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Overview

ID MAG04636
Name YYD2_bin.16
Sample SMP0125
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Polarisedimenticolia
Order Polarisedimenticolales
Family DASRJG01
Genus DASVAW01
Species DASVAW01 sp036376135
Assembly information
Completeness (%) 81.07
Contamination (%) 3.19
GC content (%) 71.0
N50 (bp) 10,145
Genome size (bp) 3,198,989

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2796

Gene name Description KEGG GOs EC E-value Score Sequence
YYD2_k127_1026317_0 TIGRFAM Na H antiporter, bacterial form K03316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009845 312.0
YYD2_k127_1026317_1 TIGRFAM RarD protein, DMT superfamily transporter K05786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007991 294.0
YYD2_k127_1026317_2 Pfam:DUF2029 - - - 0.00000000000000000000116 103.0
YYD2_k127_1026317_3 - - - - 0.0000000000000001554 92.0
YYD2_k127_1040209_0 Amino acid permease - GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 1.151e-265 833.0
YYD2_k127_1040209_1 TrkA-C domain K03499 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001099 269.0
YYD2_k127_1040209_2 TOBE domain K02017 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000000104 267.0
YYD2_k127_1040209_3 TrkA-N domain K03499,K10716 - - 0.000000000000000000000000000000000000004591 168.0
YYD2_k127_107343_0 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 472.0
YYD2_k127_107343_1 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 470.0
YYD2_k127_107343_2 cellulase activity - - - 0.000000213 64.0
YYD2_k127_1077064_0 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000008753 159.0
YYD2_k127_1077064_1 NmrA-like family - - - 0.000000000000000000000000000000000001233 160.0
YYD2_k127_1077064_2 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000007492 153.0
YYD2_k127_1077064_3 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000002472 126.0
YYD2_k127_1077064_4 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000005194 66.0
YYD2_k127_1100585_0 Peptidase, M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 305.0
YYD2_k127_1100585_1 IgA Peptidase M64 - - - 0.00006247 55.0
YYD2_k127_1111120_0 Protein of unknown function, DUF255 K06888 - - 3.548e-195 629.0
YYD2_k127_1111120_1 PFAM Integral membrane protein TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006997 321.0
YYD2_k127_1111120_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K05886 - 1.1.1.276 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000633 321.0
YYD2_k127_1111120_3 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 329.0
YYD2_k127_1111120_4 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000003438 263.0
YYD2_k127_1111120_5 HD domain - - - 0.000000000000000000000000000006486 136.0
YYD2_k127_1111120_6 - - - - 0.0000000000000000173 87.0
YYD2_k127_1134205_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 351.0
YYD2_k127_1134205_1 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003504 290.0
YYD2_k127_1134205_2 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000003138 211.0
YYD2_k127_1134205_3 Belongs to the sigma-70 factor family K03088 - - 0.00000000000000000007487 104.0
YYD2_k127_114519_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1362.0
YYD2_k127_114519_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 527.0
YYD2_k127_114519_10 Thrombospondin type 3 repeat - - - 0.0000000000000000000001029 115.0
YYD2_k127_114519_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 346.0
YYD2_k127_114519_3 Isoprenylcysteine carboxyl methyltransferase (ICMT) family K21310 - 2.1.1.334 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 332.0
YYD2_k127_114519_4 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000005905 240.0
YYD2_k127_114519_5 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000000000000000000000000000000000000000000000006106 245.0
YYD2_k127_114519_6 cell redox homeostasis - - - 0.0000000000000000000000000000000000000000000000000000000000004394 218.0
YYD2_k127_114519_7 ECF sigma factor - - - 0.0000000000000000000000000000000000000000003576 164.0
YYD2_k127_114519_8 Domain of unknown function (DUF4395) - - - 0.0000000000000000000000000000000000002626 156.0
YYD2_k127_114519_9 AcrB/AcrD/AcrF family K03296 - - 0.0000000000000000000000000000003931 139.0
YYD2_k127_1154325_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1210.0
YYD2_k127_1154325_1 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 455.0
YYD2_k127_1154325_2 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 439.0
YYD2_k127_1154325_3 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 357.0
YYD2_k127_1154325_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004747 333.0
YYD2_k127_1154325_5 Domains HisKA, HATPase_c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000145 257.0
YYD2_k127_1154325_6 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000002157 229.0
YYD2_k127_1154325_7 outer membrane efflux protein - - - 0.00000000000000000000000000003245 135.0
YYD2_k127_1154325_8 (FHA) domain - - - 0.00000000004721 76.0
YYD2_k127_1154325_9 Transcriptional regulator, DeoR family K21601 - - 0.00001474 53.0
YYD2_k127_1157323_0 aromatic amino acid beta-eliminating lyase threonine aldolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007871 410.0
YYD2_k127_1157323_1 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000003805 156.0
YYD2_k127_1157323_2 G-rich domain on putative tyrosine kinase - - - 0.0000000000000003374 85.0
YYD2_k127_1157323_3 Phosphomethylpyrimidine kinase K00877 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008902,GO:0008972,GO:0009056,GO:0009058,GO:0009110,GO:0009111,GO:0009228,GO:0009230,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0016787,GO:0016810,GO:0017144,GO:0018130,GO:0019438,GO:0019439,GO:0034641,GO:0042364,GO:0042365,GO:0042723,GO:0042724,GO:0042725,GO:0042737,GO:0044237,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0050334,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 2.7.1.49,2.7.4.7,3.5.99.2 0.0000000007929 70.0
YYD2_k127_1157323_4 peptidyl-tyrosine sulfation - - - 0.000004553 55.0
YYD2_k127_1157323_5 - - - - 0.000007758 52.0
YYD2_k127_1157323_6 fumarate reductase K00239 - 1.3.5.1,1.3.5.4 0.000008902 55.0
YYD2_k127_1157323_7 S-layer domain protein - - - 0.00006446 52.0
YYD2_k127_1160886_0 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 476.0
YYD2_k127_1160886_1 Threonine synthase K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 414.0
YYD2_k127_1160886_2 PFAM Amidohydrolase 3 - - - 0.000000000000000000000000000000000000000000418 180.0
YYD2_k127_1160886_3 Alpha beta - - - 0.0000000000000000000000000000000178 141.0
YYD2_k127_1160886_4 PFAM 6-pyruvoyl tetrahydropterin K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000002646 120.0
YYD2_k127_1160886_5 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 GO:0003674,GO:0003824,GO:0004150,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016829,GO:0016830,GO:0016832,GO:0044424,GO:0044444,GO:0044464 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000001957 110.0
YYD2_k127_1160886_6 amine dehydrogenase activity - - - 0.0000000006575 74.0
YYD2_k127_117142_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006673 370.0
YYD2_k127_117142_1 Polysaccharide lyase family 4, domain III - - - 0.0000000000000002975 92.0
YYD2_k127_118058_0 Protein of unknown function (DUF2867) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006523 537.0
YYD2_k127_118058_1 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 447.0
YYD2_k127_118058_10 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000001095 136.0
YYD2_k127_118058_11 cyclic nucleotide binding K07058,K14266 - 1.14.19.9 0.000000000000000000000000005675 128.0
YYD2_k127_118058_12 AMP-binding enzyme C-terminal domain K00666 - - 0.0000000000006027 71.0
YYD2_k127_118058_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 406.0
YYD2_k127_118058_3 oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 364.0
YYD2_k127_118058_4 cAMP biosynthetic process K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006177 368.0
YYD2_k127_118058_5 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003815 270.0
YYD2_k127_118058_6 PFAM DGPFAETKE family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003656 242.0
YYD2_k127_118058_7 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003702 249.0
YYD2_k127_118058_8 Uncharacterized ACR, COG1993 K09137 - - 0.000000000000000000000000000000000000000001138 165.0
YYD2_k127_118058_9 DoxX-like family - - - 0.000000000000000000000000000000009083 149.0
YYD2_k127_1204289_0 esterase of the alpha-beta hydrolase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001491 282.0
YYD2_k127_1204289_1 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000003594 220.0
YYD2_k127_1204289_2 PHB/PHA accumulation regulator DNA-binding domain - - - 0.0000000000000000000000006202 110.0
YYD2_k127_1204289_3 Anion-transporting ATPase - - - 0.000000000000000000001635 102.0
YYD2_k127_1204289_4 Poly(hydroxyalcanoate) granule associated protein (phasin) - - - 0.00000000000002273 78.0
YYD2_k127_1212443_0 COG0515 Serine threonine protein K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001965 294.0
YYD2_k127_1212443_1 Putative restriction endonuclease - - - 0.0000000000000000000000000000000000000001595 160.0
YYD2_k127_1212443_2 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000003119 156.0
YYD2_k127_1212443_3 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000002197 130.0
YYD2_k127_1212443_4 - - - - 0.00000000000000000000000006064 122.0
YYD2_k127_1212443_5 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 0.000000000000001089 78.0
YYD2_k127_1217054_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 8.211e-208 652.0
YYD2_k127_1217054_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 567.0
YYD2_k127_1217054_10 Domain of unknown function (DUF4349) - - - 0.000000000000000002785 95.0
YYD2_k127_1217054_11 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000001116 81.0
YYD2_k127_1217054_12 - - - - 0.0000000715 55.0
YYD2_k127_1217054_13 PFAM Septum formation initiator K05589 - - 0.000001305 57.0
YYD2_k127_1217054_14 Mo-molybdopterin cofactor metabolic process K03753,K07588 - - 0.000008071 55.0
YYD2_k127_1217054_15 NYN domain - - - 0.0001056 46.0
YYD2_k127_1217054_2 cystathionine gamma-synthase activity K01739,K01758,K01760,K01761 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004121,GO:0004123,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48,4.4.1.1,4.4.1.11,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005661 465.0
YYD2_k127_1217054_3 Peptidase family M20/M25/M40 K01270 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000569 457.0
YYD2_k127_1217054_5 MoaC family K03637 - 4.6.1.17 0.00000000000000000000000000000000000000003499 165.0
YYD2_k127_1217054_6 Protein conserved in bacteria K09931 - - 0.00000000000000000000000000000000089 142.0
YYD2_k127_1217054_7 protein involved in tolerance to divalent cations K03926 - - 0.0000000000000000000000000002367 117.0
YYD2_k127_1217054_8 transposition, DNA-mediated K02342 - 2.7.7.7 0.000000000000000000000002784 115.0
YYD2_k127_1217054_9 translation initiation factor activity K03699 - - 0.000000000000000000000006385 114.0
YYD2_k127_123133_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006076 525.0
YYD2_k127_123133_1 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 450.0
YYD2_k127_123133_10 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.000004449 53.0
YYD2_k127_123133_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 360.0
YYD2_k127_123133_3 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000002542 238.0
YYD2_k127_123133_4 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000116 229.0
YYD2_k127_123133_5 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000005979 199.0
YYD2_k127_123133_6 3-dehydroquinate dehydratase activity K00014,K03785,K13832 GO:0000166,GO:0003674,GO:0003824,GO:0003855,GO:0004764,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006725,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009712,GO:0009713,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018958,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0042537,GO:0042802,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046189,GO:0046278,GO:0046279,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901615,GO:1901617 1.1.1.25,4.2.1.10 0.000000000000000000000000000000000000000000004245 189.0
YYD2_k127_123133_7 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.0000000000000000000000000000000000000000006392 174.0
YYD2_k127_123133_8 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000004567 150.0
YYD2_k127_123133_9 extracellular solute-binding protein, family 1 K02012 - - 0.00000000001198 64.0
YYD2_k127_1268333_0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01585 - 4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004059 615.0
YYD2_k127_1268333_1 SAM-dependent methyltransferase K06967 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016429,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.217 0.0000000000000000000004705 105.0
YYD2_k127_1268333_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000006792 48.0
YYD2_k127_128326_0 Sodium Bile acid symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007811 501.0
YYD2_k127_128326_1 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 458.0
YYD2_k127_128326_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 300.0
YYD2_k127_128326_3 Cytochrome C biogenesis protein - - - 0.00000000000000000000000000000000000000000000000000000000003693 219.0
YYD2_k127_128326_4 COG0526, thiol-disulfide isomerase and thioredoxins K02199 - - 0.0000000000000000000001506 112.0
YYD2_k127_128326_5 redox-active disulfide protein 2 - - - 0.00000000000000005707 92.0
YYD2_k127_128326_6 - - - - 0.00000001886 65.0
YYD2_k127_1288755_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009179 557.0
YYD2_k127_1288755_1 SMART helicase c2 K03722 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009007 539.0
YYD2_k127_1288755_2 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000003522 175.0
YYD2_k127_1288755_3 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000009065 175.0
YYD2_k127_1301872_0 Glutathione S-transferase, C-terminal domain K11209 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005307 254.0
YYD2_k127_1301872_1 DoxX K15977 - - 0.00000000000000000000000000001422 123.0
YYD2_k127_1301872_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.000000000000000001879 93.0
YYD2_k127_1309373_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1595.0
YYD2_k127_1309373_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009681 440.0
YYD2_k127_1309373_2 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.00000000000000000000000000000000000000000000000000000000003186 227.0
YYD2_k127_1309373_3 short-chain dehydrogenase - - - 0.000000000000000000000000000000001089 132.0
YYD2_k127_1315422_0 PFAM DSBA-like thioredoxin domain - - - 0.000000000000000000000006379 103.0
YYD2_k127_1315422_2 - - - - 0.0000006101 59.0
YYD2_k127_1315422_3 Right handed beta helix region - - - 0.00005392 54.0
YYD2_k127_1323476_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 447.0
YYD2_k127_1323476_1 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 378.0
YYD2_k127_1323476_2 epimerase K07071 - - 0.0000000000000000000000000000000000000000000000000004706 189.0
YYD2_k127_1323476_3 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000003869 168.0
YYD2_k127_1323476_4 Insulinase (Peptidase family M16) K07263,K07623 - - 0.00000000000001048 89.0
YYD2_k127_1323476_5 Bacterial PH domain - - - 0.0001634 54.0
YYD2_k127_1337406_0 cellulose binding - - - 1.142e-214 671.0
YYD2_k127_1337406_1 transcription factor binding K15836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004143 586.0
YYD2_k127_1337406_10 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.00000000000000000000000000005348 136.0
YYD2_k127_1337406_11 GDYXXLXY protein - - - 0.0000000000000000000001812 113.0
YYD2_k127_1337406_12 - - - - 0.000000000001953 81.0
YYD2_k127_1337406_13 Psort location CytoplasmicMembrane, score 9.46 - - - 0.0001598 51.0
YYD2_k127_1337406_2 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 569.0
YYD2_k127_1337406_3 PFAM UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005083 477.0
YYD2_k127_1337406_4 TIGRFAM intracellular protease, PfpI family K05520 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 315.0
YYD2_k127_1337406_5 Predicted membrane protein (DUF2157) - - - 0.0000000000000000000000000000000000000000000000000000000762 212.0
YYD2_k127_1337406_6 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000000005124 216.0
YYD2_k127_1337406_7 PFAM OsmC family protein K04063 - - 0.00000000000000000000000000000000000000000000000000001637 191.0
YYD2_k127_1337406_8 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000001935 207.0
YYD2_k127_1337406_9 FR47-like protein - - - 0.00000000000000000000000000000000000000000007602 177.0
YYD2_k127_1341006_0 Cytochrome c-type biogenesis protein CcmF C-terminal K02198 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 522.0
YYD2_k127_1341006_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005337 316.0
YYD2_k127_1341006_10 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000003189 127.0
YYD2_k127_1341006_11 Domain of unknown function (DUF4388) K03413 - - 0.0000000000000000000000000000008188 141.0
YYD2_k127_1341006_12 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000001833 105.0
YYD2_k127_1341006_13 subunit of a heme lyase K02200 - - 0.00000000009342 69.0
YYD2_k127_1341006_14 - - - - 0.00002687 54.0
YYD2_k127_1341006_2 Asparaginase K01424 - 3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009587 277.0
YYD2_k127_1341006_3 metal-dependent phosphohydrolase HD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002275 269.0
YYD2_k127_1341006_4 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000001871 271.0
YYD2_k127_1341006_5 UbiA prenyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001613 255.0
YYD2_k127_1341006_6 ABC transporter K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000000003188 223.0
YYD2_k127_1341006_7 Cytochrome C assembly protein K02195 GO:0001539,GO:0002048,GO:0002049,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006518,GO:0006629,GO:0006643,GO:0006664,GO:0006807,GO:0006810,GO:0006928,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009237,GO:0009247,GO:0009636,GO:0009987,GO:0015886,GO:0016020,GO:0016021,GO:0016209,GO:0016491,GO:0016684,GO:0019184,GO:0019290,GO:0019748,GO:0031224,GO:0031226,GO:0034641,GO:0040011,GO:0042221,GO:0043043,GO:0043107,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044425,GO:0044459,GO:0044464,GO:0044550,GO:0046467,GO:0048870,GO:0050896,GO:0051179,GO:0051181,GO:0051186,GO:0051188,GO:0051234,GO:0051674,GO:0051716,GO:0055114,GO:0070887,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0071973,GO:0071975,GO:0071977,GO:0071978,GO:0097237,GO:0097588,GO:0098754,GO:0098869,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901678,GO:1903509,GO:1990748 - 0.000000000000000000000000000000000000000000000000000000005379 206.0
YYD2_k127_1341006_8 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000001886 175.0
YYD2_k127_1341006_9 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.000000000000000000000000000000005303 144.0
YYD2_k127_1355394_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 500.0
YYD2_k127_1355394_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006987 474.0
YYD2_k127_1355394_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000001766 149.0
YYD2_k127_1355394_11 bacteriocin transport K03561 - - 0.00000000000000000000000000000003768 141.0
YYD2_k127_1355394_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000001956 113.0
YYD2_k127_1355394_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000006325 110.0
YYD2_k127_1355394_14 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000003268 106.0
YYD2_k127_1355394_15 TonB family K03832 - - 0.00000001059 67.0
YYD2_k127_1355394_16 Protein kinase domain - - - 0.0000007832 62.0
YYD2_k127_1355394_17 Yip1 domain - - - 0.000006414 57.0
YYD2_k127_1355394_2 formate dehydrogenase (NAD+) activity K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 413.0
YYD2_k127_1355394_3 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 347.0
YYD2_k127_1355394_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 352.0
YYD2_k127_1355394_5 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 314.0
YYD2_k127_1355394_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003174 264.0
YYD2_k127_1355394_7 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000006121 250.0
YYD2_k127_1355394_8 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000001559 198.0
YYD2_k127_1355394_9 2 iron, 2 sulfur cluster binding K00334,K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000001053 188.0
YYD2_k127_1376692_0 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002918 257.0
YYD2_k127_1376692_1 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000001671 239.0
YYD2_k127_1376692_2 Mitochondrial biogenesis AIM24 - - - 0.00000000000004569 72.0
YYD2_k127_1392678_0 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01667 - 4.1.99.1 3.312e-197 624.0
YYD2_k127_1392678_1 [isocitrate dehydrogenase (NADP+)] phosphatase activity K00906 GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004721,GO:0004722,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008772,GO:0009060,GO:0009987,GO:0015980,GO:0016208,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0016999,GO:0017076,GO:0017144,GO:0018105,GO:0018193,GO:0018209,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0035639,GO:0036094,GO:0036211,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046487,GO:0050790,GO:0055114,GO:0065007,GO:0065009,GO:0070262,GO:0071704,GO:0072350,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.11.5 0.00000000000000000006768 102.0
YYD2_k127_1392678_3 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0005125 49.0
YYD2_k127_1407330_0 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001211 276.0
YYD2_k127_1407330_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000361 261.0
YYD2_k127_1407330_2 acetyltransferase - - - 0.00000000000000000000000000000000000000001133 169.0
YYD2_k127_1410275_0 GlcNAc-PI de-N-acetylase - - - 4.631e-226 742.0
YYD2_k127_1410275_1 Sodium:solute symporter family - - - 4.676e-206 657.0
YYD2_k127_1410275_10 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog - - - 0.000000000000000000000000000000000005743 158.0
YYD2_k127_1410275_11 domain, Protein K03615,K09690 - - 0.00000000000000000000000003125 127.0
YYD2_k127_1410275_12 C-terminal domain of 1-Cys peroxiredoxin - - - 0.00000000000003623 74.0
YYD2_k127_1410275_2 Glycosyl transferase 4-like K00754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 346.0
YYD2_k127_1410275_3 Bacillithiol biosynthesis BshC K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008865 344.0
YYD2_k127_1410275_4 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 347.0
YYD2_k127_1410275_5 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000905 279.0
YYD2_k127_1410275_6 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006802 269.0
YYD2_k127_1410275_7 GlcNAc-PI de-N-acetylase K01463 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000547 273.0
YYD2_k127_1410275_8 SMART Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000004209 235.0
YYD2_k127_1410275_9 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000000000000000000000009908 187.0
YYD2_k127_14179_0 DAHP synthetase I family K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008255 519.0
YYD2_k127_14179_1 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 428.0
YYD2_k127_14179_2 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity K06188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004425 375.0
YYD2_k127_14179_3 Prephenate dehydrogenase chorismate mutase K00210 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005422 347.0
YYD2_k127_14179_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000131 257.0
YYD2_k127_14179_5 uridine kinase K00876 - 2.7.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000004944 248.0
YYD2_k127_14179_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000003899 169.0
YYD2_k127_14179_7 Antibiotic biosynthesis monooxygenase K06996,K21481 - 1.14.99.57 0.00000000000000000000000002172 111.0
YYD2_k127_1424967_0 Glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 1.932e-292 938.0
YYD2_k127_1424967_1 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000036 225.0
YYD2_k127_1424967_2 Protease prsW family - - - 0.0000000000000000000000000000000002102 147.0
YYD2_k127_1441977_0 DNA polymerase K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 565.0
YYD2_k127_1441977_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000004781 243.0
YYD2_k127_1441977_2 O-methyltransferase - - - 0.000000000000000000000000000000000000000000006197 171.0
YYD2_k127_1441977_3 PFAM bifunctional deaminase-reductase domain protein K14654 - 1.1.1.302 0.0000000000000000000000000000000000000000002377 173.0
YYD2_k127_1441977_4 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000004874 162.0
YYD2_k127_1441977_5 Tellurite resistance protein TehB - - - 0.00000000000000000000000000000000005012 145.0
YYD2_k127_1441977_6 Aminoglycoside phosphotransferase - - - 0.00000000000000000006546 95.0
YYD2_k127_1441977_7 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000001957 87.0
YYD2_k127_1441977_8 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000001016 85.0
YYD2_k127_1441977_9 Thiol peroxidase K03564 - 1.11.1.15 0.00000004236 59.0
YYD2_k127_1454108_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 549.0
YYD2_k127_1454108_1 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000071 374.0
YYD2_k127_1454108_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000005998 147.0
YYD2_k127_1454108_3 - - - - 0.0000000000000001002 90.0
YYD2_k127_1454108_4 SMART Tetratricopeptide - - - 0.000000000000003901 83.0
YYD2_k127_1454108_5 Tetratricopeptide repeat - - - 0.00000001794 65.0
YYD2_k127_1454108_6 protein kinase activity K08884 - 2.7.11.1 0.000002641 51.0
YYD2_k127_1467360_0 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 318.0
YYD2_k127_1474378_0 Dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004472 424.0
YYD2_k127_1474378_1 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 405.0
YYD2_k127_1474378_2 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000008025 214.0
YYD2_k127_1474378_3 binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000008473 143.0
YYD2_k127_1474378_4 - - - - 0.000000000125 68.0
YYD2_k127_1474378_5 VanZ like family - - - 0.0003508 50.0
YYD2_k127_1485108_0 ABC transporter K06147,K18890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005791 514.0
YYD2_k127_1485108_1 ABC transporter transmembrane region K06147,K18889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000517 362.0
YYD2_k127_1485108_2 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000000000000001446 181.0
YYD2_k127_1485108_3 FMN binding K03612 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000007593 119.0
YYD2_k127_1485108_4 Transport and Golgi organisation 2 - - - 0.0000000000000000003247 101.0
YYD2_k127_1489731_0 PFAM Glutamyl glutaminyl-tRNA synthetase, class Ic, catalytic K01886 - 6.1.1.18 2.549e-252 789.0
YYD2_k127_1489731_1 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II K01840,K15778 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003129 603.0
YYD2_k127_1489731_10 RESPONSE REGULATOR receiver - - - 0.0000000001155 69.0
YYD2_k127_1489731_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 489.0
YYD2_k127_1489731_3 Fumarase C C-terminus K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 435.0
YYD2_k127_1489731_4 alcohol dehydrogenase K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004408 384.0
YYD2_k127_1489731_5 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 365.0
YYD2_k127_1489731_6 histidine kinase A domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004537 331.0
YYD2_k127_1489731_7 FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000004264 271.0
YYD2_k127_1489731_8 Predicted integral membrane protein (DUF2270) - - - 0.0000000000000000000000000000000000000000005372 170.0
YYD2_k127_1489731_9 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000003269 117.0
YYD2_k127_1503892_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07788,K07789,K18138 - - 2.527e-283 919.0
YYD2_k127_1503892_1 belongs to the sigma-70 factor family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 420.0
YYD2_k127_1503892_10 sterol carrier protein - - - 0.00000002063 67.0
YYD2_k127_1503892_2 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004267 368.0
YYD2_k127_1503892_3 PFAM peptidase M48 Ste24p - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 368.0
YYD2_k127_1503892_4 FAD binding domain K00103,K00279 - 1.1.3.8,1.5.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004051 306.0
YYD2_k127_1503892_5 outer membrane efflux protein - - - 0.000000000000000000000000000000000000000002079 177.0
YYD2_k127_1503892_6 YCII-related domain - - - 0.00000000000000000000000000000000000000006137 154.0
YYD2_k127_1503892_7 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000001541 147.0
YYD2_k127_1503892_8 Transcriptional regulator - - - 0.0000000000000000000005696 104.0
YYD2_k127_1525191_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 397.0
YYD2_k127_1525191_1 PFAM Type II secretion system protein E K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000914 329.0
YYD2_k127_1525191_2 Gamma-glutamyltranspeptidase K00681 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006082,GO:0006508,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0019538,GO:0019752,GO:0030288,GO:0030313,GO:0031975,GO:0034722,GO:0036374,GO:0042597,GO:0043094,GO:0043102,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070011,GO:0071704,GO:0097264,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000005633 255.0
YYD2_k127_1525191_3 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000002316 172.0
YYD2_k127_1525191_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.000000000000000000000000000000000001122 146.0
YYD2_k127_1525191_5 Peptidase MA superfamily - - - 0.000000000000000000000000000000006362 147.0
YYD2_k127_1525191_6 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000001256 111.0
YYD2_k127_1525191_7 heat shock protein binding K05516,K05801 - - 0.0000000000004284 83.0
YYD2_k127_1525191_8 YacP-like NYN domain K06962 - - 0.0006718 52.0
YYD2_k127_1583431_0 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000276 247.0
YYD2_k127_1583431_1 lipid A biosynthesis acyltransferase - - - 0.00000000000000000009107 104.0
YYD2_k127_1583431_2 FabA-like domain - - - 0.0000000208 64.0
YYD2_k127_1583431_3 MMPL family K07003 - - 0.0000006587 62.0
YYD2_k127_1583431_4 domain protein K13735 - - 0.0001224 56.0
YYD2_k127_1600937_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 549.0
YYD2_k127_1600937_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004728 421.0
YYD2_k127_1600937_10 Tetratricopeptide repeat - - - 0.0000008971 62.0
YYD2_k127_1600937_11 Psort location CytoplasmicMembrane, score - - - 0.0008761 50.0
YYD2_k127_1600937_2 Ftsk_gamma K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 445.0
YYD2_k127_1600937_3 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004408 323.0
YYD2_k127_1600937_4 von Willebrand factor (vWF) type A domain K07114,K12511 - - 0.0000000000000000000000000000000000000000000000000000000000006272 240.0
YYD2_k127_1600937_5 P2 response regulator binding domain K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000034 234.0
YYD2_k127_1600937_6 von Willebrand factor (vWF) type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000008676 214.0
YYD2_k127_1600937_7 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.00000000000000000000000000000000000000000000000000002542 197.0
YYD2_k127_1600937_8 Oxygen tolerance - - - 0.000000000000000000000000000000000000000000398 182.0
YYD2_k127_1600937_9 Methyl-accepting chemotaxis protein K03406 - - 0.000000000002457 78.0
YYD2_k127_1620542_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 387.0
YYD2_k127_1620542_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008238 372.0
YYD2_k127_1620542_10 Competence protein - - - 0.000000000000000000000000008824 120.0
YYD2_k127_1620542_11 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000002798 117.0
YYD2_k127_1620542_12 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000003204 121.0
YYD2_k127_1620542_13 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767 - 5.2.1.8 0.000000000000000000000004235 117.0
YYD2_k127_1620542_14 Belongs to the peptidase S8 family - - - 0.0001724 51.0
YYD2_k127_1620542_2 ADP-ribosylation factor family K06883 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 304.0
YYD2_k127_1620542_3 Sigma-54 interaction domain K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002132 261.0
YYD2_k127_1620542_4 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000003271 202.0
YYD2_k127_1620542_5 Roadblock/LC7 domain - - - 0.0000000000000000000000000000000000000000000000000000004836 197.0
YYD2_k127_1620542_6 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000002417 190.0
YYD2_k127_1620542_7 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.000000000000000000000000000000000025 136.0
YYD2_k127_1620542_8 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000002358 147.0
YYD2_k127_1620542_9 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.000000000000000000000000000006989 121.0
YYD2_k127_1637454_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 3.622e-232 737.0
YYD2_k127_1637454_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005857 452.0
YYD2_k127_1637454_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 439.0
YYD2_k127_1637454_3 TIGRFAM carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 439.0
YYD2_k127_1637454_4 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005616 420.0
YYD2_k127_1637454_5 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001691 289.0
YYD2_k127_1637454_6 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000000000000000000000000000000000000004607 209.0
YYD2_k127_1637454_7 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000001113 155.0
YYD2_k127_1637454_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.000000009225 68.0
YYD2_k127_1637454_9 - - - - 0.00000168 61.0
YYD2_k127_1641038_0 Elongation factor G, domain IV K02355 - - 4.169e-226 721.0
YYD2_k127_1641038_1 Asparaginyl-tRNA synthetase K01893 GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 557.0
YYD2_k127_1641038_10 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000001045 110.0
YYD2_k127_1641038_11 peptidase M48, Ste24p - - - 0.0000000001445 74.0
YYD2_k127_1641038_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 367.0
YYD2_k127_1641038_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007371 365.0
YYD2_k127_1641038_4 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 381.0
YYD2_k127_1641038_5 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 304.0
YYD2_k127_1641038_6 Protein of unknown function (DUF2400) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008298 250.0
YYD2_k127_1641038_7 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000001181 248.0
YYD2_k127_1641038_8 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.000000000000000000000000000000000000000000000000000000197 215.0
YYD2_k127_1641038_9 DNA polymerase III K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000003565 185.0
YYD2_k127_1649462_0 Amidohydrolase family K01443 - 3.5.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 479.0
YYD2_k127_1649462_1 imidazolonepropionase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006379 344.0
YYD2_k127_1653395_0 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000002381 167.0
