Overview

ID MAG04638
Name YYD2_bin.21
Sample SMP0125
Taxonomy
Kingdom Bacteria
Phylum Zixibacteria
Class MSB-5A5
Order GN15
Family FEB-12
Genus
Species
Assembly information
Completeness (%) 57.42
Contamination (%) 0.98
GC content (%) 56.0
N50 (bp) 4,887
Genome size (bp) 2,044,988

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1882

Gene name Description KEGG GOs EC E-value Score Sequence
YYD2_k127_1001958_0 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 328.0
YYD2_k127_1001958_1 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009008 258.0
YYD2_k127_1001958_2 RmuC family K09760 - - 0.00001148 48.0
YYD2_k127_1005753_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000003399 233.0
YYD2_k127_1005753_1 Redoxin - - - 0.0000000000000000000000000000000000000000000002045 175.0
YYD2_k127_1005753_2 Disulphide bond corrector protein DsbC K04084 - 1.8.1.8 0.00000000000000000000000000000004271 138.0
YYD2_k127_1005753_3 prohibitin homologues - - - 0.00000000000000000000000000000005729 126.0
YYD2_k127_1005753_4 Protease prsW family - - - 0.000000000000000000000000001669 119.0
YYD2_k127_1005961_0 Type II secretion system (T2SS), protein F K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 527.0
YYD2_k127_1005961_1 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 515.0
YYD2_k127_1005961_2 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K02504,K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004246 449.0
YYD2_k127_1005961_3 phosphorelay sensor kinase activity K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008929 307.0
YYD2_k127_1039817_0 peptidase activity, acting on L-amino acid peptides - - - 0.000000000000000000000000000001468 131.0
YYD2_k127_1039817_1 lyase activity K01387,K03301 - 3.4.24.3 0.00000000000000000000000000004028 132.0
YYD2_k127_1039817_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000005759 123.0
YYD2_k127_1039817_3 Outer membrane efflux protein - - - 0.0000000000000000000000000002624 129.0
YYD2_k127_1039817_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000002245 74.0
YYD2_k127_1046224_0 involved in lipopolysaccharide K03606 - - 0.00000000000000000000000000000000000000000000000000000000002486 216.0
YYD2_k127_1046224_1 long-chain fatty acid transport protein - - - 0.00000000000000005607 91.0
YYD2_k127_1046224_2 Protein tyrosine phosphatase, receptor type, s K05695,K06777,K06778,K19599 GO:0000003,GO:0000902,GO:0000904,GO:0001558,GO:0001654,GO:0001667,GO:0001745,GO:0001751,GO:0001754,GO:0002064,GO:0002065,GO:0002066,GO:0003006,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0004888,GO:0005001,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005912,GO:0005924,GO:0005925,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0006935,GO:0007154,GO:0007162,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007297,GO:0007399,GO:0007409,GO:0007411,GO:0007412,GO:0007416,GO:0007423,GO:0007528,GO:0008045,GO:0008150,GO:0008152,GO:0008361,GO:0008594,GO:0009605,GO:0009653,GO:0009887,GO:0009888,GO:0009925,GO:0009987,GO:0010631,GO:0010769,GO:0010975,GO:0016020,GO:0016043,GO:0016049,GO:0016311,GO:0016323,GO:0016477,GO:0016787,GO:0016788,GO:0016791,GO:0019198,GO:0019538,GO:0019904,GO:0019953,GO:0022008,GO:0022407,GO:0022408,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0023052,GO:0030030,GO:0030054,GO:0030055,GO:0030154,GO:0030155,GO:0030182,GO:0030424,GO:0030516,GO:0030707,GO:0030855,GO:0031175,GO:0031252,GO:0031290,GO:0031344,GO:0031346,GO:0032093,GO:0032101,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032879,GO:0032989,GO:0032990,GO:0035335,GO:0036211,GO:0038023,GO:0040007,GO:0040008,GO:0040011,GO:0040012,GO:0042051,GO:0042221,GO:0042330,GO:0042461,GO:0042462,GO:0042578,GO:0042995,GO:0043005,GO:0043170,GO:0043412,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0044703,GO:0045178,GO:0045466,GO:0045467,GO:0045595,GO:0045664,GO:0046530,GO:0048232,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048588,GO:0048589,GO:0048592,GO:0048609,GO:0048638,GO:0048666,GO:0048667,GO:0048675,GO:0048699,GO:0048731,GO:0048749,GO:0048812,GO:0048841,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050767,GO:0050770,GO:0050789,GO:0050793,GO:0050794,GO:0050808,GO:0050896,GO:0050920,GO:0051124,GO:0051128,GO:0051130,GO:0051179,GO:0051239,GO:0051270,GO:0051489,GO:0051491,GO:0051674,GO:0051704,GO:0051716,GO:0051960,GO:0060089,GO:0060269,GO:0060284,GO:0060429,GO:0060491,GO:0060560,GO:0061387,GO:0061564,GO:0065007,GO:0065008,GO:0070161,GO:0071704,GO:0071840,GO:0071944,GO:0090066,GO:0090130,GO:0090132,GO:0090596,GO:0097458,GO:0097485,GO:0098590,GO:0120025,GO:0120032,GO:0120034,GO:0120035,GO:0120036,GO:0120039,GO:0140096,GO:1901564,GO:1902667,GO:1903385,GO:1903386,GO:1990138,GO:2000026 3.1.3.48 0.00005604 53.0
YYD2_k127_1049277_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000001131 221.0
YYD2_k127_1049277_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000002921 132.0
YYD2_k127_1049277_2 phosphorelay signal transduction system - - - 0.000000000000000000004336 97.0
YYD2_k127_1049277_3 histidine kinase A domain protein K02482 - 2.7.13.3 0.0000000000000003783 82.0
YYD2_k127_1064344_0 Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 436.0
YYD2_k127_1064344_1 Subtilase family - - - 0.00000000000000000000005995 114.0
YYD2_k127_1064344_2 COG3209 Rhs family protein - - - 0.000000000000002469 89.0
YYD2_k127_106656_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006989 473.0
YYD2_k127_106656_1 endonuclease III K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000001732 180.0
YYD2_k127_1074547_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11747 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 473.0
YYD2_k127_1074547_1 phosphinothricin N-acetyltransferase activity - - - 0.00000000000000000000000000000000002325 140.0
YYD2_k127_1077152_0 mercury ion transmembrane transporter activity K01533,K17686 GO:0003674,GO:0003824,GO:0005215,GO:0005388,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0008150,GO:0008324,GO:0015075,GO:0015085,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0070588,GO:0070838,GO:0071944,GO:0072511,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.4,3.6.3.54 9.327e-226 722.0
YYD2_k127_1077152_1 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K00404,K00405,K15862 GO:0003674,GO:0003824,GO:0004129,GO:0005215,GO:0005488,GO:0005506,GO:0005507,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008144,GO:0008150,GO:0008152,GO:0008324,GO:0009055,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015002,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0015975,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016310,GO:0016491,GO:0016675,GO:0016676,GO:0016705,GO:0017144,GO:0019411,GO:0019637,GO:0019646,GO:0019693,GO:0019825,GO:0020037,GO:0022857,GO:0022890,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0034641,GO:0036094,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045154,GO:0045333,GO:0046034,GO:0046483,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0055114,GO:0070069,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:1901135,GO:1901360,GO:1901363,GO:1901564,GO:1902600 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 486.0
YYD2_k127_1077152_2 Cytochrome oxidase maturation protein cbb3-type - - - 0.000000003732 62.0
YYD2_k127_1093036_0 Peptidylprolyl isomerase K01802,K03769,K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000006334 284.0
YYD2_k127_1093036_1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 0.00000000000000000000000000000000000000000000001526 173.0
YYD2_k127_1093036_2 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000002014 86.0
YYD2_k127_1093036_3 peptidase M23 - - - 0.00000000000003236 77.0
YYD2_k127_1093036_4 - - - - 0.000000001537 63.0
YYD2_k127_1093561_0 peptidyl-lysine modification to peptidyl-hypusine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 300.0
YYD2_k127_1093561_1 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000000000000000000002358 214.0
YYD2_k127_1093561_2 Formiminotransferase-cyclodeaminase K00603,K01746,K13990 - 2.1.2.5,4.3.1.4 0.00000000000000000000000000000000000000000000000000000001798 201.0
YYD2_k127_1095956_0 PFAM flavodoxin nitric oxide synthase K12264,K22405 - 1.6.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004122 343.0
YYD2_k127_1095956_1 ABC 3 transport family K02075 - - 0.000000000000000000000000000000000000000000000000000001633 198.0
YYD2_k127_1095956_2 Best Blastp hit gi 7462068 pir H72266 astB chuR-related protein - Thermotoga maritima (strain MSB8) gi 4981883 gb AAD36396.1 AE001787_1 (AE001787) astB chuR-related protein Thermotoga maritima , score K06871 - - 0.00000000000000000000000000000000000000000002668 170.0
YYD2_k127_1095956_3 peroxiredoxin activity K03564,K07638 - 1.11.1.15,2.7.13.3 0.00000000000000000000000000000000000000000003263 169.0
YYD2_k127_1095956_4 Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000001095 169.0
YYD2_k127_1095956_5 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000006437 97.0
YYD2_k127_1136906_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 516.0
YYD2_k127_1136906_1 SAICAR synthetase K01923,K01945,K03566 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6,6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 374.0
YYD2_k127_1136906_2 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 329.0
YYD2_k127_1136906_3 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000005263 188.0
YYD2_k127_1136906_4 carboxylic ester hydrolase activity - - - 0.0000000007199 64.0
YYD2_k127_1149144_0 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806,K12503 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31,2.5.1.68 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 294.0
YYD2_k127_1149144_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000002928 178.0
