
YYD2_k127_3609833_8 Peptidase, M56 - - - 0.000001086 50.0
YYD2_k127_361229_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016020,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0040007,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 2.187e-246 764.0
YYD2_k127_361229_1 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 471.0
YYD2_k127_361229_2 carboxylic ester hydrolase activity K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 403.0
YYD2_k127_3613558_0 FAD binding domain - - - 9.767e-221 696.0
YYD2_k127_3613558_1 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 464.0
YYD2_k127_3613558_2 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 321.0
YYD2_k127_3613558_3 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000001061 233.0
YYD2_k127_3613558_4 DnaJ molecular chaperone homology domain - - - 0.000000000000000000000000000000000000002211 154.0
YYD2_k127_3613558_5 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000002145 126.0
YYD2_k127_3613558_6 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000001234 110.0
YYD2_k127_3614083_0 PFAM Type II secretion system protein E K02454,K02504,K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 458.0
YYD2_k127_3614083_1 long-chain fatty acid transporting porin activity - - - 0.00000942 57.0
YYD2_k127_3614696_0 Methionine synthase K00548 - 2.1.1.13 0.0 1662.0
YYD2_k127_3614696_1 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 472.0
YYD2_k127_3614696_2 Male sterility protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004506 438.0
YYD2_k127_3614696_3 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 426.0
YYD2_k127_3614696_4 Mitochondrial biogenesis AIM24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 411.0
YYD2_k127_3614696_5 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000009345 258.0
YYD2_k127_3614696_6 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000967 263.0
YYD2_k127_3614696_7 Sigma-70 region 2 K03088 - - 0.0000000000006599 77.0
YYD2_k127_3614696_8 Acetyltransferase (GNAT) family - - - 0.00004623 53.0
YYD2_k127_3618474_0 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006456 448.0
YYD2_k127_3618474_1 - - - - 0.0000000000000000000006961 96.0
YYD2_k127_3624642_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 2.121e-222 703.0
YYD2_k127_3624642_1 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005654 535.0
YYD2_k127_3624642_2 Type II secretion system (T2SS), protein F K02455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009232 420.0
YYD2_k127_3624642_3 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000107 301.0
YYD2_k127_3624642_4 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001657 290.0
YYD2_k127_3624642_5 COGs COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000909 278.0
YYD2_k127_3624642_6 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006473 259.0
YYD2_k127_3624642_7 sigma-54 factor interaction domain-containing protein K02667 - - 0.0000000000000000000000000000001841 127.0
YYD2_k127_3624642_8 Yip1 domain - - - 0.000001168 59.0
YYD2_k127_3630662_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 362.0
YYD2_k127_3630662_1 RNA polymerase, sigma-24 subunit, ECF subfamily K02405 - - 0.00000886 48.0
YYD2_k127_3632541_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1600.0
YYD2_k127_3632541_1 KaiC K08482 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006395 600.0
YYD2_k127_3632541_10 Domain of unknown function (DUF4159) - - - 0.0000000000000002768 83.0
YYD2_k127_3632541_11 - - - - 0.00000000001685 70.0
YYD2_k127_3632541_12 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000003285 75.0
YYD2_k127_3632541_13 COG2154 Pterin-4a-carbinolamine dehydratase K01724 - 4.2.1.96 0.000000002054 65.0
YYD2_k127_3632541_15 Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into K04799 - - 0.000002135 52.0
YYD2_k127_3632541_16 Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into K04799 - - 0.00000377 49.0
YYD2_k127_3632541_2 Multicopper oxidase K04753 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 467.0
YYD2_k127_3632541_3 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04101 - 1.13.11.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009116 404.0
YYD2_k127_3632541_4 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005936 368.0
YYD2_k127_3632541_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002117 274.0
YYD2_k127_3632541_6 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 - - - 0.00000000000000000000000000000000000000000000002408 180.0
YYD2_k127_3632541_7 Aromatic-ring-opening dioxygenase LigAB, LigA subunit - - - 0.0000000000000000000000000000000000008033 145.0
YYD2_k127_3632541_8 DNA topological change - - - 0.0000000000000000000000001906 111.0
YYD2_k127_3632541_9 COG0517, FOG CBS domain - - - 0.00000000000000000000007676 104.0
YYD2_k127_3636146_0 B12 binding domain - - - 1.337e-228 720.0
YYD2_k127_3636146_1 WD40 domain protein beta Propeller K12132 - 2.7.11.1 5.259e-198 649.0
YYD2_k127_3636146_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 336.0
YYD2_k127_3636146_3 Putative restriction endonuclease - - - 0.000000000000000000000000000000000000000000000000000000003185 205.0
YYD2_k127_3636146_4 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000001628 188.0
YYD2_k127_3636146_5 WD40 domain protein beta Propeller - - - 0.00000000000000000000000000000000000000000000000001649 203.0
YYD2_k127_3636146_6 gag-polyprotein putative aspartyl protease - - - 0.00000000000000008606 91.0
YYD2_k127_3649095_0 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 572.0
YYD2_k127_3649095_1 phosphorelay sensor kinase activity K07709,K07710 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 457.0
YYD2_k127_3649095_2 surface antigen K07277 - - 0.00000000000000000000000000000000000000000000000000000000002123 227.0
YYD2_k127_3649095_3 Domain of unknown function (DUF5117) - - - 0.00000000000000000000000002201 112.0
YYD2_k127_3649095_4 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000019 108.0
YYD2_k127_3650933_0 ABC transporter transmembrane region K11085 - - 3.237e-209 662.0
YYD2_k127_3650933_1 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003035 384.0
YYD2_k127_365103_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 570.0
YYD2_k127_365103_1 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 324.0
YYD2_k127_365103_2 Amidohydrolase K07045,K14333,K20941 - 4.1.1.103,4.1.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008584 309.0
YYD2_k127_365103_3 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003726 260.0
YYD2_k127_365103_4 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000001918 188.0
YYD2_k127_365103_5 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01838 - 5.4.2.6 0.000000000000000000000000000000000000000000001131 177.0
YYD2_k127_365103_6 transcriptional regulator - - - 0.00000000000000000000000000000000000000000001028 170.0
YYD2_k127_365103_7 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000001079 137.0
YYD2_k127_3653331_0 Putative cyclase K07130 GO:0003674,GO:0003824,GO:0004061,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 323.0
YYD2_k127_3653331_1 PFAM ATPase associated with various cellular activities AAA_3 - - - 0.000000000000000000000000000000000000000000000000000000000008504 221.0
YYD2_k127_3694393_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 467.0
YYD2_k127_3694393_1 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000006119 216.0
YYD2_k127_3694393_2 PFAM Aminotransferase class I and II K14267 - 2.6.1.17 0.00000000000000000000000003757 109.0
YYD2_k127_3694393_3 Paraquat-inducible protein A - - - 0.00000000000000000000004389 116.0
YYD2_k127_3694393_4 negative regulation of transcription, DNA-templated - - - 0.000000000000000000696 93.0
YYD2_k127_3704044_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007756 393.0
YYD2_k127_3704044_1 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 318.0
YYD2_k127_3704044_10 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000001809 208.0
YYD2_k127_3704044_11 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000024 190.0
YYD2_k127_3704044_12 ethanolamine catabolic process K04027 - - 0.00000000000000000000000000000000000007173 144.0
YYD2_k127_3704044_13 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028,K08697 - - 0.0000000000000000000000000006318 115.0
YYD2_k127_3704044_14 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.0000000000000000000000006272 119.0
YYD2_k127_3704044_15 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 0.000000000000000000003466 95.0
YYD2_k127_3704044_16 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.0000000000000000000344 93.0
YYD2_k127_3704044_17 Tetratricopeptide repeat - - - 0.000000000000000002633 92.0
YYD2_k127_3704044_18 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.0000000000000002234 88.0
YYD2_k127_3704044_19 PFAM YbbR-like protein - - - 0.0000000001328 72.0
YYD2_k127_3704044_2 D-isomer specific 2-hydroxyacid dehydrogenase K00015 - 1.1.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 302.0
YYD2_k127_3704044_20 SMART TRASH domain protein - - - 0.00006789 49.0
YYD2_k127_3704044_3 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 287.0
YYD2_k127_3704044_4 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005696 285.0
YYD2_k127_3704044_5 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003257 270.0
YYD2_k127_3704044_6 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000003799 256.0
YYD2_k127_3704044_7 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002286 254.0
YYD2_k127_3704044_8 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.000000000000000000000000000000000000000000000000000000000000000000002355 244.0
YYD2_k127_3704044_9 PFAM Class II aldolase adducin K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000000000000000007938 239.0
YYD2_k127_3718910_0 Amidohydrolase family - - - 1.226e-204 648.0
YYD2_k127_3718910_1 PFAM SMP-30 Gluconolaconase LRE domain protein K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000001709 259.0
YYD2_k127_3718910_2 TipAS antibiotic-recognition domain K21744 - - 0.00000000000000000000000000000000000000000000000000000000000000000648 233.0
YYD2_k127_3718910_3 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000003809 231.0
YYD2_k127_3718910_4 endonuclease activity K07451 - - 0.00000000000000000000000000000000000000001209 168.0
YYD2_k127_3718910_5 Mo-co oxidoreductase dimerisation domain K17225 - - 0.000000000000000001991 93.0
YYD2_k127_3718910_6 SnoaL-like domain - - - 0.0000000264 63.0
YYD2_k127_3718910_7 SnoaL-like domain - - - 0.0000002764 62.0
YYD2_k127_3721635_0 Carboxylesterase family - - - 0.00000000000000000000000000000000000000000000001848 187.0
YYD2_k127_3721635_1 protein-(glutamine-N5) methyltransferase activity - - - 0.000000000000000000000000007881 117.0
YYD2_k127_3723526_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006882 608.0
YYD2_k127_3723526_1 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 370.0
YYD2_k127_3723526_2 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008885 297.0
YYD2_k127_3723526_3 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006263 289.0
YYD2_k127_3723526_4 TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000001032 236.0
YYD2_k127_3723526_5 RadC-like JAB domain K03630 - - 0.0000000000000000000000000000000000000000000000000008802 191.0
YYD2_k127_3723526_6 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000213 192.0
YYD2_k127_3726842_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 454.0
YYD2_k127_3726842_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005883 317.0
YYD2_k127_3726842_2 Preprotein translocase subunit K03210 - - 0.0000000000000000001005 93.0
YYD2_k127_3726842_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000004049 78.0
YYD2_k127_3735117_0 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 497.0
YYD2_k127_3735117_1 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004628 441.0
YYD2_k127_3735117_10 - - - - 0.000000007762 66.0
YYD2_k127_3735117_2 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 361.0
YYD2_k127_3735117_3 PFAM ABC transporter related K02049 - - 0.000000000000000000000000000000000000000000000000000000003004 222.0
YYD2_k127_3735117_4 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000002644 199.0
YYD2_k127_3735117_5 HD domain - - - 0.000000000000000000000000000000000000000000000008385 193.0
YYD2_k127_3735117_6 hydrolase of the alpha beta K07018 - - 0.0000000000000000000000000000000000000000002568 166.0
YYD2_k127_3735117_7 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000001304 149.0
YYD2_k127_3735117_8 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000002889 141.0
YYD2_k127_3738632_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 8.675e-231 723.0
YYD2_k127_3738632_1 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000007835 209.0
YYD2_k127_3738632_2 transmembrane transport - - - 0.0000000000000000000000000000000000000000000000648 173.0
YYD2_k127_3738632_3 Belongs to the HesB IscA family K15724 - - 0.00000000000000000000000000000002787 130.0
YYD2_k127_3738632_4 Belongs to the Fur family K03711 - - 0.00000000000000000000000004109 121.0
YYD2_k127_3738632_5 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.0000000000000000000000248 107.0
YYD2_k127_3738632_6 ABC transporter, ATP-binding protein K02065 - - 0.00000000002191 74.0
YYD2_k127_3738632_7 Cold-Shock Protein K03704 - - 0.0000000001906 64.0
YYD2_k127_3738632_8 - - - - 0.00001496 57.0
YYD2_k127_3744645_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000734 292.0
YYD2_k127_3744645_1 Polyphosphate AMP phosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001697 234.0
YYD2_k127_3744645_2 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000001983 153.0
YYD2_k127_3744645_3 Glyoxalase-like domain K07032 - - 0.0001534 52.0
YYD2_k127_3760426_0 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 485.0
YYD2_k127_3760426_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 405.0
YYD2_k127_3760426_2 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000006987 239.0
YYD2_k127_3766981_0 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 332.0
YYD2_k127_3766981_1 Belongs to the MlaE permease family K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000106 238.0
YYD2_k127_3766981_2 pfam abc K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000002018 234.0
YYD2_k127_3766981_3 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.0000000000000000000000000000000000000000000000000000000000001212 230.0
YYD2_k127_3766981_4 Histidine kinase-like ATPase domain K01338,K04757,K06379,K08282,K17752 - 2.7.11.1,3.4.21.53 0.00000000000000000000000000000000000000000000000000000002986 206.0
YYD2_k127_3766981_5 BON domain - - - 0.00000000001179 76.0
YYD2_k127_3766981_6 - - - - 0.00006935 45.0
YYD2_k127_3766981_7 Las17-binding protein actin regulator - - - 0.0002641 50.0
YYD2_k127_3779630_0 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 462.0
YYD2_k127_3779630_1 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000005394 259.0
YYD2_k127_3779630_10 energy transducer activity K02487,K03832,K06596 - - 0.0000000000001503 75.0
YYD2_k127_3779630_11 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000004819 59.0
YYD2_k127_3779630_12 YtxH-like protein - - - 0.00003421 49.0
YYD2_k127_3779630_13 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.0002152 45.0
YYD2_k127_3779630_2 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000009953 243.0
YYD2_k127_3779630_3 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000299 226.0
YYD2_k127_3779630_4 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.9 0.000000000000000000000000000000000000000000000000000000002229 206.0
YYD2_k127_3779630_5 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000006276 197.0
YYD2_k127_3779630_6 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000002363 181.0
YYD2_k127_3779630_7 Protein of unknown function (DUF3237) - - - 0.000000000000000000000000000000000000000000005503 169.0
YYD2_k127_3779630_8 SMART Extracellular solute-binding protein, family 3 K02030 - - 0.000000000000000000000000006069 122.0
YYD2_k127_3779630_9 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.00000000000000000000000001642 121.0
YYD2_k127_3814004_0 PFAM peptidase S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 391.0
YYD2_k127_3814004_1 peptidyl-prolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 319.0
YYD2_k127_3814004_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000006933 236.0
YYD2_k127_3814004_3 Protein conserved in bacteria - - - 0.00000089 61.0
YYD2_k127_3821385_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 7.184e-227 732.0
YYD2_k127_3821385_1 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 417.0
YYD2_k127_3821385_2 Zinc transporter K16267 - - 0.000000000000000000000000000000000000000000000000000000000000000000156 237.0
YYD2_k127_3821385_3 BON domain - - - 0.0000000000000000000000000000001377 130.0
YYD2_k127_3821385_4 von Willebrand factor, type A - - - 0.000000000000000000000000005969 124.0
YYD2_k127_3821385_5 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000000000000000000003263 122.0
YYD2_k127_3821385_6 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0001184 53.0
YYD2_k127_3830227_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281 - 1.4.4.2 0.0 1164.0
YYD2_k127_3830227_1 IMP dehydrogenase / GMP reductase domain K00088,K00364 GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205,1.7.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 564.0
YYD2_k127_3830227_10 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000000000004427 130.0
YYD2_k127_3830227_11 ATP binding cassette transporter ABC protein K01990 - - 0.000000000000000000002494 103.0
YYD2_k127_3830227_12 photosystem II stabilization K00703,K02237,K02238 - 2.4.1.21 0.00000000000000006636 87.0
YYD2_k127_3830227_2 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00850,K00895,K21071 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008443,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0046835,GO:0046872,GO:0047334,GO:0071704,GO:1901135 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000769 422.0
YYD2_k127_3830227_3 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004114 413.0
YYD2_k127_3830227_4 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00850,K00895,K21071 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008443,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0046835,GO:0046872,GO:0047334,GO:0071704,GO:1901135 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004366 407.0
YYD2_k127_3830227_5 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009772 393.0
YYD2_k127_3830227_6 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 325.0
YYD2_k127_3830227_7 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000005655 239.0
YYD2_k127_3830227_8 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000001324 156.0
YYD2_k127_3830227_9 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000004039 155.0
YYD2_k127_3832656_0 PFAM S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000001235 193.0
YYD2_k127_3832656_1 Domain of unknown function (DUF5117) - - - 0.0000000000000000000000000000000000000000000003141 174.0
YYD2_k127_3832656_2 - - - - 0.000000000000000000000000009725 124.0
YYD2_k127_3837266_0 PQQ enzyme repeat - - - 5.194e-204 656.0
YYD2_k127_3837266_1 Domain of unknown function (DUF305) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 300.0
YYD2_k127_3837266_2 Domain of unknown function (DUF305) - - - 0.000000000000000000000000000000000000000000000000001306 191.0
YYD2_k127_3837266_3 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000000003094 182.0
YYD2_k127_3840055_0 Integron-associated effector binding protein K13652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002325 274.0
YYD2_k127_3840055_1 Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001771 266.0
YYD2_k127_3840055_2 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000007167 181.0
YYD2_k127_3840055_3 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 0.000000000000000000000000000000006238 132.0
YYD2_k127_3840055_4 - - - - 0.0000000000000000000000000002248 124.0
YYD2_k127_3846152_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01539 - 3.6.3.9 5.343e-308 969.0
YYD2_k127_3846152_1 Carbohydrate phosphorylase K00688 - 2.4.1.1 1.305e-199 638.0
YYD2_k127_3846152_10 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.0000000000000000000003473 102.0
YYD2_k127_3846152_11 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00000000001485 76.0
YYD2_k127_3846152_2 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004591 502.0
YYD2_k127_3846152_3 ABC1 family K03688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 451.0
YYD2_k127_3846152_4 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000001612 154.0
YYD2_k127_3846152_5 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000003743 136.0
YYD2_k127_3846152_6 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000219 138.0
YYD2_k127_3846152_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000255 132.0
YYD2_k127_3846152_8 Universal stress protein family - - - 0.00000000000000000000000005182 119.0
YYD2_k127_3846152_9 PFAM OsmC family protein - - - 0.00000000000000000000000007433 113.0
YYD2_k127_3850399_0 Belongs to the sigma-70 factor family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006297 536.0
YYD2_k127_3850399_1 Peptidase family S41 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003914 349.0
YYD2_k127_3850399_2 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001605 289.0
YYD2_k127_3855089_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003186 264.0
YYD2_k127_3855089_1 PLD-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002127 240.0
YYD2_k127_386324_0 ASPIC and UnbV - - - 1.845e-306 961.0
YYD2_k127_386324_1 Protein kinase domain K12132 - 2.7.11.1 7.439e-234 752.0
YYD2_k127_386324_2 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 587.0
YYD2_k127_386324_3 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006375 529.0
YYD2_k127_386324_4 protein-glutamate O-methyltransferase activity K00575,K03408,K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 314.0
YYD2_k127_386324_5 Copper binding periplasmic protein CusF K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 306.0
YYD2_k127_386324_6 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000001959 199.0
YYD2_k127_386324_7 SpoU rRNA Methylase family - - - 0.000000000000000000000000000000000000000000000008803 176.0
YYD2_k127_386324_8 - - - - 0.000000000000000000002044 109.0
YYD2_k127_386324_9 Beta-lactamase - - - 0.0005343 46.0
YYD2_k127_3875880_0 Dehydrogenase E1 component K11381 - 1.2.4.4 4.678e-263 828.0
YYD2_k127_3875880_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003025 457.0
YYD2_k127_3875880_10 PFAM glycosyl transferase family 2 - - - 0.00000000000000000000002995 101.0
YYD2_k127_3875880_11 Acetyltransferase (GNAT) domain - - - 0.0000000000008213 79.0
YYD2_k127_3875880_2 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007091 439.0
YYD2_k127_3875880_3 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 399.0
YYD2_k127_3875880_4 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 313.0
YYD2_k127_3875880_5 PFAM Rhomboid family - - - 0.00000000000000000000000000000000000000000000000002086 191.0
YYD2_k127_3875880_6 Major Facilitator Superfamily K08223 - - 0.000000000000000000000000000000000000000000000001051 190.0
YYD2_k127_3875880_7 Cupin 2, conserved barrel - - - 0.0000000000000000000000000000000000000000000001837 171.0
YYD2_k127_3875880_8 PFAM Cupin 2, conserved barrel - - - 0.00000000000000000000000000000000006938 136.0
YYD2_k127_3875880_9 Yqey-like protein K09117 - - 0.0000000000000000000000000000002781 137.0
YYD2_k127_3880448_0 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 493.0
YYD2_k127_3880448_1 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009244 463.0
YYD2_k127_3880448_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 448.0
YYD2_k127_3880448_3 amino acid K03294,K13868 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008359 342.0
YYD2_k127_3880448_4 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007296 302.0
YYD2_k127_3880448_5 Belongs to the glutaminase family K01425 - 3.5.1.2 0.000000000000000000000000000000000000000000000000000000000000005332 224.0
YYD2_k127_3880448_6 - - - - 0.0000000000000000000000000000000000000000001617 175.0
YYD2_k127_3880896_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 2.577e-271 861.0
YYD2_k127_3880896_1 PFAM peptidase - - - 5.772e-195 622.0
YYD2_k127_3880896_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005669 302.0
YYD2_k127_3880896_3 2Fe-2S -binding domain protein K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000496 245.0
YYD2_k127_3880896_4 Cytidine and deoxycytidylate deaminase zinc-binding region - - - 0.00000000000000000000000000000000000000000000000000000000000000008735 229.0
YYD2_k127_3880896_5 Predicted membrane protein (DUF2306) - - - 0.000000000000000000000000000001237 126.0
YYD2_k127_388467_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 519.0
YYD2_k127_388467_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 500.0
YYD2_k127_388467_10 Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 K00523 - 1.17.1.1 0.00000000000000000000000000000000000002428 166.0
YYD2_k127_388467_11 Methyltransferase domain - - - 0.00000000000000000000000000000000000003425 153.0
YYD2_k127_388467_12 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000002268 114.0
YYD2_k127_388467_13 general stress protein - - - 0.0000000000000000003134 93.0
YYD2_k127_388467_14 PFAM Uncharacterised BCR, COG1649 K05988 - 3.2.1.11 0.0000000000000000005855 100.0
YYD2_k127_388467_15 Polymer-forming cytoskeletal - - - 0.00000000000000003753 88.0
YYD2_k127_388467_16 General stress protein K06884 - - 0.000000000000009754 76.0
YYD2_k127_388467_2 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 482.0
YYD2_k127_388467_3 ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005605 395.0
YYD2_k127_388467_4 PFAM Permease family K06901 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 364.0
YYD2_k127_388467_5 HI0933-like protein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009441 356.0
YYD2_k127_388467_6 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 325.0
YYD2_k127_388467_7 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007442 317.0
YYD2_k127_388467_8 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000001164 168.0
YYD2_k127_388467_9 ferredoxin-NADP+ reductase activity - - - 0.0000000000000000000000000000000000000002314 162.0
YYD2_k127_3911003_0 Malate synthase K01638 - 2.3.3.9 2.421e-299 939.0
YYD2_k127_3911003_1 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000000007353 201.0
YYD2_k127_3911003_2 Endoribonuclease L-PSP - - - 0.0000000000000000000009118 95.0
YYD2_k127_3911003_3 RDD family - - - 0.0000000642 61.0
YYD2_k127_3916579_0 DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 564.0
YYD2_k127_3955474_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002672 416.0
YYD2_k127_3955474_1 PFAM aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008922 329.0
YYD2_k127_3955474_2 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 308.0
YYD2_k127_3955474_3 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000001076 247.0
YYD2_k127_3955474_4 PFAM phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.000000000000000000000000001736 127.0
YYD2_k127_3955474_5 BON domain - - - 0.00000000000000000197 97.0
YYD2_k127_3958651_0 peptidoglycan-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 304.0
YYD2_k127_3958651_1 Peptidase family M23 K21472 - - 0.0000000000000000000000000000000000000000000000000000009841 199.0
YYD2_k127_39615_0 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000001412 203.0
YYD2_k127_39615_1 Glycine cleavage system regulatory protein - - - 0.0000000000000000000000000000000000000000001244 164.0
YYD2_k127_39615_2 - - - - 0.00007821 51.0
YYD2_k127_3964511_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 424.0
YYD2_k127_3964511_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006088 323.0
YYD2_k127_3964511_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000005278 187.0
YYD2_k127_3964511_3 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000001469 90.0
YYD2_k127_3968303_0 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 496.0
YYD2_k127_3968303_1 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000005093 257.0
YYD2_k127_3987405_0 Dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005143 499.0
YYD2_k127_3987405_1 Rhodanese Homology Domain - - - 0.00000000000000000000002448 99.0
YYD2_k127_3987405_2 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007,K21787 - 2.7.9.2 0.000000000000000000004107 94.0
YYD2_k127_4036783_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000003828 268.0
YYD2_k127_4036783_1 Adenylate cyclase - - - 0.0000000000000009418 91.0
YYD2_k127_4069453_0 transcriptional Regulator, LysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009058 283.0
YYD2_k127_4069453_1 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000000006874 207.0
YYD2_k127_4069453_2 PFAM TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000003763 158.0
YYD2_k127_4069892_0 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007889 400.0
YYD2_k127_4069892_1 - K02172 - - 0.00000000000000000000000000000000000002605 154.0
YYD2_k127_4069892_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000001076 103.0
YYD2_k127_4071368_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007826 580.0
YYD2_k127_4071368_1 PFAM Prenyltransferase squalene oxidase K06045 - 4.2.1.129,5.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 324.0
YYD2_k127_4071368_2 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000001561 145.0
YYD2_k127_4072146_0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K15242,K15975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 326.0
YYD2_k127_4072146_1 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000002961 231.0
YYD2_k127_4072146_2 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.00000000000000000000000000000000000000001285 167.0
YYD2_k127_4072146_3 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000008439 103.0
YYD2_k127_4072146_4 TonB-dependent receptor - - - 0.000000004325 70.0
YYD2_k127_407715_0 PFAM Type II secretion system protein E K02454,K02504,K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004669 313.0
YYD2_k127_407715_1 long-chain fatty acid transporting porin activity - - - 0.0001606 53.0
YYD2_k127_4087858_0 von Willebrand factor, type A K07114 - - 7.264e-220 701.0
YYD2_k127_4087858_1 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001441 268.0
YYD2_k127_4087858_2 - - - - 0.000000000000000001386 96.0
YYD2_k127_4087858_3 Carboxypeptidase regulatory-like domain - - - 0.00000000001975 72.0
YYD2_k127_4092741_0 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 374.0
YYD2_k127_4092741_1 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000282 271.0
YYD2_k127_4092741_2 PFAM von Willebrand factor type A K07114,K12511 - - 0.0000000000000000000000000000000000000000000000000000000000000000079 236.0
YYD2_k127_4092741_3 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.00000000000000000000000000000001319 141.0
YYD2_k127_4092741_4 - - - - 0.00000000000000001453 92.0
YYD2_k127_4109461_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 303.0
YYD2_k127_4109461_1 AAA domain, putative AbiEii toxin, Type IV TA system K02028 - 3.6.3.21 0.000000000000000000000000007956 111.0
YYD2_k127_4109461_2 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000914 85.0
YYD2_k127_4123035_0 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 603.0
YYD2_k127_4123035_1 VWA domain containing CoxE-like protein K07161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 334.0
YYD2_k127_4123035_2 Polyketide cyclase / dehydrase and lipid transport K09386 - - 0.000000000000000000000000000159 132.0
YYD2_k127_4123035_3 protocatechuate 3,4-dioxygenase activity - - - 0.0000007077 61.0
YYD2_k127_4125535_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1214.0
YYD2_k127_4125535_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000001803 133.0
YYD2_k127_4125535_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0009028 47.0
YYD2_k127_4126948_0 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000009245 246.0
YYD2_k127_4126948_1 - - - - 0.00000000000000000000000000000000000000006054 155.0
YYD2_k127_4127558_0 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 316.0
YYD2_k127_4127558_1 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000000000000005965 214.0
YYD2_k127_4127558_2 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000003088 150.0
YYD2_k127_4132600_0 decarboxylase K01607 - 4.1.1.44 0.00000000000000000000000000001446 127.0
YYD2_k127_4132600_1 membrane organization K07277,K09800 - - 0.00000004048 64.0
YYD2_k127_4136587_0 PFAM peptidase S9 prolyl oligopeptidase active site domain protein K01322,K01354 - 3.4.21.26,3.4.21.83 4.997e-248 784.0
YYD2_k127_4136587_1 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 606.0
YYD2_k127_4136587_10 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.0002458 47.0
YYD2_k127_4136587_11 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.0004643 49.0
YYD2_k127_4136587_2 Inorganic ion transport and metabolism K03319 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 585.0
YYD2_k127_4136587_3 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006311 495.0
YYD2_k127_4136587_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 311.0
YYD2_k127_4136587_6 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000008398 153.0
YYD2_k127_4136587_7 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000001611 150.0
YYD2_k127_4136587_8 - - - - 0.000000000000000000000000000001094 128.0
YYD2_k127_4136587_9 - - - - 0.000000000000000496 83.0
YYD2_k127_4136780_0 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 342.0
YYD2_k127_4136780_1 - - - - 0.00000000000000000000000000000000000000000000000000000000008779 209.0
YYD2_k127_4136780_10 - - - - 0.00000000001045 73.0
YYD2_k127_4136780_11 PFAM Aminotransferase - - - 0.0000000001131 66.0
YYD2_k127_4136780_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000001747 165.0
YYD2_k127_4136780_3 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000011 174.0
YYD2_k127_4136780_4 Phosphoglycerate mutase family K01834 - 5.4.2.11 0.000000000000000000000000000000000006184 143.0
YYD2_k127_4136780_5 - - - - 0.000000000000000000000001025 113.0
YYD2_k127_4136780_6 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000004285 102.0
YYD2_k127_4136780_8 Tellurite resistance protein TehB - - - 0.000000000000000002533 93.0
YYD2_k127_4136780_9 Methyltransferase - - - 0.00000000000881 75.0
YYD2_k127_4157425_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001255 260.0
YYD2_k127_4157425_1 - - - - 0.000000000000000000000000000000000000000000000000000000000002473 229.0
YYD2_k127_4157425_2 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000638 155.0
YYD2_k127_4157425_3 PA14 - - - 0.0000000000000000000000000000000005238 149.0
YYD2_k127_4164401_0 Wzt C-terminal domain K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008261 400.0
YYD2_k127_4164401_1 ABC-2 type transporter K09690 - - 0.00000000000000005354 92.0
YYD2_k127_4164401_2 - - - - 0.0000000000001918 73.0
YYD2_k127_4172633_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1156.0
YYD2_k127_4172633_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004561 402.0
YYD2_k127_4172633_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000001339 254.0
YYD2_k127_4172633_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000001031 242.0
YYD2_k127_4172633_4 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000001766 159.0
YYD2_k127_4176203_0 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 419.0
YYD2_k127_4176203_1 domain, Protein - - - 0.000000001484 68.0
YYD2_k127_4176507_0 DNA topological change K03168 - 5.99.1.2 5.355e-213 690.0
YYD2_k127_4176507_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005941 552.0
YYD2_k127_4176507_10 Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001889 269.0
YYD2_k127_4176507_11 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000005287 233.0
YYD2_k127_4176507_12 PFAM von Willebrand factor type A K07114,K12511 - - 0.000000000000000000000000000000000000000000000000000000007837 212.0
YYD2_k127_4176507_13 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000000000002389 184.0
YYD2_k127_4176507_14 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000004359 185.0
YYD2_k127_4176507_15 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000003491 179.0
YYD2_k127_4176507_16 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000008392 148.0
YYD2_k127_4176507_17 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.00000000000000000000000000000005746 132.0