YYD2_k127_1653395_1 Transglycosylase SLT domain K08309 - - 0.000000000000000000000000000006063 127.0
YYD2_k127_1653395_2 cellulase activity - - - 0.00000000000002182 79.0
YYD2_k127_1653395_3 beta-lactamase domain protein - - - 0.00000000000006406 85.0
YYD2_k127_1666787_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 1.398e-313 982.0
YYD2_k127_1666787_1 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000741 49.0
YYD2_k127_1670113_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.293e-233 747.0
YYD2_k127_1670113_1 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003579 518.0
YYD2_k127_1670113_2 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009972 341.0
YYD2_k127_1670113_3 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 338.0
YYD2_k127_1670113_4 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000001947 237.0
YYD2_k127_1670113_5 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 - 3.1.3.45 0.000000000000000000000000000000000001551 158.0
YYD2_k127_1670397_0 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 459.0
YYD2_k127_1670397_1 COG3119 Arylsulfatase A and related enzymes - - - 0.0000000000000000000000000000000000000000000000000000000009175 231.0
YYD2_k127_1670397_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000001919 91.0
YYD2_k127_1670397_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000003854 55.0
YYD2_k127_1670397_4 oligosaccharyl transferase activity - - - 0.0002722 51.0
YYD2_k127_1694047_0 Dehydrogenase E1 component K11381 - 1.2.4.4 3.363e-207 659.0
YYD2_k127_1694047_1 Pyridoxal-dependent decarboxylase conserved domain K01593 - 4.1.1.105,4.1.1.28 1.03e-206 652.0
YYD2_k127_1694047_2 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 307.0
YYD2_k127_1694047_3 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000001572 237.0
YYD2_k127_1694047_4 - - - - 0.00000000000000000000000000000000000000000000000005723 192.0
YYD2_k127_1694047_5 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000008561 199.0
YYD2_k127_1694047_6 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 0.00000000000000000000000000000000000000000000004853 183.0
YYD2_k127_1694047_7 RNA recognition motif - - - 0.00000000000000000000000000002806 121.0
YYD2_k127_1694047_8 Glycosyl transferase, family 2 - - - 0.00000005064 59.0
YYD2_k127_1694929_0 Nitronate monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 561.0
YYD2_k127_1694929_1 PFAM RNA binding S1 domain protein K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007911 335.0
YYD2_k127_1694929_2 Penicillin binding protein transpeptidase domain K17838 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000005497 253.0
YYD2_k127_1694929_3 HicA toxin of bacterial toxin-antitoxin, - - - 0.0000000000000001794 83.0
YYD2_k127_1694929_4 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000001109 72.0
YYD2_k127_1694929_5 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.000003718 57.0
YYD2_k127_1694929_7 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0003277 47.0
YYD2_k127_1699315_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008855 486.0
YYD2_k127_1699315_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007867 362.0
YYD2_k127_1699315_2 Putative esterase K07017 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006238 265.0
YYD2_k127_1699315_3 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000000001358 251.0
YYD2_k127_1699315_4 Protein of unknown function (DUF533) - - - 0.000000000000362 83.0
YYD2_k127_1699315_5 Rhomboid family K19225 - 3.4.21.105 0.000000000003495 77.0
YYD2_k127_1699315_6 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000009657 66.0
YYD2_k127_1699315_7 - - - - 0.0000000006353 68.0
YYD2_k127_1705503_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 518.0
YYD2_k127_1705503_1 gluconolactonase K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 353.0
YYD2_k127_1705503_2 AbgT putative transporter family K12942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009062 314.0
YYD2_k127_1711760_0 PFAM Transglycosylase SLT domain K08309 - - 0.0000000000000000000009303 98.0
YYD2_k127_1711760_1 lipolytic protein G-D-S-L family K20306 - - 0.0000000000000000003813 100.0
YYD2_k127_1711760_2 oligosaccharyl transferase activity - - - 0.00000000000575 76.0
YYD2_k127_1717085_0 Protein kinase domain K12132 - 2.7.11.1 1.255e-233 751.0
YYD2_k127_1717085_1 Berberine and berberine like - - - 1.37e-212 675.0
YYD2_k127_1717085_12 peroxiredoxin activity - - - 0.0000000000000000000000000000001236 133.0
YYD2_k127_1717085_13 - - - - 0.00000000000000000000000000007935 124.0
YYD2_k127_1717085_14 Domain of unknown function (DUF4382) - - - 0.0000000000004224 78.0
YYD2_k127_1717085_15 IgA Peptidase M64 - - - 0.00000000003078 76.0
YYD2_k127_1717085_2 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 591.0
YYD2_k127_1717085_3 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004117 420.0
YYD2_k127_1717085_4 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 379.0
YYD2_k127_1717085_5 Protein involved in meta-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009641 373.0
YYD2_k127_1717085_6 protein kinase activity K01972,K02342,K04096 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 2.7.7.7,6.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006437 353.0
YYD2_k127_1717085_7 Biotin-lipoyl like K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 302.0
YYD2_k127_1717085_8 Esterase-like activity of phytase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000007623 291.0
YYD2_k127_1717085_9 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000001563 227.0
YYD2_k127_1730076_0 COG1131 ABC-type multidrug transport system, ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002245 294.0
YYD2_k127_1730076_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002108 277.0
YYD2_k127_1730076_2 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000008327 245.0
YYD2_k127_1730076_3 ABC-type multidrug transport system, permease component K01992 - - 0.000000000000000000000000000000004201 149.0
YYD2_k127_1730076_4 ABC-2 family transporter protein K01992 - - 0.0000000000000000002693 101.0
YYD2_k127_1730076_5 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases K00320 - 1.5.98.2 0.00000000000959 67.0
YYD2_k127_1730076_6 Thioredoxin-like - - - 0.000002343 51.0
YYD2_k127_1742636_0 Inositol monophosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 306.0
YYD2_k127_1742636_1 OsmC-like protein - - - 0.000000000000000000000000000000000005705 141.0
YYD2_k127_1745481_0 protein phosphatase 2C domain protein K01090,K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000003103 212.0
YYD2_k127_1745481_1 - - - - 0.0000000000001123 74.0
YYD2_k127_1745481_2 tetratricopeptide repeat - - - 0.000000000001902 79.0
YYD2_k127_1745481_3 Cna B domain protein - - - 0.00007327 55.0
YYD2_k127_1745510_0 Saccharopine dehydrogenase NADP binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006977 323.0
YYD2_k127_1745510_1 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000041 307.0
YYD2_k127_1745510_2 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000007823 223.0
YYD2_k127_1753647_0 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000000003303 64.0
YYD2_k127_1753647_1 Carboxypeptidase regulatory-like domain - - - 0.000000003949 69.0
YYD2_k127_1824616_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 572.0
YYD2_k127_1824616_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 532.0
YYD2_k127_1824616_10 Type ii and iii secretion system protein K02453 - - 0.0000000000000000000000000000000000000000008095 173.0
YYD2_k127_1824616_11 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000000007828 135.0
YYD2_k127_1824616_12 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000002614 138.0
YYD2_k127_1824616_13 general secretion pathway protein K02456 - - 0.000000000000000000000000000001152 127.0
YYD2_k127_1824616_14 - - - - 0.00000003519 64.0
YYD2_k127_1824616_2 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 398.0
YYD2_k127_1824616_3 Belongs to the peptidase M16 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 392.0
YYD2_k127_1824616_4 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 387.0
YYD2_k127_1824616_5 Formyl transferase K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000008064 229.0
YYD2_k127_1824616_6 response regulator K02477 - - 0.0000000000000000000000000000000000000000000000000000000000003274 228.0
YYD2_k127_1824616_7 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000004061 222.0
YYD2_k127_1824616_8 beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000001527 215.0
YYD2_k127_1824616_9 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000004412 196.0
YYD2_k127_1829283_0 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 429.0
YYD2_k127_1829283_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000603 352.0
YYD2_k127_1829283_2 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.00000000000000000000000000000000000000000000006078 187.0
YYD2_k127_1829283_3 DSBA-like thioredoxin domain - - - 0.0000000009723 70.0
YYD2_k127_1844055_0 HD domain - - - 0.000000000000000000000000000000000000005122 165.0
YYD2_k127_1844055_1 Helicase - - - 0.0000000000000000000000001369 107.0
YYD2_k127_1844055_2 Outer membrane protein beta-barrel domain - - - 0.0001721 50.0
YYD2_k127_1849260_0 Belongs to the thiolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 458.0
YYD2_k127_1849260_1 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 419.0
YYD2_k127_1849260_10 phosphotransferase related to Ser Thr protein kinases K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000005581 189.0
YYD2_k127_1849260_11 PFAM periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000008821 185.0
YYD2_k127_1849260_12 Outer membrane receptor proteins mostly Fe transport K02014 - - 0.000000000000000000000000000000000000000000000000995 198.0
YYD2_k127_1849260_13 Carbon-nitrogen hydrolase K03820 - - 0.0000000000000000000000000000000000000002978 172.0
YYD2_k127_1849260_14 COGs COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.000000000000000000000000000000000000005665 164.0
YYD2_k127_1849260_15 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000002092 165.0
YYD2_k127_1849260_16 Nucleotidyl transferase K00966 - 2.7.7.13 0.00000000000000000000000000000000000127 157.0
YYD2_k127_1849260_17 modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000004801 152.0
YYD2_k127_1849260_18 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.00000000000000000000000000000007804 139.0
YYD2_k127_1849260_19 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000004129 132.0
YYD2_k127_1849260_2 Carboxyl transferase domain K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 359.0
YYD2_k127_1849260_20 CYTH K05873 - 4.6.1.1 0.000000000000000000000000000006916 125.0
YYD2_k127_1849260_21 Has nucleotide phosphatase activity towards ATP, GTP, CTP, TTP and UTP. May hydrolyze nucleoside diphosphates with lower efficiency K06928 - 3.6.1.15 0.00000000000000000000003485 109.0
YYD2_k127_1849260_22 Protein of unknown function, DUF393 - - - 0.000000000000000000006705 102.0
YYD2_k127_1849260_23 phosphorelay signal transduction system - - - 0.000000000000000002803 100.0
YYD2_k127_1849260_24 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000001826 71.0
YYD2_k127_1849260_25 Cytochrome C biogenesis protein - - - 0.00001961 57.0
YYD2_k127_1849260_26 PFAM ATP-binding region ATPase domain protein - - - 0.0003376 52.0
YYD2_k127_1849260_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 342.0
YYD2_k127_1849260_4 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000001593 269.0
YYD2_k127_1849260_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003973 279.0
YYD2_k127_1849260_6 PFAM cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000000000001131 263.0
YYD2_k127_1849260_7 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000005276 230.0
YYD2_k127_1849260_8 ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000001207 225.0
YYD2_k127_1849260_9 RNase_H superfamily K07502 - - 0.000000000000000000000000000000000000000000000000000003985 200.0
YYD2_k127_1869142_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 7.575e-205 651.0
YYD2_k127_1869142_1 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003628 268.0
YYD2_k127_1869142_2 SelR domain K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000001444 211.0
YYD2_k127_1869142_3 LPXTG-motif cell wall anchor domain - - - 0.0000000000000000000000000000000000000000000000000001238 194.0
YYD2_k127_1869142_4 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - - - 0.00000000000000000000000000000000000000000000000261 192.0
YYD2_k127_1869142_5 Belongs to the P-Pant transferase superfamily K06133 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008897,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0019752,GO:0019878,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.0000000000000000000000000000000000000000009765 167.0
YYD2_k127_1892508_0 UDP-N-acetylmuramate-L-alanine ligase activity K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003323 546.0
YYD2_k127_1892508_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0030554,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 483.0
YYD2_k127_1892508_2 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006706 410.0
YYD2_k127_1892508_3 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000002346 259.0
YYD2_k127_1892508_4 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003251 255.0
YYD2_k127_1892508_5 Belongs to the SEDS family K03588 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000001369 222.0
YYD2_k127_1892508_6 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.000525 51.0
YYD2_k127_1901289_0 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005875 289.0
YYD2_k127_1901289_1 C-terminal domain of CHU protein family - - - 0.000000001352 72.0
YYD2_k127_1901289_2 cellulase activity K20276 - - 0.00001569 59.0
YYD2_k127_1917583_0 Alpha/beta hydrolase family - - - 9.752e-242 760.0
YYD2_k127_1917583_1 Putative esterase K07214 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0008150,GO:0008152,GO:0008849,GO:0009056,GO:0009237,GO:0009238,GO:0009712,GO:0009987,GO:0016787,GO:0016788,GO:0018958,GO:0019336,GO:0019439,GO:0019614,GO:0019748,GO:0044237,GO:0044248,GO:0044424,GO:0044464,GO:0046214,GO:0046215,GO:0046483,GO:0046700,GO:0051186,GO:0051187,GO:0071704,GO:0090487,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616 - 0.00000000000000000000000000000000000000000000002867 182.0
YYD2_k127_192122_0 PFAM NAD-dependent epimerase dehydratase K01710,K08678 - 4.1.1.35,4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 479.0
YYD2_k127_192122_1 inositol 2-dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 387.0
YYD2_k127_192122_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000873 311.0
YYD2_k127_192122_3 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000001018 208.0
YYD2_k127_192122_4 protein conserved in bacteria K09778 - - 0.0000000000000000000000000000000000000000000000001424 186.0
YYD2_k127_192122_5 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000001761 137.0
YYD2_k127_192122_6 Domain of unknown function (DUF1732) - - - 0.0000000000000000000000000005942 122.0
YYD2_k127_192122_7 Uncharacterised nucleotidyltransferase - - - 0.000001089 63.0
YYD2_k127_192122_8 Glycosyl transferases group 1 K00786 - - 0.00003259 46.0
YYD2_k127_1940571_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009469 378.0
YYD2_k127_1940571_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000203 58.0
YYD2_k127_1960766_0 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 443.0
YYD2_k127_1960766_1 Calcineurin-like phosphoesterase K07099 - - 0.00000000000000000000000000000000000000000000000000000002717 223.0
YYD2_k127_1960766_2 PFAM ATP-binding region ATPase domain protein K07709 - 2.7.13.3 0.0000000000000000000000000000000000001369 164.0
YYD2_k127_1960766_3 Predicted ATPase of the ABC class - - - 0.00000004857 57.0
YYD2_k127_196515_0 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 331.0
YYD2_k127_196515_1 CobQ CobB MinD ParA nucleotide binding domain K08252,K13661,K16554,K16692 - 2.7.10.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 318.0
YYD2_k127_196515_2 Heparinase II/III N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002321 298.0
YYD2_k127_196515_3 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000000000000000001528 269.0
YYD2_k127_196515_4 Periplasmic protein involved in polysaccharide export K01991 - - 0.00000000000000002491 96.0
YYD2_k127_196515_5 - - - - 0.00000000001327 78.0
YYD2_k127_1976023_0 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002704 253.0
YYD2_k127_1976023_1 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.00000000000000000000000000000000000004735 154.0
YYD2_k127_1976023_2 FtsX-like permease family K02004 - - 0.00000000000000000000000000005728 134.0
YYD2_k127_2000062_0 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 512.0
YYD2_k127_2000062_1 Peptidase family M50 K06402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008236 284.0
YYD2_k127_2000062_2 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000001285 224.0
YYD2_k127_2000062_3 Acyl-transferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000008665 163.0
YYD2_k127_2000062_4 hydrolase of the alpha beta-hydrolase fold K07019 - - 0.0000000000000000000000000000000000000004566 171.0
YYD2_k127_2011312_0 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004726 577.0
YYD2_k127_2011312_1 PFAM Aminotransferase class I and II K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 516.0
YYD2_k127_2011312_2 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 434.0
YYD2_k127_2011312_3 Pyruvate ferredoxin/flavodoxin oxidoreductase K00187 - 1.2.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005811 310.0
YYD2_k127_2011312_4 ADP-glyceromanno-heptose 6-epimerase activity K00091 - 1.1.1.219 0.0000000000000000000001264 113.0
YYD2_k127_2033687_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 2.392e-220 716.0
YYD2_k127_2033687_1 Response receiver-modulated cyclic diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 338.0
YYD2_k127_2033687_2 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.0000000000000000000000000000000002294 142.0
YYD2_k127_2033687_3 PFAM aminotransferase, class I and II K00814 - 2.6.1.2 0.00001161 55.0
YYD2_k127_2033687_4 Bacterial membrane protein YfhO - - - 0.00005363 55.0
YYD2_k127_2037986_0 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007509 280.0
YYD2_k127_2037986_1 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000004421 75.0
YYD2_k127_2037986_2 HEAT repeats - - - 0.0000003638 64.0
YYD2_k127_2042416_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 2.347e-272 877.0
YYD2_k127_2042416_1 FeoA - - - 3.767e-272 863.0
YYD2_k127_2042416_10 Pyruvate ferredoxin/flavodoxin oxidoreductase K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000001255 214.0
YYD2_k127_2042416_11 Hfq protein - - - 0.00000000000000000000000000000006251 130.0
YYD2_k127_2042416_12 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000001528 130.0
YYD2_k127_2042416_13 Receptor family ligand binding region - - - 0.0000000000000000000000000000553 133.0
YYD2_k127_2042416_14 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000002977 112.0
YYD2_k127_2042416_15 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins K07533 - 5.2.1.8 0.000000000000000000002084 109.0
YYD2_k127_2042416_16 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.00000000000000004863 88.0
YYD2_k127_2042416_17 Polymer-forming cytoskeletal - - - 0.0000006942 58.0
YYD2_k127_2042416_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 3.951e-237 741.0
YYD2_k127_2042416_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 4.533e-230 722.0
YYD2_k127_2042416_4 PFAM Cobyrinic acid ac-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 301.0
YYD2_k127_2042416_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005343 267.0
YYD2_k127_2042416_6 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000009511 265.0
YYD2_k127_2042416_7 iron dependent repressor K03709 - - 0.000000000000000000000000000000000000000000000000000000000000000000003325 247.0
YYD2_k127_2042416_8 ParB-like nuclease domain K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000005579 245.0
YYD2_k127_2042416_9 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000001047 215.0
YYD2_k127_2045081_0 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 1.868e-222 703.0
YYD2_k127_2045081_1 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007992 513.0
YYD2_k127_2045081_10 FAD binding domain - - - 0.00000000000000000000000000000000000001395 166.0
YYD2_k127_2045081_11 Haem-binding domain - - - 0.00000000000000000000000000000000000001913 150.0
YYD2_k127_2045081_12 - - - - 0.0000000000000000000000000000000000002285 151.0
YYD2_k127_2045081_13 cheY-homologous receiver domain - - - 0.00000000000000000000000000000007142 128.0
YYD2_k127_2045081_14 Methyltransferase domain - - - 0.0000000000000000000000000000006492 141.0
YYD2_k127_2045081_15 methyltransferase - - - 0.0000000000000051 78.0
YYD2_k127_2045081_2 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 480.0
YYD2_k127_2045081_3 6-phosphofructokinase activity K00850,K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006839 419.0
YYD2_k127_2045081_4 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 397.0
YYD2_k127_2045081_5 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 401.0
YYD2_k127_2045081_6 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0000271,GO:0003674,GO:0003824,GO:0004373,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000852 252.0
YYD2_k127_2045081_7 PFAM methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000006339 225.0
YYD2_k127_2045081_8 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000005444 237.0
YYD2_k127_2045081_9 Adenosine/AMP deaminase - - - 0.000000000000000000000000000000000000000000000000003535 196.0
YYD2_k127_2045664_0 aconitate hydratase K01681 - 4.2.1.3 5.728e-246 774.0
YYD2_k127_2045664_1 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 415.0
YYD2_k127_2045664_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000002775 176.0
YYD2_k127_2047727_0 DMT(Drug metabolite transporter) superfamily permease - - - 0.00000000001671 77.0
YYD2_k127_2047727_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000004754 58.0
YYD2_k127_2052636_0 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.000000000000000000000000000000000000000000000000000000000000000000004596 259.0
YYD2_k127_2052636_1 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000433 175.0
YYD2_k127_2052636_2 MotA/TolQ/ExbB proton channel family K03561,K03562 - - 0.000000000000000000000000000000000000000002855 164.0
YYD2_k127_2052636_3 PFAM OmpA MotB domain protein K03640 - - 0.00000000000000000000000000000001245 137.0
YYD2_k127_2052636_4 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.00000000000000000000000006103 115.0
YYD2_k127_2052636_5 COG0810 Periplasmic protein TonB, links inner and outer membranes K03832 - - 0.00001965 55.0
YYD2_k127_2053104_0 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005559 454.0
YYD2_k127_2053104_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 360.0
YYD2_k127_2053104_10 Prokaryotic N-terminal methylation motif - - - 0.000007901 55.0
YYD2_k127_2053104_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003885 277.0
YYD2_k127_2053104_3 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000001233 226.0
YYD2_k127_2053104_4 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000004195 210.0
YYD2_k127_2053104_5 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000001238 207.0
YYD2_k127_2053104_6 - - - - 0.000000000000000000000000000000000000000000001805 185.0
YYD2_k127_2053104_7 Histidine kinase K02668,K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000108 184.0
YYD2_k127_2053104_8 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000005932 175.0
YYD2_k127_2053104_9 Glycosyl hydrolases family 6 K19668 - 3.2.1.91 0.000000006231 70.0
YYD2_k127_2056316_0 selenocysteine lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002666 244.0
YYD2_k127_2056316_1 Diacylglycerol kinase catalytic domain K07029 GO:0003674,GO:0003824,GO:0004143,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.107 0.0000000000000000000000000000000000000000005172 171.0
YYD2_k127_2056316_2 Phosphotransferase enzyme family - - - 0.000000000000000001004 98.0
YYD2_k127_2062231_0 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 477.0
YYD2_k127_2062231_1 TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000003676 235.0
YYD2_k127_2062231_2 Belongs to the peptidase S11 family K07258,K07262 - 3.4.16.4 0.000000000000000000000000000000000000000000000000004265 192.0
YYD2_k127_2062231_3 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000002778 106.0
YYD2_k127_2062231_4 Protein of unknown function (DUF3617) - - - 0.00000000000000000001187 103.0
YYD2_k127_2062231_5 Ferredoxin - - - 0.000000000000000003555 92.0
YYD2_k127_2062231_6 PilZ domain - - - 0.00002329 52.0
YYD2_k127_2062986_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 5.535e-273 854.0
YYD2_k127_2062986_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000001406 191.0
YYD2_k127_2080186_0 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 398.0
YYD2_k127_2080186_1 heat shock protein binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 317.0
YYD2_k127_2080186_2 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006163 327.0
YYD2_k127_2080186_3 DNA alkylation repair - - - 0.000000000000000000000000000000000000000000000000000000000183 209.0
YYD2_k127_2080186_4 ferredoxin-NADP+ reductase activity - - - 0.000000000000000000000000000000001629 142.0
YYD2_k127_2096164_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 2.542e-250 800.0
YYD2_k127_2096164_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 358.0
YYD2_k127_2096164_2 - - - - 0.00000000000000000000000000000000000000000000000000000000002208 216.0
YYD2_k127_2096164_3 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000000000000000000000001325 114.0
YYD2_k127_2096164_4 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.00000000000000000002916 96.0
YYD2_k127_2096164_5 - - - - 0.000000000001155 78.0
YYD2_k127_2109707_0 L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp K01876 - 6.1.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 483.0
YYD2_k127_2109707_1 Metal-dependent phosphohydrolase K07037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004695 379.0
YYD2_k127_2109707_2 PFAM PhoH family protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007735 347.0
YYD2_k127_2109707_3 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000065 232.0
YYD2_k127_2109707_4 PFAM CBS domain containing protein K06189 - - 0.0000000000000000000000000000000000000000000000000000000000824 226.0
YYD2_k127_2109707_5 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000001598 108.0
YYD2_k127_2129100_0 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009203 535.0
YYD2_k127_2129100_1 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 434.0
YYD2_k127_2129100_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008385 357.0
YYD2_k127_2129100_3 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000004643 124.0
YYD2_k127_2129100_4 glyoxalase III activity - - - 0.0000000000000000000000004304 116.0
YYD2_k127_2129100_5 WLM-domain-containing protein - GO:0000731,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006508,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0018130,GO:0019438,GO:0019538,GO:0019985,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0070011,GO:0071704,GO:0071897,GO:0090304,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901576 - 0.0001006 55.0
YYD2_k127_2152735_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004118 541.0
YYD2_k127_2152735_1 Belongs to the arylamine N-acetyltransferase family K00675 - 2.3.1.118 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 310.0
YYD2_k127_2152735_10 - - - - 0.000000000000196 79.0
YYD2_k127_2152735_11 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000003315 56.0
YYD2_k127_2152735_12 COG0457 FOG TPR repeat - - - 0.0001364 54.0
YYD2_k127_2152735_13 Putative adhesin - - - 0.0005698 52.0
YYD2_k127_2152735_2 Predicted nucleotidyltransferase K07074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001833 277.0
YYD2_k127_2152735_3 Activator of Hsp90 ATPase 1 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009427 241.0
YYD2_k127_2152735_4 COG2755 Lysophospholipase L1 and related esterases - - - 0.000000000000000000000000000000000000000000000000000003776 198.0
YYD2_k127_2152735_5 - - - - 0.0000000000000000000000000000000000000000000000000003245 190.0
YYD2_k127_2152735_6 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000005746 184.0
YYD2_k127_2152735_7 COG1670 Acetyltransferases, including N-acetylases of - - - 0.000000000000000000000000000000000009808 150.0
YYD2_k127_2152735_8 transcriptional regulator - - - 0.00000000000000000000003194 111.0
YYD2_k127_2152735_9 Histone acetyltransferase - - - 0.00000000000006616 85.0
YYD2_k127_2162367_0 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 346.0
YYD2_k127_2162367_1 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005304 261.0
YYD2_k127_2162367_2 Esterase of the alpha-beta hydrolase superfamily - - - 0.000000000000000000006528 102.0
YYD2_k127_2169709_0 DEAD DEAH box helicase K06877 - - 1.877e-290 921.0
YYD2_k127_2169709_1 Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma- L-glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine - GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005509,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016667,GO:0016670,GO:0018158,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:0120147,GO:1901564,GO:1903135 - 0.000000000000000000000000000000000003759 161.0
YYD2_k127_2169709_2 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000004895 133.0
YYD2_k127_2169709_3 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.000000000000000000000001006 117.0
YYD2_k127_2169709_4 Belongs to the bacterial histone-like protein family K03530 - - 0.000000000000000006066 86.0
YYD2_k127_2191129_0 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 327.0
YYD2_k127_2191129_1 Tellurite resistance protein TerB - - - 0.000000000000000000000000000000000000000000000002192 179.0
YYD2_k127_2191129_2 Alginate export - - - 0.00000000000000000000000000000000001345 150.0
YYD2_k127_2191129_3 iron dependent repressor K03709 - - 0.0000000000000000000002236 102.0
YYD2_k127_2192200_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 425.0
YYD2_k127_2192200_1 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 409.0
YYD2_k127_2192200_2 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 357.0
YYD2_k127_2192200_3 PFAM ABC transporter related K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006906 324.0
YYD2_k127_2192200_4 chaperone-mediated protein folding - - - 0.000001536 58.0
YYD2_k127_2201892_0 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 482.0
YYD2_k127_2201892_1 (ABC) transporter K15738 - - 0.000000000000000000000000000000000000000000000000002391 203.0
YYD2_k127_2204626_0 PFAM Cytochrome c oxidase, subunit I K04561 - 1.7.2.5 0.0 1009.0
YYD2_k127_2204626_1 Multicopper oxidase K04753 - - 0.00000000000000000000000000001167 135.0
YYD2_k127_2204626_2 von Willebrand factor (vWF) type A domain - - - 0.000000000000007825 88.0
YYD2_k127_2230575_0 mannose metabolic process K01191 - 3.2.1.24 1.332e-231 739.0
YYD2_k127_2231367_0 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 406.0
YYD2_k127_2231367_1 Esterase of the alpha-beta hydrolase superfamily - - - 0.0000000000000000000000000000000707 131.0
YYD2_k127_2237511_0 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004649 458.0
YYD2_k127_2237511_1 Cytochrome c K15864 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.2.1,1.7.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000001083 265.0
YYD2_k127_2244564_0 oligopeptide transporter, OPT family - - - 2.007e-319 990.0
YYD2_k127_2244564_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000323 409.0
YYD2_k127_2244564_10 arginine binding K03402 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000005191 95.0
YYD2_k127_2244564_11 ATPase-coupled phosphate ion transmembrane transporter activity - - - 0.000009837 56.0
YYD2_k127_2244564_12 cellulase activity - - - 0.0002248 52.0
YYD2_k127_2244564_2 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003625 340.0
YYD2_k127_2244564_3 Belongs to the ATCase OTCase family K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0043857,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 327.0
YYD2_k127_2244564_4 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K00857,K01920,K01935 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.21,6.3.2.3,6.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 319.0
YYD2_k127_2244564_5 Glutamate--cysteine ligase K01919 - 6.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000001567 272.0
YYD2_k127_2244564_6 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000002629 271.0
YYD2_k127_2244564_7 Peptidase dimerisation domain K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000823 243.0
YYD2_k127_2244564_8 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000001071 228.0
YYD2_k127_2244564_9 SMART Metal-dependent phosphohydrolase, HD region K07141 - 2.7.7.76 0.000000000000000000000000000000007021 147.0
YYD2_k127_2271457_0 AlkA N-terminal domain K13529,K13530 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005979 405.0
YYD2_k127_2271457_1 Fatty acid desaturase K00508 - 1.14.19.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008956 353.0
YYD2_k127_2271457_2 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.000000000000000000000000000000000000000001271 176.0
YYD2_k127_2271457_3 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000003174 118.0
YYD2_k127_2275593_0 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 581.0
YYD2_k127_2275593_1 formate C-acetyltransferase glycine radical K00656 - 2.3.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006438 584.0
YYD2_k127_2285131_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 492.0
YYD2_k127_2285131_1 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005062 399.0
YYD2_k127_2285131_2 N-Acetylmuramoyl-L-alanine amidase K01448,K02172 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000001958 280.0
YYD2_k127_2285131_3 regulatory protein, FmdB family - - - 0.000000000000000000007719 95.0
YYD2_k127_2285131_4 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000001486 68.0
YYD2_k127_2286627_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 370.0
YYD2_k127_2286627_1 aminopeptidase activity K19689 - - 0.000000000000000000000000000000000000000000000006339 189.0
YYD2_k127_2286627_2 spore germination K07790 - - 0.0000000000000000000000000000000000000000000008621 180.0
YYD2_k127_2286627_3 Uncharacterised protein family (UPF0158) - - - 0.000000000000002125 83.0
YYD2_k127_2286627_4 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000004805 64.0
YYD2_k127_2286627_5 Deoxyribodipyrimidine photo-lyase K01669 - 4.1.99.3 0.000000002895 71.0
YYD2_k127_2288077_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 2.884e-210 666.0
YYD2_k127_2288077_1 iron-nicotianamine transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008542 563.0
YYD2_k127_2288077_10 Glycosyl transferase family 2 - - - 0.000006399 58.0
YYD2_k127_2288077_2 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 299.0
YYD2_k127_2288077_3 NAD(P)H quinone oxidoreductase, PIG3 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 307.0
YYD2_k127_2288077_4 PFAM MMPL family K07003 - - 0.00000000000000000000000000000000000000000000000000000000000002521 220.0
YYD2_k127_2288077_5 PFAM RES domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000004858 222.0
YYD2_k127_2288077_6 YceI-like domain - - - 0.0000000000000000000000000000000000000000000000000000000003673 228.0