YYD2_k127_1149144_2 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000001398 152.0
YYD2_k127_1149144_3 NlpC p60 family K19224,K21471 - - 0.00000000000000000000000001962 119.0
YYD2_k127_1149144_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000006282 111.0
YYD2_k127_1149144_5 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179,K04040 - 2.5.1.133,2.5.1.39,2.5.1.62 0.00000005056 62.0
YYD2_k127_1149144_6 UbiA prenyltransferase family K03179,K04040 - 2.5.1.133,2.5.1.39,2.5.1.62 0.0000001793 57.0
YYD2_k127_1152487_0 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000004871 199.0
YYD2_k127_1158208_0 Psort location Cytoplasmic, score K01424 - 3.5.1.1 9.146e-241 753.0
YYD2_k127_1158208_1 GatB/GatE catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004278 529.0
YYD2_k127_1158208_2 Propeptide_C25 - - - 0.00000000000000000000000003669 123.0
YYD2_k127_1158208_3 Evidence 5 No homology to any previously reported sequences K20952 - - 0.0000000000000000000003859 111.0
YYD2_k127_1165812_0 ABC transporter - - - 1.645e-197 630.0
YYD2_k127_1165812_1 denitrification pathway K15876 GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0044237,GO:0044425,GO:0045333,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 410.0
YYD2_k127_1165812_2 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005613 368.0
YYD2_k127_1165812_3 metallocarboxypeptidase activity K14054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008227 329.0
YYD2_k127_1190580_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 3.53e-225 722.0
YYD2_k127_1190580_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 548.0
YYD2_k127_1190580_10 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000002418 104.0
YYD2_k127_1190580_11 Ribosome-binding factor A K02834 - - 0.00000000000000000001133 95.0
YYD2_k127_1190580_2 Participates in both transcription termination and antitermination K02600 GO:0001000,GO:0001121,GO:0001125,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043175,GO:0043244,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 463.0
YYD2_k127_1190580_3 Belongs to the peptidase M16 family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 407.0
YYD2_k127_1190580_4 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006865 297.0
YYD2_k127_1190580_5 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001963 278.0
YYD2_k127_1190580_6 Belongs to the ribF family K07011,K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000001358 247.0
YYD2_k127_1190580_7 DHH family K00974,K06881 GO:0008150,GO:0040007 2.7.7.72,3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000001311 242.0
YYD2_k127_1190580_8 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000002638 220.0
YYD2_k127_1190580_9 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000003771 124.0
YYD2_k127_1194467_0 PFAM Polysaccharide export protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004361 394.0
YYD2_k127_1194467_1 long-chain fatty acid transporting porin activity K06076 - - 0.00000000000000000000002357 115.0
YYD2_k127_1194467_2 Putative esterase - - - 0.000000000000001067 88.0
YYD2_k127_1194467_3 domain, Protein K15125,K21449 - - 0.000000000000004222 87.0
YYD2_k127_1194467_4 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000004856 85.0
YYD2_k127_1210372_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004375 517.0
YYD2_k127_1210372_1 amino acid peptide transporter K03305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 366.0
YYD2_k127_1218598_0 bacterial OsmY and nodulation domain - - - 0.000000000000000000000000000000000000000000000000000006486 199.0
YYD2_k127_1218598_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0043254,GO:0044087,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.000000000000000000004064 102.0
YYD2_k127_1218598_2 Periplasmic or secreted lipoprotein - - - 0.00000000000002784 81.0
YYD2_k127_1239445_0 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 - 3.4.21.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 560.0
YYD2_k127_1242769_0 cAMP biosynthetic process K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000001254 213.0
YYD2_k127_130089_0 serine-type peptidase activity K06889,K07214 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 469.0
YYD2_k127_130089_1 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000000000000000000000000000002654 211.0
YYD2_k127_130089_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000002917 69.0
YYD2_k127_1303747_0 cell adhesion involved in biofilm formation - - - 0.0000000000000000000000000000000000000003542 168.0
YYD2_k127_1303747_1 cellulase activity K06882 - - 0.000000000000000000000000000000000000135 149.0
YYD2_k127_1305286_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000001607 169.0
YYD2_k127_1305286_1 CoA binding domain K06929 - - 0.0000000000000000000000000000006229 126.0
YYD2_k127_1305286_2 M61 glycyl aminopeptidase - - - 0.0000000000000000000000009047 120.0
YYD2_k127_1305286_3 phosphorelay signal transduction system - - - 0.0007844 42.0
YYD2_k127_1330311_0 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 341.0
YYD2_k127_1330311_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 324.0
YYD2_k127_1330311_2 Branched-chain amino acid ATP-binding cassette transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 308.0
YYD2_k127_1330311_3 ABC transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 290.0
YYD2_k127_1330311_4 Domain of unknown function (DUF1731) K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001637 270.0
YYD2_k127_1330311_5 Receptor family ligand binding region K01999 - - 0.00000000000000000000008322 99.0
YYD2_k127_1361349_0 Isocitrate/isopropylmalate dehydrogenase K00031 GO:0003674,GO:0003824,GO:0003862,GO:0004448,GO:0004450,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006520,GO:0006551,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0022900,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003301 591.0
YYD2_k127_1361349_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0004470,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0030060,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 413.0
YYD2_k127_1361349_2 Domain of unknown function (DUF2088) - - - 0.000000000000000000000000000000000000000000001046 175.0
YYD2_k127_1363309_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 599.0
YYD2_k127_1363309_1 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006915 316.0
YYD2_k127_1363309_2 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000004805 158.0
YYD2_k127_1363309_3 PFAM 6-pyruvoyl tetrahydropterin synthase and K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000002476 143.0
YYD2_k127_1363309_4 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.0000000000000000000000000000000000005436 144.0
YYD2_k127_1363309_5 Cupin domain - - - 0.000000000000000003572 90.0
YYD2_k127_1363309_6 6 heme-binding sites - - - 0.0000000000000005634 89.0
YYD2_k127_1363309_7 (FHA) domain - - - 0.0000000000008865 73.0
YYD2_k127_1363309_8 zinc ion binding K11997 - - 0.00000000000498 76.0
YYD2_k127_1368431_0 Belongs to the RNA methyltransferase TrmD family K00554,K01770 GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000005021 259.0
YYD2_k127_1368431_1 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000237 150.0
YYD2_k127_1368431_2 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000751 70.0
YYD2_k127_136953_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1304.0
YYD2_k127_136953_1 Predicted membrane protein (DUF2238) K08984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001287 275.0
YYD2_k127_136953_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.0000000000000000000000003371 108.0
YYD2_k127_136953_3 PFAM blue (type 1) copper domain protein - - - 0.00000000000000001032 88.0
YYD2_k127_137565_0 Peptidase M4 K01400 GO:0005575,GO:0005576 3.4.24.28 0.0000000000000000000000000000000000000000000009999 189.0
YYD2_k127_137565_1 PFAM Di-glucose binding within endoplasmic reticulum - - - 0.0000000000000000000001099 101.0
YYD2_k127_137565_2 COG3227 Zinc metalloprotease (elastase) K01400,K08605 - 3.4.24.28,3.4.24.30 0.0000000000004102 80.0
YYD2_k127_137565_3 chlorophyll binding - - - 0.0000007102 58.0
YYD2_k127_1388548_0 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.00000000000000000000000000000000000000000000000000000000000005962 239.0
YYD2_k127_1388548_1 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.00000000000000000000000000000000000000001421 173.0
YYD2_k127_1388548_2 Tetratricopeptide repeat - - - 0.0000002162 63.0
YYD2_k127_1405435_0 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004155 458.0
YYD2_k127_1405435_1 Methyltransferase domain K00588 - 2.1.1.104 0.00000000000000000000000000000000000000000002485 165.0
YYD2_k127_1405435_2 arsenate reductase (glutaredoxin) activity K00537,K16509 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 1.20.4.1 0.00003359 51.0
YYD2_k127_1434192_0 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006143 248.0
YYD2_k127_1434192_1 Predicted membrane protein (DUF2339) - - - 0.0000000000000000000000000000000000000000000000005495 192.0
YYD2_k127_1434192_2 Domain of unknown function (DUF892) - - - 0.0000000000000000000000000000000000000000004262 164.0
YYD2_k127_1434192_3 protein conserved in bacteria - - - 0.0000000000000000000000000000002252 130.0
YYD2_k127_1439668_0 short chain dehydrogenase K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004475 266.0
YYD2_k127_1439668_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000003058 254.0
YYD2_k127_1459601_0 - K01992,K16919 - - 0.0000000000000000000004519 106.0
YYD2_k127_1468916_0 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 334.0
YYD2_k127_1468916_1 PFAM metal-dependent phosphohydrolase HD sub domain K06951 - - 0.0000000000000000000000000000000000000000000000002632 181.0
YYD2_k127_1468916_2 TonB dependent receptor K16089 - - 0.00002373 56.0