YYD2_k127_4176507_18 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.0000000000000000000000000000001761 132.0
YYD2_k127_4176507_19 oxidoreductase activity - - - 0.0000000000000000000000000001641 133.0
YYD2_k127_4176507_20 PFAM Methyltransferase type 11 - - - 0.0000000000000000000000000002148 123.0
YYD2_k127_4176507_21 ankyrin repeat - - - 0.000000000000000000000000537 121.0
YYD2_k127_4176507_22 cheY-homologous receiver domain - - - 0.000000000000000000000001025 109.0
YYD2_k127_4176507_23 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000371 83.0
YYD2_k127_4176507_25 - - - - 0.000000000000000154 89.0
YYD2_k127_4176507_26 3D domain - - - 0.00000000000000632 83.0
YYD2_k127_4176507_27 - - - - 0.0000000000007649 78.0
YYD2_k127_4176507_28 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000005273 71.0
YYD2_k127_4176507_29 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000001237 66.0
YYD2_k127_4176507_3 Phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006598 477.0
YYD2_k127_4176507_30 Belongs to the phycobilisome linker protein family K05378 - - 0.0000008848 60.0
YYD2_k127_4176507_31 Domain of unknown function (DUF4115) K15539 - - 0.000003001 59.0
YYD2_k127_4176507_33 InterProIPR000673 IPR000780 IPR013656 IPR003661 IPR 003594 IPR005467 IPR009082 - - - 0.00001352 56.0
YYD2_k127_4176507_34 EF hand - - - 0.00002039 56.0
YYD2_k127_4176507_35 Domain of unknown function (DUF4115) - - - 0.00003423 57.0
YYD2_k127_4176507_36 general stress protein - - - 0.0001444 49.0
YYD2_k127_4176507_4 X-Pro dipeptidyl-peptidase (S15 family) K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 435.0
YYD2_k127_4176507_5 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005599 452.0
YYD2_k127_4176507_6 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003858 391.0
YYD2_k127_4176507_7 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009218 371.0
YYD2_k127_4176507_8 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008509 351.0
YYD2_k127_4176507_9 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001157 284.0
YYD2_k127_4180840_0 electron transfer activity - - - 0.000000000000000000000000000000000000003157 161.0
YYD2_k127_4188904_0 - K13582,K13924,K15580 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 445.0
YYD2_k127_4188904_1 mitochondrial gene expression - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 372.0
YYD2_k127_4188904_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004743 288.0
YYD2_k127_4188904_3 Alkaline phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003633 297.0
YYD2_k127_4188904_4 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000003397 199.0
YYD2_k127_4199335_0 Insulinase (Peptidase family M16) K07263 - - 0.0 1026.0
YYD2_k127_4199335_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 1.027e-202 637.0
YYD2_k127_4199335_10 Diphthamide synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000668 276.0
YYD2_k127_4199335_11 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009312 255.0
YYD2_k127_4199335_12 PFAM Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000008578 236.0
YYD2_k127_4199335_13 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000006998 228.0
YYD2_k127_4199335_14 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000006111 237.0
YYD2_k127_4199335_15 Phosphorylase superfamily - - - 0.00000000000000000000000000000000000000000000000000001434 197.0
YYD2_k127_4199335_16 endonuclease III K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000209 194.0
YYD2_k127_4199335_17 Diphthamide synthase - - - 0.00000000000000000000000000000000000000000000009782 179.0
YYD2_k127_4199335_18 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.000000000000000000000000000000000000000000003554 168.0
YYD2_k127_4199335_19 methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000001209 158.0
YYD2_k127_4199335_2 PFAM UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 625.0
YYD2_k127_4199335_20 proteolysis - - - 0.00000000000000000000000000000000000003208 148.0
YYD2_k127_4199335_21 Transcriptional regulator - - - 0.0000000000000000000000000000000000005675 144.0
YYD2_k127_4199335_22 PFAM heat shock protein DnaJ K04082 - - 0.0000000000000000000000000000000001959 142.0
YYD2_k127_4199335_23 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.000000000000000000000000000000001826 140.0
YYD2_k127_4199335_24 PFAM ATP-binding region, ATPase domain protein K02486 - 2.7.13.3 0.000000000000000000000000000000003143 145.0
YYD2_k127_4199335_25 Periplasmic binding protein K02016 - - 0.00000000000000000000000000000004333 139.0
YYD2_k127_4199335_26 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000001634 127.0
YYD2_k127_4199335_27 FeS assembly protein IscX - - - 0.000000000000000000002608 94.0
YYD2_k127_4199335_28 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000001258 86.0
YYD2_k127_4199335_29 - - - - 0.0004983 49.0
YYD2_k127_4199335_3 Glycosyltransferase family 20 K16055 - 2.4.1.15,3.1.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548 572.0
YYD2_k127_4199335_4 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 553.0
YYD2_k127_4199335_5 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K11779,K11784,K18285 - 1.21.98.1,2.5.1.120,2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003305 466.0
YYD2_k127_4199335_6 acyl-CoA transferase carnitine dehydratase K18702 - 2.8.3.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 424.0
YYD2_k127_4199335_7 Belongs to the cysteine synthase cystathionine beta- synthase family K12339,K21148 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0032991,GO:0033847,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.113,2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 396.0
YYD2_k127_4199335_8 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006853 355.0
YYD2_k127_4199335_9 ABC transporter substrate-binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009948 333.0
YYD2_k127_4224788_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 593.0
YYD2_k127_4224788_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 346.0
YYD2_k127_4224788_2 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 310.0
YYD2_k127_4247647_0 Flavin containing amine oxidoreductase - - - 2.8e-225 715.0
YYD2_k127_4247647_1 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008231 397.0
YYD2_k127_4247647_2 Adenylate Guanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 359.0
YYD2_k127_4247647_3 cytolysis - - - 0.000000000000000000000000000000000000000001361 168.0
YYD2_k127_4247647_4 - - - - 0.0000000001973 70.0
YYD2_k127_4248103_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 559.0
YYD2_k127_4248103_1 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008095 535.0
YYD2_k127_4248103_10 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.0000008438 60.0
YYD2_k127_4248103_2 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 352.0
YYD2_k127_4248103_3 PFAM Histidine triad (HIT) protein K19710 - 2.7.7.53 0.00000000000000000000000000000000000000000000003639 175.0
YYD2_k127_4248103_4 energy transducer activity K03832 - - 0.000000000000000000000000000000000000000000004006 186.0
YYD2_k127_4248103_5 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000005846 165.0
YYD2_k127_4248103_6 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.00000000000000000000000000000000001252 138.0
YYD2_k127_4248103_7 Penicillinase repressor - - - 0.00000000000000000000000000000000008667 137.0
YYD2_k127_4248103_8 energy transducer activity - - - 0.000000000000000013 93.0
YYD2_k127_4248103_9 salt-induced outer membrane protein K07283 - - 0.0000001745 61.0
YYD2_k127_4258040_0 protein kinase activity K13582,K13924 - 2.1.1.80,3.1.1.61 5.361e-243 797.0
YYD2_k127_4258040_1 peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 404.0
YYD2_k127_4258040_2 translation initiation factor activity K03699 - - 0.000000000000000000000000000000000000000000000001467 184.0
YYD2_k127_4258040_3 SPFH domain / Band 7 family - - - 0.000000000000000000000000000000000000000000000001932 185.0
YYD2_k127_4258040_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000001858 128.0
YYD2_k127_4258040_5 - - - - 0.000000000000000000000000000005871 126.0
YYD2_k127_4258040_6 calcium- and calmodulin-responsive adenylate cyclase activity K11904 - - 0.000006811 58.0
YYD2_k127_426096_0 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K03438,K13292 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009249,GO:0009987,GO:0010467,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0031224,GO:0031226,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0051604,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.1.1.199 0.0000000000000000000000000000000000000000008846 167.0
YYD2_k127_426096_1 von Willebrand factor, type A - - - 0.000000000000000000000000899 120.0
YYD2_k127_426599_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 390.0
YYD2_k127_426599_1 - - - - 0.000000000000000000002934 98.0
YYD2_k127_426599_2 - - - - 0.000000000000000000811 94.0
YYD2_k127_42913_0 Elongation factor G, domain IV K02355 - - 1.093e-222 711.0
YYD2_k127_42913_1 Ammonium Transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 565.0
YYD2_k127_42913_10 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 GO:0003674,GO:0003824,GO:0004015,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.6.1.62 0.000000000000000000000002002 104.0
YYD2_k127_42913_11 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000005715 91.0
YYD2_k127_42913_12 - - - - 0.000000000000000051 91.0
YYD2_k127_42913_13 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000004556 71.0
YYD2_k127_42913_14 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000000888 70.0
YYD2_k127_42913_15 Phosphoadenosine phosphosulfate reductase family K19170 - - 0.0000004033 59.0
YYD2_k127_42913_16 - - - - 0.0001027 53.0
YYD2_k127_42913_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 478.0
YYD2_k127_42913_3 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008379 458.0
YYD2_k127_42913_4 Metallopeptidase family M24 K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 314.0
YYD2_k127_42913_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 293.0
YYD2_k127_42913_6 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000007862 181.0
YYD2_k127_42913_7 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000002417 179.0
YYD2_k127_42913_8 Ribosomal protein L17 K02879 - - 0.000000000000000000000000000000000007223 143.0
YYD2_k127_42913_9 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000775 138.0
YYD2_k127_4295595_0 metallocarboxypeptidase activity K14054 - - 0.0 1105.0
YYD2_k127_4295595_1 MatE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 591.0
YYD2_k127_4295595_10 sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 321.0
YYD2_k127_4295595_11 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 308.0
YYD2_k127_4295595_12 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 301.0
YYD2_k127_4295595_13 Belongs to the peptidase M48B family K03799 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0031224,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044425,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008484 300.0
YYD2_k127_4295595_14 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000006594 181.0
YYD2_k127_4295595_15 - - - - 0.0000000000000000000000000000000000000000000002812 182.0
YYD2_k127_4295595_16 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000003714 160.0
YYD2_k127_4295595_18 PFAM Xylose isomerase - - - 0.00000002514 65.0
YYD2_k127_4295595_19 Putative zinc- or iron-chelating domain K18475 - - 0.0000002418 63.0
YYD2_k127_4295595_2 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004756 564.0
YYD2_k127_4295595_20 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.0000004185 61.0
YYD2_k127_4295595_3 LOR/SDH bifunctional enzyme conserved region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000579 461.0
YYD2_k127_4295595_4 alkaline phosphatase K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000428 452.0
YYD2_k127_4295595_5 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 404.0
YYD2_k127_4295595_6 aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 383.0
YYD2_k127_4295595_7 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005474 366.0
YYD2_k127_4295595_8 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007109 344.0
YYD2_k127_4295595_9 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008435 348.0
YYD2_k127_4295624_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 349.0
YYD2_k127_4295624_1 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000000000000000000000000000000000000000000000000000001103 226.0
YYD2_k127_4295624_2 Domain of unknown function (DUF4115) - - - 0.00000000008431 72.0
YYD2_k127_4295624_3 lactoylglutathione lyase activity - - - 0.00000003371 58.0
YYD2_k127_4302288_0 Carboxypeptidase regulatory-like domain - - - 2.138e-264 852.0
YYD2_k127_4302288_1 Domain of unknown function (DUF5060) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 536.0
YYD2_k127_4302288_10 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 0.00002937 50.0
YYD2_k127_4302288_2 Major Facilitator Superfamily K03535 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 349.0
YYD2_k127_4302288_3 Xylose isomerase-like TIM barrel K01805 - 5.3.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000187 265.0
YYD2_k127_4302288_4 Xylose isomerase-like TIM barrel K01805 - 5.3.1.5 0.00000000000000000000000000000000000000000000000000001002 201.0
YYD2_k127_4302288_5 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000001998 185.0
YYD2_k127_4302288_6 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000479 115.0
YYD2_k127_4302288_8 DNA ligase K01971 - 6.5.1.1 0.00000000001143 71.0
YYD2_k127_4302288_9 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.0000004147 56.0
YYD2_k127_4303079_0 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 390.0
YYD2_k127_4303079_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008028 379.0
YYD2_k127_4303079_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000007893 207.0
YYD2_k127_4303079_3 Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.0000001772 54.0
YYD2_k127_4307699_0 Uncharacterised protein family (UPF0182) K09118 - - 9.298e-249 799.0
YYD2_k127_4307699_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006583 504.0
YYD2_k127_4307699_10 PBS lyase HEAT-like repeat - - - 0.000000000000000002103 100.0
YYD2_k127_4307699_12 Belongs to the HSP15 family K04762 - - 0.0000000000000009321 82.0
YYD2_k127_4307699_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006103 486.0
YYD2_k127_4307699_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 439.0
YYD2_k127_4307699_4 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 306.0
YYD2_k127_4307699_5 SurA N-terminal domain K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000004083 203.0
YYD2_k127_4307699_6 WYL domain K13572 - - 0.000000000000000000000000000000000000000000004872 176.0
YYD2_k127_4307699_7 tRNA pseudouridine synthase activity K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000001248 165.0
YYD2_k127_4307699_8 DNA-templated transcription, initiation - - - 0.000000000000000000000000009676 115.0
YYD2_k127_4307699_9 tRNA pseudouridine synthase activity K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000006646 102.0
YYD2_k127_4319918_0 FtsX-like permease family K02004 - - 4.136e-225 721.0
YYD2_k127_4319918_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006852 566.0
YYD2_k127_4319918_10 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005115 304.0
YYD2_k127_4319918_11 HlyD family secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000041 272.0
YYD2_k127_4319918_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002764 256.0
YYD2_k127_4319918_13 - K02172 - - 0.000000000000000000000000000000000000000000001753 184.0
YYD2_k127_4319918_14 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000001651 141.0
YYD2_k127_4319918_15 - - - - 0.00000000000000000000000000006089 129.0
YYD2_k127_4319918_16 - - - - 0.000000000000000000000004297 114.0
YYD2_k127_4319918_17 Plasmid stabilization system - - - 0.0000000000000000000123 94.0
YYD2_k127_4319918_18 - - - - 0.000000000000009766 79.0
YYD2_k127_4319918_19 metal-dependent phosphoesterases (PHP family) - - - 0.000000000008063 78.0
YYD2_k127_4319918_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05825 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 492.0
YYD2_k127_4319918_20 - - - - 0.000004882 55.0
YYD2_k127_4319918_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 461.0
YYD2_k127_4319918_4 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 419.0
YYD2_k127_4319918_5 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 342.0
YYD2_k127_4319918_6 (ABC) transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007478 327.0
YYD2_k127_4319918_7 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 309.0
YYD2_k127_4319918_8 HlyD family secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 314.0
YYD2_k127_4319918_9 HlyD family secretion protein K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 311.0
YYD2_k127_4328342_0 Catalyzes the formation of succinate from succinate semialdehyde K00135 GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004777,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006105,GO:0006520,GO:0006536,GO:0006538,GO:0006540,GO:0006807,GO:0008150,GO:0008152,GO:0009013,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009448,GO:0009450,GO:0009987,GO:0016054,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0019752,GO:0032787,GO:0036094,GO:0042133,GO:0042135,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.2.1.16,1.2.1.20,1.2.1.79 1.065e-245 766.0
YYD2_k127_4328342_1 proline dipeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 512.0
YYD2_k127_4328342_2 Catalytic domain of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004428 303.0
YYD2_k127_4328342_3 Protein of unknown function (DUF3237) - - - 0.000000000000000000000000000003258 138.0
YYD2_k127_4328342_4 Bacterial-like globin K06886 - - 0.00000000000000000000909 108.0
YYD2_k127_4335645_0 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009832 372.0
YYD2_k127_4341701_0 PQQ-like domain K17760 - 1.1.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 515.0
YYD2_k127_4341701_1 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K17763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 430.0
YYD2_k127_4341701_10 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000000002286 183.0
YYD2_k127_4341701_11 Phospholipid methyltransferase - - - 0.00000000000000000000000000000000000000000000001609 182.0
YYD2_k127_4341701_12 Histidine kinase-like ATPases K17752 - 2.7.11.1 0.0000000000000000000000000000000000000000000001914 173.0
YYD2_k127_4341701_13 PFAM metal-dependent phosphohydrolase HD sub domain - - - 0.000000000000000000000000000000000000000000009307 181.0
YYD2_k127_4341701_14 Stage II sporulation protein E K05518 - 3.1.3.3 0.00000000000000000000000000000000000000000002517 168.0
YYD2_k127_4341701_15 PFAM Sulfate transporter antisigma-factor antagonist STAS K17762 - - 0.00000000000000000000000000000000000000000002835 165.0
YYD2_k127_4341701_16 protein histidine kinase activity - - - 0.00000000000000000000000000000000004951 145.0
YYD2_k127_4341701_17 - K02172 - - 0.00000000000000000000000000000000006173 145.0
YYD2_k127_4341701_19 SnoaL-like domain - - - 0.00000000000000000000000002167 116.0
YYD2_k127_4341701_2 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009849 399.0
YYD2_k127_4341701_21 - - - - 0.0000005956 57.0
YYD2_k127_4341701_3 Glucose / Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 317.0
YYD2_k127_4341701_4 methyltransferase K03149,K15256 GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0042221,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 292.0
YYD2_k127_4341701_5 Histidine kinase-like ATPase domain K01338,K04757,K06379,K08282,K17752 - 2.7.11.1,3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000006233 227.0
YYD2_k127_4341701_6 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000003353 227.0
YYD2_k127_4341701_7 Two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.00000000000000000000000000000000000000000000000000000000006285 218.0
YYD2_k127_4341701_8 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000006322 196.0
YYD2_k127_4341701_9 Conserved hypothetical protein (DUF2461) - - - 0.00000000000000000000000000000000000000000000000001037 187.0
YYD2_k127_4345939_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008815 463.0
YYD2_k127_4345939_1 transcriptional regulator PadR family - - - 0.000000000000000000000000000000000000000000001214 168.0
YYD2_k127_4345939_2 RibD C-terminal domain - - - 0.0000006001 55.0
YYD2_k127_4353348_0 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 339.0
YYD2_k127_4353348_1 Putative ATP-binding cassette K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 326.0
YYD2_k127_4353348_2 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000002283 161.0
YYD2_k127_4353348_3 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000001094 130.0
YYD2_k127_4360433_0 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005922 512.0
YYD2_k127_4360433_1 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 419.0
YYD2_k127_4360433_10 -O-antigen - - - 0.00000000000000000000000000000000000008939 158.0
YYD2_k127_4360433_11 Polysaccharide biosynthesis/export protein K01991 - - 0.000000000000000000000000000000000001382 148.0
YYD2_k127_4360433_12 Chain length determinant protein - - - 0.000000000000000000000000000000009613 144.0
YYD2_k127_4360433_13 response regulator, receiver - - - 0.00000000000000000000000000004531 126.0
YYD2_k127_4360433_14 Capsular exopolysaccharide family K16554 - - 0.00000000005559 73.0
YYD2_k127_4360433_2 Glycosyl transferase WecB/TagA/CpsF family K05946 - 2.4.1.187 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007207 368.0
YYD2_k127_4360433_3 Glycosyltransferase, group 1 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 349.0
YYD2_k127_4360433_4 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 350.0
YYD2_k127_4360433_5 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 357.0
YYD2_k127_4360433_6 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000238 256.0
YYD2_k127_4360433_7 polysaccharide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000293 216.0
YYD2_k127_4360433_8 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000001584 188.0
YYD2_k127_4360433_9 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000001742 168.0
YYD2_k127_4374170_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 539.0
YYD2_k127_4374170_1 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000002656 179.0
YYD2_k127_4374170_2 bacterial OsmY and nodulation domain K04065 - - 0.0000000000003729 76.0
YYD2_k127_4374227_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 478.0
YYD2_k127_4374227_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004073 409.0
YYD2_k127_4374227_10 TIGRFAM Outer membrane assembly lipoprotein YfiO K05807 - - 0.00000000000000000000000000002234 127.0
YYD2_k127_4374227_11 Nif-specific regulatory protein K02584 - - 0.0000000000000000000000000002318 133.0
YYD2_k127_4374227_12 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000005619 113.0
YYD2_k127_4374227_13 LysM domain K01185,K02030,K04043 - 3.2.1.17 0.00000001146 65.0
YYD2_k127_4374227_14 - - - - 0.00007344 45.0
YYD2_k127_4374227_2 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 310.0
YYD2_k127_4374227_3 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 303.0
YYD2_k127_4374227_4 PFAM transferase hexapeptide repeat containing protein K00966 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009782 298.0
YYD2_k127_4374227_5 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000003184 258.0
YYD2_k127_4374227_6 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000001189 183.0
YYD2_k127_4374227_7 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.000000000000000000000000000000000000000001764 163.0
YYD2_k127_4374227_8 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000001789 156.0
YYD2_k127_4374227_9 thioesterase K07107 - - 0.0000000000000000000000000000000000362 141.0
YYD2_k127_4374674_0 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003366 257.0
YYD2_k127_4374674_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000001445 261.0
YYD2_k127_4374674_2 O-acyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000001923 244.0
YYD2_k127_4374674_3 bacterial OsmY and nodulation domain - - - 0.00000000000000000000000000000000000000000000000000000007811 203.0
YYD2_k127_4374674_4 Nitroreductase family - - - 0.00000000000000000000000000000000000000000001822 171.0
YYD2_k127_4374674_5 Belongs to the universal stress protein A family - - - 0.00000000000000000000000000002808 129.0
YYD2_k127_4374674_6 COG0589 Universal stress protein UspA and related K14055 - - 0.0000000000000000003366 94.0
YYD2_k127_4374674_7 Surface antigen - - - 0.00000000000000001327 96.0
YYD2_k127_4374674_8 - - - - 0.0000000004566 69.0
YYD2_k127_4375681_0 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009391 461.0
YYD2_k127_4375681_1 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 324.0
YYD2_k127_4377549_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 448.0
YYD2_k127_4377549_1 Peptidase M56, BlaR1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000042 414.0
YYD2_k127_4377549_2 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004355 289.0
YYD2_k127_4377549_3 response to abiotic stimulus K06867 - - 0.00000000000000000000000000000000000000000000000000000000000000003583 238.0
YYD2_k127_4377549_4 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000000000000001662 159.0
YYD2_k127_4377549_5 Domain of unknown function (DUF4382) - - - 0.0000000001882 69.0
YYD2_k127_4377549_6 response to abiotic stimulus K06867 - - 0.0000004628 62.0
YYD2_k127_4377549_7 - - - - 0.0006157 48.0
YYD2_k127_4381421_0 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000003888 194.0
YYD2_k127_4381421_1 repeat-containing protein - - - 0.000001486 59.0
YYD2_k127_4384479_0 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 0.0 1039.0
YYD2_k127_4384479_1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 407.0
YYD2_k127_4384479_2 PFAM carbohydrate kinase K00854 - 2.7.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009987 297.0
YYD2_k127_4384479_3 HAD-superfamily hydrolase, subfamily IIB - - - 0.00000000000000000000000000001003 128.0
YYD2_k127_4389794_0 electron transfer activity - - - 0.000000000000000000000000000000000006254 154.0
YYD2_k127_4389794_1 PFAM RNA-directed DNA polymerase (Reverse transcriptase) K00986,K15342 - 2.7.7.49 0.00000000000000000000000000007991 118.0
YYD2_k127_4389794_2 ADP binding - - - 0.000000000000000008119 89.0
YYD2_k127_4389794_3 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.000000000004861 68.0
YYD2_k127_4394125_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.299e-290 913.0
YYD2_k127_4394125_1 Domain of unknown function (DUF1998) K06877 - - 1.646e-290 912.0
YYD2_k127_4394125_10 Site-specific DNA-methyltransferase (Adenine-specific) K06223 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000006168 225.0
YYD2_k127_4394125_11 Exonuclease K07502 - - 0.00000000000000000000000000000000000000000000000000515 201.0
YYD2_k127_4394125_12 Nodulation protein S (NodS) - - - 0.00000000000000000000000000000000000000000003711 170.0
YYD2_k127_4394125_13 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.00000000000000000000000000000000000022 147.0
YYD2_k127_4394125_14 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000002356 127.0
YYD2_k127_4394125_15 manganese ion transmembrane transporter activity - - - 0.00000000000000000000000000001738 137.0
YYD2_k127_4394125_16 Binds the 23S rRNA K02909 - - 0.000000000000000000000000002716 114.0
YYD2_k127_4394125_17 - - - - 0.000000000000008303 78.0
YYD2_k127_4394125_18 2OG-Fe(II) oxygenase superfamily K07336,K07394 - - 0.00000000000004081 82.0
YYD2_k127_4394125_19 - - - - 0.000000000001609 71.0
YYD2_k127_4394125_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 4.952e-222 696.0
YYD2_k127_4394125_20 O-Antigen ligase - - - 0.0002214 54.0
YYD2_k127_4394125_3 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 550.0
YYD2_k127_4394125_4 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 464.0
YYD2_k127_4394125_5 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 375.0
YYD2_k127_4394125_6 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 342.0
YYD2_k127_4394125_7 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006429 301.0
YYD2_k127_4394125_8 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004222 262.0
YYD2_k127_4394125_9 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000001537 250.0
YYD2_k127_4400202_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 462.0
YYD2_k127_4400202_1 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 368.0
YYD2_k127_4400202_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000628 271.0
YYD2_k127_4400202_3 ATP-grasp domain K01499,K06913 - 3.5.4.27 0.000000000000000000000000000000000000000000000000000000000005142 223.0
YYD2_k127_4400202_4 SWI complex, BAF60b domains - - - 0.000000000000000000000000000000007399 132.0
YYD2_k127_4409834_0 Deoxyhypusine synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 393.0
YYD2_k127_4409834_1 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 403.0
YYD2_k127_4409834_10 - - - - 0.0000001367 62.0
YYD2_k127_4409834_2 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004974 292.0
YYD2_k127_4409834_3 Sigma-54 factor interaction domain-containing protein K02481,K07712,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002647 275.0
YYD2_k127_4409834_4 peptidase S8 and S53, subtilisin, kexin, sedolisin K17734 - - 0.0000000000000000000000000000000000000000000000000000000000000000001304 252.0
YYD2_k127_4409834_5 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.000000000000000000000000000000000000000000000000000000000000000003023 241.0
YYD2_k127_4409834_6 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000006821 186.0
YYD2_k127_4409834_7 COG0720 6-pyruvoyl-tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000002847 163.0
YYD2_k127_4409834_8 PFAM Haloacid dehalogenase domain protein hydrolase K01091 - 3.1.3.18 0.000000000000000000000000000000003161 137.0
YYD2_k127_4409834_9 - - - - 0.00000000000000005713 91.0
YYD2_k127_4415602_0 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 458.0
YYD2_k127_4415602_1 PFAM Ankyrin repeat K06867 - - 0.0000000000000000000000000000000001232 149.0
YYD2_k127_4415602_2 ECF sigma factor K03088 - - 0.0000000000001917 83.0
YYD2_k127_4415602_3 Tetratricopeptide repeat - - - 0.0000000295 67.0
YYD2_k127_4420740_0 Acetamidase/Formamidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 396.0
YYD2_k127_4420740_1 Major Facilitator Superfamily K08177 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008447 339.0
YYD2_k127_4420740_2 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000001149 246.0
YYD2_k127_4420740_3 Sulfite exporter TauE/SafE - - - 0.000000000000000000000000008014 113.0
YYD2_k127_4421089_0 Formylmethanofuran dehydrogenase subunit A K00200 - 1.2.7.12 6.229e-232 730.0
YYD2_k127_4421089_1 Molybdopterin oxidoreductase K00201 - 1.2.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 438.0
YYD2_k127_4421089_2 selenocysteine insertion sequence binding K03833 GO:0000049,GO:0000166,GO:0001514,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006412,GO:0006414,GO:0006417,GO:0006451,GO:0006518,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009069,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016259,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031326,GO:0032268,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034248,GO:0034641,GO:0034645,GO:0035368,GO:0035639,GO:0036094,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 441.0
YYD2_k127_4421089_3 converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007678 400.0
YYD2_k127_4421089_4 L-seryl-tRNASec selenium transferase activity K01042 GO:0003674,GO:0003824,GO:0004125,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0019752,GO:0019842,GO:0030170,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0090304,GO:0097056,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 402.0
YYD2_k127_4421089_5 Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT) K00672 GO:0003674,GO:0003824,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0015947,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0030270,GO:0043446,GO:0044237,GO:0044281,GO:0071704 2.3.1.101 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 361.0
YYD2_k127_4421089_6 formylmethanofuran dehydrogenase subunit C K00202 - 1.2.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005661 292.0
YYD2_k127_4421089_7 PFAM molydopterin dinucleotide-binding region K00203 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0048037,GO:0051536,GO:0051540,GO:0055114 1.2.7.12 0.000000000004355 72.0
YYD2_k127_4423946_0 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000003186 271.0
YYD2_k127_4423946_1 Pfam:Pyridox_oxidase K01768 - 4.6.1.1 0.00000000000000007607 81.0
YYD2_k127_4423946_2 pyridoxamine 5-phosphate - - - 0.0000000001215 68.0
YYD2_k127_442571_0 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 587.0
YYD2_k127_442571_1 ATP dependent DNA ligase C terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 514.0
YYD2_k127_442571_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 421.0
YYD2_k127_442571_3 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007242 364.0
YYD2_k127_442571_4 decarboxylase K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000000000000000002523 201.0
YYD2_k127_442571_5 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000001109 188.0
YYD2_k127_442571_6 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019222,GO:0019439,GO:0034353,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.000000000000000000000000000000000000000006767 159.0
YYD2_k127_442571_7 PFAM regulatory protein, MerR K22491 - - 0.000000000000000000000000000000000000507 153.0
YYD2_k127_442571_8 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000000007766 103.0
YYD2_k127_442571_9 Protein of unknown function VcgC/VcgE (DUF2780) - - - 0.00000000004282 72.0
YYD2_k127_4439569_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 601.0
YYD2_k127_4439569_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 449.0
YYD2_k127_4439569_10 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000004816 195.0
YYD2_k127_4439569_11 YCII-related domain - - - 0.000000000000000000000000000000000000000000131 164.0
YYD2_k127_4439569_12 PFAM Outer membrane efflux protein - - - 0.00000000000000000000000000000000000001671 163.0
YYD2_k127_4439569_13 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000001075 124.0
YYD2_k127_4439569_14 - - - - 0.000000000000006507 87.0
YYD2_k127_4439569_2 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 390.0
YYD2_k127_4439569_3 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000148 280.0
YYD2_k127_4439569_4 Protein of unknown function (DUF2400) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004166 254.0
YYD2_k127_4439569_5 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000003604 243.0
YYD2_k127_4439569_6 Belongs to the purine pyrimidine phosphoribosyltransferase family. PyrR subfamily K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000001834 232.0
YYD2_k127_4439569_7 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000002322 231.0
YYD2_k127_4439569_8 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000009008 210.0
YYD2_k127_4439569_9 PFAM Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000006766 205.0
YYD2_k127_4444045_0 methyltransferase - - - 0.00000000000000000000000000000000000000211 155.0
YYD2_k127_4444045_2 Trypsin-like peptidase domain - - - 0.000009829 58.0
YYD2_k127_4444045_3 Carboxypeptidase regulatory-like domain - - - 0.00001304 58.0
YYD2_k127_4456110_0 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000000000000001589 160.0
YYD2_k127_4456110_1 Histidine kinase - - - 0.0000000000000000000000000000001777 141.0
YYD2_k127_4456110_2 - - - - 0.0000000000000000000000000006116 115.0
YYD2_k127_4456110_3 DoxX-like family - - - 0.00000000000001259 78.0
YYD2_k127_4456110_4 serine-type endopeptidase activity - - - 0.0000003934 51.0
YYD2_k127_4457034_0 PQQ enzyme repeat K00114 - 1.1.2.8 3.424e-242 766.0
YYD2_k127_4457034_1 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006808 586.0
YYD2_k127_4457034_10 Carboxypeptidase regulatory-like domain - - - 0.00000006345 65.0
YYD2_k127_4457034_2 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007204 357.0
YYD2_k127_4457034_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006393 323.0
YYD2_k127_4457034_4 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000369 309.0
YYD2_k127_4457034_5 PFAM Cytochrome C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 299.0