YYD2_k127_2288077_7 TIGRFAM cytochrome c nitrate reductase, small subunit K15876 - - 0.000000000000000000000000000000000000000000000000000003206 195.0
YYD2_k127_2288077_8 Methyltransferase domain - - - 0.000000000000006909 87.0
YYD2_k127_2288077_9 response regulator - - - 0.00000003929 59.0
YYD2_k127_2299927_0 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007757 383.0
YYD2_k127_2299927_1 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 385.0
YYD2_k127_2299927_10 Amidohydrolase family K20810 - 3.5.4.40 0.00000000000000000000000000000000000000000000000000000000000000003346 239.0
YYD2_k127_2299927_11 TIGRFAM Methylglyoxal synthase K01734 - 4.2.3.3 0.000000000000000000000000000000000000000000000000000000000000001897 228.0
YYD2_k127_2299927_12 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000000003244 227.0
YYD2_k127_2299927_13 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000265 201.0
YYD2_k127_2299927_14 CHAD domain containing protein - - - 0.000000000000000000000000000000000000000002464 180.0
YYD2_k127_2299927_15 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000002417 168.0
YYD2_k127_2299927_16 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00000000000000000000000000004195 134.0
YYD2_k127_2299927_17 Glutathione peroxidase - - - 0.00000000000000000004215 104.0
YYD2_k127_2299927_18 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000001329 87.0
YYD2_k127_2299927_2 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 361.0
YYD2_k127_2299927_20 Tetratricopeptide repeat - - - 0.000001361 62.0
YYD2_k127_2299927_21 HYR domain - - - 0.000001662 59.0
YYD2_k127_2299927_22 Involved in the tonB-independent uptake of proteins - - - 0.0004865 51.0
YYD2_k127_2299927_3 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006115 336.0
YYD2_k127_2299927_4 Glucose dehydrogenase C-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 315.0
YYD2_k127_2299927_5 4-hydroxybenzoate polyprenyltransferase K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002486 282.0
YYD2_k127_2299927_6 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002259 276.0
YYD2_k127_2299927_7 uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000002965 263.0
YYD2_k127_2299927_8 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000001829 276.0
YYD2_k127_2299927_9 PFAM response regulator receiver K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008214 250.0
YYD2_k127_2303615_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002756 528.0
YYD2_k127_2303615_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005318 318.0
YYD2_k127_2305401_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000001081 226.0
YYD2_k127_2305401_1 GHKL domain - - - 0.0000000000000000000000000000000000000000001476 168.0
YYD2_k127_2305401_2 beta-N-acetylglucosaminidase K01197 - 3.2.1.35 0.00000000000000000000007657 111.0
YYD2_k127_2309538_0 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009376 337.0
YYD2_k127_2309538_1 Domain of unknown function (DUF1731) K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003931 258.0
YYD2_k127_2309538_2 pyridoxal 5'-phosphate salvage K00020,K00275 - 1.1.1.31,1.4.3.5 0.000000000000000000000000000000000000000000000000000000616 199.0
YYD2_k127_2309538_3 Lipocalin-like domain - - - 0.00000000000000000004538 91.0
YYD2_k127_2313672_0 Site-specific recombinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005703 441.0
YYD2_k127_2313672_1 Tfp pilus assembly protein FimV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 392.0
YYD2_k127_2313672_2 Zinc-uptake complex component A periplasmic K09815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002646 280.0
YYD2_k127_2313672_3 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006176 273.0
YYD2_k127_2313672_4 ABC 3 transport family K02075 - - 0.00000000000000000000000000000000000000000000000000000000000000000004509 241.0
YYD2_k127_2313672_5 Belongs to the peptidase S11 family K01286,K07258 - 3.4.16.4 0.0000000000000000004306 91.0
YYD2_k127_2313672_7 Spore Coat - - - 0.00006755 56.0
YYD2_k127_2341732_0 Putative citrate transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 474.0
YYD2_k127_2341732_1 LytB protein K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 436.0
YYD2_k127_2341732_2 PFAM Transglycosylase SLT domain K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008303 365.0
YYD2_k127_2341732_3 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007083 338.0
YYD2_k127_2341732_4 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 316.0
YYD2_k127_2341732_5 FIST C domain - GO:0008150,GO:0040007 - 0.00000000000000000000000000000000000000000000000000009766 215.0
YYD2_k127_2341732_6 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000347 196.0
YYD2_k127_2341732_7 divalent heavy-metal cations transporter - - - 0.00000000000000000000000000000000000000000000002845 179.0
YYD2_k127_2341732_8 PFAM molybdopterin binding domain K03742 - 3.5.1.42 0.00000000000000000000000000000000000008889 160.0
YYD2_k127_2354986_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 3.682e-313 973.0
YYD2_k127_2354986_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000001239 282.0
YYD2_k127_2354986_2 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.000000000000000000000000000000000000000319 159.0
YYD2_k127_2354986_3 PilZ domain - - - 0.0000000000005641 76.0
YYD2_k127_2354986_4 carboxylic ester hydrolase activity - - - 0.0000000007712 71.0
YYD2_k127_2366303_0 Cysteine desulfurase K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 414.0
YYD2_k127_2366303_1 iron-sulfur cluster assembly K07033,K09015 GO:0006790,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0050896,GO:0051186,GO:0071840 - 0.000000000000000000000000000000000000000000000001021 178.0
YYD2_k127_2366303_2 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000005165 116.0
YYD2_k127_2369087_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000003781 194.0
YYD2_k127_2369087_1 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000315 151.0
YYD2_k127_2369087_2 - - - - 0.00005114 50.0
YYD2_k127_2413958_0 Carbamoyl-phosphate synthetase large chain domain protein K01955 - 6.3.5.5 0.0 1469.0
YYD2_k127_2413958_1 D,d-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000000000000000000000000001562 231.0
YYD2_k127_2413958_2 TIGRFAM rfaE bifunctional protein, domain I - - - 0.00000000000000000000000000000000000000000000000000000000000002678 235.0
YYD2_k127_2413958_3 Lipid A biosynthesis K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000001283 209.0
YYD2_k127_2413958_4 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000000000004178 185.0
YYD2_k127_2413958_5 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000008026 166.0
YYD2_k127_2413958_6 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000005747 79.0
YYD2_k127_2414471_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.846e-269 840.0
YYD2_k127_2414471_1 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000000000000000000000000000000000000000000002898 182.0
YYD2_k127_2414471_2 Peptidase family M1 domain - - - 0.000000000000000000000000000000000006733 158.0
YYD2_k127_2421152_0 Angiotensin-converting enzyme K01283 - 3.4.15.1 0.00000000000000000000000000000000000000000000000000000000000000000357 229.0
YYD2_k127_2421152_1 Peptidase M56 - - - 0.00000000000000000000000000000005751 142.0
YYD2_k127_2421152_2 Polymer-forming cytoskeletal - - - 0.0000000000000000000000007485 116.0
YYD2_k127_2421152_3 PBS lyase HEAT-like repeat - - - 0.000000001595 69.0
YYD2_k127_2421152_4 Probable molybdopterin binding domain K07141 - 2.7.7.76 0.00001466 55.0
YYD2_k127_2444076_0 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.00000000000000005109 89.0
YYD2_k127_2448971_0 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 579.0
YYD2_k127_2448971_1 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007817 493.0
YYD2_k127_2448971_10 Cupin - - - 0.00001912 52.0
YYD2_k127_2448971_11 - - - - 0.00007875 48.0
YYD2_k127_2448971_2 Phosphoenolpyruvate phosphomutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 333.0
YYD2_k127_2448971_3 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 311.0
YYD2_k127_2448971_4 Protein of unknown function (DUF1203) - - - 0.0000000000000000000000000000000000000000000000003722 180.0
YYD2_k127_2448971_5 - - - - 0.000000000000000000000000000000002732 138.0
YYD2_k127_2448971_6 heme oxygenase (decyclizing) activity - - - 0.0000000000000000000000001635 111.0
YYD2_k127_2448971_7 - - - - 0.0000000000000008594 88.0
YYD2_k127_2448971_8 NAD(P)H-binding - - - 0.00000000000001066 76.0
YYD2_k127_2450904_0 GHMP kinases N terminal domain K07031 - 2.7.1.168 0.0000000000000000000000000000000000000000000000000000000001787 216.0
YYD2_k127_2450904_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.00000000000000000000000000000000000000000000000004613 184.0
YYD2_k127_2450904_2 Belongs to the UPF0200 family - - - 0.0000000000000000001518 101.0
YYD2_k127_2450904_3 Polymer-forming cytoskeletal - - - 0.0000008413 57.0
YYD2_k127_2454358_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 518.0
YYD2_k127_2454358_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002866 417.0
YYD2_k127_2454358_2 dGTPase preferentially hydrolyzes dGTP over the other canonical NTPs K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0015949,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 364.0
YYD2_k127_2454358_3 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000005896 287.0
YYD2_k127_2454358_4 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.00000000000000000000000000000000000000000001301 169.0
YYD2_k127_2454358_5 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000002377 127.0
YYD2_k127_2454358_6 Protein of unknown function (DUF3467) - - - 0.00000000000000000008882 92.0
YYD2_k127_2454358_7 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000002765 75.0
YYD2_k127_2454358_8 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000009462 59.0
YYD2_k127_2462374_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1102.0
YYD2_k127_2462374_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.886e-213 692.0
YYD2_k127_2462374_10 Peptidase S24-like - - - 0.0000002343 60.0
YYD2_k127_2462374_11 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000008572 61.0
YYD2_k127_2462374_2 Dehydrogenase K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 426.0
YYD2_k127_2462374_3 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000399 403.0
YYD2_k127_2462374_4 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 368.0
YYD2_k127_2462374_5 SPFH domain-Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 348.0
YYD2_k127_2462374_6 serine acetyltransferase K00640 GO:0000096,GO:0000097,GO:0000098,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009001,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009070,GO:0009087,GO:0009987,GO:0016053,GO:0016054,GO:0016407,GO:0016412,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000002339 236.0
YYD2_k127_2462374_7 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000004027 224.0
YYD2_k127_2462374_8 Hydrolase, P-loop family K06925 - - 0.000000000000000000000001397 120.0
YYD2_k127_2462374_9 - - - - 0.0000000000000000000598 98.0
YYD2_k127_2473049_0 cellulose binding - - - 1.995e-293 931.0
YYD2_k127_2473049_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005266 600.0
YYD2_k127_2473049_10 Domain of unknown function (DUF4129) - - - 0.00000000000000000000000000000000000000000000000000000000000735 229.0
YYD2_k127_2473049_11 membrane protein domain - - - 0.0000000000000000000000000000000000000000000000000000000002918 213.0
YYD2_k127_2473049_12 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.000000000000000000000000000000000002473 141.0
YYD2_k127_2473049_13 Protein involved in meta-pathway of phenol degradation - - - 0.000000000000000000000003755 104.0
YYD2_k127_2473049_14 Domain of unknown function (DUF4350) - - - 0.000000000000000000003981 109.0
YYD2_k127_2473049_15 Domain of Unknown Function (DUF350) - - - 0.000000000002724 74.0
YYD2_k127_2473049_2 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 509.0
YYD2_k127_2473049_3 Domain of unknown function (DUF4178) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007211 479.0
YYD2_k127_2473049_4 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007758 398.0
YYD2_k127_2473049_5 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 366.0
YYD2_k127_2473049_6 transport, permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 338.0
YYD2_k127_2473049_7 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007516 325.0
YYD2_k127_2473049_8 transport, permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 321.0
YYD2_k127_2473049_9 Membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000257 286.0
YYD2_k127_2489262_0 gluconolactonase activity K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 458.0
YYD2_k127_2489262_1 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 389.0
YYD2_k127_2489262_10 STAS domain - - - 0.0000000000401 68.0
YYD2_k127_2489262_11 anti-sigma regulatory factor, serine threonine protein kinase K04757 - 2.7.11.1 0.000000001609 68.0
YYD2_k127_2489262_13 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0001013 51.0
YYD2_k127_2489262_2 Cupin 2, conserved barrel domain protein K11477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001065 279.0
YYD2_k127_2489262_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000004867 226.0
YYD2_k127_2489262_4 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000001187 200.0
YYD2_k127_2489262_5 Acyl-transferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000004023 195.0
YYD2_k127_2489262_6 gluconolactonase activity K01053 - 3.1.1.17 0.00000000000000000000000000000000000015 158.0
YYD2_k127_2489262_7 - - - - 0.000000000000000000000000000007972 134.0
YYD2_k127_2489262_8 DinB family - - - 0.0000000000000000000000003451 119.0
YYD2_k127_2489262_9 Glycogen debranching enzyme - - - 0.0000000000002151 78.0
YYD2_k127_2492377_0 RNA polymerase recycling family C-terminal K03580 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 306.0
YYD2_k127_2496127_0 FecR protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 507.0
YYD2_k127_2496127_1 negative regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment - - - 0.00000000000000000000000000000000000001814 163.0
YYD2_k127_2503191_0 G-rich domain on putative tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007165 365.0
YYD2_k127_2503191_1 Polysaccharide export protein K01991,K20988 - - 0.000000000000000000000000000000000000000000000000000000000000000001257 239.0
YYD2_k127_2503191_2 signal transduction histidine kinase K13587 - 2.7.13.3 0.0000000000000000006671 91.0
YYD2_k127_2503191_4 O-Antigen ligase - - - 0.00000000002558 75.0
YYD2_k127_2523971_0 DNA polymerase K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0 1148.0
YYD2_k127_2523971_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 2.082e-195 620.0
YYD2_k127_2523971_2 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 602.0
YYD2_k127_2523971_3 S-adenosylmethionine synthetase, C-terminal domain K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003729 536.0
YYD2_k127_2523971_4 Permease, YjgP YjgQ - - - 0.000000000000000000000000000000000000000000000000000000000000000002956 253.0
YYD2_k127_2523971_5 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000372 253.0
YYD2_k127_2523971_6 Cytochrome C biogenesis K02200 - - 0.0002661 55.0
YYD2_k127_2525973_0 conserved protein UCP033924 - - - 0.00000000000000000000000000000000000000006407 156.0
YYD2_k127_2525973_2 - - - - 0.0000000000000000000000000003215 118.0
YYD2_k127_2525973_4 oligosaccharyl transferase activity - - - 0.000000000000000000000000002443 129.0
YYD2_k127_2525973_5 Bacterial protein of unknown function (DUF883) - - - 0.0000000000000000006668 95.0
YYD2_k127_2525973_6 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00000002713 64.0
YYD2_k127_2535959_0 OPT oligopeptide transporter protein - - - 8.779e-270 842.0
YYD2_k127_2535959_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 540.0
YYD2_k127_2535959_10 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000046 251.0
YYD2_k127_2535959_11 Isoprenylcysteine carboxyl methyltransferase - - - 0.0000000000000000000000000000000000000000000009787 172.0
YYD2_k127_2535959_12 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000218 177.0
YYD2_k127_2535959_13 Protein of unknown function (DUF3224) - - - 0.0000000000000000000000000000000000000000007297 165.0
YYD2_k127_2535959_15 PFAM glutathione-dependent formaldehyde-activating GFA - - - 0.0000000000000000000000000000000004468 137.0
YYD2_k127_2535959_16 Cupin domain - - - 0.00000000000000000000000000001909 124.0
YYD2_k127_2535959_18 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000003551 90.0
YYD2_k127_2535959_19 Uncharacterized protein conserved in bacteria (DUF2255) - - - 0.0000000002044 71.0
YYD2_k127_2535959_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 519.0
YYD2_k127_2535959_20 Putative zinc- or iron-chelating domain K18475 - - 0.00000001771 64.0
YYD2_k127_2535959_3 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005024 484.0
YYD2_k127_2535959_4 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 442.0
YYD2_k127_2535959_5 Fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 362.0
YYD2_k127_2535959_6 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007354 297.0
YYD2_k127_2535959_7 sequence-specific DNA binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004882 258.0
YYD2_k127_2535959_8 Oxidoreductase NAD-binding domain K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000006251 279.0
YYD2_k127_2535959_9 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000554 251.0
YYD2_k127_2547113_0 Putative metal-binding domain of cation transport ATPase K01533 - 3.6.3.4 3.015e-220 711.0
YYD2_k127_2547113_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008936 552.0
YYD2_k127_2547113_10 capsular polysaccharide biosynthesis protein K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000001123 190.0
YYD2_k127_2547113_11 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000004994 184.0
YYD2_k127_2547113_12 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000003198 160.0
YYD2_k127_2547113_13 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.0000000000000000000000000000000000000002612 167.0
YYD2_k127_2547113_14 KH domain K06960 - - 0.00000000000000000000000000361 112.0
YYD2_k127_2547113_15 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000007586 103.0
YYD2_k127_2547113_16 Ribosomal protein S16 K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000035 90.0
YYD2_k127_2547113_17 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000001148 83.0
YYD2_k127_2547113_18 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 GO:0008150,GO:0040007 - 0.0000000000000005843 85.0
YYD2_k127_2547113_19 FixH - - - 0.000000000000002222 90.0
YYD2_k127_2547113_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006682 491.0
YYD2_k127_2547113_20 type IV pilus biogenesis stability protein PilW K02656 - - 0.0000000000002834 83.0
YYD2_k127_2547113_21 Cytochrome oxidase maturation protein cbb3-type - - - 0.00000000916 63.0
YYD2_k127_2547113_3 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 470.0
YYD2_k127_2547113_4 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 328.0
YYD2_k127_2547113_5 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001692 295.0
YYD2_k127_2547113_6 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000526 291.0
YYD2_k127_2547113_7 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000003722 256.0
YYD2_k127_2547113_8 riboflavin synthase, alpha K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000001615 195.0
YYD2_k127_2547113_9 Cytochrome c K00406 - - 0.000000000000000000000000000000000000000000000005745 181.0
YYD2_k127_2559909_0 Oligopeptidase F K08602 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 528.0
YYD2_k127_2559909_1 CarD-like/TRCF domain K07736 - - 0.00000000000000000000000000000000000000001053 158.0
YYD2_k127_2559909_2 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.00000000000000000000000000002189 136.0
YYD2_k127_2559909_3 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4 0.00000000005066 76.0
YYD2_k127_2559909_4 Protein of unknown function (DUF2752) - - - 0.000006928 55.0
YYD2_k127_2563942_0 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 301.0
YYD2_k127_2563942_1 Zn_pept - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001127 263.0
YYD2_k127_2563942_10 Proprotein convertase P-domain - - - 0.00000000000000001873 95.0
YYD2_k127_2563942_11 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000002057 79.0
YYD2_k127_2563942_12 Zn_pept - - - 0.000000003905 68.0
YYD2_k127_2563942_2 Domain of unknown function (DUF4188) - - - 0.00000000000000000000000000000000000000000000000002654 189.0
YYD2_k127_2563942_3 - - - - 0.0000000000000000000000000000000000000000000006729 179.0
YYD2_k127_2563942_4 oxidation-reduction process - - - 0.00000000000000000000000000000000000000000002803 166.0
YYD2_k127_2563942_5 Oxidoreductase FAD-binding domain - - - 0.00000000000000000000000000000000000000000035 177.0
YYD2_k127_2563942_6 Cupin domain - - - 0.000000000000000000000000000000000000001841 157.0
YYD2_k127_2563942_7 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.000000000000000000000000000000001355 139.0
YYD2_k127_2563942_8 Ndr family - - - 0.00000000000000000000000000003064 134.0
YYD2_k127_2563942_9 Amidinotransferase K01482 - 3.5.3.18 0.0000000000000000000000000001572 118.0
YYD2_k127_257412_0 Competence-damaged protein K03742 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005275 299.0
YYD2_k127_257412_1 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000005285 149.0
YYD2_k127_257412_2 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000009329 114.0
YYD2_k127_2597865_0 cellulose binding - - - 0.0 1288.0
YYD2_k127_2597865_1 Dienelactone hydrolase family - - - 1.409e-208 660.0
YYD2_k127_2597865_2 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 315.0
YYD2_k127_2597865_3 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000556 244.0
YYD2_k127_2617434_0 Sulfate transporter antisigma-factor antagonist STAS - - - 6.445e-271 846.0
YYD2_k127_2617434_1 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007396 415.0
YYD2_k127_2617434_2 Asparaginase - - - 0.000000000000000000000000000000000000000000000000000000000000000006958 229.0
YYD2_k127_2617434_3 YidE YbjL duplication K07085 - - 0.0000000002999 63.0
YYD2_k127_2639303_0 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000002895 222.0
YYD2_k127_2639303_1 Methyltransferase domain - - - 0.0000001832 57.0
YYD2_k127_2639303_2 Trypsin K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000028 60.0
YYD2_k127_2640419_0 Peptidase, family M49 - - - 4.504e-205 653.0
YYD2_k127_2640419_1 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 481.0
YYD2_k127_2640419_2 L-threonylcarbamoyladenylate synthase K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006511 328.0
YYD2_k127_2640419_3 PFAM von Willebrand factor type A K01337 - 3.4.21.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002125 307.0
YYD2_k127_2640419_4 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.00000000000000000000002293 111.0
YYD2_k127_2640419_5 - - - - 0.000000000000000000001785 105.0
YYD2_k127_2640419_6 glutamine amidotransferase - - - 0.000000000002245 80.0
YYD2_k127_2691771_0 Angiotensin-converting enzyme K01283 - 3.4.15.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003123 378.0
YYD2_k127_2691771_1 Aminotransferase class I and II K00812,K10907 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 365.0
YYD2_k127_2691771_2 Transmembrane protein 260 - - - 0.00000000000031 82.0
YYD2_k127_2696596_0 Amp-dependent synthetase and ligase K00797,K01897 - 2.5.1.16,6.2.1.3 0.0 1154.0
YYD2_k127_2696596_1 PFAM Glycosyl transferases group 1 K13057 - 2.4.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004302 479.0
YYD2_k127_2696596_2 Nucleotidyl transferase K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000652 413.0
YYD2_k127_2696596_3 alpha,alpha-trehalose-phosphate synthase K00697 - 2.4.1.15,2.4.1.347 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 391.0
YYD2_k127_2696596_4 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000001577 160.0
YYD2_k127_2696596_5 glycosyl transferase family K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.00000000000000000000199 110.0
YYD2_k127_2696596_6 Peptidase family M54 K06974 - - 0.000000000000004679 83.0
YYD2_k127_2696596_7 - - - - 0.000008338 49.0
YYD2_k127_269991_0 - - - - 0.00000000000000000000000000000000002932 153.0
YYD2_k127_269991_1 - - - - 0.00000000000000000000162 104.0
YYD2_k127_269991_2 metallopeptidase activity - - - 0.0000000000000001124 81.0
YYD2_k127_269991_3 Domain of unknown function (DUF4115) K15539 - - 0.0000000000000008488 87.0
YYD2_k127_2700929_0 Protein of unknown function (DUF2723) - - - 0.00000000000000000000000000000002494 143.0
YYD2_k127_2700929_1 Male sterility protein - - - 0.00000000000000000000000000002218 136.0
YYD2_k127_2700929_2 polysaccharide biosynthetic process - - - 0.0000000000000000000000000001799 133.0
YYD2_k127_2700929_3 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000002908 122.0
YYD2_k127_2700929_4 PFAM Methyltransferase type 11 - - - 0.000000000001173 78.0
YYD2_k127_2700929_5 methyltransferase - - - 0.0000000008063 72.0
YYD2_k127_2702398_0 Phosphoglycerate kinase K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009455 443.0
YYD2_k127_2702398_1 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 428.0
YYD2_k127_2702398_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000017 246.0
YYD2_k127_2702398_3 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000000000000000518 156.0
YYD2_k127_2702398_4 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000001037 108.0
YYD2_k127_2702398_5 Preprotein translocase SecG subunit K03075 - - 0.0000000000000000001152 102.0
YYD2_k127_271575_0 COG0841 Cation multidrug efflux pump K18902,K19594 - - 0.0 1356.0
YYD2_k127_271575_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18298,K19586 - - 0.00000000000000000000000000000000000000000000000000000000000000005756 236.0
YYD2_k127_2733729_0 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006803 603.0
YYD2_k127_2733729_1 Deoxyribodipyrimidine photo-lyase-related protein K06876 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 488.0
YYD2_k127_2733729_10 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000006319 231.0
YYD2_k127_2733729_11 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000001716 191.0
YYD2_k127_2733729_12 - - - - 0.00000000000004407 84.0
YYD2_k127_2733729_2 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005629 468.0
YYD2_k127_2733729_3 amine oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 406.0
YYD2_k127_2733729_4 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 324.0
YYD2_k127_2733729_5 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004962 293.0
YYD2_k127_2733729_6 PFAM Peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001393 289.0
YYD2_k127_2733729_7 His Kinase A (phosphoacceptor) domain K20971 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005557 292.0
YYD2_k127_2733729_8 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000006254 250.0
YYD2_k127_2733729_9 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000007627 274.0
YYD2_k127_2738459_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 455.0
YYD2_k127_2738459_1 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 394.0
YYD2_k127_2738459_2 DNA-templated transcription, initiation K02405 - - 0.000000000000000000000000000000000000000000000002941 179.0
YYD2_k127_2738459_3 EamA-like transporter family - - - 0.00000000000000000000000000004485 136.0
YYD2_k127_2784328_0 xanthine dehydrogenase activity K04108 - 1.3.7.9 3.676e-274 874.0
YYD2_k127_2784328_1 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004137 327.0
YYD2_k127_2784328_2 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 312.0
YYD2_k127_2784328_3 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006537 278.0
YYD2_k127_2784328_4 [2Fe-2S] binding domain K03518,K13483 - 1.2.5.3 0.00000000000000000000000000000000000000000000000003128 186.0
YYD2_k127_2784328_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07025 - - 0.00000000000000000000000000006048 128.0
YYD2_k127_2784328_6 BON domain - - - 0.000000000000000000003302 98.0
YYD2_k127_2784328_7 diguanylate cyclase activity K02000,K04767,K05847,K07168,K09137 - 3.6.3.32 0.000000000000000000451 92.0
YYD2_k127_2784328_8 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000004128 88.0
YYD2_k127_2784328_9 Peptidase M1 membrane alanine aminopeptidase - - - 0.000001193 61.0
YYD2_k127_2786038_0 oligopeptide transport K03305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001567 287.0
YYD2_k127_2786038_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000001898 176.0
YYD2_k127_2786038_2 Adenylate cyclase - - - 0.000000000000000000000000000000000000005993 164.0
YYD2_k127_2786038_3 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000481 113.0
YYD2_k127_2795175_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 2.725e-296 930.0
YYD2_k127_2795175_1 Carboxyl transferase domain K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 4.152e-252 786.0
YYD2_k127_2795175_2 Biotin carboxylase K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007401 548.0
YYD2_k127_2795175_3 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016832,GO:0019637,GO:0044237,GO:0071704,GO:1901135 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002931 312.0
YYD2_k127_2795175_4 AlkA N-terminal domain K13529,K13530 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002907 284.0
YYD2_k127_2795175_5 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0000000000000000000000000000000000000000001157 168.0
YYD2_k127_2795175_6 Biotin-requiring enzyme - - - 0.000000000000000000004123 107.0
YYD2_k127_2808150_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 558.0
YYD2_k127_2808150_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010556,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:1990837,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007888 488.0
YYD2_k127_2808150_10 Ribosomal protein L34 K02914 - - 0.000000000005811 68.0
YYD2_k127_2808150_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 323.0
YYD2_k127_2808150_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000002362 273.0
YYD2_k127_2808150_4 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000004977 211.0
YYD2_k127_2808150_5 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000001717 227.0
YYD2_k127_2808150_6 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000001495 170.0
YYD2_k127_2808150_7 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000007843 114.0
YYD2_k127_2808150_8 Jag_N K06346 - - 0.0000000000000000005039 95.0
YYD2_k127_2808150_9 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000002371 82.0
YYD2_k127_2814428_0 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 559.0
YYD2_k127_2814428_1 Protein of unknown function (DUF1343) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004246 416.0
YYD2_k127_2814428_10 Molybdopterin K03636 - - 0.00000004376 65.0
YYD2_k127_2814428_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001104 280.0
YYD2_k127_2814428_3 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000601 203.0
YYD2_k127_2814428_4 DHHA1 domain protein K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000001682 206.0
YYD2_k127_2814428_5 Isoleucine patch superfamily - - - 0.0000000000000000000000000000000000000000000003163 172.0
YYD2_k127_2814428_6 molybdopterin synthase activity K03635,K21142 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016782,GO:0016783,GO:0018130,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0030366,GO:0032324,GO:0034641,GO:0042278,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.8.1.12 0.00000000000000000000000000000000000000002084 161.0
YYD2_k127_2814428_7 Exonuclease - - - 0.00000000000000000000000000000000001206 142.0
YYD2_k127_2814428_8 Tetratricopeptide repeat - - - 0.00000000000003479 76.0
YYD2_k127_2814428_9 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.00000000000007266 84.0
YYD2_k127_287416_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.92e-298 943.0
YYD2_k127_287416_1 PFAM Type II secretion system F domain K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001963 283.0
YYD2_k127_287416_2 PFAM Type II secretion system protein E K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004983 269.0
YYD2_k127_287416_3 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000006368 195.0
YYD2_k127_287416_4 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000006521 121.0
YYD2_k127_287416_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000003367 106.0
YYD2_k127_287416_6 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000002036 102.0
YYD2_k127_287416_7 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.00000008851 56.0
YYD2_k127_2887655_0 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 396.0
YYD2_k127_2887655_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 314.0
YYD2_k127_2887655_2 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006212 286.0
YYD2_k127_2887655_3 NAD binding K00333,K13378 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 0.0000000003595 61.0
YYD2_k127_288846_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1152.0
YYD2_k127_288846_1 Sodium:neurotransmitter symporter family - - - 1.817e-194 621.0
YYD2_k127_288846_10 Tetratricopeptide repeat - - - 0.0000000000000000000002499 113.0
YYD2_k127_288846_11 helix_turn_helix, Lux Regulon - - - 0.000000000000000000006657 99.0
YYD2_k127_288846_12 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.000000000000002652 83.0
YYD2_k127_288846_13 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.0000000000006127 77.0
YYD2_k127_288846_14 - - - - 0.000000008468 60.0
YYD2_k127_288846_15 Ankyrin repeat K21440 - - 0.00000001498 66.0
YYD2_k127_288846_16 response to nickel cation - - - 0.000001879 56.0
YYD2_k127_288846_2 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004971 473.0
YYD2_k127_288846_3 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000007136 227.0
YYD2_k127_288846_4 Flavin reductase like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002898 226.0
YYD2_k127_288846_5 MotA TolQ ExbB proton channel K03561,K03562 - - 0.00000000000000000000000000000000000000000000000000001675 196.0
YYD2_k127_288846_6 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000004379 197.0
YYD2_k127_288846_7 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000001435 187.0
YYD2_k127_288846_8 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000000000000000000000000000001379 152.0
YYD2_k127_288846_9 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.0000000000000000000001516 103.0
YYD2_k127_2897933_0 membrane protein required for spore maturation in B.subtilis K06374 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007483 422.0
YYD2_k127_2897933_1 Reverse transcriptase-like K02226,K22316 GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006401,GO:0006725,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016891,GO:0016893,GO:0017144,GO:0018130,GO:0019438,GO:0019439,GO:0032296,GO:0033013,GO:0033014,GO:0034641,GO:0034655,GO:0042364,GO:0042578,GO:0043170,GO:0043755,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046700,GO:0051186,GO:0051188,GO:0071667,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 3.1.26.4,3.1.3.73 0.0000000000000000000000000000003698 127.0
YYD2_k127_2897933_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000007609 113.0
YYD2_k127_2897933_3 C4-type zinc ribbon domain K07164 - - 0.00000000000001524 84.0
YYD2_k127_2906873_0 Putative zinc binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009724 423.0
YYD2_k127_2906873_1 CDP-glucose 4,6-dehydratase K01709 - 4.2.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008166 369.0