YYD2_k127_1477469_0 RNA polymerase sigma-54 factor K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007535 520.0
YYD2_k127_1477469_1 lipopolysaccharide transport protein B ATP-binding component of ABC superfamily K01990,K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 356.0
YYD2_k127_1477469_10 - - - - 0.0005701 51.0
YYD2_k127_1477469_2 NAD-dependent epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 340.0
YYD2_k127_1477469_3 Nucleotidyl transferase K21210 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008744 249.0
YYD2_k127_1477469_4 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000001277 212.0
YYD2_k127_1477469_5 COGs COG1629 Outer membrane receptor protein mostly Fe transport - - - 0.00000000000000000000000000000002049 142.0
YYD2_k127_1477469_6 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.000000009629 63.0
YYD2_k127_1477469_7 Methyltransferase small domain - - - 0.00000109 59.0
YYD2_k127_1477469_8 Carboxypeptidase regulatory-like domain - - - 0.000006062 57.0
YYD2_k127_1477469_9 Tetratricopeptide repeat - - - 0.00003367 57.0
YYD2_k127_1484058_0 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004641 480.0
YYD2_k127_1484058_1 Catalyzes the conversion of chorismate to isochorismate K02361,K02552 - 5.4.4.2 0.0000000000000000000000000000000000000000000000000000000009047 207.0
YYD2_k127_1485907_0 Chain length determinant protein - - - 0.0000000000000000000000000000000000000001472 166.0
YYD2_k127_1485907_1 PFAM Polysaccharide export protein - - - 0.00000000000000000007699 102.0
YYD2_k127_1485907_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00004872 46.0
YYD2_k127_1497991_0 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001294 274.0
YYD2_k127_1497991_1 metallo-protease - - - 0.00000000000007229 82.0
YYD2_k127_1504481_0 Belongs to the carbamoyltransferase HypF family K04656 - - 8.427e-217 699.0
YYD2_k127_1504481_1 Hydrogenase formation hypA family K04654 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 502.0
YYD2_k127_1504481_2 AIR synthase related protein, N-terminal domain K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009743 270.0
YYD2_k127_1504481_3 Hydrogenase accessory protein HypB K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000002805 234.0
YYD2_k127_1504481_4 PFAM hydrogenase expression formation protein (HUPF HYPC) K04653 - - 0.000000000000000000000001083 105.0
YYD2_k127_1506056_0 PFAM Aminotransferase class I and II K05825 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005066 394.0
YYD2_k127_1506056_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000522 112.0
YYD2_k127_1528082_0 ArgK protein K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001056 278.0
YYD2_k127_1528082_1 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000001025 222.0
YYD2_k127_1528082_2 DinB family - - - 0.0000000000000000000000000000000000000000000000000000000008865 204.0
YYD2_k127_1528082_3 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000001344 128.0
YYD2_k127_1528082_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000001513 61.0
YYD2_k127_1528082_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03320 - - 0.0002776 49.0
YYD2_k127_1535589_0 PFAM Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004394 422.0
YYD2_k127_1535589_1 PFAM Phenazine biosynthesis PhzC PhzF protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005085 340.0
YYD2_k127_1535589_2 ATP-dependent DNA helicase K03657 GO:0000018,GO:0000166,GO:0000287,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0009892,GO:0009987,GO:0010605,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030312,GO:0030554,GO:0031323,GO:0031324,GO:0032392,GO:0032508,GO:0032552,GO:0032554,GO:0032558,GO:0032564,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0036094,GO:0040007,GO:0042623,GO:0043138,GO:0043140,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0045910,GO:0045934,GO:0046483,GO:0046872,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051276,GO:0051716,GO:0060255,GO:0060542,GO:0060543,GO:0065007,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.00000000000003107 74.0
YYD2_k127_1539758_0 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 534.0
YYD2_k127_1539758_1 Low molecular weight phosphatase family K03741 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008794,GO:0016491,GO:0030611,GO:0030613,GO:0030614,GO:0042221,GO:0046685,GO:0050896,GO:0055114 1.20.4.1 0.00000000000000000000000000000000000000000008689 164.0
YYD2_k127_1539758_3 STAS domain K04749 - - 0.000000000000000000000000000002707 123.0
YYD2_k127_1545035_0 response regulator K03413,K07699 - - 0.000000000000000000000000000000000000000000738 160.0
YYD2_k127_1545035_1 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000002305 155.0
YYD2_k127_1545035_2 phosphorelay signal transduction system - - - 0.000000000000000000000004445 106.0
YYD2_k127_1545035_3 PFAM PKD domain containing protein - - - 0.00000001009 64.0
YYD2_k127_1567372_0 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000003486 198.0
YYD2_k127_1567372_1 Psort location Cytoplasmic, score 8.96 K08316 - 2.1.1.171 0.00000000000000000000000001677 117.0
YYD2_k127_1567372_2 Belongs to the UPF0102 family K07460 - - 0.0000000000000002991 83.0
YYD2_k127_1568671_0 Glycosyltransferase family 28 N-terminal domain K16444 - 2.4.1.310 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006886 355.0
YYD2_k127_1568671_1 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 346.0
YYD2_k127_1585043_0 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000001675 229.0
YYD2_k127_1585043_1 purine ribonucleoside salvage K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000005471 191.0
YYD2_k127_1585043_2 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000154 154.0
YYD2_k127_1585043_3 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000006059 136.0
YYD2_k127_1585043_4 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0016787,GO:0016817,GO:0016818,GO:0050896 3.6.1.7 0.00000000000000002087 85.0
YYD2_k127_1595707_0 ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006377 426.0
YYD2_k127_1595707_1 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008858 334.0
YYD2_k127_1595707_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000001306 265.0
YYD2_k127_1595707_3 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000000000000147 191.0
YYD2_k127_1595707_4 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.0000000000000000000000000000000000000003408 152.0
YYD2_k127_1595707_5 4Fe-4S ferredoxin, iron-sulfur binding K00176 - 1.2.7.3 0.00000000000002892 77.0
YYD2_k127_1637325_0 Required for chromosome condensation and partitioning K03529,K19171 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004049 391.0
YYD2_k127_1637325_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 329.0
YYD2_k127_1637325_10 Domain of unknown function (DUF4115) - - - 0.0001615 53.0
YYD2_k127_1637325_2 Required for chromosome condensation and partitioning K03529,K19171 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002592 267.0
YYD2_k127_1637325_3 Cytochrome C biogenesis protein transmembrane region K06196,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000004547 216.0
YYD2_k127_1637325_4 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000002063 199.0
YYD2_k127_1637325_5 UTP diphosphatase activity K06287 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0030145,GO:0036218,GO:0036221,GO:0042802,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0047429 - 0.0000000000000000000000000000000000000000000147 169.0
YYD2_k127_1637325_6 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000008231 152.0
YYD2_k127_1637325_7 Thioredoxin K03671 - - 0.00000000000000000000000000000000000001088 147.0
YYD2_k127_1637325_8 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000002324 128.0
YYD2_k127_1637325_9 Response regulator, receiver K11443 - - 0.000001056 61.0
YYD2_k127_1645510_0 PFAM Xanthine uracil vitamin C permease K06901 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 507.0
YYD2_k127_1645510_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 446.0
YYD2_k127_1645510_2 PFAM ketose-bisphosphate aldolase, class-II K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 374.0
YYD2_k127_1645510_3 Belongs to the ComB family K05979 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 3.1.3.71 0.000000000000000000000000000000000000000000000004208 180.0
YYD2_k127_1645510_4 Fructose-bisphosphate aldolase class-II K01624 GO:0003674,GO:0003824,GO:0004332,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016830,GO:0016832,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030312,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035375,GO:0042866,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046914,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 4.1.2.13 0.0000001056 53.0
YYD2_k127_1645884_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 346.0
YYD2_k127_1645884_1 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000000003515 121.0
YYD2_k127_1661250_0 Type IV pilus assembly protein PilM; K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 489.0
YYD2_k127_1661250_1 Secretin and TonB N terminus short domain K02666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 377.0
YYD2_k127_1661250_2 PFAM Fimbrial assembly family protein K02663 - - 0.0000000000000000000000000000000000000002667 158.0
YYD2_k127_1661250_4 PFAM Ig domain protein, group 1 domain protein - - - 0.000000000005297 79.0
YYD2_k127_1661250_5 Pilus assembly protein, PilO K02664 - - 0.00000000005832 71.0
YYD2_k127_1661250_6 Prokaryotic N-terminal methylation motif K08084,K08085 - - 0.0001137 51.0
YYD2_k127_166218_0 oligoendopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 426.0