YYD2_k127_4457034_6 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000002582 218.0
YYD2_k127_4457034_7 Protein of unknown function (DUF3810) - - - 0.0000000000000000000000000000000003006 145.0
YYD2_k127_4457034_8 peptidyl-tyrosine sulfation - - - 0.000000000000000000000001036 119.0
YYD2_k127_44575_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000003113 278.0
YYD2_k127_44575_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0001966 52.0
YYD2_k127_4460125_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005669 477.0
YYD2_k127_4461577_0 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007688 419.0
YYD2_k127_4461577_1 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005908 427.0
YYD2_k127_4461577_10 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000001382 153.0
YYD2_k127_4461577_11 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic - - - 0.0000005104 60.0
YYD2_k127_4461577_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 421.0
YYD2_k127_4461577_3 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 352.0
YYD2_k127_4461577_4 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008149 334.0
YYD2_k127_4461577_5 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001387 283.0
YYD2_k127_4461577_6 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002302 285.0
YYD2_k127_4461577_7 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000005292 265.0
YYD2_k127_4461577_8 Pfam Glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000007927 243.0
YYD2_k127_4461577_9 PFAM glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000009218 248.0
YYD2_k127_4465724_0 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007605 461.0
YYD2_k127_4465724_1 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004459 391.0
YYD2_k127_4465724_2 DNA topological change K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 345.0
YYD2_k127_4465724_3 response to abiotic stimulus K06867 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001996 276.0
YYD2_k127_4465724_4 Bacterial extracellular solute-binding protein K02020,K22003 - 5.3.3.7 0.000000000000000000000000000000000000002812 155.0
YYD2_k127_4467157_0 copper-translocating P-type ATPase K17686 - 3.6.3.54 0.0 1067.0
YYD2_k127_4467157_1 copper resistance - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 338.0
YYD2_k127_4523695_0 TonB-dependent Receptor Plug Domain - - - 1.145e-240 775.0
YYD2_k127_4523695_1 HAD-hyrolase-like K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007799 300.0
YYD2_k127_4523695_2 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000142 289.0
YYD2_k127_4523695_3 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001246 265.0
YYD2_k127_4523695_4 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002603 261.0
YYD2_k127_4523695_5 Histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000007242 258.0
YYD2_k127_4523695_6 tRNA rRNA methyltransferase SpoU - - - 0.0000000000000000000000000004696 119.0
YYD2_k127_4539201_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000004234 233.0
YYD2_k127_4539201_1 Histidine kinase K07683 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000005192 214.0
YYD2_k127_4539201_2 efflux transmembrane transporter activity - - - 0.000000000000000000000111 100.0
YYD2_k127_4539201_3 Tetratricopeptide repeat - - - 0.000007826 58.0
YYD2_k127_4539201_4 PFAM Tetratricopeptide repeat - - - 0.0001685 54.0
YYD2_k127_4540506_0 peptidyl-tyrosine sulfation K01277 - 3.4.14.4 7.442e-272 851.0
YYD2_k127_4540506_1 Dehydrogenase K00117,K19813 - 1.1.5.2,1.1.5.9 6.388e-213 681.0
YYD2_k127_4540506_10 beta-propeller repeat - - - 0.0000000000000000000000000000000001046 151.0
YYD2_k127_4540506_11 Protein of unknown function (DUF1761) - - - 0.00000000000000000000000000000003901 130.0
YYD2_k127_4540506_2 Putative glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009437 591.0
YYD2_k127_4540506_3 Protein of unknown function (DUF1624) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007761 339.0
YYD2_k127_4540506_4 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001382 258.0
YYD2_k127_4540506_5 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.0000000000000000000000000000000000000000000000000000002075 216.0
YYD2_k127_4540506_6 Peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000000000000000000000000006103 186.0
YYD2_k127_4540506_7 NIPSNAP - - - 0.000000000000000000000000000000000000000000267 165.0
YYD2_k127_4540506_8 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000000000000000000000000000000000000214 170.0
YYD2_k127_4540506_9 YCII-related domain K09780 - - 0.000000000000000000000000000000000006095 139.0
YYD2_k127_4541258_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006239 516.0
YYD2_k127_4541258_1 hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000005148 226.0
YYD2_k127_4541258_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.0000000000000000000004727 98.0
YYD2_k127_4560978_0 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006319 596.0
YYD2_k127_4560978_1 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008959 585.0
YYD2_k127_4560978_10 methyltransferase - - - 0.000000000000000000000000000000002211 137.0
YYD2_k127_4560978_11 - - - - 0.00000000000000000000000002359 121.0
YYD2_k127_4560978_12 MacB-like periplasmic core domain - - - 0.000006563 57.0
YYD2_k127_4560978_2 periplasmic solute binding protein K02077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 370.0
YYD2_k127_4560978_3 phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 381.0
YYD2_k127_4560978_4 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 317.0
YYD2_k127_4560978_5 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007573 322.0
YYD2_k127_4560978_6 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007887 257.0
YYD2_k127_4560978_7 Oxidoreductase molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007713 263.0
YYD2_k127_4560978_8 pfam abc-3 K09816 - - 0.0000000000000000000000000000000000000000000000000000000000000006523 235.0
YYD2_k127_4560978_9 (ABC) transporter - - - 0.00000000000000000000000000000000000000000000000000000000006996 210.0
YYD2_k127_4574570_0 short-chain alcohol - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 461.0
YYD2_k127_4574570_1 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 354.0
YYD2_k127_4574570_2 Gaf domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001652 285.0
YYD2_k127_4574570_3 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000000005047 190.0
YYD2_k127_4574570_4 Pyridoxamine 5'-phosphate oxidase K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000006868 188.0
YYD2_k127_4575802_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 2.585e-303 951.0
YYD2_k127_4575802_1 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 599.0
YYD2_k127_4575802_10 Lipopolysaccharide-assembly - - - 0.000000000000000000000004096 109.0
YYD2_k127_4575802_11 - - - - 0.000000000000002711 80.0
YYD2_k127_4575802_12 - - - - 0.0000000000003669 81.0
YYD2_k127_4575802_13 Ribosomal protein S20 K02968 - - 0.000000000002561 70.0
YYD2_k127_4575802_14 Domain of unknown function (DUF4440) - - - 0.00000000005743 69.0
YYD2_k127_4575802_15 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.000003374 59.0
YYD2_k127_4575802_16 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0000639 48.0
YYD2_k127_4575802_2 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004362 494.0
YYD2_k127_4575802_3 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007882 349.0
YYD2_k127_4575802_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003248 325.0
YYD2_k127_4575802_5 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 299.0
YYD2_k127_4575802_6 Histone deacetylase domain K04768 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 293.0
YYD2_k127_4575802_7 PepSY-associated TM region - - - 0.0000000000000000000000000000000000000000000000178 182.0
YYD2_k127_4575802_8 Protein of unknown function (DUF456) K09793 - - 0.000000000000000000000000000000000000000005013 159.0
YYD2_k127_4575802_9 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.0000000000000000000000000000000000000001092 159.0
YYD2_k127_4580962_0 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 333.0
YYD2_k127_4580962_1 Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) K08680 - 4.2.99.20 0.00000000000000000000000000000000000000000000000003354 192.0
YYD2_k127_4580962_2 nuclease activity - - - 0.0000000000000000000000000000000002459 135.0
YYD2_k127_4589040_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 397.0
YYD2_k127_4589040_1 Glucose sorbosone K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 302.0
YYD2_k127_4589040_2 - - - - 0.000000000000000000000000000000000000000000000003395 186.0
YYD2_k127_4589040_4 TonB-dependent receptor - - - 0.000000000000000000000000000000000001153 157.0
YYD2_k127_4589040_5 - - - - 0.0000000000000000000000000004068 124.0
YYD2_k127_4589040_6 - - - - 0.0000001878 61.0
YYD2_k127_4589169_0 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000002609 265.0
YYD2_k127_4589169_1 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000001214 241.0
YYD2_k127_4589169_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000008709 192.0
YYD2_k127_4592155_0 Amidohydrolase family - - - 1.119e-270 844.0
YYD2_k127_4592155_1 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007321 287.0
YYD2_k127_4592155_2 Cupin - - - 0.000000000000000000000000000000000000000000005372 169.0
YYD2_k127_4592155_3 Antibiotic biosynthesis monooxygenase K09932 - - 0.0000000000000000000000000000000000000002112 157.0
YYD2_k127_4592155_4 protein possibly involved in aromatic compounds catabolism - - - 0.0000000000000000000009356 103.0
YYD2_k127_4592155_5 BON domain K04065 - - 0.000000002302 60.0
YYD2_k127_4592155_6 DoxX K15977 - - 0.000004679 56.0
YYD2_k127_4595640_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001718 282.0
YYD2_k127_4595640_1 PIN domain - - - 0.0000000000000000000000001914 112.0
YYD2_k127_4595640_3 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.00000000002129 67.0
YYD2_k127_4595640_5 MacB-like periplasmic core domain - - - 0.0000004916 57.0
YYD2_k127_4595640_6 SnoaL-like domain - - - 0.000008183 49.0
YYD2_k127_4597243_0 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 434.0
YYD2_k127_4597243_1 Cytochrome C biogenesis protein transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 417.0
YYD2_k127_4597243_2 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000004771 224.0
YYD2_k127_4597243_3 - - - - 0.000000000000000000000000000000000000001588 153.0
YYD2_k127_4597243_4 - - - - 0.0000000000000000000000000001346 115.0
YYD2_k127_4604971_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 1.679e-299 934.0
YYD2_k127_4604971_1 Glycogen debranching enzyme N terminal - - - 1.598e-232 738.0
YYD2_k127_4604971_10 Nad-dependent epimerase dehydratase - - - 0.00000000933 64.0
YYD2_k127_4604971_11 Evidence 4 Homologs of previously reported genes of - - - 0.0001723 54.0
YYD2_k127_4604971_2 synthase K06044 - 5.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 592.0
YYD2_k127_4604971_3 1,4-alpha-glucan branching enzyme activity K01236 - 3.2.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 561.0
YYD2_k127_4604971_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006074 275.0
YYD2_k127_4604971_5 - - - - 0.000000000000000000000000000000000000000000000000000000000001321 231.0
YYD2_k127_4604971_6 ubiE/COQ5 methyltransferase family K00570 - 2.1.1.17,2.1.1.71 0.000000000000000000000000000000000000000000000000000001472 199.0
YYD2_k127_4604971_7 Lipocalin-like domain K03098 - - 0.0000000000000000000000000000000000000000000008313 174.0
YYD2_k127_4604971_8 epimerase K07071 - - 0.000000000000000000000000003972 118.0
YYD2_k127_4604971_9 HEAT repeat - - - 0.00000000000000016 90.0
YYD2_k127_4611582_0 Putative zinc-binding metallo-peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 387.0
YYD2_k127_4611582_1 Circularly permuted ATP-grasp type 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 352.0
YYD2_k127_4613086_0 NPCBM/NEW2 domain K07407 - 3.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 611.0
YYD2_k127_4613086_1 Belongs to the universal stress protein A family - - - 0.000000000000000000000000002314 123.0
YYD2_k127_4613086_2 Universal stress protein family - - - 0.00000000000000000000001465 109.0
YYD2_k127_4613086_3 Methyltransferase domain - - - 0.00001525 53.0
YYD2_k127_4613086_4 Methyltransferase domain - - - 0.00001773 54.0
YYD2_k127_4613086_5 Protein kinase domain K12132 - 2.7.11.1 0.00007549 48.0
YYD2_k127_4613086_6 Beta-lactamase superfamily domain - - - 0.0006341 44.0
YYD2_k127_4619634_0 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000003146 244.0
YYD2_k127_4619634_1 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000004729 189.0
YYD2_k127_4619634_2 von Willebrand factor, type A - - - 0.0000000000007391 79.0
YYD2_k127_4619634_3 Iron-sulfur cluster-binding domain - - - 0.0003572 53.0
YYD2_k127_4624328_0 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002297 253.0
YYD2_k127_4624328_1 Homeodomain-like domain - - - 0.00000000000000000000000000000002802 128.0
YYD2_k127_4637117_0 tRNA (Guanine-1)-methyltransferase K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000578 250.0
YYD2_k127_4637117_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000005076 188.0
YYD2_k127_4637117_2 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000006671 142.0
YYD2_k127_4637117_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788,K10810 - 2.5.1.3,5.3.99.10 0.0000000000000000000000000000009344 132.0
YYD2_k127_4637117_4 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000007793 105.0
YYD2_k127_4637117_5 - - - - 0.000000000000000000000177 108.0
YYD2_k127_4637117_6 - - - - 0.0000000004379 64.0
YYD2_k127_4637117_7 PFAM Prolyl oligopeptidase family - - - 0.00003463 54.0
YYD2_k127_4637117_8 Protein of unknown function (DUF2442) - - - 0.0001944 45.0
YYD2_k127_463783_0 FtsX-like permease family - - - 5.617e-315 996.0
YYD2_k127_463783_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 526.0
YYD2_k127_463783_2 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000000000000000000002069 175.0
YYD2_k127_463783_3 - - - - 0.0000000000005186 74.0
YYD2_k127_4643393_0 Proton-conducting membrane transporter K00342,K05575 - 1.6.5.3 6.554e-200 637.0
YYD2_k127_4643393_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343,K05573 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007367 348.0
YYD2_k127_4643393_2 NADH-quinone oxidoreductase chain L K00341,K05577 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000001845 111.0
YYD2_k127_4663864_0 short-chain dehydrogenase - - - 0.000000000000000000000000000000000000135 143.0
YYD2_k127_4663864_1 Alpha/beta hydrolase family - - - 0.00000000000000000000000003023 118.0
YYD2_k127_4663864_2 - - - - 0.0000000000000001467 84.0
YYD2_k127_4663864_3 O-methyltransferase - - - 0.00002191 47.0
YYD2_k127_4663864_4 adenosylhomocysteine nucleosidase activity K01239,K01243,K03716 - 3.2.2.1,3.2.2.9,4.1.99.14 0.0001924 46.0
YYD2_k127_4683214_0 Transposase domain (DUF772) K07487 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 494.0
YYD2_k127_4683214_2 glyoxalase III activity - - - 0.0003244 48.0
YYD2_k127_4685845_0 Amidohydrolase K10221 - 3.1.1.57 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 551.0
YYD2_k127_4685845_1 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000968 431.0
YYD2_k127_4685845_2 Oxidoreductase family, NAD-binding Rossmann fold K10219 - 1.1.1.312 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008054 317.0
YYD2_k127_4685845_3 Catalyzes the non-heme iron(II)-dependent oxidative cleavage of 2,3-dihydroxyphenylpropionic acid and 2,3- dihydroxicinnamic acid into 2-hydroxy-6-ketononadienedioate and 2- hydroxy-6-ketononatrienedioate, respectively K04099,K04101 - 1.13.11.57,1.13.11.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 317.0
YYD2_k127_4685845_4 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006376 310.0
YYD2_k127_4685845_5 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005374 300.0
YYD2_k127_4685845_6 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003456 295.0
YYD2_k127_4685845_7 Ndr family K01055 - 3.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000008169 237.0
YYD2_k127_4685845_8 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000002265 196.0
YYD2_k127_4685845_9 Domain of unknown function (DUF4399) - - - 0.0000000000000000000614 96.0
YYD2_k127_4693965_0 - - - - 0.0000000000000003228 93.0
YYD2_k127_4693965_1 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000001088 71.0
YYD2_k127_4693965_2 - - - - 0.00000002091 64.0
YYD2_k127_4693965_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0006697 45.0
YYD2_k127_4694844_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009856 356.0
YYD2_k127_4694844_1 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004432 294.0
YYD2_k127_4694844_2 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000001009 232.0
YYD2_k127_4694844_3 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.0000000000000000000000000000000000000000000000000001534 196.0
YYD2_k127_4694844_4 PFAM Dienelactone hydrolase K01061 - 3.1.1.45 0.00000000000000000000001057 111.0
YYD2_k127_4694844_5 - - - - 0.00000000000000001369 85.0
YYD2_k127_4694844_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000004287 83.0
YYD2_k127_4694844_7 PFAM Major Facilitator Superfamily K08223 - - 0.00000000238 63.0
YYD2_k127_4694844_8 - - - - 0.0000001414 62.0
YYD2_k127_4709491_0 Glycosyl transferase family 21 - - - 5.171e-198 628.0
YYD2_k127_4709491_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 407.0
YYD2_k127_4709491_2 (AIR) carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009122 288.0
YYD2_k127_4709491_3 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.000000000000000000000000000000000000000000000000000000000000000002479 240.0
YYD2_k127_4709491_4 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K02479 - - 0.0000000000000000000000000000000000000000000000000000000000001287 220.0
YYD2_k127_4709491_5 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000005437 227.0
YYD2_k127_4709491_6 SnoaL-like domain - - - 0.000008485 55.0
YYD2_k127_4709491_7 - - - - 0.00001482 56.0
YYD2_k127_4709970_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 4.38e-321 1003.0
YYD2_k127_4709970_1 C-terminus of AA_permease K03294 - - 1.129e-233 731.0
YYD2_k127_4712174_0 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 493.0
YYD2_k127_4712174_1 Phospholipase D Transphosphatidylase K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000324 378.0
YYD2_k127_4712174_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007669 280.0
YYD2_k127_4712174_3 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005328 274.0
YYD2_k127_4712174_4 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000000000000000000000000005617 138.0
YYD2_k127_4725017_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001733 267.0
YYD2_k127_4764043_0 DEAD/H associated K03724 - - 0.0 1448.0
YYD2_k127_4764043_1 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 574.0
YYD2_k127_4764043_2 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009214 515.0
YYD2_k127_4764043_3 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 410.0
YYD2_k127_4764043_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000009354 249.0
YYD2_k127_4764043_5 - - - - 0.000000000000000000000000000000000000000000531 171.0
YYD2_k127_4764043_6 Polysaccharide deacetylase K22278 - 3.5.1.104 0.00000000000000000000000000003227 126.0
YYD2_k127_4764043_7 - - - - 0.0000000000000000000000000003436 124.0
YYD2_k127_4764043_8 Belongs to the ompA family - - - 0.0001563 52.0
YYD2_k127_4765886_0 PQQ-like domain K05889 - 1.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 616.0
YYD2_k127_4765886_1 Amidinotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006206 304.0
YYD2_k127_4765886_2 GMC oxidoreductase K06151 - 1.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006814 284.0
YYD2_k127_4765886_3 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003617 263.0
YYD2_k127_4765886_4 ABC-2 family transporter protein - - - 0.000000000000000000000000001113 126.0
YYD2_k127_4765886_5 Gluconate 2-dehydrogenase subunit 3 K06152 - 1.1.99.3 0.0000000000000000000001906 106.0
YYD2_k127_4765886_6 Cupin 2, conserved barrel - - - 0.000000000004609 66.0
YYD2_k127_4775068_0 His Kinase A (phosphoacceptor) domain - - - 0.0 1135.0
YYD2_k127_4775068_1 Multicopper oxidase - - - 9.213e-214 679.0
YYD2_k127_4775068_2 Peptidase dimerisation domain K13049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008884 491.0
YYD2_k127_4775068_3 COGs COG5616 integral membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003129 277.0
YYD2_k127_4775068_4 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.000000000000000027 89.0
YYD2_k127_4775068_5 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.0000000000657 63.0
YYD2_k127_4777492_0 Protein kinase domain K12132 - 2.7.11.1 2.257e-225 727.0
YYD2_k127_4777492_1 DNA topological change - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009565 439.0
YYD2_k127_4782557_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 3.456e-232 740.0
YYD2_k127_4782557_1 cellulose binding - - - 3.614e-229 712.0
YYD2_k127_4782557_10 - - - - 0.000000000000000000000000000000000000000003923 160.0
YYD2_k127_4782557_11 Transcriptional regulator K07978,K07979 - - 0.000000000000000000000000000000000001091 142.0
YYD2_k127_4782557_12 - - - - 0.000000000000000000000000000000000008543 149.0
YYD2_k127_4782557_13 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000002536 145.0
YYD2_k127_4782557_14 - - - - 0.000000000000000000000000003267 124.0
YYD2_k127_4782557_15 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000002611 110.0
YYD2_k127_4782557_16 - - - - 0.000000000000000000000002456 115.0
YYD2_k127_4782557_17 PFAM PEGA domain - - - 0.0000000000000000001209 104.0
YYD2_k127_4782557_18 thiolester hydrolase activity K01259,K06889,K12269 - 3.4.11.5 0.00000000000179 76.0
YYD2_k127_4782557_19 STAS domain - - - 0.00000000493 62.0
YYD2_k127_4782557_2 Acetyl-coenzyme A transporter 1 K08218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 571.0
YYD2_k127_4782557_20 - K01992 - - 0.00000006332 63.0
YYD2_k127_4782557_21 PFAM von Willebrand factor type A domain - - - 0.000286 52.0
YYD2_k127_4782557_22 Methionine biosynthesis protein MetW K00568 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016020,GO:0016740,GO:0016741,GO:0032259,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 2.1.1.222,2.1.1.64 0.0004103 53.0
YYD2_k127_4782557_23 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000703 51.0
YYD2_k127_4782557_3 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005086 445.0
YYD2_k127_4782557_4 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002632 283.0
YYD2_k127_4782557_5 Aldolase/RraA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001241 248.0
YYD2_k127_4782557_6 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003147 243.0
YYD2_k127_4782557_7 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000005184 202.0
YYD2_k127_4782557_8 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.000000000000000000000000000000000000000000000001073 178.0
YYD2_k127_4782557_9 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.0000000000000000000000000000000000000000001144 161.0
YYD2_k127_4813644_0 methyltransferase - - - 0.000000000000000000000002608 104.0
YYD2_k127_4824066_0 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 387.0
YYD2_k127_4824066_1 ROK family K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 376.0
YYD2_k127_4824066_2 translation initiation factor activity K07004,K20276 - - 0.00000009978 63.0
YYD2_k127_4825821_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 5.519e-197 644.0
YYD2_k127_4825821_1 Belongs to the 'phage' integrase family - - - 0.0003507 45.0
YYD2_k127_4853941_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 524.0
YYD2_k127_4853941_1 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000002704 128.0
YYD2_k127_4853941_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000415 70.0
YYD2_k127_4860384_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004747 434.0
YYD2_k127_4860384_1 - - - - 0.0000000000000000000003049 105.0
YYD2_k127_4860384_2 phosphoprotein phosphatase activity K14680 - 6.5.1.3 0.0000000000000001068 89.0
YYD2_k127_4876960_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 421.0
YYD2_k127_4876960_1 Tryptophanyl-tRNA synthetase K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005902 357.0
YYD2_k127_4876960_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000003003 209.0
YYD2_k127_4876960_3 Peptidase family M50 K06402 - - 0.0000000000000000000000000000000000000000000000001478 183.0
YYD2_k127_4876960_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000002266 64.0
YYD2_k127_4880384_0 PQQ-like domain K00114 - 1.1.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005132 533.0
YYD2_k127_4880384_1 response regulator K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 348.0
YYD2_k127_4880384_10 PFAM TPR repeat-containing protein - - - 0.000001034 60.0
YYD2_k127_4880384_2 carbamoyl transferase, NodU family K00612,K16035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000089 362.0
YYD2_k127_4880384_3 Histidine kinase K13598 - 2.7.13.3 0.0000000000000000000000000000000000004979 158.0
YYD2_k127_4880384_4 Zinc metalloprotease (Elastase) K01400,K08605,K08777 - 3.4.24.28,3.4.24.30 0.0000000000000000000000000000000002859 151.0
YYD2_k127_4880384_5 PAP2 superfamily - - - 0.0000000000000000000000000000008923 132.0
YYD2_k127_4880384_6 PQQ-like domain K00114 - 1.1.2.8 0.000000000000000000000001154 106.0
YYD2_k127_4880384_7 peptidyl-tyrosine sulfation - - - 0.00000000000000000003194 100.0
YYD2_k127_4880384_8 - - - - 0.000000000000000003006 91.0
YYD2_k127_4880384_9 UDP-N-acetylglucosamine 2-epimerase activity - - - 0.0000001424 64.0
YYD2_k127_4880845_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000928 599.0
YYD2_k127_4880845_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 394.0
YYD2_k127_4880845_10 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000000000000000000001293 191.0
YYD2_k127_4880845_11 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000008258 193.0
YYD2_k127_4880845_12 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000000000005641 170.0
YYD2_k127_4880845_13 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000002731 168.0
YYD2_k127_4880845_14 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000000000000000000000000000000000000006069 152.0
YYD2_k127_4880845_15 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000001051 147.0
YYD2_k127_4880845_16 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000004204 109.0
YYD2_k127_4880845_17 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000007303 105.0
YYD2_k127_4880845_18 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000000000004846 102.0
YYD2_k127_4880845_19 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000253 93.0
YYD2_k127_4880845_2 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 317.0
YYD2_k127_4880845_20 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000009109 93.0
YYD2_k127_4880845_21 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000002331 81.0
YYD2_k127_4880845_22 Ribosomal protein L30p/L7e K02907 - - 0.000000000006454 74.0
YYD2_k127_4880845_23 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.0000000086 61.0
YYD2_k127_4880845_3 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002647 270.0
YYD2_k127_4880845_4 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006772 267.0
YYD2_k127_4880845_5 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000000000000381 228.0
YYD2_k127_4880845_6 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000001233 216.0
YYD2_k127_4880845_7 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000004838 200.0
YYD2_k127_4880845_8 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000002184 192.0
YYD2_k127_4880845_9 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.00000000000000000000000000000000000000000000000000001172 204.0
YYD2_k127_4882129_0 Oligopeptidase F K08602 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 527.0
YYD2_k127_4882129_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004353 278.0
YYD2_k127_4882129_2 - - - - 0.000000000000000000000000000000000000000000000000002466 195.0
YYD2_k127_4885568_0 efflux transmembrane transporter activity - - - 1.067e-229 730.0
YYD2_k127_4885568_1 Glucose / Sorbosone dehydrogenase K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006306 322.0
YYD2_k127_4885568_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000001762 204.0
YYD2_k127_4885568_3 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000000000001808 150.0
YYD2_k127_4885568_5 - - - - 0.0000004135 56.0
YYD2_k127_4885568_6 - - - - 0.0000005456 59.0
YYD2_k127_4885568_7 - - - - 0.0003777 51.0
YYD2_k127_4889734_0 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000006722 191.0
YYD2_k127_4889734_1 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.0000000000000000001041 90.0
YYD2_k127_4898557_0 efflux transmembrane transporter activity - - - 8.612e-308 963.0
YYD2_k127_4898557_1 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 523.0
YYD2_k127_4898557_2 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 479.0
YYD2_k127_4898557_3 Conserved domain frequently associated with peptide methionine sulfoxide reductase K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000006059 216.0
YYD2_k127_4898557_4 Protein of unknown function DUF45 - - - 0.00000000000000000000000000000000008703 148.0
YYD2_k127_4901072_0 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001241 286.0
YYD2_k127_4901072_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000003299 252.0
YYD2_k127_4901072_10 Lamin Tail Domain K07004 - - 0.000000003927 68.0
YYD2_k127_4901072_11 peptidyl-tyrosine sulfation - - - 0.000002983 57.0
YYD2_k127_4901072_2 Polysaccharide lyase family 4, domain II - - - 0.00000000000000000000000000000000000000000000000000000000002429 214.0
YYD2_k127_4901072_3 Cytochrome oxidase assembly protein K02259 - - 0.000000000000000000000000000000000000000000000000006526 196.0
YYD2_k127_4901072_4 arylsulfatase A - - - 0.00000000000000000000000000000000000000000000000001119 203.0
YYD2_k127_4901072_5 Lamin Tail Domain - - - 0.000000000000000000000000000000000000000000000001968 186.0
YYD2_k127_4901072_6 Protein of unknown function (DUF420) - - - 0.000000000000000000000000000000000002691 141.0
YYD2_k127_4901072_7 Diguanylate cyclase - - - 0.00000000000000000000000007088 123.0
YYD2_k127_4901072_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.00000000000000000000000008331 113.0
YYD2_k127_4901072_9 Psort location CytoplasmicMembrane, score 10.00 - - - 0.000000001654 69.0
YYD2_k127_4909432_0 Belongs to the peptidase S8 family - - - 5.129e-278 880.0
YYD2_k127_4909432_1 ABC transporter C-terminal domain K15738 - - 1.35e-202 647.0
YYD2_k127_4909432_2 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 422.0
YYD2_k127_4909432_3 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 377.0
YYD2_k127_4909432_4 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000001335 213.0
YYD2_k127_4909432_6 oxidoreductase activity - - - 0.00001511 59.0
YYD2_k127_4914706_0 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 382.0
YYD2_k127_4914706_1 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005315 293.0
YYD2_k127_4914706_2 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008085 289.0
YYD2_k127_4914706_3 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003056 288.0
YYD2_k127_4914706_4 - K02172 - - 0.0000000000000000000000000000001683 136.0
YYD2_k127_4914706_5 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000004329 128.0
YYD2_k127_4914706_6 Carboxypeptidase regulatory-like domain - - - 0.00001781 51.0
YYD2_k127_4918005_0 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005373 274.0
YYD2_k127_4918005_1 - - - - 0.000000000000000000000000342 108.0
YYD2_k127_4918005_2 - - - - 0.00000000000000000000002155 112.0
YYD2_k127_4918090_0 - - - - 0.0000000000000000000000000000000002065 142.0
YYD2_k127_4918090_1 - - - - 0.00000000000000000000000006903 123.0
YYD2_k127_4937295_0 Aminotransferase class I and II K09758 - 4.1.1.12 1.382e-251 786.0
YYD2_k127_4937295_1 potassium ion transport K07085 - - 1.331e-194 617.0
YYD2_k127_4937295_2 Predicted Permease Membrane Region K07085 - - 0.000000101 54.0
YYD2_k127_4937402_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.381e-226 709.0
YYD2_k127_4937402_1 ATPases associated with a variety of cellular activities K01990,K09689,K09691,K09693 - 3.6.3.38,3.6.3.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 438.0
YYD2_k127_4937402_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006366 407.0
YYD2_k127_4937402_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009957 278.0
YYD2_k127_4937402_4 ABC-2 type transporter K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000765 258.0
YYD2_k127_4937402_5 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000000000009306 176.0
YYD2_k127_4937402_6 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000003123 127.0
YYD2_k127_4937664_0 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004731 495.0
YYD2_k127_4937664_1 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 443.0
YYD2_k127_494285_0 Flavin containing amine oxidoreductase - - - 8.028e-285 885.0
YYD2_k127_494285_1 metallopeptidase activity K03568 - - 3.592e-215 680.0
YYD2_k127_494285_2 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 505.0
YYD2_k127_494285_3 TIGRFAM phytoene desaturase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 453.0
YYD2_k127_494285_4 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000008273 158.0
YYD2_k127_494285_5 domain protein K14194 - - 0.000000000000000000000000000000000006137 153.0
YYD2_k127_494285_6 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000001333 135.0
YYD2_k127_494432_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 9.871e-253 807.0
YYD2_k127_494432_1 Belongs to the metal hydrolase YfiT family - - - 0.00000000000000000000000000000000000000000000000000000000001076 212.0
YYD2_k127_494432_2 domain protein K14194 - - 0.00000000000000000000000000000000000000000000000000005901 208.0
YYD2_k127_494432_3 BMC - - - 0.000000000000000000000000000002044 124.0
YYD2_k127_494432_4 - - - - 0.000000000000000000000000002442 119.0
YYD2_k127_494432_5 - - - - 0.0000000000000000001703 99.0
YYD2_k127_494432_6 domain protein - - - 0.000000000000001855 91.0
YYD2_k127_494432_8 Ferric reductase like transmembrane component - - - 0.00001788 55.0
YYD2_k127_4948049_0 COG0187 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02470,K02622 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 551.0
YYD2_k127_4948049_1 arylsulfatase activity K01132 - 3.1.6.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004109 543.0
YYD2_k127_4948049_10 SnoaL-like polyketide cyclase - - - 0.00005568 52.0
YYD2_k127_4948049_2 Dehydrogenase K00114 - 1.1.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007328 473.0
YYD2_k127_4948049_3 NYN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 302.0
YYD2_k127_4948049_4 RIO1 family K01090,K12132 - 2.7.11.1,3.1.3.16 0.000000000000000000000000000000000000000000000000000007431 208.0
YYD2_k127_4948049_5 PFAM Stage II sporulation E family protein K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000004986 170.0
YYD2_k127_4948049_6 peptidoglycan binding K03642 - - 0.0000000000000000000000000000001274 130.0
YYD2_k127_4948049_7 PQQ-like domain K00114 - 1.1.2.8 0.000000000000000000000000000000771 126.0
YYD2_k127_4948049_8 Cytochrome c - - - 0.0000000000000000000000000002719 118.0
YYD2_k127_4948049_9 - - - - 0.00000000000004053 77.0
YYD2_k127_4957379_0 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000001773 192.0
YYD2_k127_4957379_1 Protein of unknown function (DUF3179) - - - 0.0000000000000000000000000000000000000003698 167.0
YYD2_k127_4957379_2 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000115 117.0
YYD2_k127_4957379_3 Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors K12973 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009279,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016409,GO:0016416,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044462,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.251 0.000000000000000000000000005396 119.0
YYD2_k127_4957379_4 - - - - 0.00000000000000003559 96.0
YYD2_k127_4957379_5 Cupin - - - 0.0000000000000008338 83.0
YYD2_k127_4957379_6 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.000000000000005922 79.0
YYD2_k127_4957379_7 Cupin domain - - - 0.000000000001031 79.0
YYD2_k127_4957379_8 - - - - 0.00003435 52.0
YYD2_k127_4957379_9 Metallo-beta-lactamase superfamily - - - 0.00004431 56.0
YYD2_k127_4958290_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006849 331.0