YYD2_k127_2906873_2 Glucose-1-phosphate cytidylyltransferase K00978 - 2.7.7.33 0.000000000000000000000000000000000000000000000000000000005154 222.0
YYD2_k127_2906873_3 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000001429 199.0
YYD2_k127_2906873_4 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.00000000000005316 81.0
YYD2_k127_292190_0 Acyl-CoA dehydrogenase, C-terminal domain K00248,K09478 - 1.3.8.1,1.3.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 496.0
YYD2_k127_292190_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 404.0
YYD2_k127_292190_2 SdrD B-like domain - - - 0.0000000000000000000000001768 124.0
YYD2_k127_292190_3 - - - - 0.0000000000000000001025 96.0
YYD2_k127_2957842_0 Gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008201 633.0
YYD2_k127_2957842_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 495.0
YYD2_k127_2957842_2 Dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004945 286.0
YYD2_k127_2957842_3 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001279 286.0
YYD2_k127_2957842_4 Domain present in PSD-95, Dlg, and ZO-1/2. K08372 - - 0.00000000009605 72.0
YYD2_k127_2958518_0 cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000001971 258.0
YYD2_k127_2958518_1 PFAM Silent information regulator protein Sir2 K12410 - - 0.00000000000000000000000000000000000000000000000000000000002942 217.0
YYD2_k127_2958518_2 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000000000001786 190.0
YYD2_k127_2958518_3 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.000000000000000000003546 101.0
YYD2_k127_2964302_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 2.554e-202 640.0
YYD2_k127_2964302_1 Belongs to the MurCDEF family K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 464.0
YYD2_k127_2964302_10 PFAM Abortive infection protein K07052 - - 0.00001217 55.0
YYD2_k127_2964302_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 439.0
YYD2_k127_2964302_3 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003983 386.0
YYD2_k127_2964302_4 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003601 288.0
YYD2_k127_2964302_5 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000092 254.0
YYD2_k127_2964302_6 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000239 229.0
YYD2_k127_2964302_7 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000001115 209.0
YYD2_k127_2964302_8 AsmA family K07289 - - 0.000005547 60.0
YYD2_k127_2964302_9 TIGRFAM TonB family protein K03832 - - 0.000005684 57.0
YYD2_k127_2964549_0 Cytochrome bd-type quinol oxidase subunit 1 K00425 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003985 596.0
YYD2_k127_2964549_1 PFAM NADH flavin oxidoreductase NADH oxidase K10680 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 445.0
YYD2_k127_2964549_2 COG1294 Cytochrome bd-type quinol oxidase subunit 2 K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 413.0
YYD2_k127_2964549_3 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002564 284.0
YYD2_k127_2964549_4 Belongs to the peptidase S51 family K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000002527 262.0
YYD2_k127_2967102_0 ATP-dependent DNA helicase activity K01144,K07464,K16898 - 3.1.11.5,3.1.12.1,3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000007409 251.0
YYD2_k127_2967102_1 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000005801 200.0
YYD2_k127_2967102_2 Methylpurine-DNA glycosylase (MPG) K03652 - 3.2.2.21 0.000000000000000000000000000000000000000000002823 172.0
YYD2_k127_2967102_3 Methyltransferase K07755 - 2.1.1.137 0.00000000000000000000000000000000000000004018 160.0
YYD2_k127_2980093_0 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 567.0
YYD2_k127_2980093_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 304.0
YYD2_k127_2980093_2 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000005323 138.0
YYD2_k127_2980093_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0000166,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0004140,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019103,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032551,GO:0032552,GO:0032553,GO:0032554,GO:0032557,GO:0032558,GO:0032564,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000009095 108.0
YYD2_k127_2980093_4 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000002632 52.0
YYD2_k127_2980480_0 aldehyde oxidase and xanthine dehydrogenase a b hammerhead K11177 - 1.17.1.4 8.142e-237 752.0
YYD2_k127_2980480_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 466.0
YYD2_k127_2980480_10 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 0.0003237 50.0
YYD2_k127_2980480_2 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 346.0
YYD2_k127_2980480_3 iron ion homeostasis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006296 295.0
YYD2_k127_2980480_4 PFAM molybdopterin dehydrogenase, FAD-binding K11178 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000001491 235.0
YYD2_k127_2980480_5 [2Fe-2S] binding domain K13483 - - 0.000000000000000000000000000000000000000000001237 172.0
YYD2_k127_2980480_6 B3/4 domain - - - 0.0000000000000000000000000000000004365 140.0
YYD2_k127_2980480_7 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000102 126.0
YYD2_k127_2980480_8 - - - - 0.0000000000000001063 88.0
YYD2_k127_2981158_0 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000002351 125.0
YYD2_k127_2981158_1 cellulase activity - - - 0.000000000000000000000005146 121.0
YYD2_k127_298486_0 Belongs to the peptidase M48B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 490.0
YYD2_k127_298486_1 Short chain dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006174 253.0
YYD2_k127_298486_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000002358 174.0
YYD2_k127_298486_3 PAP2 superfamily - - - 0.000000000000000000000000003711 119.0
YYD2_k127_298486_4 Gram-negative bacterial TonB protein C-terminal - - - 0.0000000000000000000000001842 109.0
YYD2_k127_2984933_0 PFAM peptidase M61 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006983 572.0
YYD2_k127_2984933_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003818 473.0
YYD2_k127_2984933_2 Belongs to the carbamate kinase family K00926 - 2.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007604 391.0
YYD2_k127_2984933_3 Protein of unknown function (DUF2785) - - - 0.00000000000000000000000004741 126.0
YYD2_k127_2984933_4 methyltransferase - - - 0.00000000000000000000001967 101.0
YYD2_k127_3018240_0 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 378.0
YYD2_k127_3018240_1 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535,K13599 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000759 271.0
YYD2_k127_3018240_10 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.00000000000000000000000000001216 124.0
YYD2_k127_3018240_11 Glycoprotease family K14742 - - 0.0000000000000000000119 108.0
YYD2_k127_3018240_12 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 1.2.1.11 0.0000000002578 72.0
YYD2_k127_3018240_13 phosphorelay signal transduction system - - - 0.0001612 55.0
YYD2_k127_3018240_2 Two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000003506 265.0
YYD2_k127_3018240_3 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000001731 207.0
YYD2_k127_3018240_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000001187 192.0
YYD2_k127_3018240_5 ggdef domain - - - 0.00000000000000000000000000000000000000000002435 178.0
YYD2_k127_3018240_6 ggdef domain - - - 0.000000000000000000000000000000000000000001039 180.0
YYD2_k127_3018240_7 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000003178 171.0
YYD2_k127_3018240_8 Tetratricopeptide repeat K12600 - - 0.000000000000000000000000000000000000000212 165.0
YYD2_k127_3018240_9 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000066 150.0
YYD2_k127_3022603_0 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 362.0
YYD2_k127_3022603_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K20444 - - 0.0000000000000000000000000000000000000000000000000002862 200.0
YYD2_k127_3022603_2 Putative neutral zinc metallopeptidase K07054 GO:0005575,GO:0005576 - 0.0000000000000000000000000000000000000000000000000302 183.0
YYD2_k127_3022603_3 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000000003222 134.0
YYD2_k127_3022603_4 Plasmid stability protein K21495 - - 0.000009665 58.0
YYD2_k127_302996_0 Peptidase family M28 - - - 7.544e-214 688.0
YYD2_k127_302996_1 TIGRFAM ornithine aminotransferase K00819 - 2.6.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 310.0
YYD2_k127_302996_2 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity K00819,K00821 GO:0003674,GO:0003824,GO:0004587,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016740,GO:0016769,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.6.1.11,2.6.1.13,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000229 267.0
YYD2_k127_3037084_0 hydroxymethylglutaryl-CoA reductase (NADPH) activity K00021 - 1.1.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 610.0
YYD2_k127_3037084_1 ABC1 family K03688 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016020,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901576,GO:1901661,GO:1901663 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 533.0
YYD2_k127_3037084_10 esterase of the alpha-beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000000000167 183.0
YYD2_k127_3037084_11 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000003475 192.0
YYD2_k127_3037084_12 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000001509 150.0
YYD2_k127_3037084_13 membrane K08978 - - 0.0000000000000001073 93.0
YYD2_k127_3037084_14 Hemerythrin HHE cation binding domain K07216 - - 0.0000000000001485 76.0
YYD2_k127_3037084_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 469.0
YYD2_k127_3037084_3 COG1012 NAD-dependent aldehyde dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006173 477.0
YYD2_k127_3037084_4 synthetase (ADP forming), alpha K01905,K09181,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 428.0
YYD2_k127_3037084_5 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 408.0
YYD2_k127_3037084_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 402.0
YYD2_k127_3037084_7 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 315.0
YYD2_k127_3037084_8 Enoyl-(Acyl carrier protein) reductase K15734 - 1.1.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003796 289.0
YYD2_k127_3037084_9 PFAM Alcohol dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000009519 275.0
YYD2_k127_3070747_0 Carboxyl transferase domain - - - 6.782e-278 860.0
YYD2_k127_3070747_1 6-phosphogluconolactonase activity - - - 1.76e-270 864.0
YYD2_k127_3070747_2 PFAM ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000059 439.0
YYD2_k127_3070747_3 Transcriptional regulatory protein, C terminal K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 311.0
YYD2_k127_3070747_4 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 289.0
YYD2_k127_3070747_5 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002145 272.0
YYD2_k127_3070747_6 - - - - 0.0000000000000000000000000000000000000000000000005399 202.0
YYD2_k127_3070747_7 PFAM biotin lipoyl attachment domain-containing protein - - - 0.00000000000000000000000000000000000000000006898 182.0
YYD2_k127_3070747_8 SCO1/SenC - - - 0.0000000000000003008 92.0
YYD2_k127_3075220_0 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000000000002025 197.0
YYD2_k127_3075220_1 Uncharacterized conserved protein (DUF2277) - - - 0.00000000000000000000000000000007367 130.0
YYD2_k127_3075220_2 FR47-like protein K18816 - 2.3.1.82 0.0000000000000000000000000000001647 130.0
YYD2_k127_3075220_3 repeat-containing protein - - - 0.000000000000000000004927 108.0
YYD2_k127_3085572_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.753e-253 806.0
YYD2_k127_3085572_1 Enoyl-CoA hydratase/isomerase K15513 - 4.1.2.44 6.205e-221 698.0
YYD2_k127_3085572_10 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003417 282.0
YYD2_k127_3085572_11 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000005018 267.0
YYD2_k127_3085572_12 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K15546 - - 0.000000000000000000000000000000000000000000000000000083 196.0
YYD2_k127_3085572_13 Memo-like protein - - - 0.000000000000000000000000000000000000000000003596 183.0
YYD2_k127_3085572_14 PFAM AMMECR1 domain protein K09141 - - 0.00000000000000000000000000000000000000001253 166.0
YYD2_k127_3085572_15 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000000000000000000000000000000000000005294 171.0
YYD2_k127_3085572_16 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000000000000000000000000007024 131.0
YYD2_k127_3085572_17 Transglutaminase-like superfamily - - - 0.0001869 56.0
YYD2_k127_3085572_2 benzoyl-CoA oxygenase K15512 - 1.14.13.208 7.879e-204 670.0
YYD2_k127_3085572_3 ATP-dependent helicase K03579 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 564.0
YYD2_k127_3085572_4 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 454.0
YYD2_k127_3085572_5 Alanine dehydrogenase/PNT, N-terminal domain K00290,K14157 - 1.5.1.7,1.5.1.8,1.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005544 430.0
YYD2_k127_3085572_6 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 376.0
YYD2_k127_3085572_7 Saccharopine dehydrogenase C-terminal domain K00293 - 1.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006936 372.0
YYD2_k127_3085572_8 Branched-chain amino acid transport system / permease component K01997,K11960 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007714 352.0
YYD2_k127_3085572_9 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 302.0
YYD2_k127_3087292_0 Amidohydrolase family K01443 - 3.5.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007512 471.0
YYD2_k127_3087292_1 imidazolonepropionase activity K01443 - 3.5.1.25 0.0000000000000000000000000000000000000000000000000000000000000105 237.0
YYD2_k127_3087292_2 stage II sporulation - - - 0.00000000000000000000000000000000001633 144.0
YYD2_k127_3087292_3 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000000000000000000007308 134.0
YYD2_k127_3087292_4 Metallo-peptidase family M12B Reprolysin-like - - - 0.0000000000000000002589 103.0
YYD2_k127_3088056_0 capsular polysaccharide biosynthesis protein - - - 0.0005292 53.0
YYD2_k127_3104450_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006634 483.0
YYD2_k127_3104450_1 Phospholipase K01058 GO:0003674,GO:0003824,GO:0004620,GO:0004623,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005623,GO:0008970,GO:0009279,GO:0016020,GO:0016021,GO:0016298,GO:0016787,GO:0016788,GO:0019867,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031975,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044425,GO:0044462,GO:0044464,GO:0045203,GO:0046872,GO:0046983,GO:0052689,GO:0071944 3.1.1.32,3.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 295.0
YYD2_k127_3104450_2 Trypsin-like serine protease K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005084 286.0
YYD2_k127_3104450_3 SMART protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.000000000000000000000000000000000006061 157.0
YYD2_k127_3104819_0 AMP-binding enzyme K00666,K12423,K12428 - - 0.0 1159.0
YYD2_k127_3104819_1 PFAM Acetyl-CoA hydrolase transferase K01067 - 3.1.2.1 2.03e-205 653.0
YYD2_k127_3104819_2 Cys/Met metabolism PLP-dependent enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 422.0
YYD2_k127_3104819_3 methyltransferase K00563,K10947 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008270,GO:0008649,GO:0008757,GO:0008989,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046914,GO:0052912,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.187 0.000000000000000000000000000000000000000000000000000000000006624 229.0
YYD2_k127_3104819_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000008396 170.0
YYD2_k127_3119188_0 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 7.635e-303 942.0
YYD2_k127_3119188_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. K12266 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 567.0
YYD2_k127_3119188_2 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03696 - - 0.00000000000000000000000000000000000000000000000000000000003144 226.0
YYD2_k127_313444_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 8.894e-264 828.0
YYD2_k127_313444_1 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 472.0
YYD2_k127_313444_10 BlaR1 peptidase M56 - - - 0.000000000002945 77.0
YYD2_k127_313444_2 Histidinol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007524 446.0
YYD2_k127_313444_3 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 348.0
YYD2_k127_313444_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004464 289.0
YYD2_k127_313444_5 Imidazoleglycerol-phosphate dehydratase K00817,K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.9,3.1.3.15,4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000002899 251.0
YYD2_k127_313444_6 Glutamine amidotransferase class-I K02501 - - 0.000000000000000000000000000000000000000000007768 178.0
YYD2_k127_313444_7 PFAM TspO MBR family K05770 - - 0.000000000000000000000000000000000000000004777 178.0
YYD2_k127_313444_8 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000003013 156.0
YYD2_k127_313444_9 PspC domain - - - 0.0000000000002658 76.0
YYD2_k127_3155237_0 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009707 430.0
YYD2_k127_3155237_1 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003977 391.0
YYD2_k127_3155237_2 Protein phosphatase 2C domain K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 393.0
YYD2_k127_3155237_3 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000012 255.0
YYD2_k127_3155237_4 May be involved in the transport of PQQ or its precursor to the periplasm K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000001064 227.0
YYD2_k127_3155237_5 Molybdate ABC transporter K02018 - - 0.0000000000000000000000000000000000000000000000000000000000002057 218.0
YYD2_k127_3155237_6 Molybdenum ABC transporter K02020 - - 0.000000000000000000000000000000000000000002413 165.0
YYD2_k127_3155237_7 Cupin domain - - - 0.0000000000000000000000000106 118.0
YYD2_k127_3155237_8 CAAX prenyl protease N-terminal, five membrane helices - - - 0.00000000000000000000006852 98.0
YYD2_k127_3155237_9 Multicopper oxidase - - - 0.00000000000000000003454 100.0
YYD2_k127_3157046_0 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 308.0
YYD2_k127_3157046_1 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000001591 143.0
YYD2_k127_3157046_2 ABC-type uncharacterized transport system K01992 - - 0.000000000000000000000000000000000005505 157.0
YYD2_k127_3157046_3 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000007885 141.0
YYD2_k127_3157046_4 Domain of unknown function (DUF4340) - - - 0.00000000000645 79.0
YYD2_k127_3157046_5 Protein of unknown function (DUF721) - - - 0.000001863 58.0
YYD2_k127_3157046_6 Protein-disulfide isomerase - - - 0.00001872 47.0
YYD2_k127_3183611_0 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000008901 244.0
YYD2_k127_3191031_0 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004884 262.0
YYD2_k127_319274_0 Amidohydrolase family - - - 1.074e-280 910.0
YYD2_k127_319274_1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K05587 - 1.6.5.3 5.172e-225 719.0
YYD2_k127_319274_10 Cupin domain - - - 0.000001131 63.0
YYD2_k127_319274_2 Coenzyme F420-reducing hydrogenase, alpha subunit K00436 - 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008275 623.0
YYD2_k127_319274_3 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K05588 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 331.0
YYD2_k127_319274_4 PFAM Respiratory-chain NADH dehydrogenase 24 Kd subunit K05586 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000001429 194.0
YYD2_k127_319274_5 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit K18007 - 1.12.1.2 0.0000000000000000000000000000000000000000000000001147 196.0
YYD2_k127_319274_6 NYN domain - - - 0.000000000000000000000000000002894 124.0
YYD2_k127_319274_7 Acetyltransferase (GNAT) domain - GO:0003674,GO:0003824,GO:0016740,GO:0016746,GO:0016747 - 0.00000000000000000000000002127 121.0
YYD2_k127_319274_8 hydrogenase maturation protease - - - 0.00000000001517 78.0
YYD2_k127_319274_9 Prephenate dehydrogenase chorismate mutase K00210 - 1.3.1.12 0.0000001749 55.0
YYD2_k127_3194210_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00520 - 1.16.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 520.0
YYD2_k127_3194210_1 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 474.0
YYD2_k127_3194210_2 Histidine-specific methyltransferase, SAM-dependent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 306.0
YYD2_k127_320903_0 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 1.934e-196 621.0
YYD2_k127_320903_1 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000009322 76.0
YYD2_k127_3229532_0 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 434.0
YYD2_k127_3229532_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009223 409.0
YYD2_k127_3229532_2 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01885,K01894 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000571 350.0
YYD2_k127_3229532_3 Rhodanese Homology Domain K01011 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000002087 148.0
YYD2_k127_3229532_4 Cysteine-rich secretory protein family - - - 0.00000000000000000000001539 113.0
YYD2_k127_3229793_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 1.914e-247 781.0
YYD2_k127_3229793_1 Protein of unknown function (DUF971) K03593 - - 0.0000000000000000004149 89.0
YYD2_k127_3244294_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 7.37e-234 741.0
YYD2_k127_3244294_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 443.0
YYD2_k127_3244294_2 Glucokinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008645 256.0
YYD2_k127_3244294_3 Psort location CytoplasmicMembrane, score K09793 - - 0.000000000000000000003384 111.0
YYD2_k127_3251088_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 550.0
YYD2_k127_3251088_1 Thrombospondin type 3 repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 306.0
YYD2_k127_3251088_2 Endonuclease Exonuclease Phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000001357 211.0
YYD2_k127_3251088_3 DoxX - - - 0.000000000000002396 88.0
YYD2_k127_3251088_4 Rhodanese Homology Domain - - - 0.00000000000001447 87.0
YYD2_k127_3251088_5 IMP dehydrogenase activity K04767,K07182 - - 0.00000000000002941 87.0
YYD2_k127_3251088_6 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000007864 63.0
YYD2_k127_3261601_0 pseudouridine synthase activity K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007424 329.0
YYD2_k127_3261601_1 lipolytic protein G-D-S-L family - - - 0.0001468 54.0
YYD2_k127_3264460_0 Formiminotransferase-cyclodeaminase K00603,K13990 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006518 597.0
YYD2_k127_3264460_1 asparaginase K01424,K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.1,3.5.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009381 391.0
YYD2_k127_3264460_2 Fic/DOC family - - - 0.000000000000000000000000000000000000000000000000000000008005 211.0
YYD2_k127_3264460_3 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000000000000000000000000000001311 151.0
YYD2_k127_3264460_4 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000004133 143.0
YYD2_k127_3264460_5 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 GO:0000041,GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006825,GO:0008150,GO:0015677,GO:0016020,GO:0030001,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0051179,GO:0051234,GO:0071944 3.6.3.54 0.000000000000000000000000001119 113.0
YYD2_k127_3268768_0 RES domain protein - - - 0.0000000000000000000000000226 120.0
YYD2_k127_3268768_1 enterobactin catabolic process K07214 - - 0.0000000000000000000000001914 116.0
YYD2_k127_3268768_2 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.00000000000000000000005829 113.0
YYD2_k127_3268768_3 COG2146 Ferredoxin subunits of nitrite reductase and K00363,K05710 - 1.7.1.15 0.000000000000000002564 100.0
YYD2_k127_3268768_4 Protein of unknown function (DUF2384) - - - 0.00000000229 65.0
YYD2_k127_3362901_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281 - 1.4.4.2 3.969e-227 711.0
YYD2_k127_3362901_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 431.0
YYD2_k127_3362901_10 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000001873 169.0
YYD2_k127_3362901_11 Belongs to the CDS family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.0000000000000000000000000000000000000003417 159.0
YYD2_k127_3362901_12 Cytochrome c assembly protein - - - 0.000000000000000000000000000001184 131.0
YYD2_k127_3362901_13 Phosphodiester glycosidase - - - 0.000000000000000000000000000009669 128.0
YYD2_k127_3362901_14 uroporphyrinogen-III synthase activity K01719,K01749,K02496,K13542,K13543 GO:0003674,GO:0003824,GO:0004852,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.107,2.5.1.61,4.2.1.75 0.000000000000000000000005131 118.0
YYD2_k127_3362901_15 TIGRFAM competence protein ComEA helix-hairpin-helix repeat K02237 - - 0.00000000000005203 79.0
YYD2_k127_3362901_16 SnoaL-like polyketide cyclase K06893 - - 0.00000007721 63.0
YYD2_k127_3362901_2 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 380.0
YYD2_k127_3362901_3 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006005 376.0
YYD2_k127_3362901_4 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007614 368.0
YYD2_k127_3362901_5 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 294.0
YYD2_k127_3362901_6 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000001081 260.0
YYD2_k127_3362901_7 Peptidase family M50 K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000002439 258.0
YYD2_k127_3362901_8 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000007011 179.0
YYD2_k127_3362901_9 XanTHIne and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.00000000000000000000000000000000000000006257 161.0
YYD2_k127_3363370_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 1.125e-199 663.0
YYD2_k127_3363370_1 Enoyl-CoA hydratase isomerase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007061 544.0
YYD2_k127_3363370_10 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 330.0
YYD2_k127_3363370_11 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000557 319.0
YYD2_k127_3363370_12 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000006467 281.0
YYD2_k127_3363370_13 Cell division ATP-binding protein ftsE K09811,K09812 GO:0000166,GO:0000287,GO:0000910,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007049,GO:0008144,GO:0008150,GO:0008356,GO:0009898,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019897,GO:0019898,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0030145,GO:0030554,GO:0031234,GO:0032153,GO:0032506,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042173,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043937,GO:0043938,GO:0044085,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0046677,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1902531 - 0.000000000000000000000000000000000000000000000000000000000000000000002886 250.0
YYD2_k127_3363370_14 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000005198 207.0
YYD2_k127_3363370_15 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000005641 177.0
YYD2_k127_3363370_16 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000006864 151.0
YYD2_k127_3363370_17 aminopeptidase - - - 0.0000000000000000000000000000000000002113 163.0
YYD2_k127_3363370_18 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.000000000000000000000002632 118.0
YYD2_k127_3363370_19 Belongs to the SEDS family K03588 - - 0.000000000000000000009412 102.0
YYD2_k127_3363370_2 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 490.0
YYD2_k127_3363370_20 Response regulator receiver - - - 0.000000000000001795 82.0
YYD2_k127_3363370_21 transcriptional regulator, SARP family - - - 0.00000002986 66.0
YYD2_k127_3363370_3 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006378 527.0
YYD2_k127_3363370_4 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 482.0
YYD2_k127_3363370_5 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008961 450.0
YYD2_k127_3363370_6 phosphorelay signal transduction system K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 411.0
YYD2_k127_3363370_7 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007828 425.0
YYD2_k127_3363370_8 to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006578 430.0
YYD2_k127_3363370_9 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 354.0
YYD2_k127_3364163_0 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005126 577.0
YYD2_k127_3366488_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 492.0
YYD2_k127_3366488_1 COG0147 Anthranilate para-aminobenzoate synthases component I K01665 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.6.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000001366 249.0
YYD2_k127_3366488_2 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00826 - 2.6.1.42 0.000000000000000000000000001264 129.0
YYD2_k127_3379140_0 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000001493 198.0
YYD2_k127_3379140_1 ADP-ribosylation factor family K06883 - - 0.0000000000000000000000000000000000000004338 168.0
YYD2_k127_3379140_2 Response regulator receiver K02483,K07658,K07668 - - 0.0000000000000000000000000000000558 131.0
YYD2_k127_3379140_3 His Kinase A (phospho-acceptor) domain - - - 0.000000000000003965 89.0
YYD2_k127_338049_0 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 586.0
YYD2_k127_338049_1 cell shape determining protein MreB K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 538.0
YYD2_k127_338049_2 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009358 475.0
YYD2_k127_338049_3 peptidoglycan glycosyltransferase activity K05837 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008360,GO:0016020,GO:0022603,GO:0022604,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008685 272.0
YYD2_k127_338049_4 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000009307 218.0
YYD2_k127_338049_5 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000485 138.0
YYD2_k127_338049_6 peptidyl-tyrosine sulfation - - - 0.00000000000008616 87.0
YYD2_k127_338049_7 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010106,GO:0019725,GO:0030003,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042592,GO:0042594,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071496,GO:0098771 - 0.000000000001283 73.0
YYD2_k127_338049_8 FecR protein - - - 0.000000000874 71.0
YYD2_k127_3382902_0 DEAD/H associated K03724 - - 1.194e-303 962.0
YYD2_k127_3382902_1 TIGRFAM phytoene desaturase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 4.765e-223 702.0
YYD2_k127_3382902_10 SPTR CopG domain protein DNA-binding domain protein - - - 0.00000000000000000000000000738 114.0
YYD2_k127_3382902_11 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.00000000000000000000000004469 115.0
YYD2_k127_3382902_14 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.00007487 55.0
YYD2_k127_3382902_2 Flavin containing amine oxidoreductase - - - 7.862e-215 680.0
YYD2_k127_3382902_3 AbgT putative transporter family K12942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 638.0
YYD2_k127_3382902_4 PFAM histone deacetylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003674 415.0
YYD2_k127_3382902_5 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 372.0
YYD2_k127_3382902_6 Aldehyde dehydrogenase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003389 310.0
YYD2_k127_3382902_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000006592 260.0
YYD2_k127_3382902_8 Calcineurin-like phosphoesterase K06953 - - 0.00000000000000000000000000000000000000000000000000000000000001299 230.0
YYD2_k127_3382902_9 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000001656 191.0
YYD2_k127_3382994_0 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002465 285.0
YYD2_k127_3382994_1 PD-(D/E)XK nuclease superfamily - - - 0.0000000000001845 81.0
YYD2_k127_3385893_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 341.0
YYD2_k127_3385893_1 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002128 271.0
YYD2_k127_3385893_10 Cytochrome c-type biogenesis protein K02200 - - 0.0008114 50.0
YYD2_k127_3385893_2 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000004128 229.0
YYD2_k127_3385893_3 Biogenesis protein - - - 0.00000000000000000000000000000000000000000000000000000904 201.0
YYD2_k127_3385893_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000005693 171.0
YYD2_k127_3385893_5 PFAM von Willebrand factor type A - - - 0.000000000000000000000000000002045 140.0
YYD2_k127_3385893_6 Tellurite resistance protein TerB - - - 0.000000000000000000000000001021 128.0
YYD2_k127_3385893_7 Tetratricopeptide repeat - - - 0.000000000001403 76.0
YYD2_k127_3385893_8 Major facilitator Superfamily - - - 0.00002723 54.0
YYD2_k127_3385893_9 repeat-containing protein - - - 0.0004576 51.0
YYD2_k127_3398178_0 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004486 298.0
YYD2_k127_3398178_1 SUF system FeS assembly protein, NifU family K04488 - - 0.0000000000000000000000000000000000000000000000000007536 191.0
YYD2_k127_3398178_2 metal-sulfur cluster biosynthetic enzyme K02612 - - 0.000000000000000000000000000000001437 132.0
YYD2_k127_3398178_3 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000004356 118.0
YYD2_k127_340997_0 Serine dehydratase K01752 - 4.3.1.17 1.832e-239 752.0
YYD2_k127_340997_1 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 464.0
YYD2_k127_340997_2 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 376.0
YYD2_k127_340997_3 PQQ-like domain - - - 0.00000000000000000000000000000000004494 151.0
YYD2_k127_340997_4 Involved in the TonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000002174 144.0
YYD2_k127_3412862_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003737 294.0
YYD2_k127_3412862_1 serine threonine protein kinase K08884,K11912,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000009449 175.0
YYD2_k127_3412862_2 amidohydrolase K07045 - - 0.0002337 54.0
YYD2_k127_345159_0 Belongs to the short-chain dehydrogenases reductases (SDR) family K12420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005221 434.0
YYD2_k127_345159_1 PFAM asparagine synthase K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007782 385.0
YYD2_k127_345159_2 PFAM 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000006327 222.0
YYD2_k127_3462725_0 Predicted membrane protein (DUF2339) - - - 0.000000000000000000000000000000000000001716 169.0
YYD2_k127_3462725_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.00007233 49.0
YYD2_k127_3490540_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07788,K07789,K18138 - - 0.0 1233.0
YYD2_k127_3490540_1 ABC transporter K15738 - - 1.771e-244 774.0
YYD2_k127_3490540_2 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01667 - 4.1.99.1 1.75e-199 630.0
YYD2_k127_3490540_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.00000000000000000000000000000000000000000000000000000000000002751 223.0
YYD2_k127_3490540_4 - - - - 0.00000000000000000000000000001655 125.0
YYD2_k127_3490540_6 Uncharacterised protein family UPF0066 - - - 0.0000000001381 62.0
YYD2_k127_3497168_0 Phosphate acyltransferases K00655,K01897 - 2.3.1.51,6.2.1.3 4.612e-228 735.0
YYD2_k127_3497168_1 Tricorn protease C1 domain K08676 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007591 261.0
YYD2_k127_3497168_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000008788 220.0
YYD2_k127_3497168_3 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000699 228.0
YYD2_k127_3500972_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 387.0
YYD2_k127_3500972_1 GTP binding K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002898 278.0
YYD2_k127_3500972_2 Metallo-beta-lactamase superfamily K02238 - - 0.00000000000000000000000000000000000000000000000000000000008207 233.0