YYD2_k127_166218_1 negative regulation of DNA recombination K07456 GO:0000018,GO:0008150,GO:0009892,GO:0010605,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0045910,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0080090 - 0.00000000000000000000001268 103.0
YYD2_k127_166218_2 oligoendopeptidase - - - 0.0000000007749 64.0
YYD2_k127_1662336_0 Amidase K02433 - 6.3.5.6,6.3.5.7 1.484e-206 656.0
YYD2_k127_1662336_1 Phosphohydrolase-associated domain K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 387.0
YYD2_k127_1662336_2 Lamin Tail Domain - - - 0.0000000000000000000002509 112.0
YYD2_k127_1670413_0 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009745 348.0
YYD2_k127_1670413_1 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001363 281.0
YYD2_k127_1670413_2 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000000000000000000000000000000000005666 183.0
YYD2_k127_1670413_3 COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K21417 - - 0.000000000000000000000000000000000003257 145.0
YYD2_k127_1670413_4 biopolymer transport protein - - - 0.0000000000000000000000000000000009349 136.0
YYD2_k127_1670413_5 biopolymer transport protein K03559 - - 0.000000000000000000000000000000007722 135.0
YYD2_k127_1670413_6 Polysaccharide biosynthesis protein - - - 0.00000000000000000006092 104.0
YYD2_k127_1670413_7 Tetratricopeptide repeat - - - 0.000000000002295 79.0
YYD2_k127_1670413_9 Tetratricopeptide repeat - - - 0.000308 49.0
YYD2_k127_170179_0 amine dehydrogenase activity - - - 2.102e-211 685.0
YYD2_k127_170179_1 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 540.0
YYD2_k127_170179_2 RNase_H superfamily K07502 - - 0.000000000000000000000000000000000000000000000009217 187.0
YYD2_k127_170179_3 HDOD domain - - - 0.0000000000000000000000000000000000000006405 165.0
YYD2_k127_170179_4 deoxyhypusine monooxygenase activity - - - 0.00000001954 64.0
YYD2_k127_170179_5 Protease prsW family - - - 0.0002485 53.0
YYD2_k127_1727421_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005766 356.0
YYD2_k127_1727421_1 Belongs to the universal ribosomal protein uS2 family K02967 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 295.0
YYD2_k127_1727421_2 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000008162 257.0
YYD2_k127_1727421_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000001216 209.0
YYD2_k127_1727421_4 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000302 177.0
YYD2_k127_1727421_5 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000005552 143.0
YYD2_k127_1727421_6 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000006534 132.0
YYD2_k127_1727421_7 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000001755 101.0
YYD2_k127_1727421_8 AhpC/TSA family K03386 - 1.11.1.15 0.0000000000000001726 82.0
YYD2_k127_1727421_9 Belongs to the SprT family K03095 - - 0.0002569 51.0
YYD2_k127_1732023_0 peptidase activity K20333 - - 0.00000000000000000000000000000000000000000000000002504 194.0
YYD2_k127_1732023_1 Outer membrane protein beta-barrel domain - - - 0.000000000000000002416 93.0
YYD2_k127_1732023_2 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000003414 59.0
YYD2_k127_1736049_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 424.0
YYD2_k127_1736049_1 rRNA binding K02986 GO:0000028,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006417,GO:0006446,GO:0006450,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0015935,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030371,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031554,GO:0031564,GO:0032268,GO:0032269,GO:0032270,GO:0032991,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045727,GO:0045903,GO:0045947,GO:0048027,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990145,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000966 279.0
YYD2_k127_1736049_2 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000001761 184.0
YYD2_k127_1736049_3 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000001033 158.0
YYD2_k127_1736049_4 Ribosomal protein L17 K02879,K16193 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000488 147.0
YYD2_k127_1736049_5 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000005309 83.0
YYD2_k127_1752670_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003451 444.0
YYD2_k127_1752670_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006478 249.0
YYD2_k127_1766635_0 Glutamate-1-semialdehyde aminotransferase K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006818 404.0
YYD2_k127_1766635_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007591 290.0
YYD2_k127_1766635_2 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.0000000000000000000000005865 107.0
YYD2_k127_1775214_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003834 410.0
YYD2_k127_1775214_1 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 308.0
YYD2_k127_1775214_2 ECF sigma factor K03088 - - 0.0000000000000000000000000001346 122.0
YYD2_k127_1775214_3 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 0.000000000000000000000000001262 121.0
YYD2_k127_1775214_4 Putative zinc-finger - - - 0.0000006101 59.0
YYD2_k127_1783721_0 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 3.904e-195 617.0
YYD2_k127_1812860_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000006271 128.0
YYD2_k127_1812860_1 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000000002864 115.0
YYD2_k127_1812860_2 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000005343 72.0
YYD2_k127_1812860_3 PFAM regulatory protein TetR - - - 0.000001204 51.0
YYD2_k127_1812860_4 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000003141 53.0
YYD2_k127_1830875_0 Alginate export - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 295.0
YYD2_k127_1830875_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000001003 241.0
YYD2_k127_1830875_2 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000254 128.0
YYD2_k127_1830875_3 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.00000000000000000000005703 109.0
YYD2_k127_1830875_4 - - - - 0.000000007383 63.0
YYD2_k127_1845002_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 518.0
YYD2_k127_1845002_1 PFAM NAD dependent epimerase dehydratase family K01784,K02473,K08678 - 4.1.1.35,5.1.3.2,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004655 492.0
YYD2_k127_1845002_10 MatE - - - 0.000002544 52.0
YYD2_k127_1845002_2 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 430.0
YYD2_k127_1845002_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 363.0
YYD2_k127_1845002_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 317.0
YYD2_k127_1845002_5 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004296 278.0
YYD2_k127_1845002_6 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000000000000001379 189.0
YYD2_k127_1845002_7 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000008919 169.0
YYD2_k127_1845002_8 PFAM Chain length determinant protein - - - 0.0000000000001761 82.0
YYD2_k127_1845002_9 - - - - 0.0000000006119 60.0
YYD2_k127_1864872_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000481 232.0
YYD2_k127_1864872_1 Pyridine nucleotide-disulphide oxidoreductase dimerisation region K00382 - 1.8.1.4 0.000000000000000000000000000000000000001694 154.0
YYD2_k127_1864872_2 ABC-2 type transporter - - - 0.0000000000000000000000000000000001554 137.0
YYD2_k127_1865180_0 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000002203 222.0
YYD2_k127_1865180_1 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000004633 203.0
YYD2_k127_1865180_2 cellulose binding - - - 0.00000000000000000000000000000001673 141.0
YYD2_k127_1865180_3 long-chain fatty acid transport protein - - - 0.000000001199 68.0
YYD2_k127_1865180_4 long-chain fatty acid transport protein - - - 0.000000002929 60.0
YYD2_k127_1868620_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 5.041e-319 996.0
YYD2_k127_1868620_1 Copper binding proteins, plastocyanin/azurin family - - - 0.00000000002566 72.0
YYD2_k127_1882260_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 471.0
YYD2_k127_1882260_1 Integral membrane sensor signal transduction histidine kinase K07709,K13924 - 2.1.1.80,2.7.13.3,3.1.1.61 0.000000000000000006309 88.0
YYD2_k127_189291_0 Sodium Bile acid symporter family K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 526.0
YYD2_k127_189291_1 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000000000000000000000000000002079 206.0
YYD2_k127_189291_2 PQ loop repeat K15383 - - 0.00000000000000000000001985 103.0
YYD2_k127_189291_3 PFAM regulatory protein, ArsR K03892 - - 0.0000000000000000000002736 102.0
YYD2_k127_189291_4 MerT mercuric transport protein - - - 0.000002217 57.0
YYD2_k127_189291_5 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.000002219 50.0
YYD2_k127_1895233_0 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003737 305.0
YYD2_k127_1895233_1 Two component regulator propeller K19693 - - 0.000000000000000000000000000000000000000000000000000000000000001365 237.0
YYD2_k127_1895233_2 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.000000000000000000000000000000000000000000000000000007837 199.0
YYD2_k127_1895233_3 Evidence 5 No homology to any previously reported sequences - GO:0008150,GO:0031279,GO:0031281,GO:0043085,GO:0044093,GO:0045761,GO:0045762,GO:0050790,GO:0051339,GO:0051349,GO:0065007,GO:0065009 - 0.0000000000002735 80.0
YYD2_k127_196167_0 Ribonuclease E/G family K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 557.0
YYD2_k127_196167_1 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000001728 253.0
YYD2_k127_196167_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000004511 162.0
YYD2_k127_196167_3 Carboxymuconolactone decarboxylase family K01607,K03469 - 3.1.26.4,4.1.1.44 0.0000000000000000000000000000000000000011 150.0
YYD2_k127_196167_4 Preprotein translocase, YajC K03210 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031522,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000678 98.0