YYD2_k127_4958290_1 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001278 267.0
YYD2_k127_4958290_2 xylan catabolic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000002668 243.0
YYD2_k127_4958290_3 phospholipase Carboxylesterase - - - 0.000000001529 66.0
YYD2_k127_4978877_0 - - - - 0.000000000000000000000000000000000000003047 159.0
YYD2_k127_4978877_1 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000000000000000000000007576 120.0
YYD2_k127_4978877_2 Protein of unknown function (DUF1761) - - - 0.00000000000009192 74.0
YYD2_k127_4978877_4 Carboxypeptidase regulatory-like domain - - - 0.0000228 55.0
YYD2_k127_4986214_0 Belongs to the ALAD family K01698 GO:0000287,GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0030312,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005726 437.0
YYD2_k127_4986214_1 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 424.0
YYD2_k127_4986214_10 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.0007219 46.0
YYD2_k127_4986214_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 359.0
YYD2_k127_4986214_3 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000007968 259.0
YYD2_k127_4986214_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000005549 250.0
YYD2_k127_4986214_5 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000003813 186.0
YYD2_k127_4986214_6 PFAM von Willebrand factor type A - - - 0.00000000000000000000000000000000000000000003116 174.0
YYD2_k127_4986214_7 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000987 144.0
YYD2_k127_4986214_8 von Willebrand factor, type A K12511 - - 0.00000000004841 74.0
YYD2_k127_4986214_9 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000009797 64.0
YYD2_k127_4990474_0 PepSY-associated TM region - - - 0.0000000000000000000000000000000000000000000000000000000000000000002546 244.0
YYD2_k127_4990474_1 TonB dependent receptor K02014,K16092 - - 0.000000000000000000000000000000000000000000000000000000000001193 236.0
YYD2_k127_4990474_2 Peptidase MA superfamily - - - 0.0000000000000000000000000000000000000702 155.0
YYD2_k127_5007492_0 Glyoxalase-like domain - - - 0.00000000000000000000000000000000000000000000000000000001205 200.0
YYD2_k127_5007492_1 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000002838 197.0
YYD2_k127_5007492_2 SMP-30/Gluconolaconase/LRE-like region - - - 0.000000000000000000000000000000000000003298 160.0
YYD2_k127_5007492_3 TonB-dependent receptor - - - 0.00000000000000000000000007942 121.0
YYD2_k127_5007492_4 von Willebrand factor, type A - - - 0.00000000000000000003994 102.0
YYD2_k127_5007492_5 transport - - - 0.00000000001579 77.0
YYD2_k127_5007492_6 MacB-like periplasmic core domain - - - 0.00000000002552 70.0
YYD2_k127_5011437_0 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000002603 184.0
YYD2_k127_5011437_1 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000074 176.0
YYD2_k127_5011437_2 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000000000000000000000000001077 138.0
YYD2_k127_5011437_3 - - - - 0.0000000000000000000004654 109.0
YYD2_k127_5011437_4 PFAM regulatory protein, LysR K14657 - - 0.00000000000000000163 88.0
YYD2_k127_5011437_5 - - - - 0.00000302 56.0
YYD2_k127_50124_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005571 384.0
YYD2_k127_5095078_0 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 451.0
YYD2_k127_5095078_1 DNA-templated transcription, initiation - - - 0.00000000000003007 74.0
YYD2_k127_5102745_0 carbamoyl transferase K00612 - - 0.000000000000000000000000003314 115.0
YYD2_k127_5102745_1 - - - - 0.0000000000000006281 90.0
YYD2_k127_5102745_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000228 54.0
YYD2_k127_5102789_0 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K03520 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005165 529.0
YYD2_k127_5102789_1 Belongs to the alpha-IPM synthase homocitrate synthase family - - - 0.000000000000000000000000000000000000000000000000000001484 196.0
YYD2_k127_5104760_0 regulation of response to stimulus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007167 419.0
YYD2_k127_5104760_1 Maltose acetyltransferase K00661 - 2.3.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 314.0
YYD2_k127_5104760_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000699 132.0
YYD2_k127_5104760_3 serine-type peptidase activity K01990,K08884,K12132,K18912 - 1.14.99.50,2.7.11.1 0.0000000000000000000000000005092 116.0
YYD2_k127_5104760_4 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) - - - 0.00000000002398 64.0
YYD2_k127_5104760_5 alpha/beta hydrolase fold - - - 0.00000000008455 73.0
YYD2_k127_5104760_6 DinB family - - - 0.000000000414 61.0
YYD2_k127_5108009_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 2.913e-200 653.0
YYD2_k127_5108009_1 DUF167 K09131 - - 0.0000000000002749 73.0
YYD2_k127_5108970_0 DNA topological change K03168 - 5.99.1.2 1.182e-228 736.0
YYD2_k127_5108970_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 462.0
YYD2_k127_5108970_2 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005262 402.0
YYD2_k127_5108970_3 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007914 383.0
YYD2_k127_5108970_4 ABC transporter, ATP-binding protein K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007453 299.0
YYD2_k127_5108970_5 Biotin-lipoyl like K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002964 293.0
YYD2_k127_5108970_6 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002612 274.0
YYD2_k127_5108970_7 Putative FMN-binding domain K07734 - - 0.000000000000000000000000000000000000000000000000000000000000000000000358 246.0
YYD2_k127_5108970_8 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549,K22363 - 2.1.1.14,4.4.1.23 0.00000000000000000000000000000000000000001896 167.0
YYD2_k127_5131493_0 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15061 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004059 291.0
YYD2_k127_5131493_1 Aldolase/RraA - - - 0.000000000000000000000000000000000000000000000000000000000000000000005422 240.0
YYD2_k127_5131493_2 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000008131 179.0
YYD2_k127_5131493_3 Aldolase/RraA - - - 0.0000000000000000000000000000000006096 132.0
YYD2_k127_5134988_0 xanthine dehydrogenase activity - - - 0.0 1130.0
YYD2_k127_5134988_1 PAP2 superfamily - - - 1.198e-206 654.0
YYD2_k127_5134988_10 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.00000000000000000000000000000000001028 147.0
YYD2_k127_5134988_11 S-adenosylmethionine decarboxylase K01611 - 4.1.1.50 0.00000000000000000000000000000008477 128.0
YYD2_k127_5134988_12 Domain of Unknown Function (DUF350) - - - 0.00000000000001498 77.0
YYD2_k127_5134988_13 - - - - 0.0000000000000326 74.0
YYD2_k127_5134988_2 Spermine/spermidine synthase domain K00797 - 2.5.1.16 1.244e-206 653.0
YYD2_k127_5134988_3 NAD(P)-binding Rossmann-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007818 472.0
YYD2_k127_5134988_4 Domain of unknown function (DUF4178) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006982 422.0
YYD2_k127_5134988_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005848 284.0
YYD2_k127_5134988_6 DinB family - - - 0.00000000000000000000000000000000000000000000000000000000000008623 216.0
YYD2_k127_5134988_7 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS CutS homologs K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000007237 197.0
YYD2_k127_5134988_8 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000000000000000003513 188.0
YYD2_k127_5134988_9 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000009378 161.0
YYD2_k127_5140117_0 aconitate hydratase K01681 - 4.2.1.3 0.0 1175.0
YYD2_k127_5140117_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 GO:0008150,GO:0040007 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 578.0
YYD2_k127_5140117_10 S1 P1 Nuclease - - - 0.00000000000000000000000000000000000009322 156.0
YYD2_k127_5140117_11 PFAM Integral membrane protein TerC K05794 - - 0.000000000000000005993 87.0
YYD2_k127_5140117_12 - - - - 0.00000000000005355 79.0
YYD2_k127_5140117_13 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000005641 72.0
YYD2_k127_5140117_14 23S rRNA-intervening sequence protein - - - 0.0000000006782 65.0
YYD2_k127_5140117_15 Zinc-dependent metalloprotease - - - 0.00000002886 65.0
YYD2_k127_5140117_2 Belongs to the peptidase M16 family K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 334.0
YYD2_k127_5140117_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009336 312.0
YYD2_k127_5140117_4 PFAM alpha beta hydrolase fold K01561 - 3.8.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 305.0
YYD2_k127_5140117_5 PFAM peptidase M16 domain protein K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 300.0
YYD2_k127_5140117_6 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003499 292.0
YYD2_k127_5140117_7 Memo-like protein K06990 - - 0.00000000000000000000000000000000000000000000000000000000001808 216.0
YYD2_k127_5140117_8 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000000000000000000000000000000000000000000000001894 207.0
YYD2_k127_5140117_9 PFAM AMMECR1 domain protein K09141 - - 0.0000000000000000000000000000000000000000001263 169.0
YYD2_k127_5141770_0 cAMP biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003739 332.0
YYD2_k127_5151281_0 PFAM Alcohol dehydrogenase GroES-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005487 481.0
YYD2_k127_5151281_1 Radical SAM superfamily K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 451.0
YYD2_k127_5151281_10 Protein of unknown function DUF72 - - - 0.0000002848 59.0
YYD2_k127_5151281_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 433.0
YYD2_k127_5151281_3 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 383.0
YYD2_k127_5151281_4 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000006463 237.0
YYD2_k127_5151281_5 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000001445 215.0
YYD2_k127_5151281_6 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000243 214.0
YYD2_k127_5151281_7 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000008218 185.0
YYD2_k127_5151281_8 Belongs to the UPF0403 family - - - 0.00000000000000000000000000000000000000000004763 165.0
YYD2_k127_5151281_9 Regulatory protein, FmdB family - - - 0.0000000006944 63.0
YYD2_k127_5151352_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1499.0
YYD2_k127_5151352_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 449.0
YYD2_k127_5151352_2 PFAM amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 387.0
YYD2_k127_5151352_3 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003869 392.0
YYD2_k127_5151352_4 Glycyl-tRNA synthetase alpha K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 364.0
YYD2_k127_5151352_5 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000003857 211.0
YYD2_k127_5151352_6 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000013 100.0
YYD2_k127_5151352_8 Acts as a magnesium transporter K06213 - - 0.0000000000107 66.0
YYD2_k127_5151352_9 Ankyrin repeats (many copies) - - - 0.0000002353 59.0
YYD2_k127_5153039_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 1.09e-252 797.0
YYD2_k127_5153039_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 419.0
YYD2_k127_5153039_10 - - - - 0.000001069 53.0
YYD2_k127_5153039_11 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0004153 49.0
YYD2_k127_5153039_2 Catalyzes the sodium-dependent transport of glutamate K03312 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 396.0
YYD2_k127_5153039_3 PFAM peptidase M24 K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 375.0
YYD2_k127_5153039_4 beta' subunit K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000002576 250.0
YYD2_k127_5153039_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000368 237.0
YYD2_k127_5153039_6 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000001656 190.0
YYD2_k127_5153039_7 - - - - 0.00000000000000000000001855 108.0
YYD2_k127_5153039_9 DoxX-like family - - - 0.0000001014 60.0
YYD2_k127_5173150_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 1.494e-225 729.0
YYD2_k127_5173150_1 geranylgeranyl reductase activity K14257 - 1.14.19.49 0.00000000000000000000000000000000000000000000000000002925 190.0
YYD2_k127_5173150_2 Toxic component of a toxin-antitoxin (TA) module. An RNase K07062 - - 0.00000000000000000000000000000000000000000000001967 175.0
YYD2_k127_5173150_3 Plasmid stability protein K21495 - - 0.00000000000000002037 86.0
YYD2_k127_5173262_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006112 587.0
YYD2_k127_5173262_1 von Willebrand factor (vWF) type A domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 509.0
YYD2_k127_5173262_2 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005927 295.0
YYD2_k127_5173262_3 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000001801 209.0
YYD2_k127_5173262_4 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.00000000000000000000000000000000006576 141.0
YYD2_k127_5173262_5 Uracil-DNA glycosylase K21929 GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0033958,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.0000000000006623 70.0
YYD2_k127_5173262_7 collagen metabolic process K08677 - - 0.0000005192 63.0
YYD2_k127_5173262_8 Fibronectin type III-like domain K05349 - 3.2.1.21 0.0000006854 62.0
YYD2_k127_518467_0 ABC transporter transmembrane region K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 612.0
YYD2_k127_518467_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005415 349.0
YYD2_k127_518467_2 Universal stress protein - - - 0.00000000000000000000000008059 115.0
YYD2_k127_518467_3 Cytochrome C' - - - 0.000000004342 63.0
YYD2_k127_5185722_0 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 471.0
YYD2_k127_5185722_1 e3 binding domain K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009582 383.0
YYD2_k127_5185722_2 response regulator K02481,K07715 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 368.0
YYD2_k127_5185722_3 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000000000000000000000000000005467 153.0
YYD2_k127_5185722_4 regulation of translation K03530 - - 0.0000000000000000000837 93.0
YYD2_k127_5187009_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 511.0
YYD2_k127_5187009_1 Transcriptional regulator PadR-like family - - - 0.000009181 51.0
YYD2_k127_5187009_2 efflux transmembrane transporter activity - - - 0.0000543 48.0
YYD2_k127_5187934_0 Extradiol ring-cleavage dioxygenase class III protein subunit B K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003521 255.0
YYD2_k127_5187934_1 - - - - 0.0000000000000000000000000000000000000000000003918 179.0
YYD2_k127_5187934_2 alginic acid biosynthetic process - - - 0.00000000000000000000000000000000000000000002101 172.0
YYD2_k127_5187934_3 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000008014 144.0
YYD2_k127_5187934_4 - - - - 0.0000000003193 64.0
YYD2_k127_5190727_0 protein kinase activity K06915 - - 9.121e-238 759.0
YYD2_k127_5190727_1 Aminomethyltransferase folate-binding domain K15066 - 2.1.1.341 1.744e-201 634.0
YYD2_k127_5190727_10 TIGRFAM drug resistance transporter, Bcr CflA subfamily K07552 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005801 377.0
YYD2_k127_5190727_11 Major facilitator Superfamily K08195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 370.0
YYD2_k127_5190727_12 UDP-glucoronosyl and UDP-glucosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008894 346.0
YYD2_k127_5190727_13 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009699 295.0
YYD2_k127_5190727_14 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000002427 252.0
YYD2_k127_5190727_15 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000005795 245.0
YYD2_k127_5190727_16 Dimerisation domain of Zinc Transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000001883 233.0
YYD2_k127_5190727_17 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000000000000000003834 206.0
YYD2_k127_5190727_18 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.0000000000000000000000000000000000000000000000000000001249 200.0
YYD2_k127_5190727_19 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000001305 185.0
YYD2_k127_5190727_2 oligopeptide transporter, OPT family - - - 1.184e-195 644.0
YYD2_k127_5190727_20 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000001962 164.0
YYD2_k127_5190727_21 Glyoxalase-like domain K05606 - 5.1.99.1 0.00000000000000000000000000000000000001004 147.0
YYD2_k127_5190727_22 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.00000000000000000000000000000000000001705 153.0
YYD2_k127_5190727_23 PFAM Auxin Efflux Carrier K07088 - - 0.0000000000000000000000000000000000001359 153.0
YYD2_k127_5190727_24 CarD-like/TRCF domain K07736 GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009405,GO:0009605,GO:0009987,GO:0009991,GO:0015968,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0040007,GO:0042594,GO:0044419,GO:0050896,GO:0051704,GO:0051716,GO:0071496 - 0.0000000000000000000000000000000000005856 149.0
YYD2_k127_5190727_25 oxidoreductase activity - - - 0.0000000000000000003194 103.0
YYD2_k127_5190727_26 Aminomethyltransferase folate-binding domain K15066 - 2.1.1.341 0.00000000000004821 72.0
YYD2_k127_5190727_27 - - - - 0.0000002094 64.0
YYD2_k127_5190727_3 Sulfite reductase K00366,K00381,K00392 - 1.7.7.1,1.8.1.2,1.8.7.1 1.264e-194 624.0
YYD2_k127_5190727_4 Peptidase family M3 K01392 - 3.4.24.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 551.0
YYD2_k127_5190727_5 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 507.0
YYD2_k127_5190727_6 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 474.0
YYD2_k127_5190727_7 Putative zinc-binding metallo-peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 396.0
YYD2_k127_5190727_8 ATP-grasp domain K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 378.0
YYD2_k127_5190727_9 homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 379.0
YYD2_k127_5197461_0 CoA binding domain - - - 0.0 1176.0
YYD2_k127_5197461_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1120.0
YYD2_k127_5197461_10 YtkA-like - - - 0.0002928 51.0
YYD2_k127_5197461_2 Aldehyde dehydrogenase family K00146,K11947 - 1.2.1.39 4.206e-234 736.0
YYD2_k127_5197461_3 Sugar (and other) transporter - - - 3.468e-218 685.0
YYD2_k127_5197461_4 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate K07749 - 2.8.3.16 2.09e-210 656.0
YYD2_k127_5197461_5 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 617.0
YYD2_k127_5197461_6 Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003386 374.0
YYD2_k127_5197461_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.00000000000000000000000000000000000000005959 169.0
YYD2_k127_5197461_8 Peptidase, M16 K07263 - - 0.000000000001381 69.0
YYD2_k127_5197461_9 Outer membrane efflux protein K18904 - - 0.000001051 61.0
YYD2_k127_52159_0 lysine biosynthetic process via aminoadipic acid - - - 5.716e-216 706.0
YYD2_k127_52159_1 Protein of unknown function (DUF3500) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 526.0
YYD2_k127_52159_2 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005074 453.0
YYD2_k127_52159_3 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 441.0
YYD2_k127_52159_4 Putative neutral zinc metallopeptidase K07054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 327.0
YYD2_k127_52159_5 COG0644 Dehydrogenases (flavoproteins) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 315.0
YYD2_k127_52159_6 PFAM OsmC family protein K04063 - - 0.000000000000000000000000000000000000000000000000000000294 203.0
YYD2_k127_52159_7 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000000000000097 166.0
YYD2_k127_5225206_0 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000002034 169.0
YYD2_k127_5225206_1 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000006209 81.0
YYD2_k127_5225206_2 Domain of unknown function (DUF892) - - - 0.0000005898 53.0
YYD2_k127_5225206_4 - - - - 0.00004143 54.0
YYD2_k127_5256708_0 H( )-stimulated, divalent metal cation uptake system K03322 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009541 597.0
YYD2_k127_5256708_1 Di-haem oxidoreductase, putative peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000241 296.0
YYD2_k127_5256708_2 iron dependent repressor K03709 - - 0.00000000000000000000000000000000000000000000000000002399 209.0
YYD2_k127_5256708_3 Pfam Transposase IS66 - - - 0.0000000000000000000000000000000000000000000000001412 198.0
YYD2_k127_5256708_4 Belongs to the universal stress protein A family - - - 0.0000000000003238 82.0
YYD2_k127_5256708_5 cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.000000000009946 74.0
YYD2_k127_5256708_6 HAD-hyrolase-like K01091 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0031404,GO:0033554,GO:0034641,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.1.3.18 0.00000002838 57.0
YYD2_k127_5268126_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 3.504e-209 657.0
YYD2_k127_5268126_1 Phosphate ABC transporter substrate-binding protein, PhoT family K02040 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002966 366.0
YYD2_k127_5268126_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000419 365.0
YYD2_k127_5268126_3 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 364.0
YYD2_k127_5268126_4 Binding-protein-dependent transport system inner membrane component K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 314.0
YYD2_k127_5268126_5 Protein of unknown function DUF47 K02039,K07220 GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.00000000000000000000000000000000000000000000000000000000000000002067 230.0
YYD2_k127_5268126_6 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000006983 203.0
YYD2_k127_5268126_7 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.000000004025 60.0
YYD2_k127_5277020_0 PQQ-like domain K00114 - 1.1.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 516.0
YYD2_k127_5277020_1 Oxidoreductase molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003871 265.0
YYD2_k127_5277020_2 cytochrome - - - 0.0000000000000000000000000000000000000000000000000899 188.0
YYD2_k127_5277020_3 Domain of unknown function (DUF305) - - - 0.00004872 46.0
YYD2_k127_5295452_0 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 518.0
YYD2_k127_5295452_1 protein kinase related protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 477.0
YYD2_k127_5295452_2 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006118 328.0
YYD2_k127_5295452_3 protein kinase related protein - - - 0.0000000005768 67.0
YYD2_k127_5318393_0 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 389.0
YYD2_k127_5318393_1 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006321 292.0
YYD2_k127_5318393_10 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.0000000000000000000000001123 113.0
YYD2_k127_5318393_12 amidohydrolase - - - 0.00000000000000000000001939 115.0
YYD2_k127_5318393_2 mandelate racemase muconate lactonizing K01684,K01781,K08323 - 4.2.1.6,4.2.1.8,5.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004714 293.0
YYD2_k127_5318393_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000002598 253.0
YYD2_k127_5318393_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000006287 227.0
YYD2_k127_5318393_5 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.0000000000000000000000000000000000000000001468 167.0
YYD2_k127_5318393_6 Tannase and feruloyl esterase - - - 0.00000000000000000000000000000000000000001106 154.0
YYD2_k127_5318393_7 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000014 144.0
YYD2_k127_5318393_8 pfam nudix - - - 0.000000000000000000000000000001464 134.0
YYD2_k127_5318393_9 - - - - 0.000000000000000000000000003801 121.0
YYD2_k127_5328174_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 6.214e-265 824.0
YYD2_k127_5328174_1 phosphoenolpyruvate carboxykinase (ATP) activity K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 7.139e-226 711.0
YYD2_k127_5328174_10 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 312.0
YYD2_k127_5328174_11 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 300.0
YYD2_k127_5328174_12 MOFRL family K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 301.0
YYD2_k127_5328174_13 PFAM alanine racemase domain protein K20757 - 4.3.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000421 292.0
YYD2_k127_5328174_14 Cell division ATP-binding protein ftsE K09811,K09812 GO:0000166,GO:0000287,GO:0000910,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007049,GO:0008144,GO:0008150,GO:0008356,GO:0009898,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019897,GO:0019898,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0030145,GO:0030554,GO:0031234,GO:0032153,GO:0032506,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042173,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043937,GO:0043938,GO:0044085,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0046677,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1902531 - 0.000000000000000000000000000000000000000000000000000000000000000000000000002215 260.0
YYD2_k127_5328174_15 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001205 255.0
YYD2_k127_5328174_16 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000004009 217.0
YYD2_k127_5328174_17 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000002282 218.0
YYD2_k127_5328174_18 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000006256 185.0
YYD2_k127_5328174_19 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000004364 184.0
YYD2_k127_5328174_2 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 1.542e-199 647.0
YYD2_k127_5328174_20 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 - 0.000000000000000000000000000000000002691 141.0
YYD2_k127_5328174_21 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000009834 151.0
YYD2_k127_5328174_22 FAD linked oxidases, C-terminal domain K06911 - - 0.00000000000000000000000000000000763 130.0
YYD2_k127_5328174_23 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811,K09812 GO:0000910,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006928,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0008356,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009966,GO:0009987,GO:0010033,GO:0010646,GO:0016020,GO:0016021,GO:0016043,GO:0019221,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0030312,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0032153,GO:0032506,GO:0034097,GO:0040007,GO:0040011,GO:0042173,GO:0042221,GO:0043207,GO:0043937,GO:0043938,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070098,GO:0070297,GO:0070887,GO:0071310,GO:0071345,GO:0071840,GO:0071944,GO:0071976,GO:0090529,GO:1902531 - 0.0000000000000000000000000000004559 134.0
YYD2_k127_5328174_24 von Willebrand factor, type A K07114 - - 0.000000000000000000000000001159 126.0
YYD2_k127_5328174_25 TIGRFAM TonB family protein K03832 - - 0.0000000000000000000000006626 115.0
YYD2_k127_5328174_26 DNA-templated transcription, initiation K03088 - - 0.0000000000000000001404 98.0
YYD2_k127_5328174_27 TIGRFAM TonB K03832 - - 0.0000000000000000008764 95.0
YYD2_k127_5328174_28 YjbR - - - 0.000000000000001403 87.0
YYD2_k127_5328174_29 DinB superfamily - - - 0.00000000000000388 82.0
YYD2_k127_5328174_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 554.0
YYD2_k127_5328174_30 Bacterial regulatory protein, Fis family - - - 0.0000000000004592 72.0
YYD2_k127_5328174_31 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000008812 69.0
YYD2_k127_5328174_32 Heavy-metal resistance - - - 0.00000000015 67.0
YYD2_k127_5328174_4 Two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 517.0
YYD2_k127_5328174_5 LytB protein K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 431.0
YYD2_k127_5328174_6 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005895 440.0
YYD2_k127_5328174_7 PFAM SAICAR synthetase K01923,K13713 - 6.3.2.6,6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 382.0
YYD2_k127_5328174_8 ATP-binding region, ATPase domain protein domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 401.0
YYD2_k127_5328174_9 Citrate transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 349.0
YYD2_k127_53294_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 3.071e-250 782.0
YYD2_k127_53294_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 332.0
YYD2_k127_53294_2 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007553 247.0
YYD2_k127_53294_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 - 0.0000000000000000000000000000000005204 138.0
YYD2_k127_53294_4 - - - - 0.0004929 49.0
YYD2_k127_5343916_0 lyase activity K11645 GO:0003674,GO:0003824,GO:0004332,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016829,GO:0016830,GO:0016832,GO:0042802,GO:0044424,GO:0044444,GO:0044464 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 538.0
YYD2_k127_5343916_1 COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006074 539.0
YYD2_k127_5343916_10 FR47-like protein - - - 0.0000000000000000000000000000000001883 135.0
YYD2_k127_5343916_11 LysE type translocator - - - 0.0000000000000000000000000000000006691 138.0
YYD2_k127_5343916_12 Signal peptidase (SPase) II K03101 - 3.4.23.36 0.00000000000000000000000000000004421 131.0
YYD2_k127_5343916_13 Ankyrin repeats (many copies) - - - 0.0000000000000000000000000005895 125.0
YYD2_k127_5343916_14 - - - - 0.00000000000000000007506 96.0
YYD2_k127_5343916_15 Thiopurine S-methyltransferase - - - 0.000004009 57.0
YYD2_k127_5343916_16 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00001629 48.0
YYD2_k127_5343916_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005277 332.0
YYD2_k127_5343916_3 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 - 2.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000251 235.0
YYD2_k127_5343916_4 GDP-mannose mannosyl hydrolase activity K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000000001751 190.0
YYD2_k127_5343916_5 phosphatidylcholine synthase K01004 - 2.7.8.24 0.0000000000000000000000000000000000000000000000000007104 193.0
YYD2_k127_5343916_6 peptide deformylase activity K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.0000000000000000000000000000000000000000000001685 173.0
YYD2_k127_5343916_7 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000002384 178.0
YYD2_k127_5343916_8 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000000002539 154.0
YYD2_k127_5369264_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.0 1126.0
YYD2_k127_5369264_1 Glycosyl hydrolase family 67 C-terminus K01235 - 3.2.1.139 0.0 1028.0
YYD2_k127_5369264_10 Glycosyl hydrolase family 57 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008752 538.0
YYD2_k127_5369264_11 TIGRFAM acetaldehyde dehydrogenase (acetylating) K00132 - 1.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 517.0
YYD2_k127_5369264_12 exonuclease K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 471.0
YYD2_k127_5369264_13 COG1131 ABC-type multidrug transport system ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004428 432.0
YYD2_k127_5369264_14 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 419.0
YYD2_k127_5369264_15 FGGY family of carbohydrate kinases, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006672 415.0
YYD2_k127_5369264_16 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K08483 - 2.7.3.9,2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007907 414.0
YYD2_k127_5369264_17 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 410.0
YYD2_k127_5369264_18 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 407.0
YYD2_k127_5369264_19 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005185 381.0
YYD2_k127_5369264_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 1.703e-306 957.0
YYD2_k127_5369264_20 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 374.0
YYD2_k127_5369264_21 Permease YjgP YjgQ family protein K07091,K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 378.0
YYD2_k127_5369264_22 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 345.0
YYD2_k127_5369264_23 Lysin motif K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000419 354.0
YYD2_k127_5369264_24 Type ii and iii secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 351.0
YYD2_k127_5369264_25 lipopolysaccharide transport protein B ATP-binding component of ABC superfamily K01990,K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 332.0
YYD2_k127_5369264_26 PFAM Aminotransferase class I and II K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006999 314.0
YYD2_k127_5369264_27 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 308.0
YYD2_k127_5369264_28 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 299.0
YYD2_k127_5369264_29 Belongs to the 'phage' integrase family K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 297.0
YYD2_k127_5369264_3 MutS domain I K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 3.685e-255 814.0
YYD2_k127_5369264_30 Type II secretion system (T2SS), protein F K02455,K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 297.0
YYD2_k127_5369264_31 Cobyrinic acid ac-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004999 283.0
YYD2_k127_5369264_32 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.00000000000000000000000000000000000000000000000000000000000000000000000000003663 270.0
YYD2_k127_5369264_33 Abc transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005784 260.0
YYD2_k127_5369264_34 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001253 259.0
YYD2_k127_5369264_35 TolB amino-terminal domain K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019534,GO:0019904,GO:0022857,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901998 - 0.00000000000000000000000000000000000000000000000000000000000000000007473 249.0
YYD2_k127_5369264_36 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K02564 - 3.5.99.6 0.00000000000000000000000000000000000000000000000000000000000000005637 229.0
YYD2_k127_5369264_37 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000002381 228.0
YYD2_k127_5369264_38 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000004919 218.0
YYD2_k127_5369264_39 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000004974 211.0
YYD2_k127_5369264_4 PFAM Type II secretion system protein E K02652 - - 1.243e-232 733.0
YYD2_k127_5369264_40 chromosome segregation K03497 - - 0.00000000000000000000000000000000000000000000000000000000002675 216.0
YYD2_k127_5369264_41 BlaR1 peptidase M56 - - - 0.00000000000000000000000000000000000000000000000000000000005476 228.0
YYD2_k127_5369264_42 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000005774 199.0
YYD2_k127_5369264_43 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 4.1.1.65 0.000000000000000000000000000000000000000000000000000002329 198.0
YYD2_k127_5369264_44 MotA TolQ ExbB proton channel K03562 - - 0.000000000000000000000000000000000000000000000000000005731 199.0
YYD2_k127_5369264_45 Histidine kinase K13598 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000001477 214.0
YYD2_k127_5369264_46 BadF BadG BcrA BcrD - GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006040,GO:0006044,GO:0006082,GO:0006793,GO:0006796,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0045127,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901071,GO:1901135,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000002976 190.0
YYD2_k127_5369264_47 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000115 166.0
YYD2_k127_5369264_48 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000000000000000002201 166.0
YYD2_k127_5369264_49 Mannose-6-phosphate isomerase - - - 0.0000000000000000000000000000000000000000003395 160.0
YYD2_k127_5369264_5 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K12661 - 4.2.1.90 2.436e-198 624.0
YYD2_k127_5369264_50 Penicillinase repressor - - - 0.00000000000000000000000000000000000000006133 154.0
YYD2_k127_5369264_51 Carbon dioxide concentrating mechanism carboxysome shell protein K04027 - - 0.000000000000000000000000000000000000001796 148.0
YYD2_k127_5369264_52 Peptidase family M23 - - - 0.0000000000000000000000000000000000001064 154.0
YYD2_k127_5369264_53 COG2893 Phosphotransferase system, mannose fructose-specific component IIA K02793 - 2.7.1.191 0.00000000000000000000000000000000008667 137.0
YYD2_k127_5369264_54 PHP domain protein - - - 0.0000000000000000000000000000000001621 152.0
YYD2_k127_5369264_55 OmpA family K03640 - - 0.0000000000000000000000000000000002728 141.0
YYD2_k127_5369264_56 - - - - 0.0000000000000000000000000000001803 132.0
YYD2_k127_5369264_57 Glycoprotease family K01409,K14742 - 2.3.1.234 0.000000000000000000000000000001184 131.0
YYD2_k127_5369264_58 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000000000000002921 134.0
YYD2_k127_5369264_59 Type II secretion system protein G K02456 - - 0.0000000000000000000000000001177 121.0
YYD2_k127_5369264_6 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009115 605.0
YYD2_k127_5369264_60 Pilus assembly protein K02662 - - 0.00000000000000000000002454 112.0