YYD2_k127_3500972_3 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000003049 211.0
YYD2_k127_3500972_4 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000001192 189.0
YYD2_k127_3500972_5 bacterial (prokaryotic) histone like domain K03530 - - 0.0000000000000000000000000000006875 123.0
YYD2_k127_3500972_6 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.000000000000000003837 95.0
YYD2_k127_3500972_7 ribonuclease BN - - - 0.00000000000005556 86.0
YYD2_k127_3500972_8 PFAM PEGA domain - - - 0.000006379 58.0
YYD2_k127_3512424_0 FtsX-like permease family K02004 - - 5.667e-262 832.0
YYD2_k127_3512424_1 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009438 473.0
YYD2_k127_3512424_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005427 272.0
YYD2_k127_3512424_3 - K00241 - - 0.00000000000000000000000000000000000000000000000000000000000000003849 230.0
YYD2_k127_3512424_4 Domain of unknown function (DUF4328) - - - 0.00000000000000001659 93.0
YYD2_k127_3530658_0 Sulfate transporter subunit K02048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 479.0
YYD2_k127_3530658_1 sulfate ABC transporter, inner membrane subunit CysT K02046,K15496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 387.0
YYD2_k127_3530658_2 sulfate transport system, permease K02047 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007937 369.0
YYD2_k127_3530658_3 His Kinase A (phosphoacceptor) domain K07641,K10819 - 2.7.13.3 0.0000000000000000000002801 107.0
YYD2_k127_3530915_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1626.0
YYD2_k127_3530915_1 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 529.0
YYD2_k127_3530915_10 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000008325 238.0
YYD2_k127_3530915_11 GAF domain - - - 0.0000000000000000000000000000000000000000000000002256 200.0
YYD2_k127_3530915_12 AMP binding - - - 0.0000000000000000000001225 106.0
YYD2_k127_3530915_13 cheY-homologous receiver domain - - - 0.0000000000000000000002198 104.0
YYD2_k127_3530915_14 cheY-homologous receiver domain - - - 0.000000000000000003785 89.0
YYD2_k127_3530915_15 - - - - 0.0000000000000001676 85.0
YYD2_k127_3530915_2 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 511.0
YYD2_k127_3530915_3 response regulator K02481,K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 492.0
YYD2_k127_3530915_4 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 417.0
YYD2_k127_3530915_5 Phage integrase, N-terminal SAM-like domain K03733,K04763 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006042 285.0
YYD2_k127_3530915_6 Putative neutral zinc metallopeptidase K07054 GO:0005575,GO:0005576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000005705 248.0
YYD2_k127_3530915_7 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005137 265.0
YYD2_k127_3530915_8 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000001109 255.0
YYD2_k127_3530915_9 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000002457 253.0
YYD2_k127_353229_0 PFAM aminotransferase, class I K10907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352 509.0
YYD2_k127_353229_1 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000001535 209.0
YYD2_k127_353229_2 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000005764 124.0
YYD2_k127_3565947_0 B12 binding domain K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.0 1552.0
YYD2_k127_3565947_1 Molybdopterin oxidoreductase, iron-sulfur binding subunit K00184 - - 5.974e-285 917.0
YYD2_k127_3565947_10 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000000000000000000000000000002867 206.0
YYD2_k127_3565947_11 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000000000000000000000000000003637 201.0
YYD2_k127_3565947_12 Protein of unknown function (DUF3179) - - - 0.00000000000000000000000000000000000000000000000005311 191.0
YYD2_k127_3565947_13 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000003564 181.0
YYD2_k127_3565947_14 Cytochrome oxidase assembly protein K02259 - - 0.00000000000000000000000000000000000000778 162.0
YYD2_k127_3565947_15 cell redox homeostasis K02199,K03671 - - 0.00000000000000000000000000000000112 137.0
YYD2_k127_3565947_16 COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3 K02276 - 1.9.3.1 0.00000000000000000000000000001314 130.0
YYD2_k127_3565947_17 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.000000000000000000004037 96.0
YYD2_k127_3565947_18 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000001503 94.0
YYD2_k127_3565947_19 mannose metabolic process K01191 - 3.2.1.24 0.000001127 58.0
YYD2_k127_3565947_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.177e-244 767.0
YYD2_k127_3565947_20 COG0457 FOG TPR repeat - - - 0.000005536 59.0
YYD2_k127_3565947_3 Polysulphide reductase K00185 - - 8.555e-225 706.0
YYD2_k127_3565947_4 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006876 360.0
YYD2_k127_3565947_5 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 353.0
YYD2_k127_3565947_6 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000913 301.0
YYD2_k127_3565947_7 Heme copper-type cytochrome quinol oxidase, subunit K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004052 284.0
YYD2_k127_3565947_8 Domain of unknown function (DUF4143) K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001147 280.0
YYD2_k127_3565947_9 signal sequence binding K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006979 262.0
YYD2_k127_3576415_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 441.0
YYD2_k127_3576415_1 Two component regulator propeller - - - 0.000000000001034 81.0
YYD2_k127_3582875_0 Transglycosylase K05365,K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 391.0
YYD2_k127_3582875_1 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006997 295.0
YYD2_k127_3582875_2 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000004799 246.0
YYD2_k127_3582875_3 Protein of unknown function (DUF2959) - - - 0.000000000000000000000000000000000000000000000000000000001834 207.0
YYD2_k127_3582875_4 translation initiation factor activity K06996 - - 0.0000000000000000000000000000000000000003575 154.0
YYD2_k127_3582875_5 hydrolase activity, acting on ester bonds K01259 - 3.4.11.5 0.000000000452 72.0
YYD2_k127_3583527_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009816 530.0
YYD2_k127_3583527_1 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 516.0
YYD2_k127_3583527_2 PFAM alpha amylase, catalytic K01208 - 3.2.1.133,3.2.1.135,3.2.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009716 309.0
YYD2_k127_3583527_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008038 323.0
YYD2_k127_3583527_4 - - - - 0.00000000002218 69.0
YYD2_k127_3622664_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004757 410.0
YYD2_k127_3622664_1 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 409.0
YYD2_k127_3622664_2 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003929 352.0
YYD2_k127_367491_0 Subtilase family - - - 0.00000000000000000000000000000001258 148.0
YYD2_k127_3690974_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 1.176e-248 782.0
YYD2_k127_3690974_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016625,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0030312,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046872,GO:0047553,GO:0055114,GO:0071704,GO:0071944,GO:0072350 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009323 465.0
YYD2_k127_3690974_2 COGs COG2912 conserved - - - 0.000000000000000000000000000000000000000000000000000000001587 221.0
YYD2_k127_3690974_3 Cystathionine beta-synthase K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000258 208.0
YYD2_k127_3690974_4 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000003063 187.0
YYD2_k127_3690974_5 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000009309 108.0
YYD2_k127_3690974_6 - - - - 0.00001519 55.0
YYD2_k127_3759042_0 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 420.0
YYD2_k127_3759042_1 Metalloenzyme superfamily - - - 0.00000000000000000000000000000000000000000000002093 183.0
YYD2_k127_3759042_2 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000008007 95.0
YYD2_k127_3759042_3 COG1555 DNA uptake protein and related DNA-binding proteins - - - 0.00000000000000001656 91.0
YYD2_k127_3763819_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000758 538.0
YYD2_k127_3763819_1 Catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 439.0
YYD2_k127_3763819_10 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000000000007842 180.0
YYD2_k127_3763819_11 - - - - 0.000000000000000000000000000000000000000001388 159.0
YYD2_k127_3763819_12 - - - - 0.00000000000000000000000000000009479 131.0
YYD2_k127_3763819_13 sequence-specific DNA binding K07729 - - 0.00000000000000003778 91.0
YYD2_k127_3763819_14 Thioesterase superfamily - - - 0.00000000000001075 81.0
YYD2_k127_3763819_2 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 410.0
YYD2_k127_3763819_3 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 336.0
YYD2_k127_3763819_4 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007582 300.0
YYD2_k127_3763819_5 PFAM carbonic anhydrase K01674 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007561 292.0
YYD2_k127_3763819_6 DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001251 275.0
YYD2_k127_3763819_7 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000000000000000000000000001666 222.0
YYD2_k127_3763819_8 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000000000000000146 215.0
YYD2_k127_3763819_9 SnoaL-like domain K06893 - - 0.000000000000000000000000000000000000000000000000000703 188.0
YYD2_k127_3770500_0 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001095 291.0
YYD2_k127_3770500_1 epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001273 254.0
YYD2_k127_3770500_2 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000001263 75.0
YYD2_k127_378585_0 Alanine-glyoxylate amino-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 302.0
YYD2_k127_378585_1 Exopolysaccharide synthesis, ExoD - - - 0.00000000000008237 80.0
YYD2_k127_3798157_0 Elongation factor SelB, winged helix K03833 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 422.0
YYD2_k127_3798157_1 histidine kinase A domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006049 303.0
YYD2_k127_3798157_2 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000001195 245.0
YYD2_k127_3798157_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000178 215.0
YYD2_k127_3798157_4 protein secretion K03116 - - 0.000000000003932 70.0
YYD2_k127_3798157_5 Transcriptional activator domain - - - 0.00000005099 64.0
YYD2_k127_3798157_6 Iron-regulated protein - - - 0.000004268 59.0
YYD2_k127_3798157_7 Helix-turn-helix XRE-family like proteins - - - 0.0004154 50.0
YYD2_k127_38354_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370,K07306,K17050 - 1.7.5.1,1.8.5.3 0.0 1274.0
YYD2_k127_38354_1 PFAM Cytochrome b b6 domain - - - 1.263e-196 636.0
YYD2_k127_38354_10 YwiC-like protein - - - 0.000006103 57.0
YYD2_k127_38354_11 Transporter, hydrophobe amphiphile efflux-1 (HAE1) family K18138 - - 0.0001195 55.0
YYD2_k127_38354_2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003993 539.0
YYD2_k127_38354_3 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 537.0
YYD2_k127_38354_4 PFAM Rieske 2Fe-2S domain protein K00479,K00499 - 1.14.15.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 357.0
YYD2_k127_38354_5 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000006025 244.0
YYD2_k127_38354_6 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000003808 221.0
YYD2_k127_38354_7 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000002066 160.0
YYD2_k127_38354_8 PFAM Rieske 2Fe-2S domain K02636,K03886 - 1.10.9.1 0.00000000000005596 86.0
YYD2_k127_38354_9 Hemerythrin HHE cation binding domain - - - 0.0000000008905 65.0
YYD2_k127_3850309_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 549.0
YYD2_k127_3850309_1 TRAP transporter T-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003935 264.0
YYD2_k127_3850309_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.00000000000000000000000000000000000000000002375 183.0
YYD2_k127_3850309_3 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.0000000000000000000000000000000000000008276 169.0
YYD2_k127_385149_0 Carbon starvation protein K06200 - - 6e-208 666.0
YYD2_k127_385149_1 NapC/NirT cytochrome c family, N-terminal region - GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0044237,GO:0044425,GO:0045333,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005047 529.0
YYD2_k127_385149_10 SurA N-terminal domain K03769 - 5.2.1.8 0.000000000000000000000000000000000000006642 160.0
YYD2_k127_385149_11 Universal stress protein - - - 0.00000000000000006133 87.0
YYD2_k127_385149_12 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000001815 71.0
YYD2_k127_385149_13 selT selW selH selenoprotein K07401 - - 0.000000000004254 67.0
YYD2_k127_385149_14 Histidine kinase K02484,K07649,K10819,K19622,K20975 - 2.7.13.3 0.000002799 57.0
YYD2_k127_385149_15 Predicted membrane protein (DUF2231) - - - 0.000004636 59.0
YYD2_k127_385149_16 dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes K13356 - 1.2.1.84 0.00001639 54.0
YYD2_k127_385149_17 YCII-related domain K09780 - - 0.0001207 56.0
YYD2_k127_385149_2 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009361 463.0
YYD2_k127_385149_3 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 426.0
YYD2_k127_385149_4 Domain present in PSD-95, Dlg, and ZO-1/2. K08070 - 1.3.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 359.0
YYD2_k127_385149_5 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000904 333.0
YYD2_k127_385149_6 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004477 268.0
YYD2_k127_385149_7 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000002811 201.0
YYD2_k127_385149_8 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000008505 181.0
YYD2_k127_385149_9 COG0534 Na -driven multidrug efflux pump K03327 - - 0.000000000000000000000000000000000000000000007427 173.0
YYD2_k127_3889694_0 Sodium/calcium exchanger protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 567.0
YYD2_k127_3889694_1 Protein of unknown function (DUF3300) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 380.0
YYD2_k127_3889694_2 Protein of unknown function (DUF2950) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 375.0
YYD2_k127_3889694_3 PFAM Response regulator receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000005349 243.0
YYD2_k127_3889694_4 signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000001881 233.0
YYD2_k127_3889694_5 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000008973 226.0
YYD2_k127_3889694_6 Sortase family K07284 - 3.4.22.70 0.0000000000000000000000000000000000000000000000001335 184.0
YYD2_k127_3889694_7 - - - - 0.000000000000000000000000000000000000000004048 171.0
YYD2_k127_3889694_8 - - - - 0.00000000000000000000006987 104.0
YYD2_k127_3890211_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007914 291.0
YYD2_k127_3890211_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000003741 158.0
YYD2_k127_3890211_2 Peptidase family M23 K21471 - - 0.000000000000000000000000000000000003673 154.0
YYD2_k127_3890211_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000002512 135.0
YYD2_k127_3890211_4 COG0457 FOG TPR repeat - - - 0.000000001296 70.0
YYD2_k127_3911384_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.184e-256 805.0
YYD2_k127_3911384_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 376.0
YYD2_k127_3911384_10 HlyD family secretion protein K02005 - - 0.000000000000000000000000000000000005179 158.0
YYD2_k127_3911384_11 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000008768 142.0
YYD2_k127_3911384_12 HD domain - - - 0.00000000000000000000000000001943 124.0
YYD2_k127_3911384_13 YbbR-like protein - - - 0.0000000002682 72.0
YYD2_k127_3911384_14 MacB-like periplasmic core domain K02004 - - 0.0004353 44.0
YYD2_k127_3911384_15 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01993,K16922 - - 0.0005501 52.0
YYD2_k127_3911384_2 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 388.0
YYD2_k127_3911384_3 COG0577 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 360.0
YYD2_k127_3911384_4 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008448 285.0
YYD2_k127_3911384_5 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000001052 265.0
YYD2_k127_3911384_6 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.00000000000000000000000000000000000000000000000000000002354 207.0
YYD2_k127_3911384_7 pfam abc K01990 - - 0.0000000000000000000000000000000000000000000000000000001496 199.0
YYD2_k127_3911384_8 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000003437 176.0
YYD2_k127_3911384_9 membrane-fusion protein - - - 0.00000000000000000000000000000000000000002499 175.0
YYD2_k127_3940914_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004218 594.0
YYD2_k127_3940914_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009977 463.0
YYD2_k127_3940914_10 Phospholipid methyltransferase - - - 0.0000000000000000001181 101.0
YYD2_k127_3940914_11 serine threonine protein kinase - - - 0.000000008993 68.0
YYD2_k127_3940914_2 ABC transporter K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007495 449.0
YYD2_k127_3940914_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005888 419.0
YYD2_k127_3940914_4 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000008163 269.0
YYD2_k127_3940914_5 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.000000000000000000000000000000000000000000000000000000752 209.0
YYD2_k127_3940914_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000007156 179.0
YYD2_k127_3940914_7 lipid a biosynthesis - - - 0.00000000000000000000000000000001224 131.0
YYD2_k127_3940914_8 von Willebrand factor, type A K12511 - - 0.00000000000000000000118 107.0
YYD2_k127_3940914_9 serine threonine protein kinase - - - 0.00000000000000000001266 102.0
YYD2_k127_3982216_0 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006539 267.0
YYD2_k127_3982216_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000002057 255.0
YYD2_k127_3982216_2 ATP synthesis coupled proton transport K02109 - - 0.00000000000000000000000001823 125.0
YYD2_k127_3982216_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000001014 93.0
YYD2_k127_3982216_4 COG0515 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000007479 79.0
YYD2_k127_3982216_5 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.00008505 48.0
YYD2_k127_3996780_0 Superfamily II DNA RNA helicases, SNF2 family - - - 8.477e-320 1005.0
YYD2_k127_3996780_1 Phosphate transporter family K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 380.0
YYD2_k127_3996780_2 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000001147 186.0
YYD2_k127_3996780_3 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K07443 - - 0.000000000000000000002015 98.0
YYD2_k127_3996780_4 Diguanylate cyclase - - - 0.00000000000000000004791 100.0
YYD2_k127_4000412_0 Penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 569.0
YYD2_k127_4000412_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000007801 261.0
YYD2_k127_4005330_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005255 515.0
YYD2_k127_4005330_1 Threonine aldolase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004503 338.0
YYD2_k127_4005330_2 ArgK protein K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 298.0
YYD2_k127_4005330_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.000000000000000000000000000000000000004779 164.0
YYD2_k127_4005330_4 Involved in the biosynthesis of porphyrin-containing compound - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000292 115.0
YYD2_k127_4036347_0 synthetase (ADP forming), alpha K01905,K09181,K22224 - 6.2.1.13 2.084e-214 689.0
YYD2_k127_4036347_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004622 529.0
YYD2_k127_4036347_10 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000001167 175.0
YYD2_k127_4036347_11 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000001995 174.0
YYD2_k127_4036347_12 domain, Protein - - - 0.0000000000000000000000000000000000000000008969 178.0
YYD2_k127_4036347_13 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.0000000000000000000000000000000000000000381 161.0
YYD2_k127_4036347_14 TPM domain K08988 - - 0.000000000000000000000000000000005102 147.0
YYD2_k127_4036347_15 acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.000000000000000000000000001303 118.0
YYD2_k127_4036347_16 PASTA K12132 - 2.7.11.1 0.000000000000000002652 95.0
YYD2_k127_4036347_17 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000004776 86.0
YYD2_k127_4036347_18 Tetratricopeptide repeat - - - 0.00000000007238 76.0
YYD2_k127_4036347_2 Saccharopine dehydrogenase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003292 344.0
YYD2_k127_4036347_3 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000005793 277.0
YYD2_k127_4036347_4 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000001449 254.0
YYD2_k127_4036347_5 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002316 254.0
YYD2_k127_4036347_6 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000003436 254.0
YYD2_k127_4036347_7 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000001518 209.0
YYD2_k127_4036347_8 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000592 215.0
YYD2_k127_4036347_9 alpha beta K06889 - - 0.000000000000000000000000000000000000000000000000001644 207.0
YYD2_k127_4039819_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005756 407.0
YYD2_k127_4043988_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 9.89e-321 1005.0
YYD2_k127_4043988_1 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000001088 240.0
YYD2_k127_4043988_2 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000000000000000000000000000000000000003497 167.0
YYD2_k127_4043988_3 cheY-homologous receiver domain - - - 0.0008282 42.0
YYD2_k127_4055217_0 iron dependent repressor K03709 - - 0.0000000000000000000000000000000000000000000000000000001869 207.0
YYD2_k127_4055217_1 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000009225 144.0
YYD2_k127_4055217_2 Protein of unknown function (DUF1573) - - - 0.00002123 55.0
YYD2_k127_4069287_0 ammonia-lyase activity K01745 - 4.3.1.3 5.991e-267 836.0
YYD2_k127_4069287_1 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 385.0
YYD2_k127_4069287_2 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009465 320.0
YYD2_k127_4069287_3 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000001779 149.0
YYD2_k127_4069287_4 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000009791 136.0
YYD2_k127_4069287_5 Diguanylate cyclase - - - 0.00000000000000000001373 103.0
YYD2_k127_4069287_6 - - - - 0.00000000000002997 81.0
YYD2_k127_4073302_0 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases K00174 - 1.2.7.11,1.2.7.3 4.503e-227 745.0
YYD2_k127_4073302_1 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000092 387.0
YYD2_k127_4073302_2 Fe-S cluster K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 294.0
YYD2_k127_4073302_3 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000004918 238.0
YYD2_k127_4073302_4 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00171,K00172,K02573,K03737,K13795,K18930 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000005866 238.0
YYD2_k127_4073302_5 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000007596 219.0
YYD2_k127_4073302_6 - - - - 0.0000000002552 69.0
YYD2_k127_4073302_7 Matrixin - - - 0.0000003622 63.0
YYD2_k127_4073302_8 WD40-like Beta Propeller K03641 - - 0.00004122 57.0
YYD2_k127_4073302_9 - - - - 0.0005504 49.0
YYD2_k127_4079215_0 Transketolase, central region K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006292 526.0
YYD2_k127_4079215_1 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03166 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 503.0
YYD2_k127_4079215_10 Thiol disulfide interchange protein - - - 0.0000000000000001396 90.0
YYD2_k127_4079215_2 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004424 413.0
YYD2_k127_4079215_3 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 366.0
YYD2_k127_4079215_4 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 314.0
YYD2_k127_4079215_5 Sodium:solute symporter family K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002193 303.0
YYD2_k127_4079215_6 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000001013 191.0
YYD2_k127_4079215_7 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000000000000004891 150.0
YYD2_k127_4079215_8 - - - - 0.000000000000000000002336 107.0
YYD2_k127_4089166_0 Dehydrogenase K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003968 410.0
YYD2_k127_4089166_1 PFAM Conserved region in glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000001058 253.0
YYD2_k127_4091826_0 Di-iron-containing protein involved in the repair of iron-sulfur clusters damaged by oxidative and nitrosative stress conditions K07322 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016226,GO:0018282,GO:0018283,GO:0019538,GO:0022607,GO:0030091,GO:0031163,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051186,GO:0071704,GO:0071840,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000004193 201.0
YYD2_k127_4091826_1 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 0.00000000000000000000000000000000000000000002768 179.0
YYD2_k127_4091826_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. K12266 - - 0.00000000000000000000000000000004621 128.0
YYD2_k127_4107054_0 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000002914 216.0
YYD2_k127_4107054_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K02033 - - 0.00000000000000000000000000000000000000000000000000000003032 213.0
YYD2_k127_4107054_2 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation K13598 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.13.3 0.000000000000000000000000000000000000000000000000000001139 206.0
YYD2_k127_4107054_3 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000003849 216.0
YYD2_k127_4107054_4 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000001912 204.0
YYD2_k127_4107054_5 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000003705 130.0
YYD2_k127_4107054_6 - - - - 0.00000001823 63.0
YYD2_k127_4107054_7 Tetratricopeptide repeat - - - 0.000008038 58.0
YYD2_k127_4113992_0 Histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001964 280.0
YYD2_k127_4113992_1 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002987 274.0
YYD2_k127_4113992_2 tRNA pseudouridine synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001497 245.0
YYD2_k127_4113992_3 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000001158 239.0
YYD2_k127_4113992_4 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000005242 169.0
YYD2_k127_4113992_5 Protein of unknown function (DUF1318) - - - 0.000000000000000000000000003098 120.0
YYD2_k127_4118436_0 3-demethylubiquinone-9 3-O-methyltransferase activity K07011,K20444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004442 394.0
YYD2_k127_4118436_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000001461 179.0
YYD2_k127_4118436_3 Tetratricopeptide repeat - - - 0.0000000000000000001217 106.0
YYD2_k127_4118436_4 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000004041 59.0
YYD2_k127_4118436_5 Tetratricopeptide repeat - - - 0.0001847 56.0
YYD2_k127_4121962_0 AMP-binding enzyme K00666,K12423,K12428 - - 0.0 1157.0
YYD2_k127_4121962_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 5.421e-298 937.0
YYD2_k127_4121962_10 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 - 3.6.3.12 0.0000000000000000000000000000000000000000005617 180.0
YYD2_k127_4121962_12 Acetyltransferase (GNAT) domain - - - 0.000000000000000000278 89.0
YYD2_k127_4121962_13 - - - - 0.000000000000000000549 89.0
YYD2_k127_4121962_14 META domain K03929 - - 0.00000000000000002013 98.0
YYD2_k127_4121962_15 Protein of unknown function (DUF3311) - - - 0.000000000001126 72.0
YYD2_k127_4121962_17 Kazal-type serine protease inhibitor domain - - - 0.00003837 49.0
YYD2_k127_4121962_18 Putative metal-binding motif - - - 0.0007669 53.0
YYD2_k127_4121962_2 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 4.415e-210 673.0
YYD2_k127_4121962_3 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031420,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 549.0
YYD2_k127_4121962_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 529.0
YYD2_k127_4121962_5 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 407.0
YYD2_k127_4121962_6 aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001581 295.0
YYD2_k127_4121962_7 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.0000000000000000000000000000000000000000000000000000000000000001508 228.0
YYD2_k127_4121962_8 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor K10672,K10794 - 1.21.4.1,1.21.4.2 0.00000000000000000000000000000000000000000000000001082 185.0
YYD2_k127_4121962_9 Kinase/pyrophosphorylase K09773 - 2.7.11.33,2.7.4.28 0.000000000000000000000000000000000000000000000002732 186.0
YYD2_k127_4126657_0 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001262 283.0
YYD2_k127_4126657_1 protein kinase activity - - - 0.000000000000000000000000000003591 139.0
YYD2_k127_4128572_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 608.0
YYD2_k127_4128572_1 TIGRFAM 6-phosphogluconate dehydrogenase, decarboxylating K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 404.0
YYD2_k127_4128572_2 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000001487 164.0
YYD2_k127_4128572_3 Glucose-6-phosphate dehydrogenase subunit - - - 0.000000000000000000000000000007379 134.0
YYD2_k127_4128572_4 Domain of unknown function (DUF1737) - - - 0.0000000000000000000000219 102.0
YYD2_k127_4128572_5 Phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.000000000000008545 88.0
YYD2_k127_4128572_6 PFAM Plasmid stabilisation system protein - - - 0.00000000000001479 78.0
YYD2_k127_4140677_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03694,K03695 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 434.0
YYD2_k127_4140677_1 metallopeptidase activity K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 378.0
YYD2_k127_4140677_2 metallopeptidase activity K03592 - - 0.000000000000000000000000000000000000000000000000000000000000008366 235.0
YYD2_k127_4140677_3 - - - - 0.000000000000000000000001884 109.0
YYD2_k127_4140677_4 Psort location Cytoplasmic, score K01129 - 3.1.5.1 0.000000000000000000001676 102.0
YYD2_k127_4140677_5 PFAM 4Fe-4S ferredoxin - - - 0.000000002417 65.0
YYD2_k127_4140677_6 PKD domain - - - 0.00002095 57.0
YYD2_k127_4143594_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 1.122e-219 703.0
YYD2_k127_4143594_1 SMART PDZ DHR GLGF domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004963 620.0
YYD2_k127_4143594_2 Acetyl-coenzyme A transporter 1 K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007914 590.0
YYD2_k127_4143594_3 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 456.0
YYD2_k127_4143594_4 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009311 355.0
YYD2_k127_4143594_5 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000007807 192.0
YYD2_k127_4143594_6 TIGRFAM TonB family protein K03832 - - 0.00000006147 66.0
YYD2_k127_4143594_7 tetratricopeptide repeat - - - 0.00002547 56.0
YYD2_k127_4227182_0 homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 2.51e-218 694.0
YYD2_k127_4227182_1 chlorophyll binding K02051,K03286 - - 0.0000000000000000000000000000000000001101 150.0
YYD2_k127_4236233_0 SMART Integrin alpha beta-propellor repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 627.0
YYD2_k127_4236233_1 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000002965 259.0
YYD2_k127_4236233_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.00000000000000000000000000000000000000000000000000000000000002532 217.0
YYD2_k127_4236233_3 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000001839 151.0
YYD2_k127_4238563_0 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004122 536.0
YYD2_k127_4238563_1 Glycosyl transferase family group 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008417 471.0
YYD2_k127_4238563_10 deoxyhypusine monooxygenase activity - - - 0.000000000000000002352 100.0
YYD2_k127_4238563_11 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000001453 59.0
YYD2_k127_4238563_12 PHB depolymerase family esterase - - - 0.00005144 59.0
YYD2_k127_4238563_2 Domain of unknown function (DUF4143) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 416.0
YYD2_k127_4238563_4 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 403.0
YYD2_k127_4238563_5 - - - - 0.000000000000000000000000000000000000000000000000008102 200.0
YYD2_k127_4238563_6 Acetyltransferase (GNAT) domain K03825 - - 0.0000000000000000000000000000000000000000002684 174.0
YYD2_k127_4238563_7 PFAM response regulator receiver K07657 - - 0.00000000000000000000001992 116.0
YYD2_k127_4238563_8 Tetratricopeptide repeat - - - 0.000000000000000000006481 107.0
YYD2_k127_4238563_9 amine dehydrogenase activity K01219 - 3.2.1.81 0.000000000000000002347 103.0
YYD2_k127_42585_0 Insulinase (Peptidase family M16) K07263 - - 1.29e-239 771.0
YYD2_k127_42585_1 formate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 318.0
YYD2_k127_42585_2 denitrification pathway - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009533 260.0
YYD2_k127_42585_3 - - - - 0.000000000000000000000000000000000000000000000000009036 195.0
YYD2_k127_42585_5 Cytochrome c - - - 0.0000000000001046 83.0
YYD2_k127_42585_6 Aminotransferase class I and II K00375 - - 0.00000001311 61.0
YYD2_k127_4325828_0 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 424.0
YYD2_k127_4325828_1 HpcH/HpaI aldolase/citrate lyase family K11390 - - 0.00001871 57.0
YYD2_k127_43285_0 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008749 383.0
YYD2_k127_43285_1 Mitochondrial biogenesis AIM24 - - - 0.000000000002716 66.0
YYD2_k127_4335695_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1379.0
YYD2_k127_4335695_1 DNA alkylation repair - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 299.0
YYD2_k127_4335695_2 pteridine-dependent deoxygenase K18240 - 4.1.3.40,4.1.3.45 0.00000000000000000000000000000000000000000000004303 184.0
YYD2_k127_4337814_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 5.501e-318 986.0
YYD2_k127_4337814_1 FAD linked oxidases, C-terminal domain K18930 - - 7.485e-298 940.0
YYD2_k127_4337814_2 Oxidoreductase molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000345 332.0
YYD2_k127_4337814_3 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 361.0
YYD2_k127_4337814_4 PFAM peptidase, membrane zinc metallopeptidase K06973 - - 0.00000000000000000000000000000000000000000000000000000000000000005555 230.0
YYD2_k127_4337814_5 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703,K20452 - 4.2.1.33,4.2.1.35,4.2.1.85 0.0000000000000000000000000000000000000000000000000000000000000008964 244.0
YYD2_k127_4337814_6 AAA domain - - - 0.0000000000000000000000000000000000000000000000001432 185.0
YYD2_k127_4337814_7 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000000000000002337 181.0
YYD2_k127_4337814_8 Cysteine dioxygenase type I - - - 0.00000000000000000000000000000000007343 141.0
YYD2_k127_4337814_9 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000006602 92.0
YYD2_k127_4340333_0 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0008879,GO:0009058,GO:0009059,GO:0009987,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0033692,GO:0034637,GO:0034645,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0045226,GO:0046379,GO:0046872,GO:0071704,GO:1901576 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 405.0
YYD2_k127_4340333_1 SMART Tetratricopeptide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007286 363.0
YYD2_k127_4340333_2 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 349.0