YYD2_k127_196167_7 Domain of unknown function (4846) - - - 0.000002691 59.0
YYD2_k127_196167_8 AAA ATPase central domain protein - - - 0.00009716 53.0
YYD2_k127_196167_9 CYTH - - - 0.0001471 52.0
YYD2_k127_1967788_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044464,GO:0051258,GO:0051301,GO:0065003,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 422.0
YYD2_k127_1967788_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006315 381.0
YYD2_k127_1967788_2 Bacterial flagellin C-terminal helical region - - - 0.0007031 47.0
YYD2_k127_2002746_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 394.0
YYD2_k127_2002746_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006817 268.0
YYD2_k127_2002746_2 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000001484 229.0
YYD2_k127_2002746_3 Glucose / Sorbosone dehydrogenase - - - 0.0007058 43.0
YYD2_k127_2011159_0 Bacterial type II and III secretion system protein K02666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 384.0
YYD2_k127_2011159_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 365.0
YYD2_k127_2011159_2 Endonuclease Exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000003373 164.0
YYD2_k127_2011159_3 Type II secretion system (T2SS), protein F K02653 - - 0.000000000000000000000000000000000000000149 165.0
YYD2_k127_2022762_0 Putative zinc binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006083 603.0
YYD2_k127_2022762_1 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 490.0
YYD2_k127_2022762_2 Protein involved in cellulose biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 347.0
YYD2_k127_2022762_3 Membrane protein involved in the export of O-antigen and teichoic acid K03328 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005265 303.0
YYD2_k127_2022762_4 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K00067,K01790 - 1.1.1.133,5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000001352 267.0
YYD2_k127_2022762_5 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000173 261.0
YYD2_k127_2022762_6 ATP-grasp - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002438 265.0
YYD2_k127_2022762_7 Domain of unknown function (DUF4910) - - - 0.000000000000000000000000000000000000000000000000000003926 201.0
YYD2_k127_2025650_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 538.0
YYD2_k127_2025650_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000006536 209.0
YYD2_k127_2025650_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000009535 201.0
YYD2_k127_2025650_3 sequence-specific DNA binding K03719 - - 0.0000000000000000000000000000000000000000000001063 173.0
YYD2_k127_2027445_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 489.0
YYD2_k127_2027445_1 CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004012 338.0
YYD2_k127_2027445_2 Belongs to the ParB family K03497 GO:0005575,GO:0005622,GO:0005623,GO:0007059,GO:0008150,GO:0009295,GO:0009987,GO:0022603,GO:0042173,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0043937,GO:0043938,GO:0044424,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0065007 - 0.00000000000000000000000000000000000000000000000000000000000000000000378 245.0
YYD2_k127_2027445_3 Peptidase, M23 - - - 0.000000000000000000000000000001079 131.0
YYD2_k127_2027445_4 Polymer-forming cytoskeletal - - - 0.000000000000000000002057 99.0
YYD2_k127_2047589_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008388 383.0
YYD2_k127_2048851_0 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000639 317.0
YYD2_k127_2048851_1 GYD domain - - - 0.000000000000000003103 85.0
YYD2_k127_2048851_2 protein conserved in bacteria - - - 0.000000000000005975 79.0
YYD2_k127_2068384_0 Citrate transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 451.0
YYD2_k127_2068384_1 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 302.0
YYD2_k127_2068384_2 acetyltransferase - - - 0.000000000000000000000000000000000000000000001186 175.0
YYD2_k127_2068384_3 UPF0316 protein - - - 0.00000000000000000000000000000000000000006712 159.0
YYD2_k127_2068384_4 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000005064 128.0
YYD2_k127_2070924_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 313.0
YYD2_k127_2070924_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000001743 248.0
YYD2_k127_2070924_2 Peptidase M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000886 227.0
YYD2_k127_2070924_3 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.000000000000000000000000000000000000000000000000000000002081 204.0
YYD2_k127_2070924_4 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07025,K08723 - 3.1.3.5 0.00000000000000000000000000000000000000000002386 170.0
YYD2_k127_2070924_5 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000000004849 160.0
YYD2_k127_2070924_6 SNARE associated Golgi protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000001795 113.0
YYD2_k127_2079263_0 beta Propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005061 488.0
YYD2_k127_2079263_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000403 233.0
YYD2_k127_2079263_2 PFAM thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000007842 180.0
YYD2_k127_2079263_3 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723,K05365 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000001715 169.0
YYD2_k127_2079263_4 COGs COG1629 Outer membrane receptor protein mostly Fe transport - - - 0.0000000000000000005689 100.0
YYD2_k127_2079263_5 Flavin-nucleotide-binding protein K07005 - - 0.0000000000003157 78.0
YYD2_k127_2089114_0 SPFH domain-Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 351.0
YYD2_k127_2089114_1 catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007849 268.0
YYD2_k127_2089114_2 PFAM 6-pyruvoyl tetrahydropterin synthase and K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000000246 204.0
YYD2_k127_2089114_3 6-pyruvoyl tetrahydrobiopterin K01737 GO:0003674,GO:0003824,GO:0003874,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006066,GO:0006082,GO:0006520,GO:0006725,GO:0006728,GO:0006729,GO:0006732,GO:0006807,GO:0007275,GO:0007399,GO:0007417,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016835,GO:0016838,GO:0017144,GO:0018130,GO:0019438,GO:0019751,GO:0019752,GO:0019889,GO:0032501,GO:0032502,GO:0034311,GO:0034312,GO:0034641,GO:0042440,GO:0042558,GO:0042559,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046146,GO:0046148,GO:0046165,GO:0046173,GO:0046483,GO:0046983,GO:0048731,GO:0048856,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 4.1.2.50,4.2.3.12 0.000000000001177 80.0
YYD2_k127_2089114_4 short chain dehydrogenase - - - 0.000002042 52.0
YYD2_k127_2089114_5 Psort location Cytoplasmic, score 8.87 - - - 0.000683 49.0
YYD2_k127_2135658_0 Catalase K03781 - 1.11.1.6 1.066e-235 735.0
YYD2_k127_2135658_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 574.0
YYD2_k127_2135658_10 - - - - 0.000000001433 69.0
YYD2_k127_2135658_11 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000002353 59.0
YYD2_k127_2135658_12 Carrier of the growing fatty acid chain in fatty acid biosynthesis - - - 0.000001003 53.0
YYD2_k127_2135658_2 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009418 492.0
YYD2_k127_2135658_3 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 493.0
YYD2_k127_2135658_4 NAD dependent epimerase dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008564 456.0
YYD2_k127_2135658_5 Bacterial regulatory protein, Fis family K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000002642 252.0
YYD2_k127_2135658_6 CHRD domain - - - 0.0000000000000000000000000000000001175 139.0
YYD2_k127_2135658_7 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997,K17758 - 2.7.8.7,4.2.1.136 0.0000000000000000000000000000009789 126.0
YYD2_k127_2135658_8 BMC - - - 0.0000000000000000000000005456 112.0
YYD2_k127_2135658_9 TonB dependent receptor K02014 - - 0.0000000000000000001231 98.0
YYD2_k127_2148313_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 1.363e-219 713.0
YYD2_k127_2160144_0 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009454 440.0
YYD2_k127_2160144_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 415.0
YYD2_k127_2160144_2 Threonine dehydratase K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008527 368.0
YYD2_k127_2160144_3 nuclear chromosome segregation - - - 0.000000000000001537 80.0
YYD2_k127_2160144_4 - - - - 0.000000000000008515 75.0
YYD2_k127_2167503_0 PFAM aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008445 283.0
YYD2_k127_2167503_1 phosphorelay sensor kinase activity K02660,K03406,K07216,K11525 - - 0.000000000000000000000000000000000000000000000000000000000000000000002063 257.0
YYD2_k127_2167503_2 - - - - 0.00000001503 62.0
YYD2_k127_2167503_3 Domain of unknown function (DUF4154) - - - 0.0002837 50.0
YYD2_k127_2173737_0 Belongs to the DEAD box helicase family K05592,K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 547.0
YYD2_k127_2173737_1 Acetyl-CoA hydrolase/transferase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 458.0
YYD2_k127_2178836_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.00000000000000000000000000000002809 134.0
YYD2_k127_2178836_1 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104,K01808,K07566,K20201 - 2.7.7.87,3.1.3.48,3.9.1.2,5.3.1.6 0.0000000000000000000000001057 112.0
YYD2_k127_2178836_2 Protein of unknown function (DUF3108) - - - 0.0000002631 55.0
YYD2_k127_222240_0 M3B, thimet oligopeptidase F K08602 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 453.0
YYD2_k127_222240_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 341.0
YYD2_k127_222240_2 Transcriptional regulator - - - 0.000000000000000001748 92.0
YYD2_k127_222240_3 SnoaL-like domain - - - 0.00001274 55.0
YYD2_k127_2229333_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1018.0