YYD2_k127_5369264_61 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000000000002731 101.0
YYD2_k127_5369264_62 phosphocarrier protein HPr K11189 - - 0.0000000000000000000006219 98.0
YYD2_k127_5369264_63 - - - - 0.000000000000000000004788 100.0
YYD2_k127_5369264_64 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000004871 99.0
YYD2_k127_5369264_65 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.00000000000000000009817 96.0
YYD2_k127_5369264_67 PQQ enzyme repeat K17713 - - 0.0000000000000001672 93.0
YYD2_k127_5369264_68 PFAM Uncharacterised BCR, COG1649 - - - 0.00000000000003807 85.0
YYD2_k127_5369264_69 general secretion pathway protein K02456,K02650 - - 0.00000000000004945 85.0
YYD2_k127_5369264_7 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 572.0
YYD2_k127_5369264_71 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000001454 70.0
YYD2_k127_5369264_72 transport - - - 0.00000003149 64.0
YYD2_k127_5369264_73 - - - - 0.00000006867 66.0
YYD2_k127_5369264_74 BlaR1 peptidase M56 - - - 0.00000007624 63.0
YYD2_k127_5369264_75 Protein of unknown function (DUF465) - - - 0.0000002636 56.0
YYD2_k127_5369264_76 PFAM Fimbrial assembly family protein K02663 - - 0.000001106 60.0
YYD2_k127_5369264_77 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000001241 60.0
YYD2_k127_5369264_78 - - - - 0.000002558 56.0
YYD2_k127_5369264_79 Tetratricopeptide repeat - - - 0.000005074 57.0
YYD2_k127_5369264_8 PFAM Xylose isomerase domain protein TIM barrel K01805 - 5.3.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002941 556.0
YYD2_k127_5369264_80 TonB C terminal - - - 0.00004235 54.0
YYD2_k127_5369264_81 lipopolysaccharide transport K09774 - - 0.00005865 56.0
YYD2_k127_5369264_82 - - - - 0.0001019 51.0
YYD2_k127_5369264_83 Pilus assembly protein, PilO K02664 - - 0.0001671 51.0
YYD2_k127_5369264_9 PFAM Magnesium chelatase, ChlI subunit K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 543.0
YYD2_k127_5378637_0 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 554.0
YYD2_k127_5378637_1 PFAM peptidase K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004883 336.0
YYD2_k127_5378637_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009018 332.0
YYD2_k127_5378637_3 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001281 274.0
YYD2_k127_5378637_4 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000004329 228.0
YYD2_k127_5378637_5 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000005342 116.0
YYD2_k127_5378637_6 Cytochrome c - - - 0.000000000000000000000000005716 115.0
YYD2_k127_5378637_7 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K06187,K09747 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - 0.0000000000000000000000004289 107.0
YYD2_k127_5378637_8 - - - - 0.00000000006109 64.0
YYD2_k127_5378637_9 Domain of unknown function (DUF4203) - - - 0.000314 51.0
YYD2_k127_5398184_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008829 283.0
YYD2_k127_5398184_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000004694 241.0
YYD2_k127_5398184_2 PFAM Glycosyl transferase, group 1 K06338,K12995 - 2.4.1.348 0.0000000000000000000000000000000000000000000000000000000000000000003133 252.0
YYD2_k127_5398184_3 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000001606 211.0
YYD2_k127_5398184_4 geranylgeranyl reductase activity K06444,K17830 - 1.3.1.101,1.3.7.11,5.5.1.18 0.0000000000000000000000000000000000000000000000000001073 200.0
YYD2_k127_5398184_5 lipopolysaccharide 3-alpha-galactosyltransferase activity - - - 0.000000000000000000000000000000000372 148.0
YYD2_k127_5398184_6 Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway K15521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009987,GO:0010125,GO:0010126,GO:0016137,GO:0016138,GO:0016740,GO:0016757,GO:0016758,GO:0044237,GO:0044249,GO:0044272,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659 2.4.1.250 0.00000000000000000000992 105.0
YYD2_k127_5398184_7 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000009336 72.0
YYD2_k127_5398184_8 PFAM Methyltransferase type 11 - - - 0.00000002409 61.0
YYD2_k127_5398184_9 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.000227 53.0
YYD2_k127_5406575_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008992 599.0
YYD2_k127_5406575_1 Glucose / Sorbosone dehydrogenase K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 346.0
YYD2_k127_5406575_2 Belongs to the ABC transporter superfamily K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004107 344.0
YYD2_k127_5406575_3 PFAM extracellular solute-binding protein family 1 K02027,K10236 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 294.0
YYD2_k127_5406575_4 binding-protein-dependent transport systems inner membrane component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002198 267.0
YYD2_k127_5406575_5 PFAM binding-protein-dependent transport systems inner membrane component K02025,K10237 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009782 267.0
YYD2_k127_5406575_6 protein methyltransferase activity K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000003023 240.0
YYD2_k127_5406575_7 GntR family transcriptional regulator K07979 - - 0.00000000000000003861 85.0
YYD2_k127_5406575_8 phenazine biosynthesis protein PhzF family K06998 - 5.3.3.17 0.00000000000009328 81.0
YYD2_k127_540685_0 response to abiotic stimulus K03086,K06867,K06886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003502 406.0
YYD2_k127_540685_1 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000112 213.0
YYD2_k127_540685_2 Histidine kinase - - - 0.00000000000002104 74.0
YYD2_k127_5412928_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K01147,K12573 - 3.1.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 537.0
YYD2_k127_5412928_1 adenylate kinase K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006385 507.0
YYD2_k127_5412928_2 - - - - 0.000000000000000000000002512 112.0
YYD2_k127_5412955_0 MacB-like periplasmic core domain - - - 2.652e-286 903.0
YYD2_k127_5412955_1 transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005465 610.0
YYD2_k127_5412955_2 Pyridoxal-dependent decarboxylase conserved domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007355 571.0
YYD2_k127_5412955_3 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 448.0
YYD2_k127_5412955_4 protein-containing complex disassembly K02837,K07133 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009298 260.0
YYD2_k127_5412955_5 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003157 280.0
YYD2_k127_5412955_6 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000005543 241.0
YYD2_k127_5412955_8 Cold shock protein domain - - - 0.0000000000005351 78.0
YYD2_k127_5412955_9 efflux transmembrane transporter activity - - - 0.00000002922 62.0
YYD2_k127_5422887_0 Heat shock 70 kDa protein K04043 - - 2.81e-296 919.0
YYD2_k127_5422887_1 PQQ-like domain K05889 - 1.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007591 548.0
YYD2_k127_5422887_10 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000003306 249.0
YYD2_k127_5422887_11 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000001033 251.0
YYD2_k127_5422887_12 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000007389 206.0
YYD2_k127_5422887_13 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000004248 168.0
YYD2_k127_5422887_14 - - - - 0.00000000000000000000000000000000000000001514 166.0
YYD2_k127_5422887_15 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000000000000000000000002598 157.0
YYD2_k127_5422887_16 Trehalose utilisation - - - 0.00000000000000000000000000000000007746 148.0
YYD2_k127_5422887_17 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000003097 130.0
YYD2_k127_5422887_18 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.000000000000000000006696 97.0
YYD2_k127_5422887_19 transport - - - 0.00000000000000001287 96.0
YYD2_k127_5422887_2 arylsulfatase activity K01132 - 3.1.6.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 517.0
YYD2_k127_5422887_20 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000002218 69.0
YYD2_k127_5422887_21 2OG-Fe(II) oxygenase superfamily K15429 - 2.1.1.228 0.0000000047 68.0
YYD2_k127_5422887_22 Hsp20/alpha crystallin family K13993 - - 0.00000002298 62.0
YYD2_k127_5422887_23 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000004339 63.0
YYD2_k127_5422887_24 haloacid dehalogenase-like hydrolase - - - 0.0001736 53.0
YYD2_k127_5422887_25 - - - - 0.0002372 48.0
YYD2_k127_5422887_3 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 470.0
YYD2_k127_5422887_4 Trehalose utilisation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008764 408.0
YYD2_k127_5422887_5 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008272 396.0
YYD2_k127_5422887_6 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003604 377.0
YYD2_k127_5422887_7 YmdB-like protein K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 314.0
YYD2_k127_5422887_8 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000002172 263.0
YYD2_k127_5422887_9 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000003771 265.0
YYD2_k127_5423390_0 PFAM sigma-54 factor interaction domain-containing protein, Propionate catabolism activator domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001533 239.0
YYD2_k127_5423390_1 PFAM Response regulator receiver domain K11624 - - 0.0000000000000005499 79.0
YYD2_k127_5423390_2 phosphorelay signal transduction system - - - 0.000000000006902 70.0
YYD2_k127_5425712_0 Carboxypeptidase regulatory-like domain - - - 2.358e-309 983.0
YYD2_k127_5425712_1 ABC transporter K10441 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 487.0
YYD2_k127_5425712_2 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004573 387.0
YYD2_k127_5425712_3 NIF3 (NGG1p interacting factor 3) - - - 0.0000000000000000000000000000000000000000000000000000000000000258 221.0
YYD2_k127_5428431_0 Carboxypeptidase regulatory-like domain - - - 3.869e-223 734.0
YYD2_k127_5428431_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 625.0
YYD2_k127_5428431_11 Cytochrome c K00406,K12263 - - 0.000001815 61.0
YYD2_k127_5428431_2 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008573 463.0
YYD2_k127_5428431_3 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004626 368.0
YYD2_k127_5428431_4 response to abiotic stimulus K06867 - - 0.000000000000000000000000000000000000000000000000000000000000008378 237.0
YYD2_k127_5428431_5 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.0000000000000000000000000000000000000000000000008416 182.0
YYD2_k127_5428431_6 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000000008068 176.0
YYD2_k127_5428431_7 - K02172 - - 0.0000000000000000000000000000000006193 143.0
YYD2_k127_5428431_8 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000437 127.0
YYD2_k127_5428431_9 - - - - 0.0000000000000000009176 91.0
YYD2_k127_5429198_0 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 393.0
YYD2_k127_5429198_1 - - - - 0.000001607 55.0
YYD2_k127_5430562_0 DNA topological change K03168 - 5.99.1.2 9.582e-219 707.0
YYD2_k127_5430562_1 DNA topological change K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 597.0
YYD2_k127_5430562_10 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000003243 155.0
YYD2_k127_5430562_11 PFAM Prenyltransferase squalene oxidase K06015 - 3.5.1.81 0.0000000000000000000001553 113.0
YYD2_k127_5430562_2 L-lactate dehydrogenase K00101,K16422 - 1.1.2.3,1.1.3.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 441.0
YYD2_k127_5430562_3 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 354.0
YYD2_k127_5430562_4 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 336.0
YYD2_k127_5430562_5 cobalamin-transporting ATPase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 334.0
YYD2_k127_5430562_6 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006385 280.0
YYD2_k127_5430562_7 ankyrin repeat K15503 - - 0.0000000000000000000000000000000000000000000000000000000000004503 231.0
YYD2_k127_5430562_8 Ankyrin repeats (3 copies) - - - 0.000000000000000000000000000000000000000000000000000000005451 219.0
YYD2_k127_5430562_9 - - - - 0.0000000000000000000000000000000000000000000000000000001564 199.0
YYD2_k127_5433127_0 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 1.167e-304 952.0
YYD2_k127_5433127_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.361e-243 762.0
YYD2_k127_5433127_10 DNA-templated transcription, initiation K02405 - - 0.00000000000000000000000000000005561 127.0
YYD2_k127_5433127_11 - - - - 0.0000000002799 64.0
YYD2_k127_5433127_2 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031420,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007768 576.0
YYD2_k127_5433127_3 Osmosensitive K channel His kinase sensor K07646 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 446.0
YYD2_k127_5433127_4 Cation transport protein K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 374.0
YYD2_k127_5433127_5 Histidine kinase K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000002378 273.0
YYD2_k127_5433127_6 TrkA-C domain K03499 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000000000000000000000000002426 236.0
YYD2_k127_5433127_7 Response regulator receiver K07667 - - 0.00000000000000000000000000000000000000000000000000000000000000002655 230.0
YYD2_k127_5433127_8 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 0.00000000000000000000000000000000000000000000008941 175.0
YYD2_k127_5433127_9 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000001949 134.0
YYD2_k127_5451102_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 529.0
YYD2_k127_5451102_1 - - - - 0.000000000000000000000000000000000000000439 154.0
YYD2_k127_5451102_2 - - - - 0.000002602 49.0
YYD2_k127_5457491_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 505.0
YYD2_k127_5457491_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.000006783 49.0
YYD2_k127_5459359_0 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 539.0
YYD2_k127_5459359_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 442.0
YYD2_k127_5459359_2 TIGRFAM RarD protein, DMT superfamily transporter K05786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006027 302.0
YYD2_k127_5459359_3 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000002692 190.0
YYD2_k127_5459359_4 Pfam:Pyridox_oxidase - - - 0.000000000000000000000000000000000000000000002288 168.0
YYD2_k127_5459359_5 PFAM Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000007191 168.0
YYD2_k127_5459359_6 Peptidase family M28 - - - 0.000000000000000000000000007342 112.0
YYD2_k127_5461898_0 PQQ enzyme repeat - - - 0.0000000000000000000009623 99.0
YYD2_k127_5461898_2 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000003589 72.0
YYD2_k127_546396_0 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008008 321.0
YYD2_k127_546396_1 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002997 269.0
YYD2_k127_546396_2 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000002458 59.0
YYD2_k127_5465281_0 Amidohydrolase family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003086 352.0
YYD2_k127_5465281_1 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000000000000002383 216.0
YYD2_k127_5465281_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000001104 213.0
YYD2_k127_5465281_3 COG3404 Methenyl tetrahydrofolate cyclohydrolase - - - 0.000000000000000000003079 102.0
YYD2_k127_5465281_4 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.0000002052 55.0
YYD2_k127_5467235_0 Tannase and feruloyl esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006799 473.0
YYD2_k127_5467235_1 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 429.0
YYD2_k127_5467235_2 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.000000000000000000000000000000000000000000000000000003368 199.0
YYD2_k127_5467235_3 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.0000000000001646 78.0
YYD2_k127_5467235_4 Belongs to the anti-sigma-factor antagonist family - - - 0.00000536 54.0
YYD2_k127_5467892_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 340.0
YYD2_k127_5467892_1 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004096 253.0
YYD2_k127_5467892_2 Helix-turn-helix XRE-family like proteins - - - 0.00003749 48.0
YYD2_k127_548427_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002585 590.0
YYD2_k127_548427_1 Iron-regulated membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005499 443.0
YYD2_k127_548427_2 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 293.0
YYD2_k127_5495992_0 Belongs to the ClpA ClpB family K03696 GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005677 467.0
YYD2_k127_5495992_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003791 280.0
YYD2_k127_5495992_2 Polysaccharide biosynthesis protein K15856 - 1.1.1.281 0.00000000000000000000000000000000000000000000000000000000000000000001494 243.0
YYD2_k127_5495992_3 ABC transporter K09697 - 3.6.3.7 0.000000000000000000000000000000000000000000000000000005016 196.0
YYD2_k127_5505956_0 Dehydrogenase K00117 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 512.0
YYD2_k127_5505956_1 2-keto-3-deoxy-L-rhamnonate aldolase activity K02510 - 4.1.2.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002624 278.0
YYD2_k127_5505956_2 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001427 287.0
YYD2_k127_5505956_3 Bacterial transcriptional regulator K13641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002641 249.0
YYD2_k127_5505956_4 Cytochrome c - - - 0.0000000000000000002549 94.0
YYD2_k127_5505956_5 Tetratricopeptide repeat - - - 0.00009995 54.0
YYD2_k127_5508727_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 2.019e-227 727.0
YYD2_k127_5508727_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 503.0
YYD2_k127_5508727_2 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 439.0
YYD2_k127_5508727_3 PQQ-like domain K00114 - 1.1.2.8 0.0005067 45.0
YYD2_k127_5514517_0 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000002537 216.0
YYD2_k127_5514517_1 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000000002163 141.0
YYD2_k127_5515487_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000001875 219.0
YYD2_k127_5515487_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000004288 124.0
YYD2_k127_5516092_0 PQQ-like domain K00114 - 1.1.2.8 7.553e-234 736.0
YYD2_k127_5516092_1 aminopeptidase - - - 1.153e-207 663.0
YYD2_k127_5516092_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006088 394.0
YYD2_k127_5516092_3 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002045 285.0
YYD2_k127_5516092_4 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006078 250.0
YYD2_k127_5516092_5 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000006168 241.0
YYD2_k127_5516092_7 Xylose isomerase domain protein TIM barrel - - - 0.00000000000000000001442 106.0
YYD2_k127_5520377_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004822 397.0
YYD2_k127_5520377_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008692 329.0
YYD2_k127_5520377_2 WD40 domain protein beta Propeller - - - 0.00000000000000000000000000000002335 134.0
YYD2_k127_5520377_3 - - - - 0.0000000003878 70.0
YYD2_k127_5520377_4 His Kinase A (phosphoacceptor) domain - - - 0.0008026 49.0
YYD2_k127_5521994_0 transmembrane transporter activity K08191 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 564.0
YYD2_k127_5521994_1 D-galactarate dehydratase / Altronate hydrolase, C terminus K16850 - 4.2.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 379.0
YYD2_k127_5521994_10 SAF K16849 - 4.2.1.7 0.0000000000000003898 85.0
YYD2_k127_5521994_2 ATPase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 371.0
YYD2_k127_5521994_3 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 344.0
YYD2_k127_5521994_4 response regulator K02481,K07715 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002351 259.0
YYD2_k127_5521994_5 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000003278 158.0
YYD2_k127_5521994_6 PFAM von Willebrand factor type A - - - 0.00000000000000000000000002286 127.0
YYD2_k127_5521994_7 KR domain - - - 0.0000000000000000000002126 96.0
YYD2_k127_5521994_8 von Willebrand factor, type A K07114 - - 0.000000000000000000001102 112.0
YYD2_k127_5521994_9 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000292 94.0
YYD2_k127_5523258_0 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 2.672e-225 707.0
YYD2_k127_5523258_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000527 436.0
YYD2_k127_5523258_10 - K01992,K19341 - - 0.00000000000000000000000001419 119.0
YYD2_k127_5523258_11 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.00000000007836 68.0
YYD2_k127_5523258_12 Belongs to the peptidase S8 family - - - 0.000007799 57.0
YYD2_k127_5523258_13 Putative diguanylate phosphodiesterase - - - 0.000105 52.0
YYD2_k127_5523258_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 325.0
YYD2_k127_5523258_3 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 321.0
YYD2_k127_5523258_4 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409,K03070 GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 312.0
YYD2_k127_5523258_5 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000002713 237.0
YYD2_k127_5523258_6 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000001699 214.0
YYD2_k127_5523258_7 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000005357 190.0
YYD2_k127_5523258_8 NUDIX domain - - - 0.00000000000000000000000000000000000006976 147.0
YYD2_k127_5523258_9 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000166 125.0
YYD2_k127_5548729_0 Peptidase family S41 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035 529.0
YYD2_k127_5548729_1 - - - - 0.000000000000000000000000000000000000000000000000002893 194.0
YYD2_k127_5548729_2 DNA-templated transcription, initiation K03088 - - 0.000006975 58.0
YYD2_k127_5561526_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005719 530.0
YYD2_k127_5561526_1 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003723 519.0
YYD2_k127_5561526_10 - - - - 0.0000000000000007673 84.0
YYD2_k127_5561526_11 helix_turn_helix, Lux Regulon K02479 - - 0.0000000003429 65.0
YYD2_k127_5561526_12 23S rRNA-intervening sequence protein - - - 0.00005738 49.0
YYD2_k127_5561526_2 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 507.0
YYD2_k127_5561526_3 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 481.0
YYD2_k127_5561526_4 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008442 392.0
YYD2_k127_5561526_5 metallopeptidase activity K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 331.0
YYD2_k127_5561526_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000003869 223.0
YYD2_k127_5561526_7 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000001557 158.0
YYD2_k127_5561526_8 methylamine metabolic process K15977 - - 0.000000000000000000000000000001275 125.0
YYD2_k127_5561526_9 - - - - 0.000000000000000000000000000005762 124.0
YYD2_k127_558960_0 Amidase K01426 - 3.5.1.4 4.763e-222 706.0
YYD2_k127_558960_1 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 467.0
YYD2_k127_558960_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000132 274.0
YYD2_k127_558960_3 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000001853 243.0
YYD2_k127_558960_4 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000007493 217.0
YYD2_k127_558960_5 von Willebrand factor, type A - - - 0.00000000000000000000000000000001817 138.0
YYD2_k127_558960_6 Frataxin-like domain K06202 - - 0.00000000000000000000288 97.0
YYD2_k127_5591558_0 Berberine and berberine like - - - 1.043e-276 855.0
YYD2_k127_5603108_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 2.276e-283 880.0
YYD2_k127_5603108_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000001115 178.0
YYD2_k127_5603108_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000004063 94.0
YYD2_k127_5614339_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006795 446.0
YYD2_k127_5614339_1 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 338.0
YYD2_k127_5614339_2 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002524 291.0
YYD2_k127_5614339_3 Aerotolerance regulator N-terminal - - - 0.000000000000000000000000000000000000000000101 181.0
YYD2_k127_5620038_0 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004807 507.0
YYD2_k127_5620038_1 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 388.0
YYD2_k127_5620038_10 PBS lyase HEAT domain protein repeat-containing protein - - - 0.00000000001282 70.0
YYD2_k127_5620038_11 Outer membrane protein, OMP85 family K07277 - - 0.000000006001 68.0
YYD2_k127_5620038_12 Domain of unknown function (DUF4136) - - - 0.000002466 57.0
YYD2_k127_5620038_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004463 254.0
YYD2_k127_5620038_3 Domain of unknown function (DUF3943) - - - 0.00000000000000000000000000000000000000000000000000000000003532 223.0
YYD2_k127_5620038_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000001915 211.0
YYD2_k127_5620038_6 - - - - 0.000000000000000000000000000000000687 139.0
YYD2_k127_5620038_7 Periplasmic or secreted lipoprotein - - - 0.000000000000000000000000000003889 130.0
YYD2_k127_5620038_8 histidine kinase A domain protein domain protein - - - 0.000000000000000001734 101.0
YYD2_k127_5620038_9 - - - - 0.00000000000000004352 90.0
YYD2_k127_5636772_0 Serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000000000002174 225.0
YYD2_k127_5636772_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000498 65.0
YYD2_k127_5638725_0 DNA topological change K03168 - 5.99.1.2 3.816e-227 730.0
YYD2_k127_5638725_1 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006142 376.0
YYD2_k127_5638725_2 response to abiotic stimulus K06867 - - 0.0000000000000000000000000000004702 139.0
YYD2_k127_5638725_3 SMART Tetratricopeptide domain protein - - - 0.000000003569 68.0
YYD2_k127_5639510_0 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 404.0
YYD2_k127_5639510_1 Enoyl-(Acyl carrier protein) reductase K21883 - 1.1.1.401 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 315.0
YYD2_k127_5639510_2 Short-chain dehydrogenase reductase sdr K18335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 312.0
YYD2_k127_5639510_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 0.00000000000000000000000000000000000000000000000000000000006488 207.0
YYD2_k127_5639510_4 Dehydratase family K13875 - 4.2.1.25 0.000000000000000000000000000000000000000000001866 164.0
YYD2_k127_5642381_0 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 548.0
YYD2_k127_5642381_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 442.0
YYD2_k127_5642381_2 PFAM Integral membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 297.0
YYD2_k127_5642381_3 Membrane - - - 0.0000000000000000000000004197 110.0
YYD2_k127_5645672_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 2.826e-199 651.0
YYD2_k127_5645672_1 MacB-like periplasmic core domain - - - 8.778e-199 646.0
YYD2_k127_5645672_10 Glucose / Sorbosone dehydrogenase K00117,K21430 - 1.1.5.2 0.000945 43.0
YYD2_k127_5645672_2 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002625 392.0
YYD2_k127_5645672_3 Maltose acetyltransferase K00661 - 2.3.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 316.0
YYD2_k127_5645672_4 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000006167 166.0
YYD2_k127_5645672_5 DNA-templated transcription, initiation K02405 - - 0.0000000000000000000000000000000000000000004294 161.0
YYD2_k127_5645672_6 - - - - 0.0000000000000000000000001774 119.0
YYD2_k127_5645672_7 efflux transmembrane transporter activity - - - 0.0000000001969 69.0
YYD2_k127_5645672_8 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000002499 53.0
YYD2_k127_5645672_9 AT-rich interactive domain-containing protein 5A - GO:0000122,GO:0000981,GO:0001067,GO:0001227,GO:0001501,GO:0001817,GO:0001819,GO:0002062,GO:0002237,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002700,GO:0002702,GO:0002703,GO:0002705,GO:0002706,GO:0002708,GO:0002709,GO:0002711,GO:0002718,GO:0002720,GO:0002724,GO:0002726,GO:0002791,GO:0002793,GO:0002819,GO:0002821,GO:0002822,GO:0002824,GO:0002825,GO:0002827,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003700,GO:0003712,GO:0003714,GO:0003723,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005730,GO:0006355,GO:0006357,GO:0007275,GO:0008134,GO:0008150,GO:0009605,GO:0009607,GO:0009617,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0019219,GO:0019222,GO:0030154,GO:0030331,GO:0031056,GO:0031058,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032496,GO:0032501,GO:0032502,GO:0032649,GO:0032660,GO:0032675,GO:0032680,GO:0032729,GO:0032740,GO:0032755,GO:0032760,GO:0032879,GO:0032880,GO:0032991,GO:0033043,GO:0033044,GO:0033993,GO:0035065,GO:0035066,GO:0035257,GO:0035258,GO:0035613,GO:0042221,GO:0042974,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043627,GO:0044212,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046965,GO:0046966,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0048869,GO:0050681,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051216,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051427,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0061448,GO:0065007,GO:0070013,GO:0070201,GO:0070887,GO:0071216,GO:0071219,GO:0071222,GO:0071310,GO:0071391,GO:0071396,GO:0080090,GO:0090087,GO:0097159,GO:0140110,GO:1901363,GO:1901700,GO:1901701,GO:1901983,GO:1901985,GO:1902275,GO:1902679,GO:1902680,GO:1902713,GO:1902715,GO:1903506,GO:1903507,GO:1903508,GO:1903530,GO:1903532,GO:1903555,GO:1903557,GO:1904467,GO:1904469,GO:1904951,GO:1905076,GO:1905078,GO:1905269,GO:2000112,GO:2000113,GO:2000316,GO:2000318,GO:2000554,GO:2000556,GO:2000756,GO:2000758,GO:2000778,GO:2001141,GO:2001252 - 0.0005913 44.0
YYD2_k127_5651816_0 transcription factor binding K02584,K12146,K12266,K15836,K21009 GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0001150,GO:0001158,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035326,GO:0042802,GO:0043170,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2000142,GO:2000144,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 509.0
YYD2_k127_5651816_1 Short repeat of unknown function (DUF308) - - - 0.000000000000000000000000000000000000000000000003044 194.0
YYD2_k127_5651816_2 Protein of unknown function (DUF1269) - - - 0.00000000000000000000000000000000000000000005797 173.0
YYD2_k127_5652099_0 Tripartite tricarboxylate transporter TctA family K07793 - - 7.318e-200 633.0
YYD2_k127_5652099_1 FAD dependent oxidoreductase K13796 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 609.0
YYD2_k127_5652099_2 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 544.0
YYD2_k127_5652099_3 utilization protein B K13795 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 382.0
YYD2_k127_5652099_4 Tripartite tricarboxylate transporter family receptor K07795 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 337.0
YYD2_k127_5656206_0 efflux transmembrane transporter activity - - - 1.828e-236 760.0
YYD2_k127_5656206_1 Protein of unknown function (DUF763) K09003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003543 600.0
YYD2_k127_5656206_10 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000002527 145.0
YYD2_k127_5656206_11 MgtC family K07507 - - 0.000000000000000000000000001152 125.0
YYD2_k127_5656206_12 Phospholipase D Active site motif K01115 - 3.1.4.4 0.000000000000000000000000002809 120.0
YYD2_k127_5656206_13 - - - - 0.00000000008601 69.0
YYD2_k127_5656206_14 sirohydrochlorin cobaltochelatase activity K03795 - 4.99.1.3 0.000000001129 63.0
YYD2_k127_5656206_15 - - - - 0.0009671 50.0
YYD2_k127_5656206_2 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006142 472.0
YYD2_k127_5656206_3 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.00000000000000000000000000000000000000000000000000004518 197.0
YYD2_k127_5656206_4 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000003867 196.0
YYD2_k127_5656206_5 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000000000000000000001071 188.0
YYD2_k127_5656206_6 - - - - 0.00000000000000000000000000000000000000000000001092 183.0
YYD2_k127_5656206_7 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000001042 174.0
YYD2_k127_5656206_8 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000002098 168.0
YYD2_k127_5656206_9 Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000000000000000398 162.0
YYD2_k127_5665069_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 3.982e-268 835.0
YYD2_k127_5665069_1 oxidoreductase activity, acting on diphenols and related substances as donors K09471 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0044424,GO:0044464,GO:0055114 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009575 580.0
YYD2_k127_5665069_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 327.0
YYD2_k127_5665069_3 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000003435 241.0
YYD2_k127_5665069_4 Helix-hairpin-helix domain K04477 - - 0.0000000000000000000000000000000000000000000003471 189.0
YYD2_k127_5665069_5 Pyridoxamine 5'-phosphate oxidase K00275 - 1.4.3.5 0.0000000000000000000000000002973 121.0
YYD2_k127_5674468_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 508.0
YYD2_k127_5674468_1 PFAM short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001576 246.0
YYD2_k127_5674468_2 DinB superfamily - - - 0.0000000000002633 73.0
YYD2_k127_5674468_3 Membrane - - - 0.0000000000002658 76.0
YYD2_k127_567956_0 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.000000000000000000000000000000000001339 159.0
YYD2_k127_567956_1 - - - - 0.000000000000000000000003305 113.0
YYD2_k127_5680974_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 632.0
YYD2_k127_5680974_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0030554,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006759 494.0
YYD2_k127_5680974_10 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.0000000000000000000000000000003597 133.0
YYD2_k127_5680974_11 ECF sigma factor - - - 0.00000000000000000000000000001093 126.0
YYD2_k127_5680974_12 DNA-templated transcription, initiation K02405 - - 0.0000000000000192 75.0
YYD2_k127_5680974_13 Cell division protein FtsQ K03589 - - 0.0000000002723 73.0
YYD2_k127_5680974_14 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00002358 49.0
YYD2_k127_5680974_2 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005196 482.0
YYD2_k127_5680974_3 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 441.0
YYD2_k127_5680974_4 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 427.0
YYD2_k127_5680974_5 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 401.0
YYD2_k127_5680974_6 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 346.0
YYD2_k127_5680974_7 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 339.0
YYD2_k127_5680974_8 Belongs to the SEDS family K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 340.0
YYD2_k127_5680974_9 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000001301 127.0
YYD2_k127_5682118_0 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 570.0
YYD2_k127_5682118_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000001414 235.0
YYD2_k127_5684775_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 3.007e-259 811.0
YYD2_k127_5684775_1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007643 502.0
YYD2_k127_5684775_2 MoeA N-terminal region (domain I and II) K03750,K07219 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 406.0
YYD2_k127_5684775_3 NAD binding K00333,K05579,K13378 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003203 346.0
YYD2_k127_5684775_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000002543 223.0
YYD2_k127_5684775_5 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.00000000000000000000000000000000000000000000000002876 188.0
YYD2_k127_5684775_6 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K00332 - 1.6.5.3 0.00000000000000000000000008212 113.0
YYD2_k127_5684775_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330,K05574 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.0000000000000000000000005566 108.0
YYD2_k127_5684775_8 PFAM IstB domain protein ATP-binding protein - - - 0.000002183 55.0
YYD2_k127_5684775_9 Recombinase K06400 - - 0.0001408 52.0
YYD2_k127_5687982_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000002583 134.0
YYD2_k127_5687982_1 Glycosyl Hydrolase Family 88 - - - 0.000000000000000000000000004467 113.0
YYD2_k127_5687982_2 - - - - 0.00000000000000001177 97.0
YYD2_k127_5688883_0 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000009438 223.0
YYD2_k127_5688883_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000165 137.0
YYD2_k127_5688883_2 pyrroloquinoline quinone binding - - - 0.000000000000000000005131 94.0
YYD2_k127_5688883_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0001682 46.0
YYD2_k127_5691896_0 serine-type endopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002848 283.0
YYD2_k127_5691896_1 membrane - - - 0.0000003972 62.0
YYD2_k127_5695601_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 436.0