YYD2_k127_4340333_3 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000164 214.0
YYD2_k127_4340333_4 aminotransferase class I and II - - - 0.000000000000000000000000000000000001698 143.0
YYD2_k127_4352897_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 489.0
YYD2_k127_4352897_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007488 445.0
YYD2_k127_4352897_2 ATP-dependent DNA helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002955 353.0
YYD2_k127_4352897_3 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 0.00001077 47.0
YYD2_k127_436542_0 Nickel-dependent hydrogenase K00436 - 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004739 524.0
YYD2_k127_436542_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 352.0
YYD2_k127_436542_2 2 iron, 2 sulfur cluster binding K02823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 342.0
YYD2_k127_436542_3 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 336.0
YYD2_k127_436542_4 cyclic nucleotide binding K10914 - - 0.000000000000000000000000000000000000000000000000007206 187.0
YYD2_k127_436542_5 inositol 2-dehydrogenase activity - - - 0.00000000000000000000000000000000000000003356 171.0
YYD2_k127_436542_6 PFAM Rhomboid family K19225 - 3.4.21.105 0.0000000000000000000000000004311 121.0
YYD2_k127_4376917_0 flavin-nucleotide-binding protein structurally related to pyridoxine 5-phosphate oxidase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008378 412.0
YYD2_k127_4376917_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009728 366.0
YYD2_k127_4376917_10 ECF sigma factor K03088 - - 0.000159 53.0
YYD2_k127_4376917_2 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000000000003958 244.0
YYD2_k127_4376917_3 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000004975 218.0
YYD2_k127_4376917_4 Polymorphic membrane protein Chlamydia - - - 0.0000000000000000000000000000000000000001686 169.0
YYD2_k127_4376917_5 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000001363 169.0
YYD2_k127_4376917_6 Acyl-transferase K00655 - 2.3.1.51 0.0000000000000000000000000001005 123.0
YYD2_k127_4376917_7 pyridoxamine 5-phosphate - - - 0.0000000000000000001225 94.0
YYD2_k127_4376917_8 - - - - 0.000000000000004033 79.0
YYD2_k127_4376917_9 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000001374 74.0
YYD2_k127_4397883_0 malic enzyme K00027,K00029 - 1.1.1.38,1.1.1.40 1.97e-197 651.0
YYD2_k127_4397883_1 PFAM ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000005325 231.0
YYD2_k127_4397883_2 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.00000000000000000000000000001189 128.0
YYD2_k127_4399538_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 566.0
YYD2_k127_4399538_1 Von Willebrand factor type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006072 490.0
YYD2_k127_4399538_10 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000004576 94.0
YYD2_k127_4399538_11 Tyrosine phosphatase family - - - 0.00000000000000000001579 97.0
YYD2_k127_4399538_12 bacterial OsmY and nodulation domain K04065 - - 0.0000000001783 70.0
YYD2_k127_4399538_13 Bacterial pre-peptidase C-terminal domain - - - 0.000003809 59.0
YYD2_k127_4399538_2 CAAX prenyl protease N-terminal, five membrane helices - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 392.0
YYD2_k127_4399538_3 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 374.0
YYD2_k127_4399538_4 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 316.0
YYD2_k127_4399538_5 AIR carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001377 254.0
YYD2_k127_4399538_6 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000009231 250.0
YYD2_k127_4399538_7 succinate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000001593 231.0
YYD2_k127_4399538_8 Protein of unknown function (DUF423) - - - 0.0000000000000000000000000000000000000000000007707 168.0
YYD2_k127_4399538_9 Transcriptional regulator, Crp Fnr family - - - 0.0000000000000000000000000000003938 143.0
YYD2_k127_4415632_0 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000001533 226.0
YYD2_k127_4415632_1 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000000000001387 208.0
YYD2_k127_4415632_2 hydrolase activity, hydrolyzing O-glycosyl compounds K01208 - 3.2.1.133,3.2.1.135,3.2.1.54 0.00000000000000000007402 101.0
YYD2_k127_442516_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006637 571.0
YYD2_k127_442516_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003625 505.0
YYD2_k127_442516_2 Stage II sporulation protein E K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000001914 183.0
YYD2_k127_442516_3 TGS domain K06944 - - 0.000000000000000000000000000000007261 131.0
YYD2_k127_4451077_0 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004897 402.0
YYD2_k127_4451077_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 309.0
YYD2_k127_4458934_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.843e-221 699.0
YYD2_k127_4458934_1 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 357.0
YYD2_k127_4458934_2 Belongs to the ABC transporter superfamily K02031,K02032,K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007132 349.0
YYD2_k127_4458934_3 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002075 270.0
YYD2_k127_4458934_4 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000001279 153.0
YYD2_k127_4458934_5 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.000000000000000000000000001185 124.0
YYD2_k127_4462894_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000001725 247.0
YYD2_k127_4462894_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000006742 179.0
YYD2_k127_4462894_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000002313 137.0
YYD2_k127_4462894_3 PFAM PEGA domain - - - 0.00000000003681 77.0
YYD2_k127_4474472_0 Pyridoxal-dependent decarboxylase conserved domain K01593 - 4.1.1.105,4.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 524.0
YYD2_k127_4474472_1 - - - - 0.0000000000000000000000002034 117.0
YYD2_k127_4474472_2 rRNA processing K09140 - - 0.0000000000000000000001867 102.0
YYD2_k127_4512508_0 tRNA synthetase class II core domain (G, H, P, S and T) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005907 408.0
YYD2_k127_4512508_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.00000000000000000000000000000006172 139.0
YYD2_k127_4567274_0 epimerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 402.0
YYD2_k127_4567274_1 Glycosyl hydrolases family 39 K01198 - 3.2.1.37 0.0000000000000000001188 105.0
YYD2_k127_4567274_2 DNA alkylation repair enzyme - - - 0.0000000000000001945 85.0
YYD2_k127_4567274_3 bacterial-type flagellum-dependent cell motility K01317 - 3.4.21.10 0.0002581 55.0
YYD2_k127_4590969_0 Dehydrogenase E1 component K00161,K21416 - 1.2.4.1 0.00000000000000000000000000000000000000000001559 182.0
YYD2_k127_4590969_1 DNA RNA helicase - - - 0.00000000000000000000000000000000000004682 161.0
YYD2_k127_4602472_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000005699 245.0
YYD2_k127_4602472_1 Psort location CytoplasmicMembrane, score 10.00 K12343 - 1.3.1.22 0.000000000000000000000000000000000000000000000000000000000000002443 235.0
YYD2_k127_4602472_2 NAD(P)H-binding K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000004127 205.0
YYD2_k127_4602472_3 protein methyltransferase activity - - - 0.00000000000000000000006871 99.0
YYD2_k127_4608457_0 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 589.0
YYD2_k127_4608457_1 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005994 533.0
YYD2_k127_4608457_10 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000003426 182.0
YYD2_k127_4608457_11 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000002742 176.0
YYD2_k127_4608457_12 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000009488 122.0
YYD2_k127_4608457_13 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000019 125.0
YYD2_k127_4608457_14 Protein containing von Willebrand factor type A (VWA) domain K07161 - - 0.00000000000000000000000002617 126.0
YYD2_k127_4608457_15 PFAM Rieske 2Fe-2S K00363 - 1.7.1.15 0.000000000000000002833 90.0
YYD2_k127_4608457_16 Thioredoxin-like K02199 - - 0.00000000000001455 86.0
YYD2_k127_4608457_17 - - - - 0.000000002535 66.0
YYD2_k127_4608457_19 - - - - 0.0000355 57.0
YYD2_k127_4608457_2 e3 binding domain K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005053 424.0
YYD2_k127_4608457_20 PFAM TPR repeat-containing protein - - - 0.0001069 56.0
YYD2_k127_4608457_3 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005114 326.0
YYD2_k127_4608457_4 PFAM ATPase associated with various cellular activities, AAA_5 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 322.0
YYD2_k127_4608457_5 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K01147 GO:0000175,GO:0000178,GO:0000932,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019439,GO:0022613,GO:0032991,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0035770,GO:0036464,GO:0042254,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1902494,GO:1905354,GO:1990904 3.1.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000005049 291.0
YYD2_k127_4608457_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000001111 233.0
YYD2_k127_4608457_7 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000004408 220.0
YYD2_k127_4608457_8 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03644,K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181,2.8.1.8 0.0000000000000000000000000000000000000000000000000214 207.0
YYD2_k127_4608457_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000003352 195.0
YYD2_k127_460852_0 Natural resistance-associated macrophage protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 479.0
YYD2_k127_460852_1 Aldehyde dehydrogenase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005231 455.0
YYD2_k127_460852_2 MgtE intracellular N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003003 251.0
YYD2_k127_460852_3 metallopeptidase activity - - - 0.000000000000000000000000000000000000000001764 163.0
YYD2_k127_4615192_0 Insulinase (Peptidase family M16) K07263 - - 0.0 1098.0
YYD2_k127_4615192_1 membrane protein, TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 384.0
YYD2_k127_4629449_0 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000303 108.0
YYD2_k127_4629449_1 PFAM Fibronectin type III domain - - - 0.0000647 55.0
YYD2_k127_4646640_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 557.0
YYD2_k127_4646640_1 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 357.0
YYD2_k127_4646640_2 Histidine kinase K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000218 204.0
YYD2_k127_4667860_0 MgsA AAA+ ATPase C terminal K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 495.0
YYD2_k127_4667860_1 TonB dependent receptor K02014 - - 0.0000413 53.0
YYD2_k127_4667860_2 repeat-containing protein - - - 0.0004688 51.0
YYD2_k127_4667860_3 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0009544 52.0
YYD2_k127_4679470_0 UDP-glucoronosyl and UDP-glucosyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005146 308.0
YYD2_k127_4679470_1 Carbon-nitrogen hydrolase K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004994 257.0
YYD2_k127_4690714_0 Heat shock 70 kDa protein K04043 - - 1.007e-235 743.0
YYD2_k127_4690714_1 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 520.0
YYD2_k127_4690714_10 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000006241 210.0
YYD2_k127_4690714_11 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000001557 206.0
YYD2_k127_4690714_12 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000006414 143.0
YYD2_k127_4690714_13 diguanylate cyclase - - - 0.00000000000000000000000000000001319 139.0
YYD2_k127_4690714_14 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.0000000000000000000000000000005855 140.0
YYD2_k127_4690714_15 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000008765 136.0
YYD2_k127_4690714_16 Modulates RecA activity K03565 - - 0.0000000002628 67.0
YYD2_k127_4690714_17 peptidoglycan binding K02453,K03749 GO:0000910,GO:0003674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0022402,GO:0030428,GO:0032153,GO:0032506,GO:0042834,GO:0044464,GO:0051301,GO:0097367 - 0.00009655 52.0
YYD2_k127_4690714_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008302 393.0
YYD2_k127_4690714_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 389.0
YYD2_k127_4690714_4 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 361.0
YYD2_k127_4690714_5 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005212 328.0
YYD2_k127_4690714_6 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 332.0
YYD2_k127_4690714_7 arylsulfatase A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008659 307.0
YYD2_k127_4690714_8 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003486 269.0
YYD2_k127_4690714_9 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001663 267.0
YYD2_k127_4706676_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002737 326.0
YYD2_k127_4706676_1 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004796 309.0
YYD2_k127_4706676_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.17,6.1.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000268 274.0
YYD2_k127_4706676_3 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000003091 241.0
YYD2_k127_4706676_4 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000001883 208.0
YYD2_k127_4706676_5 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000001003 53.0
YYD2_k127_4707305_0 histidine kinase HAMP region domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 508.0
YYD2_k127_4707305_1 Bacterial extracellular solute-binding protein K02048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006074 440.0
YYD2_k127_4707305_2 sulfate ABC transporter K02047 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 364.0
YYD2_k127_4707305_3 COG0555 ABC-type sulfate transport system, permease component K02046 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000609 344.0
YYD2_k127_4707305_4 Two component transcriptional regulator, winged helix family - - - 0.00000000000000000000000001704 127.0
YYD2_k127_4708796_0 serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000002107 227.0
YYD2_k127_4708796_1 Highly conserved protein containing a thioredoxin domain - - - 0.000000000000000000000261 107.0
YYD2_k127_471772_0 PFAM transposase IS116 IS110 IS902 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004844 484.0
YYD2_k127_471772_1 nitrate reductase activity K00370,K00374,K02575 GO:0001666,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006950,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009628,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0036293,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0046906,GO:0048037,GO:0050896,GO:0055114,GO:0070469,GO:0070470,GO:0070482,GO:0071944,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901363,GO:1902494,GO:1990204 1.7.5.1 0.000000000000000000000000000000000000000000000000002643 190.0
YYD2_k127_471772_2 TGS domain K06944 - - 0.0000000000000000000000000000000000000000008362 164.0
YYD2_k127_471772_3 Nitrate reductase delta subunit K00373 - - 0.0000000000004942 73.0
YYD2_k127_471772_4 calcium ion binding K06254,K11835,K17868,K21922 GO:0003674,GO:0005488,GO:0005515 3.1.1.97,3.4.19.12 0.0009424 46.0
YYD2_k127_4724032_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006768 486.0
YYD2_k127_4724032_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 402.0
YYD2_k127_4724032_2 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007565 353.0
YYD2_k127_4724032_3 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 361.0
YYD2_k127_4724032_4 - - - - 0.0000000000000000000000000000000009379 137.0
YYD2_k127_4724032_5 - - - - 0.000267 51.0
YYD2_k127_4766474_0 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.0 1712.0
YYD2_k127_4766474_1 amine dehydrogenase activity K15864 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.2.1,1.7.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007296 302.0
YYD2_k127_482763_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 6.481e-221 707.0
YYD2_k127_482763_1 PFAM AIR synthase related protein domain protein - - - 0.0000000000000000000002743 99.0
YYD2_k127_482763_2 Protein of unknown function (DUF503) K09764 - - 0.0000000000000000245 85.0
YYD2_k127_4830468_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 393.0
YYD2_k127_4830468_1 Endonuclease/Exonuclease/phosphatase family - - - 0.000003635 50.0
YYD2_k127_4832568_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005947 364.0
YYD2_k127_4832568_1 Transmembrane secretion effector K08225 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 341.0
YYD2_k127_4832568_2 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002069 289.0
YYD2_k127_4832568_3 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0008614,GO:0009058,GO:0009108,GO:0009110,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016829,GO:0016840,GO:0016843,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0040007,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0071496,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902494,GO:1903600 4.3.3.6 0.0000598 46.0
YYD2_k127_4862373_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006389 516.0
YYD2_k127_4862373_1 TonB-dependent Receptor Plug Domain K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 436.0
YYD2_k127_4862373_2 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003376 285.0
YYD2_k127_4881366_0 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007191 482.0
YYD2_k127_4881366_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 362.0
YYD2_k127_4881366_2 Metalloenzyme superfamily - - - 0.000000000000000000000000000000000000000000000003486 188.0
YYD2_k127_4881366_3 - - - - 0.000000000000000000000000000000000004888 143.0
YYD2_k127_4881366_5 TIGRFAM PTS system, fructose subfamily, IIC K02768,K02769,K02770 - 2.7.1.202 0.000000000000000008516 89.0
YYD2_k127_4881366_6 toxin-antitoxin pair type II binding - - - 0.0000000007506 65.0
YYD2_k127_4881366_7 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000004574 60.0
YYD2_k127_4902045_0 Belongs to the ATCase OTCase family K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0043857,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003482 291.0
YYD2_k127_4902045_1 Semialdehyde dehydrogenase, NAD binding domain K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000001535 179.0
YYD2_k127_4921270_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 415.0
YYD2_k127_4921270_1 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000002549 209.0
YYD2_k127_4921270_2 oligosaccharyl transferase activity - - - 0.000000000000009671 88.0
YYD2_k127_4924903_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000001318 170.0
YYD2_k127_4924903_1 NYN domain - - - 0.000000000000000000000000000000000000000002251 169.0
YYD2_k127_4924903_2 Calcineurin-like phosphoesterase K03269 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 0.000000000000000000000000000000000000004529 159.0
YYD2_k127_4932341_0 ATP-binding region, ATPase domain protein domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004728 381.0
YYD2_k127_4932341_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.000000000000000000000000000000000000002013 148.0
YYD2_k127_4932341_2 PFAM Uncharacterised protein family UPF0150 - - - 0.0000000000000000000141 94.0
YYD2_k127_4932341_3 Belongs to the UPF0235 family K09131 - - 0.00000000000000002124 85.0
YYD2_k127_4932341_4 Periplasmic or secreted lipoprotein - - - 0.000000002254 57.0
YYD2_k127_4934461_0 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000001057 254.0
YYD2_k127_4934461_1 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000001811 233.0
YYD2_k127_4934461_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000003313 99.0
YYD2_k127_4934461_3 Protein of unknown function, DUF481 K07283 - - 0.0000000008932 69.0
YYD2_k127_4934461_4 Required for chromosome condensation and partitioning K03529 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.000008155 58.0
YYD2_k127_4934461_5 Domain of unknown function (DUF4870) - - - 0.00007977 49.0
YYD2_k127_4939318_0 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004394 409.0
YYD2_k127_4939318_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003932 400.0
YYD2_k127_4939318_2 ABC-type transport system involved in multi-copper enzyme maturation permease component K01992 - - 0.000000000000000000000000000000000000000000000004111 187.0
YYD2_k127_4939318_3 - - - - 0.0000000000000000000000000000000000001665 160.0
YYD2_k127_4939318_4 - - - - 0.0000000000000000000000000529 117.0
YYD2_k127_4939318_5 iron ion homeostasis - - - 0.000000000000000000001281 104.0
YYD2_k127_4954856_0 CorA-like Mg2+ transporter protein K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 314.0
YYD2_k127_4954856_1 arylsulfatase A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 324.0
YYD2_k127_4954856_2 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000004378 168.0
YYD2_k127_4954856_3 palmitoyl-(protein) hydrolase activity K06999 - - 0.0000000000000000000000000000000000001527 158.0
YYD2_k127_4954856_4 Subtilase family - - - 0.00000000000000000000000004029 126.0
YYD2_k127_4954856_5 belongs to the thioredoxin family K03671,K05838 - - 0.000000000000008201 89.0
YYD2_k127_4954856_6 TonB dependent receptor K16089 - - 0.0000000000001022 85.0
YYD2_k127_4954856_7 Cellulose 1,4-beta-cellobiosidase - - - 0.00000001418 68.0
YYD2_k127_4954856_8 periplasmic protein thiol disulfide oxidoreductases, DsbE subfamily K02199 - - 0.0000008047 63.0
YYD2_k127_4956723_0 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 - 2.7.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 559.0
YYD2_k127_4956723_1 NADH-quinone oxidoreductase chain L K00341,K05577 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 520.0
YYD2_k127_4956723_10 transmembrane transport K01992,K09696 - - 0.000000000000000000000000000000000000000000000000000000000007825 222.0
YYD2_k127_4956723_11 - - - - 0.0000000000000000000000000000000000000000000000001979 192.0
YYD2_k127_4956723_12 Belongs to the acetyltransferase family. ArgA subfamily - - - 0.000000000000000000000000000000000000000000001026 171.0
YYD2_k127_4956723_13 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000003636 122.0
YYD2_k127_4956723_14 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000004627 106.0
YYD2_k127_4956723_15 Converts isocitrate to alpha ketoglutarate K00031 - 1.1.1.42 0.00000000000000000000000551 118.0
YYD2_k127_4956723_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00332 - 1.6.5.3 0.00000000000000000000001374 107.0
YYD2_k127_4956723_17 4Fe-4S dicluster domain K00338,K02573,K03941 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3,1.6.99.3 0.0000000000000000000002213 112.0
YYD2_k127_4956723_18 Belongs to the complex I subunit 6 family K05578 - 1.6.5.3 0.00000000000008844 82.0
YYD2_k127_4956723_19 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0000000000002743 79.0
YYD2_k127_4956723_2 Proton-conducting membrane transporter K00342,K05575 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 538.0
YYD2_k127_4956723_20 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000004862 79.0
YYD2_k127_4956723_21 snoRNA binding - - - 0.00000005836 66.0
YYD2_k127_4956723_3 NAD binding K00333,K05579,K13378 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 407.0
YYD2_k127_4956723_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343,K05573 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004243 370.0
YYD2_k127_4956723_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337,K05572 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0044237,GO:0045333,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 309.0
YYD2_k127_4956723_6 ATPase activity K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002098 275.0
YYD2_k127_4956723_7 Uncharacterized conserved protein (COG2071) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003242 261.0
YYD2_k127_4956723_8 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000005745 273.0
YYD2_k127_4956723_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000007014 228.0
YYD2_k127_5011110_0 Carbon-nitrogen hydrolase K03820 - - 0.00000000000000000000000000000000003533 155.0
YYD2_k127_5011110_1 DNA-templated transcription, initiation - - - 0.0000000000000000000000000002108 130.0
YYD2_k127_5011110_2 negative regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment - - - 0.0000000000000000001025 102.0
YYD2_k127_5011110_4 repeat-containing protein - - - 0.00001674 58.0
YYD2_k127_5019349_0 peptidyl-lysine modification to peptidyl-hypusine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 340.0
YYD2_k127_5019349_1 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000000000000000002174 224.0
YYD2_k127_5019349_2 Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000001241 132.0
YYD2_k127_5019349_3 Transmembrane and tetratricopeptide repeat containing 4 - - - 0.0000000000002119 84.0
YYD2_k127_5019349_4 transposition, DNA-mediated K02342 - 2.7.7.7 0.0000004478 61.0
YYD2_k127_5027106_0 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 492.0
YYD2_k127_5027106_1 COGs COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000002334 128.0
YYD2_k127_5033740_0 Catalyzes the conversion of dihydroorotate to orotate with NAD( ) as electron acceptor K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 387.0
YYD2_k127_5033740_1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 363.0
YYD2_k127_5033740_2 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.000000000000000000000000000000000000000000000000000000000000000000000000669 267.0
YYD2_k127_5033740_3 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000003546 229.0
YYD2_k127_5033740_4 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000001153 222.0
YYD2_k127_5033740_5 Oxidoreductase NAD-binding domain K02823 - - 0.00000000000000000000000000000000000000000107 174.0
YYD2_k127_5047371_0 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 0.0 1104.0
YYD2_k127_5047371_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006819 448.0
YYD2_k127_5047371_2 Prokaryotic glutathione synthetase, ATP-grasp domain K05844 - - 0.00000000000000000003083 108.0
YYD2_k127_5084848_0 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009896 514.0
YYD2_k127_5084848_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 452.0
YYD2_k127_5084848_10 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000002617 258.0
YYD2_k127_5084848_11 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000004684 245.0
YYD2_k127_5084848_12 rRNA methylase K06442 - 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000000000000000000002106 229.0
YYD2_k127_5084848_13 PFAM Aminotransferase class I and II K00812,K10907 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000008458 231.0
YYD2_k127_5084848_14 Methyltransferase type 11 K00570 - 2.1.1.17,2.1.1.71 0.000000000000000000000000000000000000000000001456 176.0
YYD2_k127_5084848_15 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0000000000000000000000000000000000000001886 152.0
YYD2_k127_5084848_16 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.000000000000000000000000000000000000001259 153.0
YYD2_k127_5084848_17 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000199 165.0
YYD2_k127_5084848_18 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000009735 136.0
YYD2_k127_5084848_19 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000000000000003022 94.0
YYD2_k127_5084848_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008293 381.0
YYD2_k127_5084848_20 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000006317 70.0
YYD2_k127_5084848_22 PBS lyase HEAT domain protein repeat-containing protein K22221 - - 0.0001261 53.0
YYD2_k127_5084848_3 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003504 382.0
YYD2_k127_5084848_4 Endoribonuclease that initiates mRNA decay K18682 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004939 386.0
YYD2_k127_5084848_5 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007967 376.0
YYD2_k127_5084848_6 Amino acid kinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 314.0
YYD2_k127_5084848_7 Tetrahydrodipicolinate N-succinyltransferase N-terminal K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005275 300.0
YYD2_k127_5084848_8 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002023 294.0
YYD2_k127_5084848_9 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000001797 275.0
YYD2_k127_5095355_0 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 426.0
YYD2_k127_5095355_1 methyltransferase activity K21310 - 2.1.1.334 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001113 282.0
YYD2_k127_5095355_2 Belongs to the aspartate glutamate racemases family K01779 - 5.1.1.13 0.000000000000000000000000000000000000000000000000000193 187.0
YYD2_k127_5109723_0 Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate K01782,K01825 GO:0003674,GO:0003824,GO:0003857,GO:0004165,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0008692,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0016856,GO:0016860,GO:0016863,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8 7.697e-259 829.0
YYD2_k127_5109723_1 Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed K00632 GO:0003674,GO:0003824,GO:0003988,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016408,GO:0016740,GO:0016746,GO:0016747,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006001 546.0
YYD2_k127_5109723_2 Belongs to the RtcB family K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006538 510.0
YYD2_k127_5109723_3 AAA domain - - - 0.0000000000000000000000000003834 124.0
YYD2_k127_5109723_4 Hemerythrin-like metal-binding protein K07216 - - 0.000000000000000009947 88.0
YYD2_k127_5109723_5 Tetratricopeptide repeat - - - 0.000000011 66.0
YYD2_k127_5122136_0 Endoribonuclease that initiates mRNA decay K18682 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003029 445.0
YYD2_k127_5122136_1 Squalene/phytoene synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006362 260.0
YYD2_k127_5122136_2 TIGRFAM squalene-associated FAD-dependent desaturase - - - 0.00000000000000000000000000000000000000000000000000201 207.0
YYD2_k127_5122136_3 Squalene phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000009669 178.0
YYD2_k127_5122136_4 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000004857 146.0
YYD2_k127_5122136_5 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.00000000000000000000005251 100.0
YYD2_k127_5122136_6 - - - - 0.0000000000000002771 90.0
YYD2_k127_5124338_0 secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003582 270.0
YYD2_k127_5124338_1 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003205 270.0
YYD2_k127_5124338_2 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000004365 244.0
YYD2_k127_5124338_3 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02769,K02770 - 2.7.1.202 0.0000000000001616 72.0
YYD2_k127_5124338_4 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000001466 76.0
YYD2_k127_5126754_0 - K12065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005181 368.0
YYD2_k127_5126754_1 Transporter associated domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 364.0
YYD2_k127_5126754_2 belongs to the Fur family K03711,K09823,K09825 - - 0.00000000000000000000000000000000001101 140.0
YYD2_k127_5126754_3 Protein of unknown function (DUF1573) - - - 0.00000000002568 74.0
YYD2_k127_5126754_4 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000002803 70.0
YYD2_k127_5126754_5 Cytochrome C oxidase, cbb3-type, subunit III K00406,K03889 - - 0.000000085 63.0
YYD2_k127_5126754_6 - - - - 0.000002243 57.0
YYD2_k127_5127312_0 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000002513 240.0
YYD2_k127_5127312_1 TIGRFAM VWFA-related Acidobacterial domain - - - 0.00000000000003305 87.0
YYD2_k127_5127312_2 Tetratricopeptide repeats - - - 0.000003525 59.0
YYD2_k127_5127312_3 Carboxypeptidase regulatory-like domain - - - 0.000008704 58.0
YYD2_k127_5129846_0 Acetyl-CoA hydrolase/transferase N-terminal domain K01067 - 3.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000752 542.0
YYD2_k127_5129846_1 Pyruvate ferredoxin/flavodoxin oxidoreductase K00187 - 1.2.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 435.0
YYD2_k127_5129846_2 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001399 290.0
YYD2_k127_5139922_0 Aldehyde dehydrogenase family K10217 - 1.2.1.32,1.2.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 376.0
YYD2_k127_5139922_1 short-chain dehydrogenase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000717 300.0
YYD2_k127_5139922_2 Zn peptidase - - - 0.0000000001243 70.0
YYD2_k127_5142353_0 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002357 254.0
YYD2_k127_5142353_1 - - - - 0.000000000000000000000000000343 119.0
YYD2_k127_5142353_2 nuclease (RecB family) - - - 0.000000000000000000003412 108.0
YYD2_k127_5142353_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000006193 99.0
YYD2_k127_5142353_4 Domain of unknown function (DUF4252) - - - 0.000000009318 67.0
YYD2_k127_5142353_5 Putative zinc-finger - - - 0.0007079 51.0
YYD2_k127_51444_0 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 369.0
YYD2_k127_51444_1 C-terminal domain of CHU protein family - - - 0.000000000000002899 90.0
YYD2_k127_51444_2 Thrombospondin C-terminal region K04659 - - 0.00002739 57.0
YYD2_k127_5157494_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 567.0
YYD2_k127_5157494_1 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 404.0
YYD2_k127_5157494_2 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity K00819,K00821 GO:0003674,GO:0003824,GO:0004587,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016740,GO:0016769,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.6.1.11,2.6.1.13,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000255 282.0
YYD2_k127_5168514_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000001146 56.0
YYD2_k127_5168514_1 Protein of unknown function (DUF2167) - - - 0.0001746 48.0
YYD2_k127_5177106_0 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000009627 273.0
YYD2_k127_5177106_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000907 260.0
YYD2_k127_5177106_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.00000000000000005496 89.0
YYD2_k127_5177106_3 ATP hydrolysis coupled proton transport K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0001172 44.0
YYD2_k127_5188519_0 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001517 239.0
YYD2_k127_5188519_1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000002438 216.0
YYD2_k127_5188519_2 Domain of unknown function (DUF4010) - - - 0.00000000000000000000000000000000000000000000000000000003153 211.0
YYD2_k127_5188519_3 Acyl-transferase K00655 - 2.3.1.51 0.0000000269 67.0
YYD2_k127_5198102_0 Alpha-2-Macroglobulin K06894 - - 8.571e-234 790.0
YYD2_k127_5198102_1 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 437.0
YYD2_k127_5198102_2 Transglycosylase K05367 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009841 464.0
YYD2_k127_5198102_3 FAD dependent oxidoreductase K00273 - 1.4.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 310.0
YYD2_k127_5198102_4 domain protein - - - 0.000000008282 57.0
YYD2_k127_5200441_0 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 604.0
YYD2_k127_5200441_1 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000008039 158.0
YYD2_k127_5200441_2 HI0933-like protein K07007 - - 0.0000000000002624 69.0
YYD2_k127_5202226_0 Subtilase family K17734 - - 0.0000000000000000000000000000000000000000000000000000000000005856 239.0
YYD2_k127_5202226_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000527 190.0
YYD2_k127_5202226_2 YMGG-like Gly-zipper - - - 0.00000000000000000000000000000000000000004528 158.0
YYD2_k127_5202226_4 - - - - 0.000000003559 68.0
YYD2_k127_5249757_0 LD-carboxypeptidase K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000001464 201.0
YYD2_k127_5249757_1 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000002785 78.0