YYD2_k127_2229333_1 Beta-eliminating lyase K01667 - 4.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 539.0
YYD2_k127_2229333_2 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003905 376.0
YYD2_k127_2229333_3 L-asparaginase II K01424 - 3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000292 276.0
YYD2_k127_2229333_4 - K00241 - - 0.00000000000000000000000000000000000000000000000000000002143 205.0
YYD2_k127_2249093_0 Protein of unknown function (DUF3570) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003951 330.0
YYD2_k127_2249093_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003263 285.0
YYD2_k127_2249093_2 Thioredoxin-like - - - 0.00000000000000000000000000000005361 130.0
YYD2_k127_2249093_3 Domain of unknown function (DUF4266) - - - 0.0000000000000000000146 93.0
YYD2_k127_2258186_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006005 464.0
YYD2_k127_2258186_1 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 409.0
YYD2_k127_2258186_2 PPIC-type PPIASE domain K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 320.0
YYD2_k127_2258186_3 PPIC-type PPIASE domain K03769,K07533 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006071 294.0
YYD2_k127_2258186_4 S4 domain protein - - - 0.000000009442 61.0
YYD2_k127_2291182_0 ABC transporter substrate-binding protein K10232 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 468.0
YYD2_k127_2291182_1 helix_turn _helix lactose operon repressor K02529 - - 0.000000000000000000000000000007311 121.0
YYD2_k127_2297290_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05996,K07752 - 3.4.17.18,3.4.17.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 422.0
YYD2_k127_2297290_1 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.00000000000000000000000000000000000008202 164.0
YYD2_k127_2297290_2 general stress protein K06884 - - 0.00000000000000000000000126 106.0
YYD2_k127_230116_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 2.163e-219 697.0
YYD2_k127_2304991_0 Domain of unknown function (DUF1998) K06877 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007302 410.0
YYD2_k127_2304991_1 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000002081 183.0
YYD2_k127_2304991_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000001694 67.0
YYD2_k127_2304991_3 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000001048 63.0
YYD2_k127_230873_0 ABC transporter K02021,K06147,K06148,K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000998 545.0
YYD2_k127_230873_1 metallopeptidase activity K06402 - - 0.0000000000000000000000000000000000000002457 154.0
YYD2_k127_230873_2 PFAM glycosyl transferase group 1 - - - 0.00000000000000000003531 94.0
YYD2_k127_2319952_0 PFAM NADH Ubiquinone plastoquinone (complex I) K12137 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 370.0
YYD2_k127_2319952_1 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005458 293.0
YYD2_k127_2319952_2 domain, Protein - - - 0.0000000000000000000000000000000002022 150.0
YYD2_k127_2319952_3 Hep Hag repeat protein - - - 0.000000000000654 81.0
YYD2_k127_2322625_0 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002496 288.0
YYD2_k127_2322625_1 PFAM ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002483 258.0
YYD2_k127_2322625_2 HlyD family secretion protein K01993 - - 0.00000000000000000000000001675 113.0
YYD2_k127_2336449_0 aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 384.0
YYD2_k127_2336449_1 TonB-dependent Receptor Plug Domain K02014,K16089,K19611 - - 0.00000000000000000000000000000007458 137.0
YYD2_k127_2336449_2 HmuY protein - - - 0.00000000001662 76.0
YYD2_k127_2345231_0 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 5.387e-234 739.0
YYD2_k127_2345231_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 413.0
YYD2_k127_2345231_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00337,K00338 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000006752 234.0
YYD2_k127_2345231_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000007551 123.0
YYD2_k127_2345231_4 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000004759 107.0
YYD2_k127_2348735_0 Aminotransferase K10907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003562 342.0
YYD2_k127_2348735_1 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.00000000000000000000000000000000000000000000000000000000000000353 228.0
YYD2_k127_2348735_2 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.000000000000000000000000008898 110.0
YYD2_k127_2369075_0 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 401.0
YYD2_k127_2369075_1 PFAM PKD domain containing protein - - - 0.0000000001021 74.0
YYD2_k127_2379817_0 amino acid K11959 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009234 325.0
YYD2_k127_2379817_1 FtsZ-dependent cytokinesis - - - 0.0000000000000000000000597 109.0
YYD2_k127_2383281_0 MreB/Mbl protein K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 534.0
YYD2_k127_2383281_1 phosphoserine phosphatase activity - - - 0.00000000000000000000000000000000000002535 152.0
YYD2_k127_2383281_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000001117 100.0
YYD2_k127_2421541_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00322 - 1.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 444.0
YYD2_k127_2421541_1 PFAM Uncharacterised protein family (UPF0164) - - - 0.000000000000000000000000000000000000000000000000000000000000001434 229.0
YYD2_k127_2421541_2 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000001995 239.0
YYD2_k127_2431129_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 325.0
YYD2_k127_2431129_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K00945,K02945,K03527 - 1.17.7.4,2.7.4.25 0.000000000000000000000000000000000000000000000000000009523 196.0
YYD2_k127_2431129_2 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0008614,GO:0009058,GO:0009108,GO:0009110,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016829,GO:0016840,GO:0016843,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0040007,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0071496,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902494,GO:1903600 4.3.3.6 0.000000000000000000000000000000000000000000004745 169.0
YYD2_k127_2434385_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 490.0
YYD2_k127_2434385_1 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 335.0
YYD2_k127_2434385_2 Respiratory-chain NADH dehydrogenase, 30 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000004893 229.0
YYD2_k127_2434385_3 RNA recognition motif - - - 0.000000000000000000000000009453 113.0
YYD2_k127_2442080_0 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000002279 185.0
YYD2_k127_2442080_1 TM2 domain - - - 0.00000000000000000000000000403 112.0
YYD2_k127_2442080_2 Protein of unknown function DUF116 - - - 0.00000000000000001486 92.0
YYD2_k127_2442080_3 - - - - 0.0004167 46.0
YYD2_k127_2454300_0 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0000166,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0004140,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019103,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032551,GO:0032552,GO:0032553,GO:0032554,GO:0032557,GO:0032558,GO:0032564,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000000000000000000000000000001079 128.0
YYD2_k127_2465390_0 GTPase activity K03596 - - 7.7e-257 805.0
YYD2_k127_2465390_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 407.0
YYD2_k127_2465390_2 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.00000000000000000000001015 103.0
YYD2_k127_2486066_0 GlcNAc-PI de-N-acetylase K01463 - - 0.0000000000000000000000000000000000000000001295 168.0
YYD2_k127_2486066_1 - - - - 0.0000000000000000000000000000000000000000002401 178.0
YYD2_k127_2486066_2 PBS lyase HEAT-like repeat - - - 0.0000938 52.0
YYD2_k127_252229_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088,K00364 GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205,1.7.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009085 581.0
YYD2_k127_252229_1 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000009376 227.0
YYD2_k127_252229_2 C4-type zinc ribbon domain K07164,K22391 - 3.5.4.16 0.00000000000000000000004315 101.0
YYD2_k127_252229_3 - - - - 0.00000000006736 65.0
YYD2_k127_2533319_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03406,K21009 - - 0.000000000000000000000000000000000000000000000000000000000000000001379 255.0
YYD2_k127_2533319_1 Large extracellular alpha-helical protein K06894 - - 0.000000000000000000000000000000000000000000000000000000508 213.0
YYD2_k127_2537896_0 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 352.0
YYD2_k127_2537896_1 Male sterility protein - - - 0.0000000000000000009908 90.0
YYD2_k127_2545061_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008516 564.0
YYD2_k127_2545061_1 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 406.0
YYD2_k127_2545061_2 lactate metabolic process - - - 0.0000000000000000000000000000000000000000000000002374 178.0
YYD2_k127_2545061_3 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000025 202.0
YYD2_k127_2545061_4 Domain of unknown function (DUF4342) - - - 0.00000000000000001128 86.0
YYD2_k127_2545061_5 antisigma factor binding K04749 - - 0.00000000000135 75.0
YYD2_k127_2553032_0 cyclic 2,3-diphosphoglycerate synthetase activity K05716 - - 1.887e-202 638.0
YYD2_k127_2553032_1 Poly A polymerase head domain K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 461.0
YYD2_k127_2553032_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903,K14067 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009361,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0032991,GO:0042709,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045333,GO:0055114,GO:0071704,GO:0072350,GO:1902494 6.2.1.5,6.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000949 443.0