YYD2_k127_5695601_1 geranylgeranyl reductase activity - - - 0.00000000000000000002979 94.0
YYD2_k127_5695601_2 - - - - 0.0000000007819 62.0
YYD2_k127_5696633_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 4.212e-197 642.0
YYD2_k127_5697022_0 belongs to the lyase 1 family. Argininosuccinate lyase subfamily K01755,K14681 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 394.0
YYD2_k127_5697022_1 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 351.0
YYD2_k127_5697022_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 GO:0003674,GO:0003824,GO:0003942,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002952 281.0
YYD2_k127_5697022_3 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.00000000000000000000000000000000000005015 159.0
YYD2_k127_5697022_4 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000003965 139.0
YYD2_k127_5697022_5 Regulates arginine biosynthesis genes K03402 - - 0.0000000000000000000000002141 113.0
YYD2_k127_5697022_6 PFAM Acetyltransferase (GNAT) family K00619 - 2.3.1.1 0.000001245 57.0
YYD2_k127_5697707_0 N-Acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 366.0
YYD2_k127_5697707_1 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000006643 243.0
YYD2_k127_5697707_2 SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000008199 141.0
YYD2_k127_5700531_0 PFAM Integral membrane protein TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 347.0
YYD2_k127_5700531_1 Belongs to the arylamine N-acetyltransferase family K00675 - 2.3.1.118 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 298.0
YYD2_k127_5700531_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000002316 160.0
YYD2_k127_5700531_3 lactoylglutathione lyase activity K03088 - - 0.0000000000000000000000000000000000004239 152.0
YYD2_k127_5700531_4 - - - - 0.0000000000000000000000000001074 119.0
YYD2_k127_5700531_5 - - - - 0.0000004365 57.0
YYD2_k127_5700531_6 Transcriptional regulator K03717 - - 0.0004566 43.0
YYD2_k127_5700531_7 - - - - 0.0009183 48.0
YYD2_k127_5702_0 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000001238 196.0
YYD2_k127_5702_1 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000002257 169.0
YYD2_k127_5702_2 Thioredoxin K03672 - 1.8.1.8 0.000000000000000000000000000000000504 136.0
YYD2_k127_5702_3 Cytochrome c - - - 0.000000000000000000000000000001764 126.0
YYD2_k127_5705665_0 DNA topological change - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006122 546.0
YYD2_k127_5705665_1 FAD binding domain K00481 - 1.14.13.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 508.0
YYD2_k127_5705665_2 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 441.0
YYD2_k127_5705665_3 PFAM Glucose Sorbosone dehydrogenase K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006094 310.0
YYD2_k127_5705665_4 Belongs to the UPF0145 family - - - 0.000000000000000000000000000000000003434 146.0
YYD2_k127_5705665_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000001666 111.0
YYD2_k127_5705665_6 Putative zinc-finger - - - 0.0000000000004245 78.0
YYD2_k127_5706676_0 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000000000000000000000000005928 182.0
YYD2_k127_5706676_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000009475 156.0
YYD2_k127_5706676_2 serine threonine protein kinase - - - 0.0000000005003 73.0
YYD2_k127_5706676_3 Serine threonine protein kinase - - - 0.00000005551 66.0
YYD2_k127_5708759_0 Branched-chain-amino-acid aminotransferase-like protein 3 K18482 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008153,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0019438,GO:0019752,GO:0032787,GO:0042537,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046482,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 299.0
YYD2_k127_5708759_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006874 255.0
YYD2_k127_5708759_2 - - - - 0.00000000000000000000000000000000000000000000000000158 198.0
YYD2_k127_5708759_3 - - - - 0.00000000000000000000000000000005248 133.0
YYD2_k127_5708759_4 Dodecin K09165 - - 0.000000000000000000022 94.0
YYD2_k127_5708759_6 Amidohydrolase family - - - 0.00002937 50.0
YYD2_k127_5709059_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 3.077e-244 779.0
YYD2_k127_5709059_1 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 418.0
YYD2_k127_5709059_10 - - - - 0.0000000008333 64.0
YYD2_k127_5709059_11 Putative addiction module component - - - 0.0000006275 54.0
YYD2_k127_5709059_12 CO dehydrogenase flavoprotein C-terminal domain - - - 0.00007002 48.0
YYD2_k127_5709059_2 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000007387 267.0
YYD2_k127_5709059_3 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000001195 250.0
YYD2_k127_5709059_4 Domain of unknown function (DUF3291) - - - 0.000000000000000000000000000000000000000007532 161.0
YYD2_k127_5709059_5 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000004841 109.0
YYD2_k127_5709059_6 Cupin domain - - - 0.000000000000000008435 87.0
YYD2_k127_5709059_7 Belongs to the 'phage' integrase family - - - 0.00000000000000001715 84.0
YYD2_k127_5709059_8 Belongs to the 'phage' integrase family - - - 0.00000000000001576 84.0
YYD2_k127_5709059_9 PFAM plasmid stabilization system - - - 0.00000000009769 66.0
YYD2_k127_5710869_0 FtsX-like permease family - - - 2.549e-204 676.0
YYD2_k127_5710869_1 COG1012 NAD-dependent aldehyde - - - 2.022e-198 628.0
YYD2_k127_5710869_10 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003923 269.0
YYD2_k127_5710869_11 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K02003,K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002334 249.0
YYD2_k127_5710869_12 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000007595 203.0
YYD2_k127_5710869_13 NmrA-like family - - - 0.00000000000000000000000000000000000000002859 171.0
YYD2_k127_5710869_14 YjbR - - - 0.0000000000000000000000000000000000000004897 154.0
YYD2_k127_5710869_15 Protein of unknown function (DUF1282) - - - 0.000000000000000000000000000001614 127.0
YYD2_k127_5710869_16 - - - - 0.000000000000000000000002761 113.0
YYD2_k127_5710869_17 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000000008215 89.0
YYD2_k127_5710869_18 von Willebrand factor (vWF) type A domain - - - 0.0000000000000002335 90.0
YYD2_k127_5710869_19 Methyltransferase domain - - - 0.000000000001899 77.0
YYD2_k127_5710869_2 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 546.0
YYD2_k127_5710869_20 Glycosyl transferase family 41 - - - 0.00000002682 66.0
YYD2_k127_5710869_3 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007393 527.0
YYD2_k127_5710869_4 beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004345 422.0
YYD2_k127_5710869_5 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004351 394.0
YYD2_k127_5710869_6 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 360.0
YYD2_k127_5710869_7 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 335.0
YYD2_k127_5710869_8 transmembrane transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005135 323.0
YYD2_k127_5710869_9 Cytochrome c K08685 - 1.4.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005483 295.0
YYD2_k127_571119_0 dTDP biosynthetic process K00560,K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.1.1.45,2.7.4.9,4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 302.0
YYD2_k127_571119_1 dTDP biosynthetic process K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.9,4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000001022 265.0
YYD2_k127_571119_2 ABC transporter transmembrane region K11085 - - 0.0000000000002157 74.0
YYD2_k127_5715740_0 Alpha amylase, catalytic domain K00690,K05343 - 2.4.1.7,3.2.1.1,5.4.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 614.0
YYD2_k127_5715740_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009002 526.0
YYD2_k127_5715740_2 cytochrome C peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000001124 220.0
YYD2_k127_5715740_3 - - - - 0.000000002502 69.0
YYD2_k127_5725211_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1022.0
YYD2_k127_5725211_1 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005627 335.0
YYD2_k127_5725211_2 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.0000000000000000000005809 108.0
YYD2_k127_5725211_3 - - - - 0.00000000000000001401 89.0
YYD2_k127_5727120_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000276 235.0
YYD2_k127_5727120_1 - - - - 0.0000003198 59.0
YYD2_k127_5729507_0 DNA topological change K03168 - 5.99.1.2 3.778e-207 673.0
YYD2_k127_5729507_1 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009847 547.0
YYD2_k127_5729507_2 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000002117 221.0
YYD2_k127_5730_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 456.0
YYD2_k127_5730_1 PFAM Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002349 280.0
YYD2_k127_5730_2 - - - - 0.00000000000000000000000000000000000000000000000004145 184.0
YYD2_k127_5730_3 SMART Signal transduction response regulator, receiver domain - - - 0.000000000000000000000000000000000000004871 160.0
YYD2_k127_5741144_0 High confidence in function and specificity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 301.0
YYD2_k127_5741144_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.00000000000000000000000002467 111.0
YYD2_k127_5741144_2 Transposase K07494 - - 0.00000000000000000002895 99.0
YYD2_k127_5741144_3 23S rRNA-intervening sequence protein - - - 0.00000000000000000004094 94.0
YYD2_k127_5741144_4 Transposase and inactivated derivatives-like protein - - - 0.000000000000003433 86.0
YYD2_k127_5741144_5 Transposase - - - 0.000002774 52.0
YYD2_k127_5748044_0 membrane organization K07277,K09800 - - 0.0 1250.0
YYD2_k127_5748044_1 PBS lyase HEAT-like repeat - - - 3.636e-219 712.0
YYD2_k127_5748044_10 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 315.0
YYD2_k127_5748044_11 Methyltransferase, chemotaxis proteins K00575,K13486 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 308.0
YYD2_k127_5748044_12 electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007027 316.0
YYD2_k127_5748044_14 LVIVD repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 296.0
YYD2_k127_5748044_15 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001031 242.0
YYD2_k127_5748044_16 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000009155 238.0
YYD2_k127_5748044_17 - - - - 0.00000000000000000000000000000000000000000000000000000000000007297 225.0
YYD2_k127_5748044_18 CheC inhibitor of MCP methylation K03410 - - 0.00000000000000000000000000000000000000000000000000000002047 209.0
YYD2_k127_5748044_19 COG0346 Lactoylglutathione lyase and related lyases K07032 - - 0.0000000000000000000000000000000000000000000000003157 180.0
YYD2_k127_5748044_2 Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate K00451 - 1.13.11.5 5.502e-204 642.0
YYD2_k127_5748044_20 - - - - 0.00000000000000000000000000000000000000000000005106 175.0
YYD2_k127_5748044_21 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000006042 167.0
YYD2_k127_5748044_22 phosphorelay signal transduction system K03413 - - 0.0000000000000000000000000000000000000009621 151.0
YYD2_k127_5748044_23 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000004345 155.0
YYD2_k127_5748044_24 Response regulator receiver domain K03413 - - 0.0000000000000000000000000000000001554 137.0
YYD2_k127_5748044_25 Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma- L-glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine - - - 0.000000000000000000000000000000001635 138.0
YYD2_k127_5748044_26 - - - - 0.000000000000000000000000000002458 123.0
YYD2_k127_5748044_27 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000006845 93.0
YYD2_k127_5748044_3 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 599.0
YYD2_k127_5748044_4 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 591.0
YYD2_k127_5748044_5 Peptidase family M28 K01295 - 3.4.17.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002758 481.0
YYD2_k127_5748044_6 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 446.0
YYD2_k127_5748044_7 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 372.0
YYD2_k127_5748044_8 protein kinase activity K01972,K02342,K04096 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 2.7.7.7,6.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 352.0
YYD2_k127_5748044_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 326.0
YYD2_k127_5756946_0 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 549.0
YYD2_k127_5756946_1 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004151 503.0
YYD2_k127_5756946_10 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000005881 148.0
YYD2_k127_5756946_11 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000000002915 85.0
YYD2_k127_5756946_12 Putative adhesin - - - 0.00000000000000005089 94.0
YYD2_k127_5756946_13 deoxyhypusine monooxygenase activity - - - 0.00001529 58.0
YYD2_k127_5756946_15 shape-determining protein MreD K03571 - - 0.0000191 54.0
YYD2_k127_5756946_2 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007697 435.0
YYD2_k127_5756946_3 pyrimidine-nucleoside phosphorylase K00756,K00758 - 2.4.2.2,2.4.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007634 360.0
YYD2_k127_5756946_4 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 292.0
YYD2_k127_5756946_5 type I phosphodiesterase nucleotide pyrophosphatase - GO:0003674,GO:0003824,GO:0004035,GO:0004346,GO:0005488,GO:0005575,GO:0005623,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008877,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0046872,GO:0046914,GO:0050308,GO:0050309,GO:0098519 - 0.000000000000000000000000000000000000000000000000000000000000000000001094 256.0
YYD2_k127_5756946_6 PFAM metal-dependent phosphohydrolase HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000001873 222.0
YYD2_k127_5756946_7 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000001219 185.0
YYD2_k127_5756946_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000002852 166.0
YYD2_k127_5756946_9 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000002542 153.0
YYD2_k127_5757470_0 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008313 524.0
YYD2_k127_5757470_1 Mismatch repair ATPase (MutS family) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 492.0
YYD2_k127_5757470_2 COG0520 Selenocysteine lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 434.0
YYD2_k127_5757470_3 tryptophan 2,3-dioxygenase activity K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 353.0
YYD2_k127_5757470_4 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001118 262.0
YYD2_k127_5757470_5 23S rRNA-intervening sequence protein - - - 0.0000000000000000000001027 104.0
YYD2_k127_5757470_6 Cytochrome c - - - 0.000001141 55.0
YYD2_k127_5759754_0 POT family K03305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002737 457.0
YYD2_k127_5759754_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 430.0
YYD2_k127_5759754_10 tRNA cytidylyltransferase activity - - - 0.000001985 59.0
YYD2_k127_5759754_2 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000002161 214.0
YYD2_k127_5759754_3 Uncharacterised protein family UPF0052 - - - 0.00000000000000000000000000000000000000000000000000000000005822 218.0
YYD2_k127_5759754_4 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000006028 198.0
YYD2_k127_5759754_5 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000595 193.0
YYD2_k127_5759754_6 DinB family - - - 0.000000000000000000000000000000000000000004292 168.0
YYD2_k127_5759754_7 transcriptional regulator PadR family - - - 0.00000000000000000000000000000000000000001104 156.0
YYD2_k127_5759754_8 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.0000000000000000000000000000003442 135.0
YYD2_k127_5759754_9 - - - - 0.0000000000000001103 93.0
YYD2_k127_5760943_0 PQQ enzyme repeat K00117 - 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007377 570.0
YYD2_k127_5760943_1 Protein of unknown function (DUF1624) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 516.0
YYD2_k127_5760943_2 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006439 357.0
YYD2_k127_5760943_3 cytochrome - - - 0.00000000000000000000000000000000000000000000000000000000000000000536 237.0
YYD2_k127_5760943_4 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000461 240.0
YYD2_k127_5760943_5 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000000002734 203.0
YYD2_k127_5760943_6 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000001257 141.0
YYD2_k127_5760943_7 - - - - 0.000000000000000001062 94.0
YYD2_k127_5762322_0 Dehydrogenase K00117 - 1.1.5.2 2.949e-208 665.0
YYD2_k127_5762322_1 peroxiredoxin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 356.0
YYD2_k127_5763688_0 ASPIC and UnbV - - - 8.497e-267 871.0
YYD2_k127_5763688_1 Animal haem peroxidase - - - 2.114e-217 691.0
YYD2_k127_5763688_2 PQQ-like domain K05889 - 1.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006586 428.0
YYD2_k127_5763688_3 Copper binding periplasmic protein CusF K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008659 267.0
YYD2_k127_5763688_4 cytochrome C peroxidase - - - 0.0000000000000000000000000000006143 128.0
YYD2_k127_5763688_5 NADH flavin oxidoreductase NADH oxidase K00317 - 1.5.8.1,1.5.8.2 0.000001773 51.0
YYD2_k127_5772194_0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 1.834e-231 736.0
YYD2_k127_5772194_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 394.0
YYD2_k127_5772194_2 Domain of unknown function (DUF892) - - - 0.000000000000000000000000000000000000000000003975 170.0
YYD2_k127_5772194_3 Periplasmic or secreted lipoprotein - - - 0.000000000000003653 84.0
YYD2_k127_5772194_4 - - - - 0.000000000001044 73.0
YYD2_k127_5774821_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 466.0
YYD2_k127_5774821_1 M56 family peptidase - - - 0.00000000000000000000000000000000003243 153.0
YYD2_k127_5774821_2 Penicillinase repressor - - - 0.00000000000000000000000000000008477 128.0
YYD2_k127_5774821_3 Endoribonuclease L-PSP - - - 0.00000001438 63.0
YYD2_k127_5774821_4 Methylase involved in ubiquinone menaquinone biosynthesis K00568 - 2.1.1.222,2.1.1.64 0.0008097 47.0
YYD2_k127_5780938_0 ankyrin repeat K06867 - - 0.00000000000000000000000000003917 125.0
YYD2_k127_5780938_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000002669 122.0
YYD2_k127_5780938_2 Ankyrin repeat - - - 0.0000000000000000000000005214 118.0
YYD2_k127_5780938_3 PQQ-like domain - - - 0.00000000000000006393 87.0
YYD2_k127_5783649_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 4.8e-282 887.0
YYD2_k127_5783649_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 1.107e-232 761.0
YYD2_k127_5783649_10 PepSY-associated TM region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000983 247.0
YYD2_k127_5783649_11 ATPases associated with a variety of cellular activities K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000003496 221.0
YYD2_k127_5783649_12 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000001513 190.0
YYD2_k127_5783649_13 Binding-protein-dependent transport system inner membrane component K02011 - - 0.00000000000000000000000000000000000000000004269 181.0
YYD2_k127_5783649_14 lipoprotein biosynthetic process K13292 - - 0.00000000000000000000000000000000000000000009827 169.0
YYD2_k127_5783649_15 Outer membrane efflux protein K15725 - - 0.000000000000000000000000000000000000000254 164.0
YYD2_k127_5783649_17 Cytochrome C' - - - 0.000000000000000000000000000000000117 139.0
YYD2_k127_5783649_18 PFAM Carbohydrate-selective porin OprB - - - 0.0000000000000000000000000000000176 145.0
YYD2_k127_5783649_19 - - - - 0.000000000000000000000000000002379 135.0
YYD2_k127_5783649_2 Amino acid permease - - - 3.117e-207 662.0
YYD2_k127_5783649_20 TonB-dependent Receptor Plug K02014 - - 0.00000000000000000000000000003316 136.0
YYD2_k127_5783649_21 40-residue YVTN family beta-propeller repeat - - - 0.00000000000000000000000009853 121.0
YYD2_k127_5783649_22 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.00000000000002011 83.0
YYD2_k127_5783649_23 Cytochrome c K17760 - 1.1.9.1 0.000000001292 65.0
YYD2_k127_5783649_24 - - - - 0.00000002371 60.0
YYD2_k127_5783649_25 Protein of unknown function (DUF3891) - - - 0.0000007159 60.0
YYD2_k127_5783649_26 - - - - 0.0000009442 61.0
YYD2_k127_5783649_3 TonB dependent receptor - - - 2.764e-197 642.0
YYD2_k127_5783649_4 Belongs to the TPP enzyme family K01576,K01652 - 2.2.1.6,4.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 521.0
YYD2_k127_5783649_5 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 362.0
YYD2_k127_5783649_6 extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 338.0
YYD2_k127_5783649_7 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07239 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004803 292.0
YYD2_k127_5783649_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004982 303.0
YYD2_k127_5783649_9 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005922 283.0
YYD2_k127_5786259_0 COG0524 Sugar kinases, ribokinase family K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003997 405.0
YYD2_k127_5786259_1 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 387.0
YYD2_k127_5786259_2 GTPase activity K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 308.0
YYD2_k127_5786259_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000002718 248.0
YYD2_k127_5786259_4 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759,K05606 - 4.4.1.5,5.1.99.1 0.000000000000000000000000000000000006108 152.0
YYD2_k127_5794572_0 Monomeric isocitrate dehydrogenase K00031 - 1.1.1.42 0.0 1064.0
YYD2_k127_5794572_1 Lysin motif - - - 0.00000000000000000002244 97.0
YYD2_k127_5806370_0 DNA polymerase X K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009588 556.0
YYD2_k127_5806370_1 Mur ligase middle domain K02558 - 6.3.2.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004202 450.0
YYD2_k127_5806370_2 PFAM Allophanate hydrolase subunit 2 K06350 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006506 389.0
YYD2_k127_5806370_3 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008799 341.0
YYD2_k127_5806370_4 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006255 320.0
YYD2_k127_5806370_5 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643 317.0
YYD2_k127_5806370_6 GHMP kinases C terminal K07031 - 2.7.1.168 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007157 284.0
YYD2_k127_5806370_7 LD-carboxypeptidase K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000000001953 208.0
YYD2_k127_5806370_8 FR47-like protein K18816 - 2.3.1.82 0.0000000000000000000000001756 110.0
YYD2_k127_5816771_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007953 366.0
YYD2_k127_5816771_1 AAA ATPase K07478 - - 0.0000000000000000000000000000000000000000000000008976 177.0
YYD2_k127_581784_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000001754 182.0
YYD2_k127_581784_1 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000000000000000000000000000002614 147.0
YYD2_k127_581784_2 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000001914 128.0
YYD2_k127_5828004_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000003743 192.0
YYD2_k127_5830232_0 - - - - 4.785e-292 914.0
YYD2_k127_5830232_1 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003881 545.0
YYD2_k127_5830232_10 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000001799 229.0
YYD2_k127_5830232_11 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000177 234.0
YYD2_k127_5830232_12 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000845 199.0
YYD2_k127_5830232_13 Copper binding periplasmic protein CusF K07152 - - 0.0000000000000000000000000000000000000000000000000001647 196.0
YYD2_k127_5830232_14 - - - - 0.00000000000000000000000000000000000000000002571 170.0
YYD2_k127_5830232_15 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000005248 153.0
YYD2_k127_5830232_16 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000114 158.0
YYD2_k127_5830232_17 4Fe-4S dicluster domain K05524 - - 0.0000000000000000000000000000000000009482 143.0
YYD2_k127_5830232_18 GAF domain - - - 0.000000000000000000000000000000000005623 156.0
YYD2_k127_5830232_19 Lipase (class 3) K01046 - 3.1.1.3 0.00000000000000000000000000000000004646 147.0
YYD2_k127_5830232_2 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 544.0
YYD2_k127_5830232_20 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000001686 149.0
YYD2_k127_5830232_21 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000002266 149.0
YYD2_k127_5830232_22 cell redox homeostasis K02199 - - 0.00000000000000000000000000000296 131.0
YYD2_k127_5830232_23 - - - - 0.000000000000002085 89.0
YYD2_k127_5830232_24 - - - - 0.00000000000004881 75.0
YYD2_k127_5830232_25 Metallo-beta-lactamase superfamily - - - 0.00000000000007101 74.0
YYD2_k127_5830232_26 cytochrome c - - - 0.0000000000006958 75.0
YYD2_k127_5830232_27 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000002031 71.0
YYD2_k127_5830232_28 gag-polyprotein putative aspartyl protease - - - 0.00004871 56.0
YYD2_k127_5830232_29 Putative zinc-finger - - - 0.0001065 53.0
YYD2_k127_5830232_3 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008792 437.0
YYD2_k127_5830232_4 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 382.0
YYD2_k127_5830232_5 InterPro IPR010496 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 321.0
YYD2_k127_5830232_6 poly(3-hydroxybutyrate) depolymerase activity K07019 GO:0003674,GO:0003824,GO:0006629,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0044237,GO:0044238,GO:0044255,GO:0071704 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 295.0
YYD2_k127_5830232_7 Belongs to the UPF0173 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001046 283.0
YYD2_k127_5830232_8 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000004104 271.0
YYD2_k127_5830232_9 ATPase activity K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002418 249.0
YYD2_k127_5840532_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1197.0
YYD2_k127_5840532_1 Chase2 domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003976 400.0
YYD2_k127_5840532_10 Helix-turn-helix domain - - - 0.00003749 51.0
YYD2_k127_5840532_2 Biotin-lipoyl like K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 332.0
YYD2_k127_5840532_3 Oxidoreductase molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007748 265.0
YYD2_k127_5840532_4 BAAT / Acyl-CoA thioester hydrolase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000004885 233.0
YYD2_k127_5840532_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000003759 151.0
YYD2_k127_5840532_6 OmpA family - - - 0.0000000000000000000000000000000039 137.0
YYD2_k127_5840532_7 FecR protein - - - 0.000000000000000000000000000002894 124.0
YYD2_k127_5840532_8 DinB family - - - 0.000000000000000000002268 100.0
YYD2_k127_5840532_9 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000791 89.0
YYD2_k127_5858857_0 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005587 455.0
YYD2_k127_5858857_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 349.0
YYD2_k127_5858857_2 PFAM FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004941 325.0
YYD2_k127_5858857_3 AhpC/TSA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005205 265.0
YYD2_k127_5858857_4 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000001259 205.0
YYD2_k127_5859683_0 Sulfate permease family K03321 - - 2.207e-202 645.0
YYD2_k127_5859683_1 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008897 582.0
YYD2_k127_5859683_10 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.0000000000000000000000000000000000000002735 168.0
YYD2_k127_5859683_11 - - - - 0.000000000000000000000000000000000009397 153.0
YYD2_k127_5859683_12 - - - - 0.000000000000000000000000002976 116.0
YYD2_k127_5859683_13 - - - - 0.00000000000000000000000001096 121.0
YYD2_k127_5859683_14 - - - - 0.0000000000000000000000006452 112.0
YYD2_k127_5859683_15 SET domain K07117 - - 0.0000000000000000000003027 103.0
YYD2_k127_5859683_17 - - - - 0.00000000000000000002269 98.0
YYD2_k127_5859683_18 Surface antigen - - - 0.000000000000000008195 96.0
YYD2_k127_5859683_19 - - - - 0.0000000000000005892 87.0
YYD2_k127_5859683_2 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 413.0
YYD2_k127_5859683_20 Domain of unknown function (DUF4956) - - - 0.00000000000001306 85.0
YYD2_k127_5859683_3 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 378.0
YYD2_k127_5859683_4 transport protein CorA K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006832 347.0
YYD2_k127_5859683_5 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 336.0
YYD2_k127_5859683_6 PLD-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003805 271.0
YYD2_k127_5859683_7 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000004682 237.0
YYD2_k127_5859683_8 - - - - 0.00000000000000000000000000000000000000000005994 169.0
YYD2_k127_5859683_9 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000000322 176.0
YYD2_k127_5867191_0 alpha amylase, catalytic region - - - 8.094e-246 775.0
YYD2_k127_5867191_1 Phosphate acetyl/butaryl transferase K00625 - 2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 446.0
YYD2_k127_5867191_2 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 399.0
YYD2_k127_5867191_3 Histidine kinase K07683 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009684 302.0
YYD2_k127_5867191_4 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002471 278.0
YYD2_k127_5867191_5 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000001387 218.0
YYD2_k127_5867191_6 response regulator K02282 - - 0.0000000000000000000001473 102.0
YYD2_k127_5908320_0 MatE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007321 556.0
YYD2_k127_5908320_1 Aldo Keto reductase K01939,K03273,K05275 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 1.1.1.65,3.1.3.82,3.1.3.83,6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000008195 235.0
YYD2_k127_5908320_2 - - - - 0.000000000000000000000000000000004992 149.0
YYD2_k127_5908320_3 23S rRNA-intervening sequence protein - - - 0.00000000000000000000004563 102.0
YYD2_k127_5908320_4 Major Facilitator Superfamily - - - 0.000000000000142 82.0
YYD2_k127_5911996_0 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009938 503.0
YYD2_k127_5911996_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 310.0
YYD2_k127_5911996_2 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000098,GO:0000166,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009087,GO:0009116,GO:0009119,GO:0009987,GO:0016020,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0019899,GO:0022610,GO:0030260,GO:0030312,GO:0033353,GO:0034641,GO:0035375,GO:0035635,GO:0036094,GO:0040007,GO:0042278,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044403,GO:0044406,GO:0044409,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0044650,GO:0046085,GO:0046128,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0048037,GO:0050662,GO:0051186,GO:0051287,GO:0051701,GO:0051704,GO:0051806,GO:0051828,GO:0055086,GO:0070403,GO:0071704,GO:0071944,GO:0072521,GO:0097159,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901657 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000001267 208.0
YYD2_k127_5921130_0 Acetyl-coenzyme A synthetase N-terminus K01895 - 6.2.1.1 2.294e-303 947.0
YYD2_k127_5921130_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 1.145e-231 728.0
YYD2_k127_5921130_10 Calcineurin-like phosphoesterase K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 295.0
YYD2_k127_5921130_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001294 267.0
YYD2_k127_5921130_12 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000008683 239.0
YYD2_k127_5921130_13 Spore coat protein CotH - - - 0.000000000000000000000000000000000000000000000000000000000000000001621 244.0
YYD2_k127_5921130_14 PLD-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000003813 226.0
YYD2_k127_5921130_15 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000000000000000000001136 194.0
YYD2_k127_5921130_16 phosphate-selective porin O and P K07221 - - 0.00000000000000000000000000000000000000000001599 179.0
YYD2_k127_5921130_17 - - - - 0.0000000000000000000000000000000000000000004035 171.0
YYD2_k127_5921130_18 - - - - 0.00000000000000000000000000000000000000004818 156.0
YYD2_k127_5921130_19 Bacterial extracellular solute-binding protein K02020,K22003 - 5.3.3.7 0.0000000000000000000000000000000000408 148.0
YYD2_k127_5921130_2 N-acetyldiaminopimelate deacetylase activity K12941 - - 1.537e-229 722.0
YYD2_k127_5921130_20 dTDP biosynthetic process K00560,K00943 - 2.1.1.45,2.7.4.9 0.000000000000000000000000003135 121.0
YYD2_k127_5921130_21 - - - - 0.0000000000000000000000008697 117.0
YYD2_k127_5921130_22 Protein of unknown function, DUF485 - - - 0.0000000000000000000001523 100.0
YYD2_k127_5921130_23 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.00000000000002204 75.0
YYD2_k127_5921130_24 Domain of unknown function (DUF4956) - - - 0.00000000000003078 85.0
YYD2_k127_5921130_25 Carboxylesterase family K03929 - - 0.000000000002846 72.0
YYD2_k127_5921130_26 Glycosyl hydrolases family 18 K01183 - 3.2.1.14 0.0005 48.0
YYD2_k127_5921130_3 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 4.39e-199 653.0
YYD2_k127_5921130_4 PQQ enzyme repeat K00117 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005116 618.0
YYD2_k127_5921130_5 PQQ-like domain K00117 - 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004198 595.0
YYD2_k127_5921130_6 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006116 403.0
YYD2_k127_5921130_7 peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 375.0
YYD2_k127_5921130_8 dTDP biosynthetic process K00560,K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.1.1.45,2.7.4.9,4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 347.0
YYD2_k127_5921130_9 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005375 332.0
YYD2_k127_5921190_0 Methionine synthase K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005924 462.0
YYD2_k127_5921190_1 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000005855 224.0
YYD2_k127_5921190_2 PFAM TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000001389 141.0
YYD2_k127_5921190_3 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000001257 108.0
YYD2_k127_59220_0 type VI secretion protein K11900 - - 6.876e-289 892.0
YYD2_k127_59220_1 type VI secretion-associated protein, BMA_A0400 family K11890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008388 320.0
YYD2_k127_59220_2 Type VI secretion system, VipA, VC_A0107 or Hcp2 K11901 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 297.0
YYD2_k127_59220_3 ImpE protein K11898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006167 306.0
YYD2_k127_59220_4 ImpA, N-terminal, type VI secretion system K11902 - - 0.00000000000000000000000000000000000000000000000005143 191.0
YYD2_k127_59220_5 type VI secretion protein K11891 - - 0.00000000000000000000000000000000000000000000000005946 189.0
YYD2_k127_59220_6 Type VI secretion system effector, Hcp K11903 - - 0.000000000000000000000000000000000000000000001843 169.0
YYD2_k127_59220_7 Type VI secretion system effector, Hcp K11903 - - 0.000000000000000000000000000000002475 134.0
YYD2_k127_5925527_0 Pyrrolo-quinoline quinone K00114 - 1.1.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 462.0
YYD2_k127_5925527_1 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000002228 244.0
YYD2_k127_5928692_0 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 374.0
YYD2_k127_5928692_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001846 249.0
YYD2_k127_5928692_2 PFAM Methionine synthase, vitamin-B12 independent K00549 - 2.1.1.14 0.000000000000000000000000000000000009601 149.0
YYD2_k127_5931741_0 protein kinase activity - - - 1.341e-231 748.0
YYD2_k127_5931741_1 Response regulator receiver - - - 9.623e-199 628.0
YYD2_k127_5931741_10 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000005443 239.0
YYD2_k127_5931741_11 TRAP transporter T-component - - - 0.0000000000000000000000000000000000000000000000000000000000416 216.0
YYD2_k127_5931741_12 PFAM TRAP dicarboxylate transporter- DctP subunit - - - 0.000000000000000000000000000000000000000000000000000000005311 211.0
YYD2_k127_5931741_13 DNA-templated transcription, initiation K03088 - - 0.00000000002238 65.0
YYD2_k127_5931741_2 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 515.0
YYD2_k127_5931741_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005783 483.0
YYD2_k127_5931741_4 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 483.0
YYD2_k127_5931741_5 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 442.0
YYD2_k127_5931741_6 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 429.0
YYD2_k127_5931741_7 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004036 338.0
YYD2_k127_5931741_8 Polyphosphate kinase 2 (PPK2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 321.0
YYD2_k127_5931741_9 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003952 283.0