YYD2_k127_5249757_3 - - - - 0.00007814 47.0
YYD2_k127_5255682_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 396.0
YYD2_k127_5255682_1 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000905 128.0
YYD2_k127_5255682_2 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.00000000000003852 86.0
YYD2_k127_5262821_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007787 578.0
YYD2_k127_5262821_1 UDP binding domain K02474,K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 545.0
YYD2_k127_5262821_10 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000004851 190.0
YYD2_k127_5262821_11 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.00000000000000000000000000000000000000000001674 188.0
YYD2_k127_5262821_12 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.00000000000000000000000000000000000000001116 166.0
YYD2_k127_5262821_13 asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000001213 165.0
YYD2_k127_5262821_15 PFAM polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000003435 151.0
YYD2_k127_5262821_16 Glycosyl transferases group 1 K13668 - 2.4.1.346 0.00000000000000000000000000000000501 147.0
YYD2_k127_5262821_17 Nucleotidyl transferase K00971 - 2.7.7.13 0.0000000000000000000000000000000756 136.0
YYD2_k127_5262821_18 Glycosyl transferases group 1 - - - 0.0000000000000002571 93.0
YYD2_k127_5262821_19 belongs to the aldehyde dehydrogenase family K09472,K12254 - 1.2.1.54,1.2.1.99 0.0000002548 63.0
YYD2_k127_5262821_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 542.0
YYD2_k127_5262821_20 MlaD protein K02067 - - 0.000002095 59.0
YYD2_k127_5262821_3 PFAM NAD-dependent epimerase dehydratase K01784,K02473 - 5.1.3.2,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 371.0
YYD2_k127_5262821_4 Male sterility protein K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 355.0
YYD2_k127_5262821_5 Catalyzes the phosphorylation of D-glycero-D-manno- heptose 7-phosphate at the C-1 position to selectively form D- glycero-beta-D-manno-heptose-1,7-bisphosphate K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 322.0
YYD2_k127_5262821_6 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007508 313.0
YYD2_k127_5262821_7 PFAM ABC transporter related K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001342 264.0
YYD2_k127_5262821_8 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000001934 235.0
YYD2_k127_5262821_9 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000001565 187.0
YYD2_k127_527225_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 2.323e-286 895.0
YYD2_k127_527225_1 PFAM carboxyl transferase K01615 - 4.1.1.70 2.483e-236 784.0
YYD2_k127_527225_2 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 521.0
YYD2_k127_527225_3 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 502.0
YYD2_k127_527225_4 Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 425.0
YYD2_k127_527225_5 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000393 251.0
YYD2_k127_527225_6 ligase activity, forming carbon-carbon bonds K00627,K00645,K01572,K02160 - 2.3.1.12,2.3.1.39,4.1.1.3 0.0000000000000000004365 103.0
YYD2_k127_5291819_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 2.064e-227 726.0
YYD2_k127_5291819_1 EXOIII K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000739 250.0
YYD2_k127_5291819_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000007524 161.0
YYD2_k127_5312670_0 nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 356.0
YYD2_k127_5312670_1 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032991,GO:0032993,GO:0033554,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000097 257.0
YYD2_k127_5312670_2 Rad51 - - - 0.00001565 57.0
YYD2_k127_531289_0 Glutamine synthetase type III K01915 - 6.3.1.2 3.026e-300 936.0
YYD2_k127_531289_1 Highly conserved protein containing a thioredoxin domain - - - 0.000000000000000000000003038 112.0
YYD2_k127_5314862_0 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 469.0
YYD2_k127_5314862_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008717 320.0
YYD2_k127_5314862_2 Deoxynucleoside kinase K15518 - 2.7.1.113 0.00000000000000000000000000000000000000000000000000000000000002017 237.0
YYD2_k127_5314862_3 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.00000000000000000000000000000002022 138.0
YYD2_k127_5314862_4 PFAM Tetratricopeptide repeat - - - 0.00004159 53.0
YYD2_k127_5347484_0 nitrate reductase beta subunit K00371,K17051 - 1.7.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009499 540.0
YYD2_k127_5347484_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370,K07306,K17050 - 1.7.5.1,1.8.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003834 331.0
YYD2_k127_5347484_2 Cyclic nucleotide-monophosphate binding domain K10914 - - 0.00000000000000000000000000000000000000000813 161.0
YYD2_k127_5347484_3 Cytochrome c K00373,K00405,K17052 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016530,GO:0022607,GO:0034622,GO:0042126,GO:0042128,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0051131,GO:0065003,GO:0071704,GO:0071840,GO:0071941,GO:0140104,GO:2001057 - 0.0000000000001339 81.0
YYD2_k127_5347484_4 Plasmid stabilization system - - - 0.00000000001009 71.0
YYD2_k127_5347484_6 chaperone-mediated protein complex assembly - - - 0.00000001307 67.0
YYD2_k127_5380351_0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.000000000000000000000000000000000000000000000000000000000001964 225.0
YYD2_k127_5380351_1 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000000001062 186.0
YYD2_k127_5380351_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000007254 157.0
YYD2_k127_5380351_3 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000002569 154.0
YYD2_k127_5380351_4 - - - - 0.000000000000000000000001604 108.0
YYD2_k127_53970_0 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 5.667e-216 694.0
YYD2_k127_53970_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000008395 243.0
YYD2_k127_53970_2 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000003232 199.0
YYD2_k127_53970_3 SMART protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000001298 191.0
YYD2_k127_53970_4 Phage regulatory protein - - - 0.00000000000000000000000000000000000009932 152.0
YYD2_k127_53970_5 - - - - 0.0000000000000000000000008668 115.0
YYD2_k127_53970_6 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.00000000000000000000000694 102.0
YYD2_k127_53970_7 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000008334 55.0
YYD2_k127_5403945_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 1.348e-236 738.0
YYD2_k127_5411064_0 Glycogen debranching enzyme - - - 0.0 1457.0
YYD2_k127_5411064_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 5.576e-264 867.0
YYD2_k127_5411064_2 Pfam:UPF0118 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002404 252.0
YYD2_k127_5411064_3 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000001996 191.0
YYD2_k127_5411064_4 AsmA family K07289,K07290 - - 0.000000000000000000303 103.0
YYD2_k127_541336_0 BAAT / Acyl-CoA thioester hydrolase C terminal K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 411.0
YYD2_k127_541336_1 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000005672 126.0
YYD2_k127_541336_2 Protein of unknown function (DUF3500) - - - 0.0000000000000000008188 86.0
YYD2_k127_541336_3 - - - - 0.00000000001212 76.0
YYD2_k127_541336_4 BAAT / Acyl-CoA thioester hydrolase C terminal K01061 - 3.1.1.45 0.000000002155 69.0
YYD2_k127_5421918_0 NAD dependent epimerase/dehydratase family K05281 - 1.3.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 401.0
YYD2_k127_5421918_1 ATP ADP translocase K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003646 331.0
YYD2_k127_5421918_10 - - - - 0.0000001598 59.0
YYD2_k127_5421918_12 Tetratricopeptide repeat - - - 0.0000007177 62.0
YYD2_k127_5421918_13 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0003703 43.0
YYD2_k127_5421918_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005967 321.0
YYD2_k127_5421918_3 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009925 318.0
YYD2_k127_5421918_4 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000004654 200.0
YYD2_k127_5421918_5 methyltransferase activity - - - 0.00000000000000000000000000000000000001523 151.0
YYD2_k127_5421918_6 Protein-S-isoprenylcysteine methyltransferase - - - 0.00000000000000000000000000000001177 140.0
YYD2_k127_5421918_7 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000201 131.0
YYD2_k127_5421918_8 - - - - 0.00000000000000000000000000000483 123.0
YYD2_k127_5424664_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004235 275.0
YYD2_k127_5424664_1 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000007918 107.0
YYD2_k127_5427527_0 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 492.0
YYD2_k127_5427527_1 TIGRFAM phenazine biosynthesis protein PhzF family K06998 - 5.3.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 345.0
YYD2_k127_5427527_2 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 346.0
YYD2_k127_5427527_3 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002027 268.0
YYD2_k127_5427527_4 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002177 258.0
YYD2_k127_5427527_5 protocatechuate 3,4-dioxygenase activity K00449 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000000000000004983 227.0
YYD2_k127_5427527_6 Cupin domain - - - 0.00000000000000000000000000000000000000000002749 168.0
YYD2_k127_5427527_7 Polysaccharide deacetylase - - - 0.00000000000000000000000000003316 123.0
YYD2_k127_5427585_0 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005222 311.0
YYD2_k127_5427585_1 overlaps another CDS with the same product name - - - 0.00000000000000000000000000000000000000000000000003224 194.0
YYD2_k127_5427585_2 Glycosyltransferase like family 2 - - - 0.000000000000000000000003017 120.0
YYD2_k127_5427585_3 Pfam:DUF2029 - - - 0.000000000000000000001246 111.0
YYD2_k127_5427585_4 glycosyl hydrolase, family 3 K05349 - 3.2.1.21 0.000004213 55.0
YYD2_k127_5432976_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 531.0
YYD2_k127_5432976_1 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006743 349.0
YYD2_k127_5432976_2 Fumarylacetoacetate (FAA) hydrolase family K16165 - 3.7.1.20 0.0000000000000000000000000000000000000000000000000000000001841 216.0
YYD2_k127_5448143_0 Mo-molybdopterin cofactor biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008423 286.0
YYD2_k127_5448143_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000003485 226.0
YYD2_k127_5448143_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.0002202 54.0
YYD2_k127_5452175_0 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005887 485.0
YYD2_k127_5452175_1 Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily K03615 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 368.0
YYD2_k127_5452175_2 Part of a membrane complex involved in electron transport K03614 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001519 297.0
YYD2_k127_5452175_3 Part of a membrane complex involved in electron transport K03617 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000671 271.0
YYD2_k127_5452175_4 Part of a membrane complex involved in electron transport K03613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005933 245.0
YYD2_k127_5452175_5 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000005474 204.0
YYD2_k127_5452175_6 Part of a membrane complex involved in electron transport - - - 0.000000000000000000000000000000000000000002787 163.0
YYD2_k127_5462467_0 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006295 510.0
YYD2_k127_548874_0 DNA topoisomerase type I activity K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 307.0
YYD2_k127_548874_1 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003419 272.0
YYD2_k127_5519084_0 Smr domain - - - 0.00000000000000000000000000005827 119.0
YYD2_k127_5519084_1 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) K07259 - 3.4.16.4 0.0000000000000000000000000001702 132.0
YYD2_k127_5519084_2 MatE K03327 - - 0.0000000000000000000000000005889 121.0
YYD2_k127_5519084_4 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000007575 84.0
YYD2_k127_5519084_5 - - - - 0.00000006728 58.0
YYD2_k127_5521250_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 4.018e-196 619.0
YYD2_k127_5521250_1 Dehydrogenase E1 component K00164 - 1.2.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009429 437.0
YYD2_k127_5521250_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352 432.0
YYD2_k127_5523587_0 nickel-dependent hydrogenase, large subunit K06281 - 1.12.99.6 3.209e-281 873.0
YYD2_k127_5523587_1 Belongs to the carbamoyltransferase HypF family K04656 - - 4.211e-242 771.0
YYD2_k127_5523587_10 COG0451 Nucleoside-diphosphate-sugar epimerases - - - 0.000000000000000000000000000000000000001253 166.0
YYD2_k127_5523587_11 PFAM peptidase M52 hydrogen uptake protein K03605 - - 0.00000000000000000000000000000000000008672 157.0
YYD2_k127_5523587_12 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000002565 133.0
YYD2_k127_5523587_13 HupF/HypC family K04653 - - 0.000000000000000001781 99.0
YYD2_k127_5523587_14 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.00000000000000006197 85.0
YYD2_k127_5523587_2 TIGRFAM hydrogenase expression formation protein HypD K04654 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 514.0
YYD2_k127_5523587_3 TIGRFAM hydrogenase (NiFe) small subunit (hydA) K06282,K18008 - 1.12.2.1,1.12.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003957 495.0
YYD2_k127_5523587_4 hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 417.0
YYD2_k127_5523587_5 PFAM Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006266 381.0
YYD2_k127_5523587_6 TIGRFAM Hydrogenase accessory protein HypB K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 339.0
YYD2_k127_5523587_7 4 iron, 4 sulfur cluster binding K00124 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0005975,GO:0006066,GO:0006071,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016052,GO:0019400,GO:0019405,GO:0019563,GO:0019588,GO:0019662,GO:0019751,GO:0031224,GO:0031226,GO:0042597,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0044425,GO:0044459,GO:0044464,GO:0046164,GO:0046174,GO:0055114,GO:0071704,GO:0071944,GO:1901575,GO:1901615,GO:1901616 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 322.0
YYD2_k127_5523587_8 PFAM MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 321.0
YYD2_k127_5523587_9 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.000000000000000000000000000000000000000000000001117 183.0
YYD2_k127_5531734_0 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 343.0
YYD2_k127_5531734_1 glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000008075 162.0
YYD2_k127_5531734_2 TatD family K03424 - - 0.000000000000000000000000000000003168 138.0
YYD2_k127_5531734_3 COG0457 FOG TPR repeat - - - 0.0000000001596 70.0
YYD2_k127_559097_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 327.0
YYD2_k127_559097_1 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000004634 254.0
YYD2_k127_559097_2 Glycosyltransferase family 28 N-terminal domain K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000001187 189.0
YYD2_k127_5593419_0 Aminotransferase class-V K04127 - 5.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 437.0
YYD2_k127_5593419_1 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004758 349.0
YYD2_k127_5593419_2 O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000002271 228.0
YYD2_k127_5593419_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07263 - - 0.0000000000000000000000000000000000000000000000000009764 210.0
YYD2_k127_5593419_4 PFAM Class I peptide chain release factor K15034 - - 0.0000000000000000000000008177 123.0
YYD2_k127_5593419_5 Domain of unknown function (DUF4442) - - - 0.0000005898 53.0
YYD2_k127_5648562_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000001118 202.0
YYD2_k127_5648562_1 Lamin Tail Domain - - - 0.00000000000000000000000000000000001713 156.0
YYD2_k127_5660964_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 364.0
YYD2_k127_5660964_1 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000001059 213.0
YYD2_k127_5660964_2 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000006895 214.0
YYD2_k127_5660964_3 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.00000000000000000000000000000000000000000004697 169.0
YYD2_k127_5660964_4 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000006265 115.0
YYD2_k127_5660964_5 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.00000002744 66.0
YYD2_k127_5661803_0 Domains in Na-Ca exchangers and integrin-beta4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 453.0
YYD2_k127_566227_0 polyphosphate kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 491.0
YYD2_k127_566227_1 Tricorn protease C1 domain K08676 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 512.0
YYD2_k127_566227_2 Transcription factor zinc-finger K09981 - - 0.000000000000000000000000000000000000000008055 179.0
YYD2_k127_5665783_0 Prolyl oligopeptidase family - - - 1.254e-295 921.0
YYD2_k127_5665783_1 peptidase S9 - - - 2.627e-265 832.0
YYD2_k127_5665783_10 PFAM Nickel transport complex, NikM subunit, transmembrane - - - 0.00000000000000000000000000000000009371 153.0
YYD2_k127_5665783_11 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000006021 118.0
YYD2_k127_5665783_12 repeat-containing protein - - - 0.0000000000000001539 90.0
YYD2_k127_5665783_2 Mismatch repair ATPase (MutS family) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 519.0
YYD2_k127_5665783_3 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 487.0
YYD2_k127_5665783_4 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 437.0
YYD2_k127_5665783_5 Domain of unknown function (DUF4301) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002693 434.0
YYD2_k127_5665783_6 Predicted membrane protein (DUF2238) K08984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 310.0
YYD2_k127_5665783_7 Zinc-binding dehydrogenase K07538 - 1.1.1.368 0.00000000000000000000000000000000000000000000000000000000000000000000000003773 255.0
YYD2_k127_5665783_8 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000004821 198.0
YYD2_k127_5665783_9 Domain of unknown function (DUF4010) - - - 0.00000000000000000000000000000000000000000000000000001338 207.0
YYD2_k127_5677378_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009151 494.0
YYD2_k127_5677378_1 SAICAR synthetase K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 370.0
YYD2_k127_5677378_2 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 329.0
YYD2_k127_5677378_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002456 273.0
YYD2_k127_5677378_4 Peptidase, M23 - - - 0.00000000000000000000000000000000000000000004789 173.0
YYD2_k127_5677378_5 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - - - 0.000000000000000000000000289 117.0
YYD2_k127_5677378_6 COG0457 FOG TPR repeat - - - 0.000000000000000003486 97.0
YYD2_k127_567894_0 PFAM peptidase M13 K01415 - 3.4.24.71 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 621.0
YYD2_k127_567894_1 Nitronate monooxygenase K00459,K02371 - 1.13.12.16,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 420.0
YYD2_k127_567894_2 Belongs to the radical SAM superfamily. RlmN family K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000002173 265.0
YYD2_k127_567894_3 DoxX K15977 - - 0.00000000000000000000000000000000000000000003169 171.0
YYD2_k127_567894_4 MarR family transcriptional K15973 - - 0.00000000000000000000000000000000000008023 154.0
YYD2_k127_567894_5 Polysaccharide biosynthesis C-terminal domain - - - 0.000000000000000000007816 109.0
YYD2_k127_567894_6 membrane protein domain - - - 0.00000000000005262 82.0
YYD2_k127_567894_8 Domain of unknown function (DUF4442) - - - 0.000000000001993 68.0
YYD2_k127_5683787_0 Belongs to the UPF0173 family - - - 0.000000000000000000000000000000000000000000000000000000000000478 214.0
YYD2_k127_5683787_1 mechanosensitive ion channel - - - 0.00000000003292 73.0
YYD2_k127_5683787_2 metallopeptidase activity - - - 0.00000665 59.0
YYD2_k127_570393_0 Belongs to the aldehyde dehydrogenase family K00128,K00130,K10217 - 1.2.1.3,1.2.1.32,1.2.1.8,1.2.1.85 3.663e-197 632.0
YYD2_k127_570393_1 Aminotransferase class-V K01556 - 3.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 497.0
YYD2_k127_570393_10 Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation K07130 GO:0003674,GO:0003824,GO:0004061,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043167,GO:0043169,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.000000000000000000000000000000000000000000000000001225 209.0
YYD2_k127_570393_11 Endoribonuclease L-PSP K15067 - 3.5.99.5 0.0000000000000000000000000000000000000000000804 168.0
YYD2_k127_570393_12 Zn peptidase - - - 0.000000000000000000000000000000000000007566 168.0
YYD2_k127_570393_13 PFAM CoA-binding domain protein K06929 - - 0.0000000000000000000000000000000000001164 147.0
YYD2_k127_570393_14 Phosphoglycerate mutase family K08296 - - 0.000000000000000000000000003031 117.0
YYD2_k127_570393_15 Tim44 - - - 0.0000000000000000003434 102.0
YYD2_k127_570393_16 Membrane K08988 - - 0.000000000000000002862 93.0
YYD2_k127_570393_17 Thioredoxin - - - 0.0000001239 57.0
YYD2_k127_570393_2 Amidohydrolase K03392 - 4.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 465.0
YYD2_k127_570393_3 FAD binding domain K00486 - 1.14.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 423.0
YYD2_k127_570393_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 411.0
YYD2_k127_570393_5 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 324.0
YYD2_k127_570393_6 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 296.0
YYD2_k127_570393_7 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000125 284.0
YYD2_k127_570393_8 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.00000000000000000000000000000000000000000000000000000000000000000001916 237.0
YYD2_k127_570393_9 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000931 207.0
YYD2_k127_5707214_0 Peptidase S46 - - - 1.018e-224 715.0
YYD2_k127_5707214_1 Sulfate permease family K03321 - - 4.693e-212 672.0
YYD2_k127_5707214_10 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000006522 235.0
YYD2_k127_5707214_11 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000005043 216.0
YYD2_k127_5707214_12 NUDIX domain K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000006116 190.0
YYD2_k127_5707214_13 cellular response to DNA damage stimulus K07340 - - 0.00000000000000000000000000000000000002346 147.0
YYD2_k127_5707214_14 hydrolase of the alpha beta superfamily K07018 - - 0.000000000000000000000000000000000004376 146.0
YYD2_k127_5707214_15 Ferredoxin - - - 0.0000000000000000000000000000000006401 146.0
YYD2_k127_5707214_16 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000000001191 137.0
YYD2_k127_5707214_17 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0031224,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.000000000000000000000000000002789 139.0
YYD2_k127_5707214_19 - - - - 0.000000000000000000000000001204 132.0
YYD2_k127_5707214_2 Acyclic terpene utilisation family protein AtuA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005861 597.0
YYD2_k127_5707214_20 Transcriptional regulator - - - 0.00000000000000000000000002047 118.0
YYD2_k127_5707214_21 COG0568 DNA-directed RNA polymerase, sigma subunit K03087 GO:0000988,GO:0000990,GO:0001000,GO:0001121,GO:0001123,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043175,GO:0043254,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.000000000000000000000003188 111.0
YYD2_k127_5707214_22 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.0000000000000000000007352 113.0
YYD2_k127_5707214_23 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 0.00000000000000001897 86.0
YYD2_k127_5707214_3 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 456.0
YYD2_k127_5707214_4 Ribonuclease E/G family K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003594 449.0
YYD2_k127_5707214_5 Family of unknown function (DUF1028) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005282 338.0
YYD2_k127_5707214_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 344.0
YYD2_k127_5707214_7 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 293.0
YYD2_k127_5707214_8 NUDIX domain K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001505 271.0
YYD2_k127_5707214_9 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000001554 251.0
YYD2_k127_5707655_0 Glucose inhibited division protein A K00313 - - 1.83e-216 678.0
YYD2_k127_5707655_1 Dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006572 586.0
YYD2_k127_5707655_2 Electron transfer flavoprotein domain K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003229 480.0
YYD2_k127_5707655_3 Electron transfer flavoprotein domain K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 404.0
YYD2_k127_5707655_4 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K03855 - - 0.000000000000000000000000000000000000000000000004968 176.0
YYD2_k127_5715127_0 Histidine ammonia-lyase K01745 - 4.3.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 538.0
YYD2_k127_5715127_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 413.0
YYD2_k127_5715127_2 Diguanylate cyclase - - - 0.0000000000000000000000000000009865 137.0
YYD2_k127_5715127_3 cheY-homologous receiver domain - - - 0.000000000000000000008128 100.0
YYD2_k127_5725066_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03696 - - 5.113e-206 695.0
YYD2_k127_5725066_1 PFAM peptidase M3A and M3B thimet oligopeptidase F K08602 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000975 608.0
YYD2_k127_5725066_10 Tetratricopeptide repeat - - - 0.0000000000006338 82.0
YYD2_k127_5725066_11 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000005974 62.0
YYD2_k127_5725066_12 Periplasmic component of the Tol biopolymer transport system - - - 0.0000000006398 73.0
YYD2_k127_5725066_13 Belongs to the ompA family K03286 - - 0.00001538 55.0
YYD2_k127_5725066_14 Periplasmic component of the Tol biopolymer transport system - - - 0.0001181 56.0
YYD2_k127_5725066_2 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 551.0
YYD2_k127_5725066_3 Sugar (and other) transporter K08151 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 501.0
YYD2_k127_5725066_4 Domain of Unknown Function (DUF748) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 464.0
YYD2_k127_5725066_5 PFAM Cys Met metabolism K01760,K01761 - 4.4.1.11,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004475 432.0
YYD2_k127_5725066_6 Tetratricopeptide repeat K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000002637 255.0
YYD2_k127_5725066_7 Peptidase family M28 - - - 0.00000000000000000000000000000002418 145.0
YYD2_k127_5725066_8 - - - - 0.00000000000000000000000000003764 135.0
YYD2_k127_5725066_9 CoA binding domain K06929 - - 0.0000000000000003291 95.0
YYD2_k127_5727153_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 334.0
YYD2_k127_5727153_1 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000009948 184.0
YYD2_k127_5727153_2 PFAM EAL domain - - - 0.00000000000000000000000000000000007032 151.0
YYD2_k127_5727153_3 PFAM response regulator receiver K07657 - - 0.000000000000000000000004696 115.0
YYD2_k127_5727153_4 response regulator - - - 0.0000000000000001892 90.0
YYD2_k127_5727153_5 energy transducer activity K03832 - - 0.0003777 48.0
YYD2_k127_5728136_0 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002568 252.0
YYD2_k127_5728136_1 - - - - 0.0000000000000002814 84.0
YYD2_k127_5728136_2 - - - - 0.000000211 63.0
YYD2_k127_5731303_0 Spermidine synthase K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005947 384.0
YYD2_k127_5731303_1 Domain of unknown function (DUF4185) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 309.0
YYD2_k127_5731303_2 Sigma-70, region 4 K03088 - - 0.000000000000000000001199 102.0
YYD2_k127_5731303_4 OmpW family K07275 - - 0.0000005346 59.0
YYD2_k127_573415_0 PFAM Amidohydrolase family K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 293.0
YYD2_k127_573415_1 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000002757 173.0
YYD2_k127_5738539_0 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009158 378.0
YYD2_k127_5738539_1 PFAM PfkB domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 351.0
YYD2_k127_5738539_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000271 201.0
YYD2_k127_5738539_3 NusB family K03625 - - 0.000000000000000000000000000001747 139.0
YYD2_k127_5738539_4 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.00000000000000000000000001421 125.0
YYD2_k127_5738539_5 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000000000000009791 91.0
YYD2_k127_5738539_6 DNA polymerase III, delta subunit K02340 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.00001002 58.0
YYD2_k127_5747172_0 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 544.0
YYD2_k127_5747172_1 Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 537.0
YYD2_k127_5747172_10 Protein of unknown function (DUF1054) - - - 0.000002395 57.0
YYD2_k127_5747172_11 Outer membrane efflux protein - - - 0.000008028 59.0
YYD2_k127_5747172_12 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0001076 54.0
YYD2_k127_5747172_2 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000321 314.0
YYD2_k127_5747172_3 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002046 300.0
YYD2_k127_5747172_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993 - - 0.0000000000000000000000000000000000000000000000000001136 199.0
YYD2_k127_5747172_5 Lysin motif - - - 0.00000000000000000000000000000000002162 151.0
YYD2_k127_5747172_6 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000000000000000000000007237 139.0
YYD2_k127_5747172_7 transcriptional regulator - - - 0.00000000000000000008875 98.0
YYD2_k127_5747172_8 - - - - 0.00000005973 63.0
YYD2_k127_5747172_9 Transcriptional regulatory protein, C terminal K02483,K07672 - - 0.0000001673 64.0
YYD2_k127_5753278_0 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000003394 227.0
YYD2_k127_5753278_1 domain protein K03088,K20276 - - 0.00000000002722 75.0
YYD2_k127_5754659_0 Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs K05544 - 1.3.1.89 0.000000000000000000000000000000000000000000000000000000000000000005614 243.0
YYD2_k127_5754659_1 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000006142 175.0
YYD2_k127_5754659_2 Anti-sigma-K factor rskA - - - 0.000000000000000000000000000000000000000006937 170.0
YYD2_k127_5754659_3 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000008469 157.0
YYD2_k127_5754659_4 OB-fold nucleic acid binding domain K03601 - 3.1.11.6 0.0000000000000000000000000000000938 128.0
YYD2_k127_5754659_5 Exonuclease VII small subunit K03602 - 3.1.11.6 0.000000000000000000001731 102.0
YYD2_k127_5756537_0 CHAT domain - - - 0.0000000000000000000000216 115.0
YYD2_k127_5756537_2 Putative metal-binding motif - - - 0.0007468 52.0
YYD2_k127_5767434_0 Permease family K06901 GO:0003674,GO:0005215,GO:0005345,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006863,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015205,GO:0015207,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0015851,GO:0015853,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:0098655,GO:0098660,GO:0098662,GO:1902600,GO:1904823 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 447.0
YYD2_k127_5767434_1 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 448.0
YYD2_k127_5767434_2 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000003544 264.0
YYD2_k127_5767434_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000009189 230.0
YYD2_k127_5767434_4 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000001939 231.0
YYD2_k127_5767434_5 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000000000005938 194.0
YYD2_k127_5767434_6 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000001367 178.0
YYD2_k127_5767434_7 TIGRFAM RarD protein, DMT superfamily transporter K05786 - - 0.00000000000000000000000000000001096 130.0
YYD2_k127_5767434_8 PFAM pyridoxamine 5'-phosphate oxidase-related, FMN-binding K07226 - - 0.000000000000000009592 95.0
YYD2_k127_5767434_9 Peptide-N-glycosidase F, C terminal - - - 0.0001852 54.0
YYD2_k127_5768854_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 384.0
YYD2_k127_5768854_1 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003765 309.0
YYD2_k127_5768854_2 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006557 294.0
YYD2_k127_5768854_3 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001068 289.0
YYD2_k127_5768854_4 Tetratricopeptide repeat - - - 0.00007055 57.0
YYD2_k127_5780850_0 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily K01002 - 2.7.8.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 356.0
YYD2_k127_5780850_1 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 306.0
YYD2_k127_5780850_2 Carbon-nitrogen hydrolase K03820 - - 0.0000000000000000000000000000000000000002056 172.0
YYD2_k127_5780850_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000005357 146.0
YYD2_k127_5780850_4 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000001015 137.0
YYD2_k127_5780850_5 Acyl-transferase K00655 - 2.3.1.51 0.0000000000000000000000000001235 126.0
YYD2_k127_5780850_6 Sulfurtransferase - - - 0.0000000000000000000001589 99.0
YYD2_k127_5780850_7 RNA polymerase K03088 - - 0.00000002003 61.0
YYD2_k127_5803115_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004975 459.0
YYD2_k127_5803115_1 phosphate acetyltransferase K00625,K13788 - 2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000002768 279.0
YYD2_k127_5803115_2 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000005365 252.0
YYD2_k127_5803115_3 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0000000000000000000000000000000000000000000000000001499 193.0
YYD2_k127_5803115_4 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493,K07320 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009007,GO:0009008,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0032775,GO:0034641,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044728,GO:0046483,GO:0071704,GO:0090304,GO:0140096,GO:0140097,GO:1901360,GO:1901564 2.1.1.297,2.1.1.298 0.000000000000000000000000000000000003734 156.0
YYD2_k127_5803115_5 Hfq protein K03666 - - 0.00000000001302 77.0
YYD2_k127_5803115_6 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.000000001915 61.0
YYD2_k127_5805650_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006194 500.0
YYD2_k127_581571_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 3.019e-284 889.0
YYD2_k127_581571_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 445.0
YYD2_k127_581571_2 PFAM Na dependent nucleoside transporter K03317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003359 338.0
YYD2_k127_581571_3 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 331.0
YYD2_k127_581571_4 MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000005337 154.0
YYD2_k127_581571_5 Sigma-70 region 2 K03088 - - 0.000000000000000000001089 101.0
YYD2_k127_581571_6 Prepilin-type N-terminal cleavage methylation domain K02456,K02650 - - 0.0000000009958 67.0
YYD2_k127_582913_0 HI0933-like protein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006686 434.0
YYD2_k127_582913_1 O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008084 391.0
YYD2_k127_5830735_0 Belongs to the ClpA ClpB family K03696 - - 2.327e-298 935.0
YYD2_k127_5830735_1 polyribonucleotide nucleotidyltransferase activity K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 1.16e-228 731.0
YYD2_k127_5830735_10 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000005978 192.0
YYD2_k127_5830735_11 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000007626 164.0
YYD2_k127_5830735_12 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.0000000000000000000000000000000000000008634 155.0
YYD2_k127_5830735_13 Lysin motif - - - 0.00000000000000000000000000000001233 141.0
YYD2_k127_5830735_14 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000001499 129.0