YYD2_k127_2553032_3 Amino acid kinase family K00926 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008804,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019546,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.7.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006924 401.0
YYD2_k127_2553032_4 Belongs to the aldehyde dehydrogenase family K22187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 315.0
YYD2_k127_2564284_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 331.0
YYD2_k127_2564284_1 helix_turn_helix, mercury resistance K22491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005752 258.0
YYD2_k127_2575999_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.652e-265 838.0
YYD2_k127_2575999_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0052855,GO:0052856,GO:0052857 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004533 461.0
YYD2_k127_2575999_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K05886 - 1.1.1.276 0.000000000000000000000000000000000000000000000000000000000000000000000000323 251.0
YYD2_k127_2575999_3 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000842 180.0
YYD2_k127_2575999_4 RNA polymerase sigma factor K03088 - - 0.000000000000000000000000000000001318 138.0
YYD2_k127_2591463_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791,K13019 - 5.1.3.14,5.1.3.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 403.0
YYD2_k127_2591463_1 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000003821 220.0
YYD2_k127_2591463_2 PFAM Glycosyl transferase, group 1 - - - 0.000000000000002502 78.0
YYD2_k127_2591463_3 Lipopolysaccharide biosynthesis protein - - - 0.000008604 57.0
YYD2_k127_2661164_0 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009421 574.0
YYD2_k127_2661164_1 Peptide-N-glycosidase F, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 559.0
YYD2_k127_2661164_2 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000001191 98.0
YYD2_k127_2661164_3 Domain of unknown function (DUF4388) K12132 - 2.7.11.1 0.0000002342 62.0
YYD2_k127_2673478_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 516.0
YYD2_k127_2673478_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003123 365.0
YYD2_k127_2673478_2 PFAM metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000001158 239.0
YYD2_k127_2674180_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169,K03737 - 1.2.7.1 5.149e-313 972.0
YYD2_k127_2674180_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 337.0
YYD2_k127_2674180_2 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000002862 240.0
YYD2_k127_2674180_3 dUTPase K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000004125 235.0
YYD2_k127_2674180_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000004804 241.0
YYD2_k127_2674180_5 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000461 188.0
YYD2_k127_2674180_6 transcriptional regulator, Rrf2 family - - - 0.0000000000000000000000009624 109.0
YYD2_k127_2674180_7 Yip1 domain - - - 0.0001065 53.0
YYD2_k127_2688751_0 oligopeptide transporter, OPT family - - - 6.905e-242 769.0
YYD2_k127_2688751_1 Neutral zinc metallopeptidase K07054 - - 0.00000001996 57.0
YYD2_k127_2697383_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 318.0
YYD2_k127_2697383_1 FlgD Ig-like domain K14194,K19668 - 3.2.1.91 0.0000000000000000001152 102.0
YYD2_k127_2706752_0 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 452.0
YYD2_k127_2706752_1 Dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 380.0
YYD2_k127_2706752_2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000485 355.0
YYD2_k127_2706752_3 response regulator K02481,K07715 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 331.0
YYD2_k127_2706752_4 Outer membrane protein beta-barrel domain - - - 0.00000000000000000003322 99.0
YYD2_k127_2708652_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004276 421.0
YYD2_k127_2708652_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000001751 222.0
YYD2_k127_2708652_2 histidinol phosphate phosphatase K04486 - 3.1.3.15 0.0000000000000000000000000000000000000000001916 170.0
YYD2_k127_2708652_3 alkylbase DNA N-glycosylase activity K03652 - 3.2.2.21 0.000000000000000000000000000000000001972 141.0
YYD2_k127_2708652_4 belongs to the CobB CobQ family K13788 GO:0005575,GO:0005576 2.3.1.8 0.00006219 47.0
YYD2_k127_2710679_0 3-demethylubiquinone-9 3-O-methyltransferase activity K16328 - 2.7.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000002763 243.0
YYD2_k127_2718088_0 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004658 400.0
YYD2_k127_2718088_1 PFAM Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000799 308.0
YYD2_k127_2718088_2 mandelate racemase muconate lactonizing K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.0000000000000000000000000000000000000001827 163.0
YYD2_k127_2718088_3 Cell wall-associated hydrolase (invasion-associated protein) - - - 0.000000000000000000000000000000003292 139.0
YYD2_k127_2720823_0 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 347.0
YYD2_k127_2720823_1 Heparinase II/III-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006394 342.0
YYD2_k127_2720823_2 Biogenesis protein K09792 - - 0.000000000000000000000000000000000000000000000000000001315 200.0
YYD2_k127_2720823_3 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.00000000000000000000000000000000000000000000000242 183.0
YYD2_k127_2720823_4 OsmC-like protein K04063 - - 0.000000000000000000000000000000000000001159 153.0
YYD2_k127_2720823_5 Methyltransferase domain - - - 0.000000000000000000000001356 113.0
YYD2_k127_2720823_6 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000002925 105.0
YYD2_k127_272237_0 AsmA-like C-terminal region - - - 0.00000000000244 80.0
YYD2_k127_2740624_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B - - - 3.677e-249 780.0
YYD2_k127_2740624_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275,K17223 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 409.0
YYD2_k127_2740624_2 cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 301.0
YYD2_k127_2740624_3 signal sequence binding K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004019 271.0
YYD2_k127_2740624_4 Cytochrome oxidase assembly protein K02259 - - 0.0000000000000000000000000000000000000000000000000002932 190.0
YYD2_k127_2740624_5 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.0000000000000000000000002056 111.0
YYD2_k127_2740624_6 - - - - 0.00000002132 58.0
YYD2_k127_2749338_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009111 280.0
YYD2_k127_2749338_1 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000001281 190.0
YYD2_k127_2749338_2 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000000000000000004974 164.0
YYD2_k127_2749338_3 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000214 143.0
YYD2_k127_2749338_4 Protein involved in cellulose biosynthesis - - - 0.0000000309 65.0
YYD2_k127_2749338_5 Two component regulator propeller - - - 0.0000001532 61.0
YYD2_k127_2765173_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009562 334.0
YYD2_k127_2765173_1 binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004415 263.0
YYD2_k127_2765173_2 cyclic nucleotide-binding K01420,K21563 - - 0.0000000000000000000000000000000000000000001309 169.0
YYD2_k127_2765173_3 phosphorelay signal transduction system - - - 0.0000000000000000000000000000004057 125.0
YYD2_k127_2797350_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 357.0
YYD2_k127_2797350_1 Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000000000000000000000000000000000282 215.0
YYD2_k127_2797350_2 Outer membrane lipoprotein K05807,K08309 - - 0.000000000000000000000000000000000000001934 159.0
YYD2_k127_2797493_0 Histidine kinase K14986 - 2.7.13.3 0.0000000000000000000000000000000000000000006287 179.0
YYD2_k127_2797493_1 COGs COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation - - - 0.000000000000000000000000000007452 130.0
YYD2_k127_2807167_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 499.0
YYD2_k127_2807167_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016832,GO:0019637,GO:0044237,GO:0071704,GO:1901135 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 287.0
YYD2_k127_2807167_2 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004904 260.0
YYD2_k127_2807167_3 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000005014 219.0
YYD2_k127_2807167_4 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000003768 210.0
YYD2_k127_2807167_5 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000004014 193.0
YYD2_k127_2807167_6 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000004701 160.0
YYD2_k127_2807167_7 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16785 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015238,GO:0015711,GO:0015893,GO:0016020,GO:0022857,GO:0032217,GO:0032218,GO:0034220,GO:0035461,GO:0042221,GO:0042493,GO:0044464,GO:0050896,GO:0051179,GO:0051180,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0090482,GO:0098656 - 0.00000000000000000000000000000000001408 146.0
YYD2_k127_2807167_8 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01923,K01952 - 6.3.2.6,6.3.5.3 0.0000000000000000001943 91.0
YYD2_k127_2815965_0 PFAM 4-hydroxyphenylacetate 3-hydroxylase N terminal K00483,K14534 - 1.14.14.9,4.2.1.120,5.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006911 570.0
YYD2_k127_2815965_1 aminotransferase class I and II K05825 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008841 379.0
YYD2_k127_2815965_2 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002544 259.0
YYD2_k127_2815965_3 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000002547 230.0
YYD2_k127_2815965_4 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000825 194.0
YYD2_k127_2815965_5 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000002435 159.0