YYD2_k127_5937527_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 1.846e-218 714.0
YYD2_k127_5937527_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 595.0
YYD2_k127_5937527_10 TIM-barrel fold metal-dependent hydrolase - - - 0.00000000000000000000003144 102.0
YYD2_k127_5937527_11 PGAP1-like protein - - - 0.000001338 61.0
YYD2_k127_5937527_2 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005445 433.0
YYD2_k127_5937527_3 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 380.0
YYD2_k127_5937527_4 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009913 397.0
YYD2_k127_5937527_5 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.00000000000000000000000000000000000000000000000006541 190.0
YYD2_k127_5937527_6 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000001099 145.0
YYD2_k127_5937527_7 - K01286 - 3.4.16.4 0.0000000000000000000000000000000001707 148.0
YYD2_k127_5937527_8 PFAM lipase class 3 - - - 0.00000000000000000000000000009326 131.0
YYD2_k127_5937527_9 Penicillinase repressor - - - 0.000000000000000000000000002371 115.0
YYD2_k127_5939936_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 1.871e-265 831.0
YYD2_k127_5939936_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000329 431.0
YYD2_k127_5939936_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006206 282.0
YYD2_k127_5939936_3 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004953 255.0
YYD2_k127_5939936_4 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000002542 145.0
YYD2_k127_5939936_5 - - - - 0.000000000000000007279 90.0
YYD2_k127_5940762_0 Adventurous gliding motility - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 306.0
YYD2_k127_5940762_1 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003579 313.0
YYD2_k127_5940762_2 Biopolymer transport protein ExbD/TolR - - - 0.0000000000000000000000000000000000000000000000008785 179.0
YYD2_k127_5940762_3 Biopolymer transport protein ExbD/TolR - - - 0.0000000000000000000000000000000000000001428 157.0
YYD2_k127_5940762_5 deoxyhypusine monooxygenase activity - - - 0.0000000000000000005619 96.0
YYD2_k127_5940762_6 haloacid dehalogenase-like hydrolase - - - 0.0000002158 56.0
YYD2_k127_5943769_0 Pirin K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007337 290.0
YYD2_k127_5943769_1 Bacterial transcription activator, effector binding domain K13652 - - 0.000000000000000000000000000000000000000000000000000000000000000009803 235.0
YYD2_k127_5943769_2 Penicillinase repressor - - - 0.000000000000000000000000000000000000000000007397 166.0
YYD2_k127_5943769_3 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000001393 176.0
YYD2_k127_5943769_4 4'-phosphopantetheinyl transferase superfamily K06133 - - 0.000000000000000000000000000000000000000009982 162.0
YYD2_k127_5943769_5 - - - - 0.00000000000000000000000000000000000000003833 156.0
YYD2_k127_5943769_6 NAD(P)H dehydrogenase (quinone) activity K03809 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 1.6.5.2 0.00000000000000000005534 96.0
YYD2_k127_5943769_7 - - - - 0.00000000000000001905 90.0
YYD2_k127_5943769_9 Carboxypeptidase regulatory-like domain - - - 0.000000099 62.0
YYD2_k127_5950241_0 amine dehydrogenase activity - - - 3.439e-246 797.0
YYD2_k127_5950241_1 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004651 323.0
YYD2_k127_5950241_2 - - - - 0.0000000000000000000000000000000000001967 154.0
YYD2_k127_5950241_3 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000004901 128.0
YYD2_k127_5950241_4 Protease prsW family - - - 0.0000000000000000000000000004093 126.0
YYD2_k127_5950241_5 Domain of unknown function (DUF1330) - - - 0.0000000000003203 74.0
YYD2_k127_5950241_6 - - - - 0.000000007851 66.0
YYD2_k127_5950241_7 - - - - 0.00000002378 64.0
YYD2_k127_5950241_8 STAS domain K06378 - - 0.00000162 55.0
YYD2_k127_5950241_9 - - - - 0.000002322 53.0
YYD2_k127_5955499_0 alginic acid biosynthetic process K01729 - 4.2.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 589.0
YYD2_k127_5955499_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008694 344.0
YYD2_k127_5955499_2 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 357.0
YYD2_k127_5955499_3 cytochrome K17230 - - 0.000000000000000000000000000000000000000000000000000000000000000000004843 247.0
YYD2_k127_5955499_4 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000007055 224.0
YYD2_k127_5955499_5 pilus organization - - - 0.0000000000000000000000000003445 133.0
YYD2_k127_5955499_6 - - - - 0.000000000000000000175 100.0
YYD2_k127_5955499_7 Transcriptional regulatory protein, C terminal - - - 0.000000000000000001304 100.0
YYD2_k127_5955499_8 - - - - 0.00000000002129 70.0
YYD2_k127_5955499_9 COG0457 FOG TPR repeat - - - 0.0009634 51.0
YYD2_k127_5963248_0 amine dehydrogenase activity K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 314.0
YYD2_k127_5963248_1 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008147 314.0
YYD2_k127_5963248_2 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000000000000000000000000000000002 155.0
YYD2_k127_5963248_3 Methyltransferase type 11 - - - 0.0000000000000000000000000002421 124.0
YYD2_k127_596693_0 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 621.0
YYD2_k127_5969564_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 635.0
YYD2_k127_5969564_1 Dehydrogenase K00114 - 1.1.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006914 578.0
YYD2_k127_5969564_2 ankyrin repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009948 353.0
YYD2_k127_5969564_3 Sugar (and other) transporter K08195 - - 0.000000000000000000000000000000000000000000002863 170.0
YYD2_k127_5969564_4 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000001407 129.0
YYD2_k127_5969564_5 Transposase - - - 0.00004554 52.0
YYD2_k127_5978103_0 DNA topological change K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 477.0
YYD2_k127_5978103_1 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 461.0
YYD2_k127_5978103_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000038 176.0
YYD2_k127_5978103_3 histone H2A-K13 ubiquitination K01338,K07157 - 3.4.21.53 0.000000000000000000000000000000003748 136.0
YYD2_k127_5978103_5 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.00000000000000000001736 104.0
YYD2_k127_5978103_6 Protein of unknown function (DUF1573) - - - 0.000000000002728 78.0
YYD2_k127_5978103_7 Protein kinase domain K12132 - 2.7.11.1 0.0000002264 61.0
YYD2_k127_5978103_8 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000274 55.0
YYD2_k127_5978103_9 PEGA domain - - - 0.00003236 55.0
YYD2_k127_5980162_0 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 624.0
YYD2_k127_5980162_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 516.0
YYD2_k127_5980162_2 PQQ-like domain K00114 - 1.1.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 379.0
YYD2_k127_5980162_3 Protein of unknown function (DUF3565) - - - 0.00000000000000000001401 91.0
YYD2_k127_5994476_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005128 268.0
YYD2_k127_5994476_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00001929 51.0
YYD2_k127_6000873_0 COG0553 Superfamily II DNA RNA helicases, SNF2 family - - - 0.00000000000000000000000000000000000000000000000000000000005677 231.0
YYD2_k127_6000873_1 N-6 DNA Methylase - - - 0.000000000000000000000000000000000000000000000000000003951 212.0
YYD2_k127_6000873_2 Smr domain - - - 0.0000000000000000000158 96.0
YYD2_k127_6000873_3 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000179 76.0
YYD2_k127_6018193_0 Dehydrogenase K00117 - 1.1.5.2 1.497e-248 788.0
YYD2_k127_6018193_1 Peptidase family M49 - - - 8.457e-234 737.0
YYD2_k127_6018193_2 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 552.0
YYD2_k127_6018193_3 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000006049 122.0
YYD2_k127_601908_0 TonB dependent receptor - - - 3.469e-198 653.0
YYD2_k127_601908_1 Molybdopterin oxidoreductase Fe4S4 domain K08357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000516 527.0
YYD2_k127_601908_10 - - - - 0.000005096 55.0
YYD2_k127_601908_2 PFAM alpha beta hydrolase fold K01561 - 3.8.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 363.0
YYD2_k127_601908_3 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 354.0
YYD2_k127_601908_4 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000001061 144.0
YYD2_k127_601908_5 - - - - 0.00000000000000000008105 95.0
YYD2_k127_601908_6 SnoaL-like domain - - - 0.0000000000000001686 86.0
YYD2_k127_601908_7 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000003626 84.0
YYD2_k127_601908_8 - - - - 0.0000000000001691 78.0
YYD2_k127_601908_9 PepSY-associated TM region - - - 0.000000000000445 80.0
YYD2_k127_6022663_0 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009707 608.0
YYD2_k127_6022663_1 phosphoprotein phosphatase activity K14680 - 6.5.1.3 0.000000000000000000309 91.0
YYD2_k127_6026410_0 Sigma factor PP2C-like phosphatases - - - 4.4e-323 1030.0
YYD2_k127_6026410_1 Cobaltochelatase CobS subunit N terminal K09882 - 6.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004308 478.0
YYD2_k127_6026410_10 TipAS antibiotic-recognition domain - - - 0.0000000003878 70.0
YYD2_k127_6026410_11 Glyoxalase-like domain - - - 0.0000003822 57.0
YYD2_k127_6026410_12 - - - - 0.00002557 46.0
YYD2_k127_6026410_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009743 344.0
YYD2_k127_6026410_3 Protein of unknown function (DUF2950) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001261 276.0
YYD2_k127_6026410_4 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit - - - 0.0000000000000000000000000000000000000000000000000000003731 205.0
YYD2_k127_6026410_5 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.000000000000000000000000000000000000000000000000007675 207.0
YYD2_k127_6026410_6 Acyltransferase family - - - 0.000000000000000000000000000000000000000000001275 180.0
YYD2_k127_6026410_7 Protein of unknown function (DUF3300) - - - 0.00000000000000000000000000000000000000001835 168.0
YYD2_k127_6026410_8 - - - - 0.00000000000000000000000001527 116.0
YYD2_k127_6026410_9 Periplasmic or secreted lipoprotein - - - 0.00000000000000000000000003108 118.0
YYD2_k127_6028716_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005399 512.0
YYD2_k127_6028716_1 Belongs to the TPP enzyme family K01576 - 4.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 333.0
YYD2_k127_6028716_2 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 321.0
YYD2_k127_6028716_3 Domain of unknown function (DUF2383) - - - 0.0000000000000000000000000008058 117.0
YYD2_k127_6028716_4 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000426 57.0
YYD2_k127_6028771_0 DNA topological change K03168 - 5.99.1.2 8.447e-246 785.0
YYD2_k127_6028771_1 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 377.0
YYD2_k127_6028771_2 Regulatory protein, FmdB family - - - 0.0000001733 57.0
YYD2_k127_6028771_3 Ankyrin repeat - - - 0.0000002656 58.0
YYD2_k127_6028771_4 SnoaL-like domain - - - 0.000009139 55.0
YYD2_k127_6030954_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. K01768 - 4.6.1.1 0.000000000000000000000000000003844 123.0
YYD2_k127_6030954_1 PFAM sigma-54 factor interaction domain-containing protein K10941 - - 0.000000000002195 79.0
YYD2_k127_6030954_2 PFAM adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000006553 71.0
YYD2_k127_60313_0 VWA-like domain (DUF2201) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008295 270.0
YYD2_k127_60313_1 - - - - 0.000000000000000000000000000000000000000000000000000000000002712 214.0
YYD2_k127_60313_2 - - - - 0.0000000000000000000000000259 121.0
YYD2_k127_60313_3 Periplasmic binding protein K02016 - - 0.00000000000000001875 86.0
YYD2_k127_60313_4 Periplasmic component of the Tol biopolymer transport system - - - 0.00000000000936 73.0
YYD2_k127_60313_5 Glycosyl transferase family 2 - - - 0.000000004314 67.0
YYD2_k127_6038315_0 Peptidase M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 500.0
YYD2_k127_6038315_1 - - - - 0.00000000000000000000653 94.0
YYD2_k127_6038315_2 Insulinase (Peptidase family M16) K07263 - - 0.00000000000003965 76.0
YYD2_k127_6038315_3 structural constituent of ribosome K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.00007884 45.0
YYD2_k127_6039582_0 Short chain fatty acid transporter K02106 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 500.0
YYD2_k127_6039582_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003737 497.0
YYD2_k127_6039582_10 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000000000000000001333 186.0
YYD2_k127_6039582_11 Glycosyl transferase, family 9 K02843,K02849 - - 0.00000000000000000000000000000000000000000000000008233 190.0
YYD2_k127_6039582_12 binds to the 23S rRNA K02939 - - 0.00000000000000000000000000000000000000002455 156.0
YYD2_k127_6039582_13 Tetratricopeptide repeat K11935 - - 0.0000000000000000000000000000000264 145.0
YYD2_k127_6039582_14 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000000000002969 117.0
YYD2_k127_6039582_15 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000001447 103.0
YYD2_k127_6039582_16 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000000133 100.0
YYD2_k127_6039582_17 TIGRFAM TonB family protein K03832 - - 0.000000000000000003072 93.0
YYD2_k127_6039582_18 Trm112p-like protein K00912,K09791 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.7.1.130 0.0000000000000423 84.0
YYD2_k127_6039582_19 Methyltransferase domain - - - 0.00005893 55.0
YYD2_k127_6039582_2 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004063 402.0
YYD2_k127_6039582_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 401.0
YYD2_k127_6039582_4 Zinc dependent phospholipase C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005354 385.0
YYD2_k127_6039582_5 Glutamine cyclotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 299.0
YYD2_k127_6039582_6 Phosphomethylpyrimidine kinase K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000006531 228.0
YYD2_k127_6039582_7 O-Antigen ligase K18814 - - 0.000000000000000000000000000000000000000000000000000001816 207.0
YYD2_k127_6039582_8 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000001325 196.0
YYD2_k127_6039582_9 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000000004074 201.0
YYD2_k127_6049711_0 GHKL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001142 285.0
YYD2_k127_6049711_1 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000002155 227.0
YYD2_k127_6049711_2 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.00000000000000000000000000000000000002392 152.0
YYD2_k127_6049711_3 Epoxide hydrolase N terminus - - - 0.0007563 44.0
YYD2_k127_6054391_0 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000003137 184.0
YYD2_k127_6056588_0 MacB-like periplasmic core domain - - - 0.0 1233.0
YYD2_k127_6056588_1 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 362.0
YYD2_k127_6056588_2 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 348.0
YYD2_k127_6056588_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001006 246.0
YYD2_k127_6056588_4 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000001865 205.0
YYD2_k127_6056588_5 transcriptional regulator PadR family - - - 0.000000000000000000000000000000000000000000000001905 175.0
YYD2_k127_6058573_0 Bacterial regulatory proteins, tetR family K16137 - - 0.000000000000000000000000000000000000188 147.0
YYD2_k127_6058573_1 SnoaL-like domain - - - 0.000000000000003558 78.0
YYD2_k127_6058573_2 - - - - 0.0003596 49.0
YYD2_k127_606144_0 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 595.0
YYD2_k127_606144_1 Belongs to the amidase family K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 528.0
YYD2_k127_606144_10 solute binding protein K02035 - - 0.00002377 55.0
YYD2_k127_606144_2 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 503.0
YYD2_k127_606144_3 serine-type peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 410.0
YYD2_k127_606144_4 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 386.0
YYD2_k127_606144_5 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008062 333.0
YYD2_k127_606144_6 Belongs to the glutaminase family K01425 - 3.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 283.0
YYD2_k127_606144_7 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000003531 227.0
YYD2_k127_606144_8 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000002745 231.0
YYD2_k127_606144_9 Two component transcriptional regulator, winged helix family K02483 - - 0.000000000000000000000000000000000000000000000000000000003827 209.0
YYD2_k127_6063412_0 Dehydrogenase K00117 - 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009937 471.0
YYD2_k127_6063412_1 Domain of unknown function (DUF5122) beta-propeller - - - 0.00000000000000000000000000000000000000000000000000003746 203.0
YYD2_k127_607064_0 Spermine/spermidine synthase domain - - - 5.977e-261 827.0
YYD2_k127_607064_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 421.0
YYD2_k127_607064_2 PFAM response regulator receiver K02483,K07658,K07668 - - 0.00000000000000000000000000000000000000000000000000001976 198.0
YYD2_k127_607064_3 PFAM Diacylglycerol kinase catalytic domain - - - 0.0000000007493 62.0
YYD2_k127_6072198_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 491.0
YYD2_k127_6078537_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 - 6.1.1.17,6.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 486.0
YYD2_k127_6078537_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007428 479.0
YYD2_k127_6078537_2 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 381.0
YYD2_k127_6078537_3 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007225 321.0
YYD2_k127_6078537_4 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000008758 215.0
YYD2_k127_6078537_5 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000186 181.0
YYD2_k127_6078537_6 B3/4 domain - - - 0.0000000000000000000000000000000000152 145.0
YYD2_k127_6078537_7 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000004064 83.0
YYD2_k127_6078537_9 - - - - 0.000009839 48.0
YYD2_k127_6081854_0 Histidine kinase K20974 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 300.0
YYD2_k127_6081854_1 Domain of unknown function (DUF4010) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003051 272.0
YYD2_k127_6081854_2 - - - - 0.0000000000000000000000000000004335 131.0
YYD2_k127_6081854_3 - - - - 0.0000000000000000001148 95.0
YYD2_k127_6081854_4 Domain of unknown function (DUF4136) - - - 0.00000000000000005899 89.0
YYD2_k127_6081854_5 Domain of unknown function (DUF4136) - - - 0.00000000000000006191 88.0
YYD2_k127_6093970_0 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004126 334.0
YYD2_k127_6093970_1 PFAM phosphoesterase, PA-phosphatase related - - - 0.00000000003106 72.0
YYD2_k127_6093970_2 CsbD-like - - - 0.000008012 50.0
YYD2_k127_6099087_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 399.0
YYD2_k127_6099087_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000007104 215.0
YYD2_k127_6099087_2 - - - - 0.000000000000000000000000000002 132.0
YYD2_k127_6099087_3 Tetratricopeptide repeats K08282,K12132 - 2.7.11.1 0.00005491 55.0
YYD2_k127_6105003_0 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 1.186e-266 836.0
YYD2_k127_6105003_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 524.0
YYD2_k127_6105003_10 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 336.0
YYD2_k127_6105003_11 SpoIVB peptidase S55 K00973,K02414,K21449 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 342.0
YYD2_k127_6105003_12 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 297.0
YYD2_k127_6105003_13 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006497 297.0
YYD2_k127_6105003_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002251 278.0
YYD2_k127_6105003_15 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000009383 271.0
YYD2_k127_6105003_16 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 - 1.1.1.25,4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000001426 273.0
YYD2_k127_6105003_17 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000002528 250.0
YYD2_k127_6105003_18 dithiol-disulfide isomerase involved in polyketide biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000001291 247.0
YYD2_k127_6105003_19 - - - - 0.000000000000000000000000000000000000000000000000000000000000000169 230.0
YYD2_k127_6105003_2 alginic acid biosynthetic process K01729 - 4.2.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009227 513.0
YYD2_k127_6105003_20 Indole-3-glycerol phosphate synthase K01609 GO:0000162,GO:0000287,GO:0003674,GO:0003824,GO:0004425,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016020,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043167,GO:0043169,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046219,GO:0046391,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0071944,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000001163 229.0
YYD2_k127_6105003_21 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000001835 205.0
YYD2_k127_6105003_22 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000001206 172.0
YYD2_k127_6105003_23 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000001316 169.0
YYD2_k127_6105003_24 May be involved in cell division - - - 0.000000000000000000000000000000000000001036 157.0
YYD2_k127_6105003_26 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000001125 132.0
YYD2_k127_6105003_27 Chorismate mutase type II K03856,K04092,K04093,K04516,K13853 - 2.5.1.54,5.4.99.5 0.0000000000000000006716 94.0
YYD2_k127_6105003_28 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10126 - - 0.0000000000328 64.0
YYD2_k127_6105003_29 PFAM Tetratricopeptide repeat - - - 0.0000000135 66.0
YYD2_k127_6105003_3 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 504.0
YYD2_k127_6105003_30 PIN domain - - - 0.00000004649 61.0
YYD2_k127_6105003_31 Putative zinc-finger - - - 0.000001051 60.0
YYD2_k127_6105003_32 - - - - 0.00000265 59.0
YYD2_k127_6105003_4 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008686 461.0
YYD2_k127_6105003_5 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 449.0
YYD2_k127_6105003_6 beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 418.0
YYD2_k127_6105003_7 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005301 398.0
YYD2_k127_6105003_8 nitrogen compound transport K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 367.0
YYD2_k127_6105003_9 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007968 347.0
YYD2_k127_6125504_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 535.0
YYD2_k127_6125504_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000001542 209.0
YYD2_k127_6137699_0 Amidohydrolase K10220 - 4.2.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007446 442.0
YYD2_k127_6137699_1 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 396.0
YYD2_k127_6137699_2 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000000000000000004601 126.0
YYD2_k127_6137699_3 NMT1-like family K02051 - - 0.000000001268 71.0
YYD2_k127_6137909_0 PFAM ATPase associated with various cellular activities, AAA_5 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 361.0
YYD2_k127_6137909_1 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000000000000000000003405 173.0
YYD2_k127_6137909_2 Protein of unknown function (DUF1697) - - - 0.000000000000000000000000000000000002895 151.0
YYD2_k127_6137909_3 Domain of unknown function (DUF4139) - - - 0.0000000000003084 75.0
YYD2_k127_6137909_4 Carboxypeptidase regulatory-like domain - - - 0.0000000939 64.0
YYD2_k127_6137909_5 Protein of unknown function (DUF1697) - - - 0.00008498 53.0
YYD2_k127_6161063_0 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000005748 257.0
YYD2_k127_6161063_1 HWE histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000008506 250.0
YYD2_k127_6161063_2 response regulator - - - 0.000000000000000000000000000000000000000000000000001437 189.0
YYD2_k127_6161063_3 PFAM Response regulator receiver domain - - - 0.0000000000000000000676 93.0
YYD2_k127_6161063_4 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000005922 64.0
YYD2_k127_6173763_0 MacB-like periplasmic core domain - - - 0.0 1063.0
YYD2_k127_6173763_1 TonB-dependent Receptor Plug K02014 - - 0.0 1015.0
YYD2_k127_6173763_10 protein serine/threonine phosphatase activity K01090,K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000233 198.0
YYD2_k127_6173763_11 2OG-Fe(II) oxygenase superfamily - - - 0.00000000000000000000000000000000000000000000001361 177.0
YYD2_k127_6173763_12 DinB family - - - 0.00000000000000000000000000000000000000000000009507 173.0
YYD2_k127_6173763_13 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000001945 149.0
YYD2_k127_6173763_14 Domain of unknown function (DUF4281) - - - 0.000000000000000000000000000000000005956 141.0
YYD2_k127_6173763_15 - - - - 0.00000000000000000000000000000000002715 153.0
YYD2_k127_6173763_16 Cytochrome C' - - - 0.0000000000000000000000000000000001137 141.0
YYD2_k127_6173763_17 histone H2A K63-linked ubiquitination - - - 0.00000000000000000000000000000005825 134.0
YYD2_k127_6173763_18 - - - - 0.0000000000000000000000000000001236 133.0
YYD2_k127_6173763_19 membrane transporter protein K07090 - - 0.00000000000000000000001036 111.0
YYD2_k127_6173763_2 DNA topological change K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006821 628.0
YYD2_k127_6173763_20 PFAM Cupin 2, conserved barrel - - - 0.0000006516 51.0
YYD2_k127_6173763_21 Pyrimidine reductase, riboflavin biosynthesis K00082 - 1.1.1.193 0.00000776 55.0
YYD2_k127_6173763_3 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 330.0
YYD2_k127_6173763_4 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 321.0
YYD2_k127_6173763_5 Patatin-like phospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006391 296.0
YYD2_k127_6173763_6 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000847 268.0
YYD2_k127_6173763_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001634 252.0
YYD2_k127_6173763_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001017 248.0
YYD2_k127_6173763_9 Ankyrin repeats (many copies) - - - 0.000000000000000000000000000000000000000000000000000000000000065 242.0
YYD2_k127_6174923_0 NHL repeat containing protein - - - 0.00000000000000000000000000000001852 143.0
YYD2_k127_6174923_1 Belongs to the 'phage' integrase family - - - 0.0000000000003611 76.0
YYD2_k127_6174923_2 Belongs to the 'phage' integrase family - - - 0.0000005419 54.0
YYD2_k127_618531_0 Oxygenase, catalysing oxidative methylation of damaged DNA K09990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005391 433.0
YYD2_k127_618531_1 Metal binding domain of Ada K00567,K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000118 284.0
YYD2_k127_618531_2 - - - - 0.0000000000000000000000000001441 124.0
YYD2_k127_6218936_0 Patatin-like phospholipase - - - 0.000000000000000000000000000000000000000000000000000001599 199.0
YYD2_k127_6218936_2 - - - - 0.000000000000000000000388 105.0
YYD2_k127_6218936_3 Transposase IS116/IS110/IS902 family - - - 0.000007049 49.0
YYD2_k127_6220544_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006329 357.0
YYD2_k127_6220544_1 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog - - - 0.00000000000000000000000000000000000008765 145.0
YYD2_k127_6225217_0 PFAM TonB-dependent Receptor Plug Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 522.0
YYD2_k127_6225217_1 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000695 285.0
YYD2_k127_6225217_2 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000002792 256.0
YYD2_k127_6234561_0 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000006811 217.0
YYD2_k127_6238201_0 Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000964 601.0
YYD2_k127_6238201_1 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008738 444.0
YYD2_k127_6238201_10 - - - - 0.00000000000000001323 90.0
YYD2_k127_6238201_2 DnaJ central domain K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 428.0
YYD2_k127_6238201_3 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000001927 244.0
YYD2_k127_6238201_4 Alpha beta - - - 0.00000000000000000000000000000000000000000000000000000000000001056 226.0
YYD2_k127_6238201_5 XdhC and CoxI family K07402 - - 0.00000000000000000000000000000000000000000000000000000000000001514 225.0
YYD2_k127_6238201_6 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000001235 213.0
YYD2_k127_6238201_7 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.000000000000000000000000000000000000007054 151.0
YYD2_k127_6238201_8 Protein of unknown function (DUF2089) - - - 0.00000000000000000000000000000000001304 139.0
YYD2_k127_6238201_9 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000007595 138.0
YYD2_k127_6241074_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 475.0
YYD2_k127_6241074_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 456.0
YYD2_k127_6241074_10 PFAM glycosyl transferase family 9 K02841 - - 0.000000000000000000000000000000000000000000000003822 185.0
YYD2_k127_6241074_11 - - - - 0.00000000000000000000000000000000000000000001415 168.0
YYD2_k127_6241074_12 TIGRFAM D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000003479 164.0
YYD2_k127_6241074_13 Belongs to the 'phage' integrase family - - - 0.0000000000000000000007621 99.0
YYD2_k127_6241074_14 - - - - 0.000000000000001204 85.0
YYD2_k127_6241074_15 Protein of unknown function (DUF433) - - - 0.000000000000006194 77.0
YYD2_k127_6241074_16 - - - - 0.0000000000001192 79.0
YYD2_k127_6241074_17 Preprotein translocase SecG subunit K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.0000000000002631 74.0
YYD2_k127_6241074_18 Phospholipid methyltransferase - - - 0.00000000004601 75.0
YYD2_k127_6241074_2 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007665 323.0
YYD2_k127_6241074_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001383 284.0
YYD2_k127_6241074_4 TIGRFAM rfaE bifunctional protein, domain I K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000003295 258.0
YYD2_k127_6241074_5 D,D-heptose 1,7-bisphosphate phosphatase K02841,K02843,K02849,K03271,K03272,K03273 - 2.7.1.167,2.7.7.70,3.1.3.82,3.1.3.83,5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000004424 232.0
YYD2_k127_6241074_6 PAP2 superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000006338 236.0
YYD2_k127_6241074_7 Lipid A biosynthesis K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000001886 196.0
YYD2_k127_6241074_8 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000000000000003829 181.0
YYD2_k127_6241074_9 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000001807 188.0
YYD2_k127_6250994_0 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 342.0
YYD2_k127_6250994_1 glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001492 290.0
YYD2_k127_6250994_2 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000001168 209.0
YYD2_k127_6250994_3 Glycosyl hydrolases family 43 - - - 0.0000000000000000002417 89.0
YYD2_k127_6250994_5 Domain of unknown function (DU1801) - - - 0.0000002347 63.0
YYD2_k127_6254376_0 epoxide hydrolase - - - 2.027e-213 670.0
YYD2_k127_6254376_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.00000000000000000000000000000000005577 140.0
YYD2_k127_6255034_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 484.0
YYD2_k127_6255034_1 dna ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 416.0
YYD2_k127_6255034_3 Periplasmic or secreted lipoprotein K04065 GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 - 0.0007678 48.0
YYD2_k127_6255305_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 443.0
YYD2_k127_6255305_1 STELLO glycosyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005134 407.0
YYD2_k127_6255305_2 Glycosyl transferase, family 2 K16648 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 293.0
YYD2_k127_6255305_3 COG0500 SAM-dependent methyltransferases - - - 0.0000000000000000000000000000000000000000000000000000006709 201.0
YYD2_k127_6255305_4 transferase activity, transferring glycosyl groups - - - 0.0000000000000000003385 94.0
YYD2_k127_6270652_0 amino acid K03294 - - 2.695e-200 635.0
YYD2_k127_6270652_1 FAD linked oxidases, C-terminal domain K00102,K00104 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0033554,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 1.1.2.4,1.1.3.15 8.667e-194 615.0
YYD2_k127_6270652_2 Domain of unknown function (DUF2088) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 459.0
YYD2_k127_6270652_3 Cysteine-rich domain K11473 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 461.0
YYD2_k127_6270652_4 L-lactate permease K03303 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 316.0
YYD2_k127_6270652_5 FAD linked oxidases, C-terminal domain K11472 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003573 264.0
YYD2_k127_6270652_6 Low affinity iron permease - - - 0.0000000000000000000000000000000000002585 144.0
YYD2_k127_6270652_7 cell wall anchor domain - - - 0.0000000000183 77.0
YYD2_k127_6272745_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 5.109e-205 668.0
YYD2_k127_6272745_1 phosphorelay signal transduction system K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 394.0
YYD2_k127_6272745_2 - - - - 0.0004768 49.0
YYD2_k127_6283211_0 Esterase of the alpha-beta hydrolase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000001935 227.0
YYD2_k127_6283211_1 Belongs to the TPP enzyme family K01576,K01652 - 2.2.1.6,4.1.1.7 0.00000000002275 64.0
YYD2_k127_6283211_2 Cytochrome c K17760 - 1.1.9.1 0.000000000157 67.0
YYD2_k127_6295210_0 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 320.0
YYD2_k127_6295210_1 DNA-templated transcription, initiation K03088 - - 0.0000000007005 68.0
YYD2_k127_6295210_2 - - - - 0.0000747 47.0
YYD2_k127_6315405_0 COG0463 Glycosyltransferases involved in cell wall biogenesis K20444 - - 0.0 1147.0
YYD2_k127_6315405_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 456.0
YYD2_k127_6315405_2 STELLO glycosyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006808 407.0
YYD2_k127_6315405_3 Glycosyl transferase family 2 K20444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000323 338.0
YYD2_k127_6315405_4 Glycosyl transferase, family 2 K16648 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 298.0
YYD2_k127_6315405_5 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009177 316.0
YYD2_k127_6315405_6 methyltransferase - - - 0.00000000002046 79.0
YYD2_k127_6315405_7 Wzt C-terminal domain K09691 - - 0.000009944 49.0
YYD2_k127_631582_0 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.000000000000000000000000000000000000000005106 172.0
YYD2_k127_6315892_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 4.583e-247 786.0
YYD2_k127_6315892_1 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006812 409.0
YYD2_k127_6315892_10 - - - - 0.0000000000000000005438 91.0
YYD2_k127_6315892_11 Isoprenylcysteine carboxyl methyltransferase (ICMT) family K21310 - 2.1.1.334 0.0000000000006563 70.0
YYD2_k127_6315892_2 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 367.0
YYD2_k127_6315892_3 Glycosyl transferase family 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007321 251.0
YYD2_k127_6315892_4 Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000000000000000000000000000000000007548 239.0
YYD2_k127_6315892_5 Putative restriction endonuclease - - - 0.000000000000000000000000000000000000000000000000000000805 198.0
YYD2_k127_6315892_6 PRMT5 arginine-N-methyltransferase K11434 - 2.1.1.319 0.0000000000000000000000000000000000000000000000000001293 200.0
YYD2_k127_6315892_7 HPr kinase - - - 0.000000000000000000000000000000000000000000000000005958 195.0
YYD2_k127_6315892_8 PFAM Penicillinase repressor - - - 0.0000000000000000000000000000000000000001983 153.0
YYD2_k127_6315892_9 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000009428 164.0
YYD2_k127_6320060_0 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004472 579.0
YYD2_k127_6320060_1 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 490.0
YYD2_k127_6320060_2 - - - - 0.0000000000000000000000000000000002223 142.0
YYD2_k127_6333272_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 588.0
YYD2_k127_6333272_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 536.0
YYD2_k127_6333272_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 497.0
YYD2_k127_6333272_3 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 408.0
YYD2_k127_6333272_4 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000002771 238.0
YYD2_k127_6333272_5 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000000000000000000000000004343 213.0
YYD2_k127_6333272_6 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000000002626 164.0
YYD2_k127_6344855_0 Spermidine synthase K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000001009 172.0
YYD2_k127_6344855_2 - - - - 0.000000000000000000002142 98.0
YYD2_k127_6356491_0 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K20940 - 1.14.13.218 4.511e-208 657.0
YYD2_k127_6356491_1 Stress responsive A/B Barrel Domain - - - 0.0000000000000000000000000000002958 126.0