YYD2_k127_5830735_15 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.00000000000000000000000000001505 134.0
YYD2_k127_5830735_16 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000007789 100.0
YYD2_k127_5830735_17 Protein of unknown function (DUF503) K09764 - - 0.000000000000001559 80.0
YYD2_k127_5830735_18 type II secretion system protein E K02652 - - 0.00000000001502 76.0
YYD2_k127_5830735_19 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000001483 63.0
YYD2_k127_5830735_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 422.0
YYD2_k127_5830735_20 unfolded protein binding K06142 - - 0.000002032 62.0
YYD2_k127_5830735_21 TonB C terminal K03832 - - 0.0002763 53.0
YYD2_k127_5830735_3 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005886 329.0
YYD2_k127_5830735_4 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 295.0
YYD2_k127_5830735_5 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001645 272.0
YYD2_k127_5830735_6 Surface antigen variable number K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000003241 263.0
YYD2_k127_5830735_7 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.00000000000000000000000000000000000000000000000000000001092 208.0
YYD2_k127_5830735_8 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0030312,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000004729 200.0
YYD2_k127_5830735_9 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372,K16363 - 3.5.1.108,4.2.1.59 0.000000000000000000000000000000000000000000000000483 193.0
YYD2_k127_5833918_0 Glycogen debranching enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009842 641.0
YYD2_k127_5833918_1 benzoyl-CoA reductase K04113 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003982 631.0
YYD2_k127_5833918_10 aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 394.0
YYD2_k127_5833918_11 ligase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 390.0
YYD2_k127_5833918_12 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003087 386.0
YYD2_k127_5833918_13 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 361.0
YYD2_k127_5833918_14 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008486 383.0
YYD2_k127_5833918_15 BadF/BadG/BcrA/BcrD ATPase family K04115 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000797 322.0
YYD2_k127_5833918_16 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000101 299.0
YYD2_k127_5833918_17 esterase - - - 0.0000000000000000000000000000000000000000000000000000000000003442 218.0
YYD2_k127_5833918_18 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000002363 199.0
YYD2_k127_5833918_19 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 GO:0003674,GO:0003824,GO:0003908,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0009987,GO:0016020,GO:0016740,GO:0016741,GO:0032259,GO:0033554,GO:0034641,GO:0035510,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051409,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:1901360 2.1.1.63 0.0000000000000000000000000000000000003371 145.0
YYD2_k127_5833918_2 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005868 582.0
YYD2_k127_5833918_20 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000009629 132.0
YYD2_k127_5833918_21 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000004045 133.0
YYD2_k127_5833918_22 Tetratricopeptide repeat - - - 0.0000000000000000000006862 108.0
YYD2_k127_5833918_23 Aspartyl protease - - - 0.0000000000000000003708 102.0
YYD2_k127_5833918_24 transcriptional regulator - - - 0.00000001977 66.0
YYD2_k127_5833918_3 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 551.0
YYD2_k127_5833918_4 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007599 551.0
YYD2_k127_5833918_5 Enoyl-CoA hydratase/isomerase K07539 - 3.7.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 511.0
YYD2_k127_5833918_6 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007208 456.0
YYD2_k127_5833918_7 Benzoyl-CoA reductase subunit K04114 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000763 475.0
YYD2_k127_5833918_8 benzoyl-CoA reductase K04112 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 460.0
YYD2_k127_5833918_9 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005151 426.0
YYD2_k127_5847985_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895,K01908 GO:0003674,GO:0003824,GO:0003987,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006091,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016405,GO:0016874,GO:0016877,GO:0016878,GO:0017144,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046950,GO:0046951,GO:0050218,GO:0070013,GO:0071704,GO:1901568,GO:1901570,GO:1901576,GO:1902224 6.2.1.1,6.2.1.17 0.0 1038.0
YYD2_k127_5847985_1 Polyphosphate kinase middle domain K00937 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004049 605.0
YYD2_k127_5847985_2 tRNA (guanine-N7-)-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 489.0
YYD2_k127_5847985_3 Thrombospondin type 3 repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002633 322.0
YYD2_k127_5847985_4 Endonuclease exonuclease phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005948 294.0
YYD2_k127_5847985_5 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000008074 263.0
YYD2_k127_5847985_6 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000267 125.0
YYD2_k127_5847985_7 anti-sigma regulatory factor, serine threonine protein kinase K04757 - 2.7.11.1 0.00000000000002446 80.0
YYD2_k127_5847985_8 Outer membrane protein W K07275 - - 0.0000000000006943 78.0
YYD2_k127_5847985_9 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000208 64.0
YYD2_k127_590216_0 HupE / UreJ protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003773 304.0
YYD2_k127_590216_1 HupE / UreJ protein K03192 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000768 241.0
YYD2_k127_590216_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000005463 143.0
YYD2_k127_590216_3 HupE / UreJ protein - - - 0.00000000000000000000000000000000009595 152.0
YYD2_k127_590216_4 Sodium/hydrogen exchanger family - - - 0.00000006636 55.0
YYD2_k127_5917898_0 Endothelin-converting enzyme K01415,K07386 - 3.4.24.71 1.559e-267 839.0
YYD2_k127_5917898_1 - - - - 0.000000000000000000000000000001022 134.0
YYD2_k127_5917898_2 - - - - 0.00000003972 60.0
YYD2_k127_5917898_3 Tetratricopeptide repeat - - - 0.00001904 57.0
YYD2_k127_5917898_4 Carboxypeptidase regulatory-like domain - - - 0.0009146 53.0
YYD2_k127_5918461_0 Belongs to the aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 586.0
YYD2_k127_5918461_1 Histidine biosynthesis protein - - - 0.0000000000000000003338 94.0
YYD2_k127_5918461_2 Belongs to the dGTPase family. Type 2 subfamily K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.0000000000001519 71.0
YYD2_k127_59334_0 PFAM LOR SDH bifunctional enzyme conserved region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009398 470.0
YYD2_k127_59334_1 COG0577 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000411 402.0
YYD2_k127_59334_10 EamA-like transporter family - - - 0.00000000000000000000624 104.0
YYD2_k127_59334_11 Belongs to the glycosyl hydrolase 43 family K20276 - - 0.0000001662 66.0
YYD2_k127_59334_12 COG0456 Acetyltransferases K03789 - 2.3.1.128 0.0002055 53.0
YYD2_k127_59334_13 Carbohydrate-binding protein of the ER - - - 0.0003672 55.0
YYD2_k127_59334_14 - - - - 0.0005224 49.0
YYD2_k127_59334_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 368.0
YYD2_k127_59334_3 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007839 348.0
YYD2_k127_59334_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 308.0
YYD2_k127_59334_5 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001225 276.0
YYD2_k127_59334_6 Putative regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000009073 199.0
YYD2_k127_59334_7 Subtilase family K17734 - - 0.0000000000000000000000000000000000000000000000000002754 213.0
YYD2_k127_59334_8 EVE domain - - - 0.00000000000000000000000000000000000000000000000001122 184.0
YYD2_k127_59334_9 sigma factor antagonist activity K04757,K17752 - 2.7.11.1 0.000000000000000000001148 108.0
YYD2_k127_5939840_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009537 398.0
YYD2_k127_5939840_1 methyltransferase activity K13307,K13330 - 2.1.1.235,2.1.1.324 0.00000000000001627 83.0
YYD2_k127_5949793_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003526 535.0
YYD2_k127_5949793_1 Glyceraldehyde-3-phosphate dehydrogenase K00150 - 1.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 447.0
YYD2_k127_5949793_10 Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000001231 235.0
YYD2_k127_5949793_11 Soluble lytic murein transglycosylase-like protein - - - 0.0000000000000000000000000000000000009565 161.0
YYD2_k127_5949793_12 COG2893 Phosphotransferase system, mannose fructose-specific component IIA K02793 - 2.7.1.191 0.0000000000000000000000000000005454 128.0
YYD2_k127_5949793_13 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000002359 115.0
YYD2_k127_5949793_14 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000000362 105.0
YYD2_k127_5949793_15 phosphoenolpyruvate-dependent sugar phosphotransferase system K02784,K08485,K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000705 104.0
YYD2_k127_5949793_16 metal-binding, possibly nucleic acid-binding protein K07040 - - 0.00000000000000000001321 98.0
YYD2_k127_5949793_17 heat shock protein binding K05516,K05801 - - 0.00000000000000000224 99.0
YYD2_k127_5949793_18 chaperone-mediated protein folding - - - 0.0000000000003282 85.0
YYD2_k127_5949793_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0000018,GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0032300,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 402.0
YYD2_k127_5949793_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 391.0
YYD2_k127_5949793_4 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 333.0
YYD2_k127_5949793_5 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 301.0
YYD2_k127_5949793_6 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004711 294.0
YYD2_k127_5949793_7 electron transfer flavoprotein, alpha subunit K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001756 270.0
YYD2_k127_5949793_8 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000001384 276.0
YYD2_k127_5949793_9 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000001976 274.0
YYD2_k127_5998990_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007921 250.0
YYD2_k127_5998990_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000008558 249.0
YYD2_k127_5998990_2 Male sterility protein K15891 - 1.1.1.354 0.000000000000000000000000000000000000000000000000000000000000000005339 258.0
YYD2_k127_5998990_3 PFAM Integral membrane protein DUF92 - GO:0005575,GO:0016020 - 0.00000000000000000000000000000000000000000005744 177.0
YYD2_k127_5998990_4 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744,K09774,K22110 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0006810,GO:0008150,GO:0008643,GO:0008645,GO:0009279,GO:0015267,GO:0015288,GO:0015749,GO:0015750,GO:0015751,GO:0015757,GO:0016020,GO:0019867,GO:0022803,GO:0022829,GO:0022857,GO:0030312,GO:0030313,GO:0031975,GO:0034219,GO:0044462,GO:0044464,GO:0046323,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:1904659 - 0.00000000000000000000000000000000000006186 166.0
YYD2_k127_5998990_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000001039 129.0
YYD2_k127_5998990_6 Carbon-nitrogen hydrolase - - - 0.000000000000000000003485 97.0
YYD2_k127_5998990_7 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17105 - 2.5.1.42 0.0000000000000004205 92.0
YYD2_k127_5998990_8 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000002182 85.0
YYD2_k127_6024658_0 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 433.0
YYD2_k127_6024658_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000008988 207.0
YYD2_k127_6024658_2 Acetyltransferases including N-acetylases of ribosomal proteins - - - 0.000000000000000000000000000000000000000005148 160.0
YYD2_k127_6024658_3 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000000006069 144.0
YYD2_k127_6024658_4 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K00663,K03790 - 2.3.1.128,2.3.1.82 0.000000000000000000000000000003468 128.0
YYD2_k127_6024658_5 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000008939 132.0
YYD2_k127_6024658_6 protocatechuate 3,4-dioxygenase activity K00449 - 1.13.11.3 0.0000000000000000000001162 103.0
YYD2_k127_6024658_7 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.00000000000000006323 81.0
YYD2_k127_6074579_0 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.0000000000000000000000000000000000000000000000000000000000000000005906 245.0
YYD2_k127_6074579_1 AAA domain K08252 - 2.7.10.1 0.000000000000000000000000000000009822 135.0
YYD2_k127_6082249_0 FeS assembly protein SufB K07033,K09014 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0008150,GO:0008152,GO:0009536,GO:0009842,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0071840 - 1.322e-263 816.0
YYD2_k127_6082249_1 ABC transporter K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 395.0
YYD2_k127_6082249_10 - - - - 0.00000007558 66.0
YYD2_k127_6082249_2 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 366.0
YYD2_k127_6082249_3 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 385.0
YYD2_k127_6082249_4 Amidinotransferase K01478 - 3.5.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 337.0
YYD2_k127_6082249_5 Predicted membrane protein (DUF2238) K08984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001366 272.0
YYD2_k127_6082249_6 Uncharacterized protein family (UPF0051) K09015 - - 0.00000000000000000000000000000000000000000000000000000008685 216.0
YYD2_k127_6082249_7 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 K03775 - 5.2.1.8 0.000000000000000000000000000000000000009367 160.0
YYD2_k127_6082249_8 transcriptional regulator - - - 0.00000000000000000000000000000000003705 141.0
YYD2_k127_6082249_9 RNA-DNA hybrid ribonuclease activity K03470,K03471 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000002221 131.0
YYD2_k127_6107439_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000104 128.0
YYD2_k127_6107439_1 Two component regulator propeller - - - 0.00000000000000000000000001623 119.0
YYD2_k127_6107439_2 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino- 5-hydroxymethyl-2-methylpyrimidine (HMP) K20896 - - 0.0000000000000002681 87.0
YYD2_k127_6107439_3 Putative adhesin - - - 0.0005064 52.0
YYD2_k127_6156277_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 1.97e-215 680.0
YYD2_k127_6156277_1 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 387.0
YYD2_k127_6156277_2 cellulase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000001728 259.0
YYD2_k127_6156277_3 cation diffusion facilitator family transporter K16264 GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0044464,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.00000000000000000000000000000000000000000000000000000002399 206.0
YYD2_k127_6156277_4 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000001159 186.0
YYD2_k127_6156277_5 Cation transport protein K03498 - - 0.000000000000000000000000000000000000001955 169.0
YYD2_k127_6156277_6 Mechanosensitive ion channel - - - 0.00000000000009436 85.0
YYD2_k127_6156277_7 Trypsin-like serine protease - - - 0.000000008808 70.0
YYD2_k127_6163952_0 Flavin containing amine oxidoreductase K00231,K01854 - 1.3.3.15,1.3.3.4,5.4.99.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 349.0
YYD2_k127_6163952_1 Ribosomal protein L11 methyltransferase (PrmA) K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007631 301.0
YYD2_k127_6163952_2 phospho-N-acetylmuramoyl-pentapeptide-transferase activity K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 312.0
YYD2_k127_6163952_3 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005584 268.0
YYD2_k127_6163952_4 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008976 256.0
YYD2_k127_6163952_5 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000002192 213.0
YYD2_k127_6163952_6 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000006689 224.0
YYD2_k127_6163952_7 methyltransferase - - - 0.0000000000000000000000000000000000000000000000004622 198.0
YYD2_k127_6163952_8 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000008209 198.0
YYD2_k127_6163952_9 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000003641 87.0
YYD2_k127_6179568_0 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005983 333.0
YYD2_k127_6179568_1 Belongs to the HpcH HpaI aldolase family K01644,K14451 - 3.1.2.30,4.1.3.34 0.0000000000000000000000000000000000000000000000002232 190.0
YYD2_k127_6185690_0 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 476.0
YYD2_k127_6185690_1 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000005572 140.0
YYD2_k127_6186762_0 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008261 282.0
YYD2_k127_6186762_1 Domain of unknown function (DUF4396) - - - 0.000000000000000000000000000000000000000000000000000000000005828 223.0
YYD2_k127_6186762_2 phosphorelay sensor kinase activity K02478,K07704 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016021,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031224,GO:0031226,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0035556,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070887,GO:0071496,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.0000000000000000000000000000000000000000000000006019 196.0
YYD2_k127_6186762_3 COG3279 Response regulator of the LytR AlgR family K02477 - - 0.0000000000000000000000000000000000000000002133 167.0
YYD2_k127_6186762_4 Response regulator of the LytR AlgR family K08083 - - 0.000000000000000000000000000000224 136.0
YYD2_k127_6186762_5 glyoxalase - - - 0.000000000000006771 77.0
YYD2_k127_6186762_6 Iron-sulfur cluster-binding domain - - - 0.00002392 56.0
YYD2_k127_6189851_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0000000000000000000000000000000000000000000000000000007584 200.0
YYD2_k127_6189851_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000002576 180.0
YYD2_k127_6189851_2 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.000000000000000000000000000000000000004342 162.0
YYD2_k127_6189851_3 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000003708 122.0
YYD2_k127_6194783_0 Bacterial PH domain - - - 0.00000000000000000000000000000000000000000000000000000587 199.0
YYD2_k127_6194783_1 bacterial OsmY and nodulation domain K04065 - - 0.00000000000001345 85.0
YYD2_k127_6194783_2 Bacterial PH domain K08981 - - 0.000000000002927 68.0
YYD2_k127_6194783_3 hyperosmotic response K04065 - - 0.00000005966 64.0
YYD2_k127_6194783_4 - - - - 0.0000006275 54.0
YYD2_k127_6217062_0 OPT oligopeptide transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 527.0
YYD2_k127_6217062_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 426.0
YYD2_k127_6217062_10 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000000000000005732 100.0
YYD2_k127_6217062_2 Mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 391.0
YYD2_k127_6217062_3 Hypothetical methyltransferase K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 342.0
YYD2_k127_6217062_4 Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 319.0
YYD2_k127_6217062_5 Allophanate hydrolase subunit 2 K01457,K01941 - 3.5.1.54,6.3.4.6 0.000000000000000000000000000000000000000000000000000000000000000000001708 255.0
YYD2_k127_6217062_6 Belongs to the UPF0271 (lamB) family K07160 - - 0.000000000000000000000000000000000000000000000000000000003562 220.0
YYD2_k127_6217062_7 Allophanate hydrolase subunit 1 K06351 - - 0.00000000000000000000000000000000000000000009441 177.0
YYD2_k127_6217062_8 - - - - 0.000000000000000000000000000000000000000627 153.0
YYD2_k127_6217062_9 CpeT/CpcT family (DUF1001) - - - 0.0000000000000000000000000000000000000324 147.0
YYD2_k127_6244346_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 488.0
YYD2_k127_6244346_1 PFAM aminotransferase class V - GO:0001505,GO:0003674,GO:0003824,GO:0004760,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006082,GO:0006520,GO:0006544,GO:0006545,GO:0006807,GO:0008150,GO:0008152,GO:0008453,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0019265,GO:0019752,GO:0042133,GO:0042136,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007332 285.0
YYD2_k127_6378530_0 AcrB/AcrD/AcrF family - - - 5.035e-241 778.0
YYD2_k127_6378530_1 DNA RNA helicase - - - 1.562e-235 756.0
YYD2_k127_6378530_2 Histidine kinase K07641,K07711 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031667,GO:0035556,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 387.0
YYD2_k127_6378530_3 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 325.0
YYD2_k127_6378530_4 Domain of unknown function (DUF1287) K09974 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001344 263.0
YYD2_k127_6378530_5 PFAM response regulator receiver K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003041 267.0
YYD2_k127_6378530_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000001532 248.0
YYD2_k127_6378530_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000002621 238.0
YYD2_k127_6378530_8 TetR Family - - - 0.00000000000000000000000983 111.0
YYD2_k127_639202_0 Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 500.0
YYD2_k127_639202_1 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005045 366.0
YYD2_k127_639202_2 Low molecular weight phosphotyrosine protein phosphatase - - - 0.00000000000000000000000000000000000000000009474 164.0
YYD2_k127_639202_3 Outer membrane receptor K02014,K16087 - - 0.0000000000000000000000000000000000000147 166.0
YYD2_k127_639202_4 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000000000000000000000000000000246 145.0
YYD2_k127_639202_5 lipolytic protein G-D-S-L family K05970 - 3.1.1.53 0.000000000000000000000000000000000165 153.0
YYD2_k127_639202_6 Sodium Bile acid symporter family K03325 - - 0.00000001078 63.0
YYD2_k127_639202_8 Thrombospondin type 3 repeat - - - 0.000048 57.0
YYD2_k127_663230_0 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 390.0
YYD2_k127_663230_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000001908 221.0
YYD2_k127_663230_2 methyltransferase - - - 0.000000000000000000000000000000000000000000002703 171.0
YYD2_k127_663230_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000001955 146.0
YYD2_k127_663230_4 Domain of unknown function (DUF309) K09763 - - 0.0000000000005699 74.0
YYD2_k127_663230_5 Evidence 4 Homologs of previously reported genes of - - - 0.0004677 50.0
YYD2_k127_671769_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004138 286.0
YYD2_k127_671769_1 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989,K02428 - 2.7.7.56,3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000003385 289.0
YYD2_k127_671769_2 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000001327 206.0
YYD2_k127_671769_3 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000000000000000000000000000001262 195.0
YYD2_k127_671769_4 Sporulation and spore germination - - - 0.0000000000000001907 93.0
YYD2_k127_707606_0 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 331.0
YYD2_k127_707606_1 transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000001268 276.0
YYD2_k127_707606_2 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000004936 220.0
YYD2_k127_707606_3 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008654,GO:0009029,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0046401,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.7.1.130 0.0000000000004392 82.0
YYD2_k127_707606_4 PBS lyase HEAT-like repeat - - - 0.000000000005417 79.0
YYD2_k127_707606_5 PFAM chorismate K01665 - 2.6.1.85 0.00000000001944 77.0
YYD2_k127_735811_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000766 327.0
YYD2_k127_735811_1 Zn_pept K05996 - 3.4.17.18 0.000000000000000000000000000000000000000000000000000000000000000000000000004742 286.0
YYD2_k127_735811_2 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000006573 199.0
YYD2_k127_735811_3 LytTr DNA-binding domain K02477,K07705,K21696 GO:0000156,GO:0000160,GO:0003674,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0023052,GO:0035556,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007 - 0.0000000000000000000000000000000000000000000002782 188.0
YYD2_k127_735811_4 Histidine kinase - - - 0.0000000000000000000000000000000000004662 162.0
YYD2_k127_735811_5 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.000000000000000000000000000000000003186 146.0
YYD2_k127_735811_6 CarboxypepD_reg-like domain K13276 - - 0.000000000000000001062 102.0
YYD2_k127_735811_7 Polymer-forming cytoskeletal - - - 0.000000000003806 79.0
YYD2_k127_735811_8 6-phosphogluconolactonase activity - - - 0.00008581 56.0
YYD2_k127_75739_0 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.00000000000000000000000000000000000006908 159.0
YYD2_k127_75739_1 Associated with various cellular activities K03924 - - 0.00000000000000000000000000000000002062 138.0
YYD2_k127_75739_2 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000003845 130.0
YYD2_k127_75739_3 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000028,GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070475,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140102,GO:1901360,GO:1901363 2.1.1.182 0.000000000002529 79.0
YYD2_k127_758424_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 470.0
YYD2_k127_758424_1 Belongs to the peptidase S51 family K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000001869 268.0
YYD2_k127_758424_2 Cytochrome C biogenesis protein transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000007592 201.0
YYD2_k127_758424_3 Tetratricopeptide repeat - - - 0.000000000002077 79.0
YYD2_k127_763470_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 610.0
YYD2_k127_763470_1 Maf-like protein K06287 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0022402,GO:0022607,GO:0030428,GO:0032506,GO:0044085,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0090529,GO:1902410,GO:1903047 - 0.000000000000000000000000000000000000000005907 164.0
YYD2_k127_763470_2 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.00000006416 63.0
YYD2_k127_774328_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 6.396e-246 781.0
YYD2_k127_774328_1 Aminotransferase class-V K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 352.0
YYD2_k127_774328_2 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000000000000000000000000000000000000000002408 252.0
YYD2_k127_774328_3 ATPases associated with a variety of cellular activities K02003,K02004 - - 0.000000000000000000000000000000000000000000000000000000000005113 230.0
YYD2_k127_774328_4 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.000000000000000000000000000000000000000001048 164.0
YYD2_k127_774328_5 Thrombospondin type 3 repeat - - - 0.0000000000000000000000000000000001116 155.0
YYD2_k127_774328_6 phosphoserine phosphatase K01079 - 3.1.3.3 0.00000000000035 82.0
YYD2_k127_774328_7 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K01179 - 3.2.1.4 0.0002275 55.0
YYD2_k127_780519_0 Heat shock 70 kDa protein K04043 - - 7.965e-281 876.0
YYD2_k127_780519_1 PFAM Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.973e-239 751.0
YYD2_k127_780519_10 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005084 273.0
YYD2_k127_780519_11 MazG nucleotide pyrophosphohydrolase domain K02499,K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009267,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001192 275.0
YYD2_k127_780519_12 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000765 274.0
YYD2_k127_780519_13 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000001222 233.0
YYD2_k127_780519_14 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000005074 233.0
YYD2_k127_780519_15 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000000000000000000000000000000005541 235.0
YYD2_k127_780519_16 PFAM YbaK prolyl-tRNA synthetase associated region K19055 - - 0.000000000000000000000000000000000000000000000000000000000003169 211.0
YYD2_k127_780519_17 B12 binding domain K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000007829 215.0
YYD2_k127_780519_18 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.0000000000000000000000000000000000000000000000000000001672 213.0
YYD2_k127_780519_19 purine ribonucleoside salvage K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000007278 199.0
YYD2_k127_780519_2 aspartate--ammonia ligase K01914 GO:0003674,GO:0003824,GO:0004071,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006528,GO:0006529,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009987,GO:0016053,GO:0016211,GO:0016874,GO:0016879,GO:0016880,GO:0019752,GO:0032787,GO:0033554,GO:0034641,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0051716,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 581.0
YYD2_k127_780519_20 - K01992 - - 0.000000000000000000000000000000000000000000000007168 196.0
YYD2_k127_780519_21 IstB-like ATP binding protein K02315 - - 0.0000000000000000000000000000000000000000000002879 187.0
YYD2_k127_780519_22 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000001049 171.0
YYD2_k127_780519_23 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.000000000000000000000000000000000000000006214 159.0
YYD2_k127_780519_24 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000006631 168.0
YYD2_k127_780519_25 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000005362 152.0
YYD2_k127_780519_26 Mannose-6-phosphate isomerase - - - 0.00000000000000000000000000000000002885 145.0
YYD2_k127_780519_27 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000323 130.0
YYD2_k127_780519_28 regulation of translation K05808,K05809 GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006417,GO:0006446,GO:0006448,GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016020,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0045947,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1990904,GO:2000112,GO:2000113 - 0.0000000000000000000000000000003367 129.0
YYD2_k127_780519_29 cheY-homologous receiver domain - - - 0.0000000000000000000000000008752 128.0
YYD2_k127_780519_3 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002633 443.0
YYD2_k127_780519_30 Regulatory protein - - - 0.0000000000000000000832 103.0
YYD2_k127_780519_31 Domain of unknown function (DUF1844) - - - 0.0000000000000009501 83.0
YYD2_k127_780519_32 Anaphase-promoting complex, cyclosome, subunit 3 - - - 0.000000003143 67.0
YYD2_k127_780519_33 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.000000003727 68.0
YYD2_k127_780519_35 Domain of unknown function (DUF4340) - - - 0.0001446 55.0
YYD2_k127_780519_4 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 365.0
YYD2_k127_780519_5 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005727 344.0
YYD2_k127_780519_6 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 351.0
YYD2_k127_780519_7 PFAM Integral membrane protein TerC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009284 324.0
YYD2_k127_780519_8 PFAM ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 318.0
YYD2_k127_780519_9 Belongs to the 'phage' integrase family K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007416 302.0
YYD2_k127_781878_0 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 5.864e-243 773.0
YYD2_k127_787644_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 5.865e-264 841.0
YYD2_k127_787644_1 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 353.0
YYD2_k127_787644_2 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006959 338.0
YYD2_k127_787644_3 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 301.0
YYD2_k127_787644_5 Protein of unknown function (DUF2752) - - - 0.00000000000000000000003592 108.0
YYD2_k127_787644_6 response to antibiotic - - - 0.00000000000000000002759 95.0
YYD2_k127_787644_7 PFAM regulatory protein GntR HTH K07979 - - 0.000005623 58.0
YYD2_k127_787644_8 Cytochrome c K00405,K03888,K08738 - - 0.0002437 51.0
YYD2_k127_799049_0 extracellular solute-binding protein, family 5 K02035,K13893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002006 295.0
YYD2_k127_799049_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007683 270.0
YYD2_k127_799049_2 PFAM ExsB family protein K06864 - - 0.00000000000000000000000000000000000000000000000000000000000000000001675 244.0
YYD2_k127_799049_3 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000005238 224.0
YYD2_k127_799049_4 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033,K15581 - - 0.00000000000000000000000000000000000000314 168.0
YYD2_k127_799049_5 Thylakoidal processing peptidase K03100 GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009987,GO:0010467,GO:0016020,GO:0016485,GO:0016787,GO:0019538,GO:0031976,GO:0031984,GO:0034357,GO:0034641,GO:0042651,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0051604,GO:0055035,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.89 0.00000000009835 74.0
YYD2_k127_799049_6 Subtilase family - - - 0.000000001264 71.0
YYD2_k127_801674_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 2.459e-286 902.0
YYD2_k127_801674_1 L-aspartate oxidase K00278 - 1.4.3.16 5.449e-235 736.0
YYD2_k127_801674_10 THIamine pyrophosphokinase K00949,K01838 - 2.7.6.2,5.4.2.6 0.00000000008043 72.0
YYD2_k127_801674_11 alpha beta - - - 0.00000569 59.0
YYD2_k127_801674_12 deoxyhypusine monooxygenase activity - - - 0.00002074 57.0
YYD2_k127_801674_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 3.634e-204 656.0
YYD2_k127_801674_3 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 497.0
YYD2_k127_801674_4 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 GO:0003674,GO:0003824,GO:0004551,GO:0004721,GO:0006139,GO:0006464,GO:0006470,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008138,GO:0008150,GO:0008152,GO:0008796,GO:0008803,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0015949,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0019538,GO:0034641,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0140096,GO:1901360,GO:1901564 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 291.0
YYD2_k127_801674_5 proline dipeptidase activity - - - 0.0000000000000000000000000000000000000003549 151.0
YYD2_k127_801674_6 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000004246 145.0
YYD2_k127_801674_7 Cold shock protein K03704 - - 0.00000000000000000000000001195 110.0
YYD2_k127_801674_8 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000002992 106.0
YYD2_k127_801674_9 Phenylacetate-CoA oxygenase K15512 - 1.14.13.208 0.000000000000000002124 85.0
YYD2_k127_829345_0 SpoIVB peptidase S55 K00973,K02414,K21449 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000165 203.0
YYD2_k127_831432_0 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 469.0
YYD2_k127_831432_1 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 378.0
YYD2_k127_850979_0 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004385 287.0
YYD2_k127_850979_1 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.00000000000000000000000000000000000008144 151.0
YYD2_k127_850979_2 - - - - 0.00000000000000000000000008755 121.0
YYD2_k127_871394_0 helix_turn_helix, arabinose operon control protein - - - 0.0000000000005721 79.0
YYD2_k127_871394_1 E-Z type HEAT repeats K00239 - 1.3.5.1,1.3.5.4 0.0001805 55.0
YYD2_k127_871394_2 Helix-turn-helix XRE-family like proteins - - - 0.0006012 50.0
YYD2_k127_899095_0 Berberine and berberine like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004656 386.0
YYD2_k127_899095_1 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000005116 157.0
YYD2_k127_907623_0 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.0000000000000000000000000000000000000000001131 167.0
YYD2_k127_907623_1 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.000000000000000273 92.0
YYD2_k127_928057_0 acyl-CoA dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 357.0
YYD2_k127_928057_1 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.00000008596 66.0