YYD2_k127_6356491_2 LysR substrate binding domain K05817 - - 0.00000000000000000003369 91.0
YYD2_k127_6364365_0 phosphorelay signal transduction system K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 509.0
YYD2_k127_6364365_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006099 287.0
YYD2_k127_6364365_2 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.0000006188 53.0
YYD2_k127_6379722_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 501.0
YYD2_k127_6379722_1 PFAM General substrate transporter - - - 0.000000000000000000000000000000000000000000002406 172.0
YYD2_k127_6379722_2 - - - - 0.00000000000000000000000000000000000000004346 160.0
YYD2_k127_638311_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1063.0
YYD2_k127_638311_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 8.92e-196 625.0
YYD2_k127_638311_2 DNA alkylation repair enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002097 265.0
YYD2_k127_638311_3 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000001631 208.0
YYD2_k127_638311_4 CDP-alcohol phosphatidyltransferase - - - 0.0000000000000000000000000000000000000000000000001575 195.0
YYD2_k127_638311_5 COG4635 Flavodoxin K00230 - 1.3.5.3 0.000000000000000000000000000000000000634 146.0
YYD2_k127_638311_6 - - - - 0.00002287 46.0
YYD2_k127_63907_0 Oxidoreductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000002536 245.0
YYD2_k127_63907_1 MacB-like periplasmic core domain - - - 0.00000000000000718 76.0
YYD2_k127_640460_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1065.0
YYD2_k127_640460_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000001166 171.0
YYD2_k127_641627_0 PFAM phosphate transporter K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 387.0
YYD2_k127_641627_1 histidine kinase HAMP region domain protein K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643 345.0
YYD2_k127_641627_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005391 285.0
YYD2_k127_641627_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003197 275.0
YYD2_k127_641627_4 response regulator K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000005728 235.0
YYD2_k127_641627_5 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000001186 190.0
YYD2_k127_641627_6 PFAM phosphoesterase, PA-phosphatase related - - - 0.00000000000000003325 91.0
YYD2_k127_641627_8 - - - - 0.00000000001411 68.0
YYD2_k127_641627_9 Surface antigen - - - 0.00000000009709 74.0
YYD2_k127_65156_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 3.101e-203 663.0
YYD2_k127_65156_1 Phosphatidylethanolamine-binding protein - - - 0.0000000000000000000000000003046 121.0
YYD2_k127_65378_0 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 598.0
YYD2_k127_65378_1 major pilin protein fima - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 415.0
YYD2_k127_65378_10 - - - - 0.00000000000000001161 95.0
YYD2_k127_65378_11 - - - - 0.0000000002519 65.0
YYD2_k127_65378_12 von Willebrand factor, type A K07114 - - 0.0001725 52.0
YYD2_k127_65378_2 acr, cog1565 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 344.0
YYD2_k127_65378_3 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 327.0
YYD2_k127_65378_4 protein-(glutamine-N5) methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 315.0
YYD2_k127_65378_5 Methylene-tetrahydrofolate reductase C terminal K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000002995 280.0
YYD2_k127_65378_6 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000001454 214.0
YYD2_k127_65378_7 sequence-specific DNA binding K07726 - - 0.00000000000000000000000000002769 123.0
YYD2_k127_65378_8 protein with SCP PR1 domains - - - 0.0000000000000000000000000006997 120.0
YYD2_k127_65378_9 - - - - 0.00000000000000000000000001317 114.0
YYD2_k127_67480_0 Belongs to the ClpA ClpB family K03696 GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 - 1.785e-268 848.0
YYD2_k127_67480_1 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 557.0
YYD2_k127_67480_10 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 304.0
YYD2_k127_67480_11 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008779 291.0
YYD2_k127_67480_12 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001498 281.0
YYD2_k127_67480_13 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000001787 263.0
YYD2_k127_67480_14 Protein of unknown function (DUF1009) K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001196 277.0
YYD2_k127_67480_15 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000003962 265.0
YYD2_k127_67480_16 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008678 245.0
YYD2_k127_67480_17 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000003663 250.0
YYD2_k127_67480_18 Amidohydrolase family K20810 - 3.5.4.40 0.00000000000000000000000000000000000000000000000000000000000007932 229.0
YYD2_k127_67480_19 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000795 209.0
YYD2_k127_67480_2 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003496 463.0
YYD2_k127_67480_20 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K07081,K11782,K11784 - 1.21.98.1,4.2.1.151 0.000000000000000000000000000000000000000000000000008786 191.0
YYD2_k127_67480_21 6,7-dimethyl-8-ribityllumazine synthase K00794 - 2.5.1.78 0.00000000000000000000000000000000000000003412 157.0
YYD2_k127_67480_22 PFAM von Willebrand factor type A K07114 - - 0.0000000000000000000000000000000004075 145.0
YYD2_k127_67480_23 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000002516 124.0
YYD2_k127_67480_24 Uncharacterized ACR, COG1399 K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000001752 120.0
YYD2_k127_67480_25 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.00000000000000000000002293 111.0
YYD2_k127_67480_26 - - - - 0.0000000000000000001329 103.0
YYD2_k127_67480_27 TonB C terminal - - - 0.000000000000000001183 97.0
YYD2_k127_67480_28 Ribosomal L32p protein family K02911 - - 0.0000000000000000399 85.0
YYD2_k127_67480_29 Antibiotic biosynthesis monooxygenase K11530 - 5.3.1.32 0.000000000000002931 79.0
YYD2_k127_67480_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007359 473.0
YYD2_k127_67480_30 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000009297 77.0
YYD2_k127_67480_31 Protein tyrosine kinase - - - 0.00000000000005659 84.0
YYD2_k127_67480_32 PFAM VanZ like - - - 0.00000000000006437 78.0
YYD2_k127_67480_33 - - - - 0.00000000000006544 83.0
YYD2_k127_67480_34 Predicted membrane protein (DUF2085) - - - 0.0000001687 59.0
YYD2_k127_67480_35 Belongs to the skp family K06142 - - 0.00000165 59.0
YYD2_k127_67480_37 - - - - 0.00001807 54.0
YYD2_k127_67480_38 energy transducer activity K03832,K07126 - - 0.0003273 52.0
YYD2_k127_67480_4 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004196 413.0
YYD2_k127_67480_5 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007677 422.0
YYD2_k127_67480_6 TIGRFAM deoxyguanosinetriphosphate triphosphohydrolase K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004183 385.0
YYD2_k127_67480_7 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004804 346.0
YYD2_k127_67480_8 TIGRFAM outer membrane protein assembly complex, YaeT protein K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 349.0
YYD2_k127_67480_9 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002803 323.0
YYD2_k127_684996_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 5.018e-209 657.0
YYD2_k127_684996_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 542.0
YYD2_k127_684996_2 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008711 319.0
YYD2_k127_684996_3 ATPase activity K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000234 231.0
YYD2_k127_684996_4 COG4993 Glucose dehydrogenase - - - 0.000000000000000000000003961 107.0
YYD2_k127_684996_5 transcriptional regulator PadR family - - - 0.0000000000000000000006605 99.0
YYD2_k127_684996_6 PFAM Pyrrolo-quinoline quinone K00117 - 1.1.5.2 0.000000000000003052 79.0
YYD2_k127_684996_7 PQQ-like domain K00117 - 1.1.5.2 0.000000000185 70.0
YYD2_k127_684996_8 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000009178 50.0
YYD2_k127_684996_9 - - - - 0.0005014 53.0
YYD2_k127_6886_0 Nitronate monooxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004953 387.0
YYD2_k127_6886_1 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007159 287.0
YYD2_k127_6886_2 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000004571 136.0
YYD2_k127_6886_3 - - - - 0.000000000000000009701 88.0
YYD2_k127_6886_4 - - - - 0.00002207 51.0
YYD2_k127_6886_5 Integrase core domain K07497 - - 0.0004156 47.0
YYD2_k127_691564_0 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 389.0
YYD2_k127_691564_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005247 392.0
YYD2_k127_691564_2 KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.00000000000000000000000000000000000000000000000000000000000000003517 233.0
YYD2_k127_691564_3 enzyme involved in inositol metabolism K03337 - 5.3.1.30 0.00000000000000000000000000000000000000001217 154.0
YYD2_k127_691564_4 - - - - 0.000000000000000000000000000001389 125.0
YYD2_k127_691564_5 OmpA family - - - 0.0000000000000000000000000002366 127.0
YYD2_k127_691564_6 2-deoxy-D-gluconate 3-dehydrogenase K00065 - 1.1.1.127 0.00000000000000004951 84.0
YYD2_k127_691564_7 Metallo-beta-lactamase superfamily - - - 0.00000035 63.0
YYD2_k127_691564_8 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.000004227 56.0
YYD2_k127_691564_9 Fic/DOC family - - - 0.0009014 46.0
YYD2_k127_709199_0 Amidohydrolase K14333,K20941 - 4.1.1.103,4.1.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 348.0
YYD2_k127_709199_1 Carboxylesterase family K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000375 334.0
YYD2_k127_709199_10 protein kinase activity K12132 - 2.7.11.1 0.00001926 58.0
YYD2_k127_709199_11 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0003382 52.0
YYD2_k127_709199_2 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003194 251.0
YYD2_k127_709199_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000006504 234.0
YYD2_k127_709199_4 - - - - 0.000000000000000000000000000000000000007236 159.0
YYD2_k127_709199_6 - - - - 0.00000000000000000000000000001169 126.0
YYD2_k127_709199_7 - - - - 0.0000000000000000000000006021 118.0
YYD2_k127_709199_8 PEGA domain - - - 0.000000000000000003343 100.0
YYD2_k127_709199_9 - - - - 0.0000004804 57.0
YYD2_k127_713053_0 - - - - 0.00000000000000000000000000000000000005338 145.0
YYD2_k127_713053_2 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00000000000009785 76.0
YYD2_k127_713053_3 Domain of unknown function (DU1801) - - - 0.000007344 53.0
YYD2_k127_713648_0 Common central domain of tyrosinase K00505 - 1.14.18.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 479.0
YYD2_k127_713648_1 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 496.0
YYD2_k127_713648_2 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 490.0
YYD2_k127_713648_4 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000004244 149.0
YYD2_k127_713648_5 domain protein K14194 - - 0.000000000000000000000000000000334 143.0
YYD2_k127_713648_6 Surface antigen - - - 0.0000000000000006402 90.0
YYD2_k127_714604_0 asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 602.0
YYD2_k127_714604_1 PFAM 4-hydroxyphenylacetate 3-hydroxylase K00483 - 1.14.14.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 392.0
YYD2_k127_714604_2 Elongator protein 3, MiaB family, Radical SAM K06936 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 338.0
YYD2_k127_714604_3 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.000000000000000000000000000000000000000000000000000005816 193.0
YYD2_k127_714604_4 Flavin reductase like domain - - - 0.000000000000000000000000000000000002052 143.0
YYD2_k127_714604_5 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000756 108.0
YYD2_k127_714604_6 - - - - 0.0000000000005268 71.0
YYD2_k127_725760_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008791 629.0
YYD2_k127_725760_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004713 608.0
YYD2_k127_725760_2 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003091 602.0
YYD2_k127_72741_0 Class II Aldolase and Adducin N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000004421 241.0
YYD2_k127_735760_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004384 291.0
YYD2_k127_735760_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002519 259.0
YYD2_k127_735760_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000001552 169.0
YYD2_k127_741594_0 Belongs to the peptidase S1B family - - - 0.0000000000000000000000000000000005347 146.0
YYD2_k127_741594_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000004941 94.0
YYD2_k127_741594_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000001435 66.0
YYD2_k127_774604_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 540.0
YYD2_k127_774604_1 - - - - 0.00001049 50.0
YYD2_k127_788292_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 1.054e-201 653.0
YYD2_k127_788292_1 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000001007 230.0
YYD2_k127_788292_2 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000003338 200.0
YYD2_k127_788292_3 cytochrome C peroxidase - - - 0.0000000000000000000000000000000000000000000000007828 180.0
YYD2_k127_805299_0 Putative glucoamylase K13688 - - 0.0 2390.0
YYD2_k127_805299_1 Carboxypeptidase regulatory-like domain - - - 1.102e-243 790.0
YYD2_k127_805299_10 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000008242 229.0
YYD2_k127_805299_11 NHL repeat - - - 0.00000000000000000000000000000000000000000002429 173.0
YYD2_k127_805299_12 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000199 159.0
YYD2_k127_805299_13 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000004031 140.0
YYD2_k127_805299_15 peptidyl-tyrosine sulfation - - - 0.00000003386 61.0
YYD2_k127_805299_2 Insulinase (Peptidase family M16) K07263 - - 8.294e-212 691.0
YYD2_k127_805299_3 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 499.0
YYD2_k127_805299_4 PQQ-like domain K05889 - 1.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 470.0
YYD2_k127_805299_5 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 434.0
YYD2_k127_805299_6 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008926 411.0
YYD2_k127_805299_7 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K20974 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006093 327.0
YYD2_k127_805299_8 L,D-transpeptidase catalytic domain K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001553 280.0
YYD2_k127_805299_9 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002218 255.0
YYD2_k127_817884_0 TamB, inner membrane protein subunit of TAM complex K07277,K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004834 323.0
YYD2_k127_820408_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 7.969e-245 765.0
YYD2_k127_820408_1 phosphorelay signal transduction system K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003204 526.0
YYD2_k127_820408_10 AsmA family - - - 0.00009831 53.0
YYD2_k127_820408_11 PFAM CAAX amino terminal protease family K07052 - - 0.0002682 51.0
YYD2_k127_820408_12 alginic acid biosynthetic process K01406 - 3.4.24.40 0.0007824 51.0
YYD2_k127_820408_2 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003888 498.0
YYD2_k127_820408_3 Multi-sensor signal transduction histidine kinase K07710 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 331.0
YYD2_k127_820408_4 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016832,GO:0019637,GO:0044237,GO:0071704,GO:1901135 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548 295.0
YYD2_k127_820408_5 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001137 302.0
YYD2_k127_820408_6 membrane organization K07277,K09800 - - 0.000000000000000000000000000000000000000000000618 192.0
YYD2_k127_820408_7 Biotin-requiring enzyme - - - 0.00000000000000000000402 101.0
YYD2_k127_820408_8 Fibronectin type 3 domain - - - 0.00000000003644 75.0
YYD2_k127_820408_9 Outer membrane protein, OMP85 family K07277 - - 0.000000006603 67.0
YYD2_k127_826752_0 Ribosomal protein S1 K02945 - - 3.812e-208 662.0
YYD2_k127_826752_1 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 329.0
YYD2_k127_826752_2 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000002684 196.0
YYD2_k127_826752_3 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000000000005759 179.0
YYD2_k127_826752_4 - - - - 0.000000000000000000001251 105.0
YYD2_k127_830406_0 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02236,K02278,K02506,K02654,K10966 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000002379 232.0
YYD2_k127_830406_1 PAS fold K07710 GO:0000155,GO:0000160,GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0017076,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.13.3 0.00000000000000000000000000000000000000000004611 179.0
YYD2_k127_835114_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 1.263e-246 771.0
YYD2_k127_835114_1 PQQ-like domain K05889 - 1.1.2.6 0.00000000000000000000000000000000000000000000000000000000000007391 231.0
YYD2_k127_835114_2 - - - - 0.0000000000002157 74.0
YYD2_k127_835114_3 endonuclease activity K07451 - - 0.000000001591 65.0
YYD2_k127_847283_0 Pyrrolo-quinoline quinone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005557 514.0
YYD2_k127_847283_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009531 517.0
YYD2_k127_847283_2 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000009973 209.0
YYD2_k127_852347_0 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 333.0
YYD2_k127_852347_1 TonB-dependent Receptor Plug K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009305 316.0
YYD2_k127_852347_2 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000000000000000000000000000000004117 156.0
YYD2_k127_8553_0 - - - - 0.0000000000000000001509 100.0
YYD2_k127_8553_1 Carboxypeptidase regulatory-like domain - - - 0.00000000000000003449 90.0
YYD2_k127_8553_2 - - - - 0.0000000000007038 72.0
YYD2_k127_856213_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 GO:0003674,GO:0003824,GO:0003861,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009316,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000572 582.0
YYD2_k127_856213_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000576 457.0
YYD2_k127_856213_10 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000003387 134.0
YYD2_k127_856213_11 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000006114 105.0
YYD2_k127_856213_2 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 301.0
YYD2_k127_856213_3 Transcriptional regulator, LysR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001267 261.0
YYD2_k127_856213_4 Thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000001257 241.0
YYD2_k127_856213_5 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000003228 234.0
YYD2_k127_856213_6 Mechanosensitive ion channel K22044 - - 0.000000000000000000000000000000000000000000000000000000000000000000686 241.0
YYD2_k127_856213_7 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000005346 207.0
YYD2_k127_856213_8 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000002765 201.0
YYD2_k127_856213_9 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000001967 179.0
YYD2_k127_867172_0 - - - - 0.00000000000001519 80.0
YYD2_k127_867172_1 peptidyl-tyrosine sulfation - - - 0.00000000009187 75.0
YYD2_k127_867709_0 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 2.216e-245 785.0
YYD2_k127_867709_1 phosphatase activity - - - 7.657e-209 669.0
YYD2_k127_867709_10 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000005491 104.0
YYD2_k127_867709_11 COG2010 Cytochrome c, mono- and diheme variants - - - 0.0000000000000000001472 100.0
YYD2_k127_867709_12 - - - - 0.0000000000002362 80.0
YYD2_k127_867709_13 Universal stress protein family - - - 0.0000000000002921 81.0
YYD2_k127_867709_14 PFAM OsmC family protein - - - 0.00000000008871 64.0
YYD2_k127_867709_2 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008029 481.0
YYD2_k127_867709_3 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003325 461.0
YYD2_k127_867709_4 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 314.0
YYD2_k127_867709_5 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 302.0
YYD2_k127_867709_6 bacterial OsmY and nodulation domain - - - 0.00000000000000000000000000000000000000000000004248 177.0
YYD2_k127_867709_7 VIT family - - - 0.0000000000000000000000000000000000006592 147.0
YYD2_k127_867709_8 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000000000000000000002131 121.0
YYD2_k127_867709_9 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00000000000000000000000003452 121.0
YYD2_k127_870255_0 ASPIC and UnbV - - - 2.475e-261 815.0
YYD2_k127_870255_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 476.0
YYD2_k127_870255_10 - - - - 0.00000000000000000000000002901 124.0
YYD2_k127_870255_11 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000765 126.0
YYD2_k127_870255_12 YtkA-like - - - 0.0000000000000000009793 97.0
YYD2_k127_870255_13 Phosphate-selective porin O and P K07221 - - 0.0000004292 62.0
YYD2_k127_870255_14 CAAX protease self-immunity - - - 0.00005735 51.0
YYD2_k127_870255_2 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002955 458.0
YYD2_k127_870255_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 449.0
YYD2_k127_870255_4 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007803 278.0
YYD2_k127_870255_5 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006282 254.0
YYD2_k127_870255_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000886 227.0
YYD2_k127_870255_7 Spore coat protein CotH - - - 0.0000000000000000000000000000000000000000000000000000000281 219.0
YYD2_k127_870255_8 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000004606 188.0
YYD2_k127_870255_9 Tetratricopeptide repeat - - - 0.000000000000000000000000000000003826 139.0
YYD2_k127_870540_0 Transporter associated domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006592 430.0
YYD2_k127_870540_1 Transporter associated domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004174 405.0
YYD2_k127_870540_2 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007896 317.0
YYD2_k127_870540_3 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000001845 227.0
YYD2_k127_870540_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000002496 123.0
YYD2_k127_870540_5 S-acyltransferase activity K00658,K09699 - 2.3.1.168,2.3.1.61 0.000000000000000000000000001267 113.0
YYD2_k127_870540_6 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0003189 45.0
YYD2_k127_874480_0 Carboxypeptidase regulatory-like domain - - - 0.0 1035.0
YYD2_k127_874480_1 Putative adhesin - - - 0.000000000000000000000000000001589 133.0
YYD2_k127_874480_2 LysM domain - - - 0.000000000000000002591 91.0
YYD2_k127_874480_3 RNA polymerase, sigma-24 subunit, ECF subfamily K02405 - - 0.0001658 50.0
YYD2_k127_890216_0 Acyl transferase domain in polyketide synthase (PKS) enzymes. - - - 0.0 2368.0
YYD2_k127_890216_1 PQQ-like domain K00114 - 1.1.2.8 1.375e-240 762.0
YYD2_k127_890216_10 - - - - 0.0000000000000002135 85.0
YYD2_k127_890216_14 - - - - 0.00000002241 66.0
YYD2_k127_890216_2 Helix-hairpin-helix class 2 (Pol1 family) motifs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003691 366.0
YYD2_k127_890216_3 Protein of unknown function (DUF692) K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008475 290.0
YYD2_k127_890216_4 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000001942 234.0
YYD2_k127_890216_6 tRNA cytidylyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000002609 192.0
YYD2_k127_890216_7 peptidyl-tyrosine sulfation - - - 0.00000000000000000000002998 114.0
YYD2_k127_890216_8 - - - - 0.000000000000000000001299 109.0
YYD2_k127_891765_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 488.0
YYD2_k127_891765_1 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 343.0
YYD2_k127_891765_2 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009936 262.0
YYD2_k127_891765_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000001088 207.0
YYD2_k127_891765_4 lipid kinase activity - - - 0.0000000000000000000000000000000000000001775 164.0
YYD2_k127_891765_5 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000001599 108.0
YYD2_k127_908567_0 Transport of potassium into the cell K03549 - - 3.131e-238 751.0
YYD2_k127_908567_1 Amino acid permease - - - 1.351e-202 648.0
YYD2_k127_908567_10 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000001076 132.0
YYD2_k127_908567_11 cAMP biosynthetic process - - - 0.00000000000000000000000002316 117.0
YYD2_k127_908567_12 mannose-ethanolamine phosphotransferase activity - - - 0.00002866 57.0
YYD2_k127_908567_2 Osmosensitive K channel His kinase sensor K07646 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 446.0
YYD2_k127_908567_4 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 323.0
YYD2_k127_908567_5 Histidine kinase K07646 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000001543 254.0
YYD2_k127_908567_6 Response regulator receiver K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000009981 240.0
YYD2_k127_908567_7 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 0.0000000000000000000000000000000000000000000000000000000000001566 218.0
YYD2_k127_908567_8 AI-2E family transporter - - - 0.00000000000000000000000000000000000009027 151.0
YYD2_k127_908567_9 Four helix bundle sensory module for signal transduction - - - 0.0000000000000000000000000000002072 136.0
YYD2_k127_908704_0 Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000000000000000000000001898 217.0
YYD2_k127_908704_1 DinB family - - - 0.00000000000000000000000000000000000008559 148.0
YYD2_k127_908704_2 - - - - 0.000000000000000000000000331 111.0
YYD2_k127_9243_0 ABC transporter transmembrane region K11085 - - 1.649e-253 796.0
YYD2_k127_9243_1 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 3.982e-231 729.0
YYD2_k127_9243_10 SnoaL-like polyketide cyclase - - - 0.000000000005337 72.0
YYD2_k127_9243_11 Protein of unknown function (DUF533) - - - 0.00000005093 65.0
YYD2_k127_9243_2 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005145 327.0
YYD2_k127_9243_3 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002097 293.0
YYD2_k127_9243_4 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000002357 251.0
YYD2_k127_9243_5 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000000000000000008081 163.0
YYD2_k127_9243_6 ApaG domain K06195 - - 0.000000000000000000000000000000000000000004092 158.0
YYD2_k127_9243_7 DinB family - - - 0.0000000000000000000000000000000000005173 145.0
YYD2_k127_9243_8 oxidation-reduction process - - - 0.00000000000000000000000000000000001858 141.0
YYD2_k127_9243_9 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000000000000006695 107.0
YYD2_k127_92537_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 586.0
YYD2_k127_92537_1 peroxiredoxin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006266 481.0
YYD2_k127_92537_3 - - - - 0.0000000000000000000000000000007437 132.0
YYD2_k127_92537_4 Peptidase family M20/M25/M40 - - - 0.0000000005811 60.0
YYD2_k127_935456_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00239,K00244,K00278 GO:0000104,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0022900,GO:0032991,GO:0044237,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803 1.3.5.1,1.3.5.4,1.4.3.16 3.471e-293 908.0
YYD2_k127_935456_1 nitrite transmembrane transporter activity K08177 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 544.0
YYD2_k127_935456_2 Dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 407.0
YYD2_k127_935456_3 Succinate dehydrogenase fumarate reductase K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 397.0
YYD2_k127_935456_4 Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane K00247 - - 0.000000000000000000000000000000000001433 141.0
YYD2_k127_935456_5 Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane K00246 - - 0.000000000000000000000000000001829 132.0
YYD2_k127_935456_6 - - - - 0.000000000000001808 78.0
YYD2_k127_936681_0 major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 402.0
YYD2_k127_936681_1 Major Facilitator Superfamily K08191 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007766 302.0
YYD2_k127_936681_2 PFAM Stage II sporulation E family protein K01079,K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000407 300.0
YYD2_k127_936681_3 Tetratricopeptide repeat K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000004099 241.0
YYD2_k127_936681_4 PIN domain - - - 0.00000000000000000000000000000000000001009 149.0
YYD2_k127_936681_5 Crp-like helix-turn-helix domain K10914 - - 0.000000000000000000005938 102.0
YYD2_k127_936681_6 positive regulation of growth - - - 0.00000232 59.0
YYD2_k127_945670_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 6.549e-298 931.0
YYD2_k127_945670_1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000004269 229.0
YYD2_k127_945670_2 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000465 219.0
YYD2_k127_945670_3 ECF sigma factor - - - 0.000000000000000000000000000000000000000002679 165.0
YYD2_k127_951445_0 Protein export membrane protein - - - 0.0 1272.0
YYD2_k127_951445_1 Sodium/hydrogen exchanger family K03316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009006 615.0
YYD2_k127_951445_10 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003128 263.0
YYD2_k127_951445_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000004649 234.0
YYD2_k127_951445_12 Bacterial PH domain K08981 - - 0.0000000000000000000000000000000000000000000000000000000000000005718 240.0
YYD2_k127_951445_13 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000003827 209.0
YYD2_k127_951445_14 Bacterial PH domain K09167 - - 0.00000000000000000006483 96.0
YYD2_k127_951445_15 Divergent 4Fe-4S mono-cluster K05337 - - 0.00000000000001832 76.0
YYD2_k127_951445_16 Acid phosphatase homologues - - - 0.000000000005319 77.0
YYD2_k127_951445_17 6-phosphogluconolactonase K01057 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009051,GO:0009117,GO:0009987,GO:0016787,GO:0016788,GO:0017057,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0052689,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 3.1.1.31 0.0004566 43.0
YYD2_k127_951445_2 ATP:ADP antiporter activity K01932,K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007253 427.0
YYD2_k127_951445_3 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 405.0
YYD2_k127_951445_4 pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000407 397.0
YYD2_k127_951445_5 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 382.0
YYD2_k127_951445_6 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006907 363.0
YYD2_k127_951445_7 ATP ADP translocase K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007756 318.0
YYD2_k127_951445_8 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 299.0
YYD2_k127_951445_9 efflux transmembrane transporter activity K15725 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007696 285.0
YYD2_k127_958208_0 Transport of potassium into the cell K03549 - - 1.7e-228 724.0
YYD2_k127_958208_1 DNA topological change K03168 - 5.99.1.2 1.985e-216 699.0
YYD2_k127_958208_10 PFAM lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000001279 190.0
YYD2_k127_958208_11 manganese ion transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000004679 197.0
YYD2_k127_958208_12 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000004677 166.0
YYD2_k127_958208_13 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000002059 123.0
YYD2_k127_958208_14 domain-containing protein K16726 GO:0000785,GO:0001568,GO:0001654,GO:0001745,GO:0001751,GO:0001754,GO:0001817,GO:0001819,GO:0001944,GO:0001955,GO:0002376,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002831,GO:0002833,GO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005694,GO:0005737,GO:0006275,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007005,GO:0007010,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007346,GO:0007399,GO:0007423,GO:0007492,GO:0008150,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009887,GO:0009888,GO:0009889,GO:0009892,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009987,GO:0010506,GO:0010507,GO:0010556,GO:0010564,GO:0010639,GO:0010646,GO:0010647,GO:0010821,GO:0010823,GO:0010927,GO:0010941,GO:0012505,GO:0016020,GO:0016043,GO:0019219,GO:0019222,GO:0019730,GO:0019899,GO:0019900,GO:0019901,GO:0021700,GO:0022008,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030036,GO:0030154,GO:0030182,GO:0030239,GO:0031032,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031329,GO:0031330,GO:0031347,GO:0031349,GO:0031430,GO:0031672,GO:0031674,GO:0031965,GO:0031967,GO:0031975,GO:0032101,GO:0032103,GO:0032501,GO:0032502,GO:0032989,GO:0033043,GO:0039531,GO:0039533,GO:0039535,GO:0040011,GO:0042692,GO:0042742,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043122,GO:0043123,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043292,GO:0043900,GO:0043902,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044449,GO:0044464,GO:0045087,GO:0045088,GO:0045089,GO:0045214,GO:0045595,GO:0045596,GO:0045787,GO:0045931,GO:0046530,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048592,GO:0048646,GO:0048699,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0050688,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051093,GO:0051128,GO:0051129,GO:0051146,GO:0051147,GO:0051148,GO:0051150,GO:0051151,GO:0051171,GO:0051239,GO:0051240,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0055001,GO:0055002,GO:0060255,GO:0060361,GO:0060548,GO:0061061,GO:0065007,GO:0070925,GO:0071695,GO:0071840,GO:0072358,GO:0072359,GO:0080090,GO:0080134,GO:0090068,GO:0090596,GO:0097435,GO:0098542,GO:0099080,GO:0099081,GO:0099512,GO:1900087,GO:1900245,GO:1900246,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902531,GO:1902533,GO:1902806,GO:1902808,GO:1903146,GO:1903147,GO:2000045,GO:2000112 - 0.00000000000000000000000000001324 135.0
YYD2_k127_958208_15 Penicillinase repressor - - - 0.00000000000000000000000007576 120.0
YYD2_k127_958208_16 BlaR1 peptidase M56 - - - 0.0000000000000000000000005572 121.0
YYD2_k127_958208_17 Redoxin K03564 - 1.11.1.15 0.0000000001615 65.0
YYD2_k127_958208_2 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 583.0
YYD2_k127_958208_3 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003054 568.0
YYD2_k127_958208_4 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004023 462.0
YYD2_k127_958208_5 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009207 340.0
YYD2_k127_958208_6 COG3209 Rhs family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004382 285.0
YYD2_k127_958208_7 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004047 245.0
YYD2_k127_958208_8 transcriptional regulator K07667 - - 0.000000000000000000000000000000000000000000000000000000000000000001939 236.0
YYD2_k127_958208_9 Histidine kinase K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000005119 227.0
YYD2_k127_96493_0 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000000000000000000000000003475 137.0
YYD2_k127_96493_1 - - - - 0.00005813 55.0
YYD2_k127_971978_0 AAA ATPase domain - - - 3.474e-260 846.0
YYD2_k127_971978_1 ASPIC and UnbV - - - 0.00000000000000006381 86.0
YYD2_k127_982455_0 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002015 254.0
YYD2_k127_982455_1 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001473 232.0
YYD2_k127_982455_2 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000003498 160.0
YYD2_k127_982455_3 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.00000000000000000000000001264 114.0
YYD2_k127_982455_4 - - - - 0.00000000000000000000000004409 109.0
YYD2_k127_982455_5 - - - - 0.000000000000000000002309 98.0
YYD2_k127_982455_6 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000006266 76.0
YYD2_k127_982455_7 - - - - 0.00000000002266 64.0
YYD2_k127_985464_0 pyruvate kinase activity K00873 - 2.7.1.40 2.01e-209 661.0
YYD2_k127_985464_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 596.0
YYD2_k127_985464_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 291.0
YYD2_k127_985464_3 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016020,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0022607,GO:0031323,GO:0031329,GO:0032787,GO:0032991,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0060255,GO:0062012,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.0000000000004592 72.0
YYD2_k127_985464_4 formate acetyltransferase K00656 - 2.3.1.54 0.00000000001446 66.0
YYD2_k127_985464_5 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.0000002462 52.0
YYD2_k127_986375_0 Carboxypeptidase regulatory-like domain - - - 0.000000006026 70.0
YYD2_k127_9990_0 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003023 277.0
YYD2_k127_9990_1 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000008166 257.0
YYD2_k127_9990_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000379 63.0
YYD2_k127_9990_3 Haem-degrading K11477 - - 0.00000001949 63.0