YYD2_k127_2830199_0 - K01992 - - 4.976e-292 922.0
YYD2_k127_2830199_1 Cytochrome b subunit of formate dehydrogenase-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 572.0
YYD2_k127_2830199_2 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 456.0
YYD2_k127_2830199_3 PFAM ABC transporter related K01990,K09697 - 3.6.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 356.0
YYD2_k127_2830199_4 Cytochrome c-type biogenesis protein CcmF C-terminal K02198 - - 0.0000000000000000000006046 109.0
YYD2_k127_2830199_5 domain, Protein - - - 0.000000000007962 67.0
YYD2_k127_2830447_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 499.0
YYD2_k127_2830447_1 NeuB family K03856 - 2.5.1.54 0.0000000000000000002666 90.0
YYD2_k127_2841876_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005058 483.0
YYD2_k127_2841876_1 Belongs to the UPF0145 family - - - 0.00000000000000000000000000000000000004988 144.0
YYD2_k127_2841876_2 phosphoserine phosphatase activity - - - 0.0000000000001942 72.0
YYD2_k127_284609_0 aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 350.0
YYD2_k127_284609_1 dolichyl monophosphate biosynthetic process K08591 - 2.3.1.15 0.000000000000000000000000000000000003285 148.0
YYD2_k127_284609_2 phosphorelay sensor kinase activity K02668 - 2.7.13.3 0.00000000000000000000002943 104.0
YYD2_k127_284609_3 Cold shock protein domain K03704 - - 0.0000000000000000001041 90.0
YYD2_k127_284609_4 PFAM beta-lactamase domain protein K00784 - 3.1.26.11 0.000000000001334 73.0
YYD2_k127_284609_5 peptidylprolyl isomerase K03771 - 5.2.1.8 0.0000000003858 73.0
YYD2_k127_2886492_0 Mannose-6-phosphate isomerase K00971,K01840,K16011 - 2.7.7.13,5.3.1.8,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 385.0
YYD2_k127_2886492_1 Belongs to the acetokinase family K00929 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0044237,GO:0044424,GO:0044464,GO:0047761 2.7.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 374.0
YYD2_k127_2886492_2 phosphate butyryltransferase K00634 - 2.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000001353 233.0
YYD2_k127_2886492_3 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000001444 200.0
YYD2_k127_2886492_4 PFAM Phosphate acetyl butaryl transferase K00634 - 2.3.1.19 0.00000000000000000000000000000000000000000000000005964 190.0
YYD2_k127_2886492_5 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000001067 182.0
YYD2_k127_2886492_6 Sporulation related domain - - - 0.000001243 56.0
YYD2_k127_2895171_0 NADH dehydrogenase K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000003086 196.0
YYD2_k127_2895171_1 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000000000000000000000000000003379 196.0
YYD2_k127_2895171_2 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000003823 145.0
YYD2_k127_2901050_0 5TM C-terminal transporter carbon starvation CstA K06200 - - 8.982e-214 677.0
YYD2_k127_2901050_1 ABC transporter transmembrane region K06147,K11085 - - 0.0000000000000000000000000000000004805 133.0
YYD2_k127_2901050_2 Belongs to the peptidase S8 family K14743 - - 0.00000000000000000001684 100.0
YYD2_k127_2901050_3 - - - - 0.0004594 51.0
YYD2_k127_2907362_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 503.0
YYD2_k127_2907362_1 Redoxin K03386 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0020012,GO:0030682,GO:0042221,GO:0043207,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0051920,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0070887,GO:0075136,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.000000457 55.0
YYD2_k127_2907362_2 Redoxin - - - 0.0000006531 55.0
YYD2_k127_298210_0 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006788 333.0
YYD2_k127_298210_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000002251 172.0
YYD2_k127_298210_2 Metallo-beta-lactamase superfamily K02238 - - 0.0000000000000000000000000000000000005344 161.0
YYD2_k127_2988639_0 WYL domain - - - 0.0000000000000000000000000000000000000000000001719 180.0
YYD2_k127_2988639_1 response to abiotic stimulus - - - 0.000000000000000000000000000000000000002824 149.0
YYD2_k127_2988639_2 WYL domain - - - 0.00008272 52.0
YYD2_k127_2988639_3 - - - - 0.0002721 53.0
YYD2_k127_2989560_0 type II secretion system protein E K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 503.0
YYD2_k127_2989560_1 peptidase activity, acting on L-amino acid peptides K09607 - - 0.0000000000000000000000000000000000000000000000000000000000000000006981 239.0
YYD2_k127_2989560_2 biogenesis protein MshG K02505,K12278 - - 0.000000000000000000000000000000000000000000000000000000000000000004874 240.0
YYD2_k127_2989560_3 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000003077 199.0
YYD2_k127_2989560_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.00000000000000000000000000000001444 144.0
YYD2_k127_2989560_5 arabinogalactan endo-1,4-beta-galactosidase activity - - - 0.0000000000000000000005861 107.0
YYD2_k127_2989560_6 Type II secretion system (T2SS), protein G K02456 - - 0.0000000003278 67.0
YYD2_k127_2989560_7 Probable zinc-ribbon domain - - - 0.0000000003303 64.0
YYD2_k127_2989560_8 Pfam:N_methyl_2 - - - 0.000000007842 63.0
YYD2_k127_3002836_0 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000982 104.0
YYD2_k127_3002836_1 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000003052 98.0
YYD2_k127_3002836_2 PAS domain - - - 0.000000000000000004031 88.0
YYD2_k127_3010403_0 NADH dehydrogenase (quinone) K00335 - 1.6.5.3 3.291e-221 700.0
YYD2_k127_3010403_1 Pyruvate:ferredoxin oxidoreductase core domain II K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 472.0
YYD2_k127_3010403_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 387.0
YYD2_k127_3010403_3 TIGRFAM 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate family K00177 - 1.2.7.3 0.0000000000000000000000000000000000000000000000000002417 193.0
YYD2_k127_3010403_4 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.000000000000000000000000000000000000000006491 160.0
YYD2_k127_3010403_5 Pfam Anion-transporting ATPase - - - 0.00000000000000000003639 95.0
YYD2_k127_3010403_6 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 - 1.2.7.3 0.0000000000000000188 84.0
YYD2_k127_3019609_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016020,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 1.084e-230 728.0
YYD2_k127_3019609_1 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000009498 120.0
YYD2_k127_3019609_2 Psort location OuterMembrane, score 9.92 K01991 - - 0.000003391 56.0
YYD2_k127_3035370_0 (Rhomboid) family K07059 - - 0.000000000000000000000000000000000000000000000000000003929 198.0
YYD2_k127_3035370_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000002616 189.0
YYD2_k127_3035370_2 Peptidase family M23 - - - 0.00000000000003332 78.0
YYD2_k127_3038181_0 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000003889 243.0
YYD2_k127_3038181_1 MlaD protein K02067 - - 0.00000000000000000000000000000000000000001114 165.0
YYD2_k127_3038181_2 - - - - 0.0000000000000000000000000000000221 131.0
YYD2_k127_3038181_3 PFAM ABC transporter related K02065 - - 0.000000000000000000000000008814 116.0
YYD2_k127_3038181_5 Belongs to the UPF0312 family - - - 0.000000003413 61.0
YYD2_k127_304019_0 Domain of unknown function (DUF4153) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 353.0
YYD2_k127_304019_1 MerR, DNA binding K08365 - - 0.0000000000000000000000001316 113.0
YYD2_k127_304019_2 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.00000000000000000009802 100.0
YYD2_k127_304019_3 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.00000000000001752 76.0
YYD2_k127_3042464_0 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 372.0
YYD2_k127_3042464_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003274 282.0
YYD2_k127_3042464_2 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000001138 256.0
YYD2_k127_3042464_3 metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000005473 145.0
YYD2_k127_3042464_4 - - - - 0.0000004005 51.0
YYD2_k127_3046749_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000001369 192.0
YYD2_k127_3046749_1 - - - - 0.00000000000000000000000000000000000000000000212 171.0
YYD2_k127_3046749_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000002637 75.0
YYD2_k127_3068224_0 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000004776 229.0
YYD2_k127_3068224_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000002628 200.0
YYD2_k127_3068224_2 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 0.00009277 45.0
YYD2_k127_3068472_0 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000618 261.0
YYD2_k127_3068472_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K00556,K03218,K03437 - 2.1.1.185,2.1.1.34 0.000000000000000000000000000000000004197 147.0
YYD2_k127_3077197_0 Amidohydrolase family - - - 8.611e-197 634.0
YYD2_k127_3077197_1 COG0665 Glycine D-amino acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 426.0
YYD2_k127_3077197_10 Cation transport regulator K06197 - - 0.0000000000000000000005847 97.0
YYD2_k127_3077197_11 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000003305 82.0
YYD2_k127_3077197_13 hemolysin activation secretion protein - - - 0.000000002709 66.0
YYD2_k127_3077197_14 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.00000008465 64.0
YYD2_k127_3077197_15 domain, Protein - - - 0.00002022 54.0
YYD2_k127_3077197_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 410.0
YYD2_k127_3077197_3 dna ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009577 303.0
YYD2_k127_3077197_4 Co Zn Cd cation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 300.0
YYD2_k127_3077197_5 FAD binding domain K10960,K21401 - 1.3.1.111,1.3.1.83,1.3.99.38 0.00000000000000000000000000000000000000000000000000002366 200.0
YYD2_k127_3077197_6 Domain of Unknown Function (DUF326) - - - 0.0000000000000000000000000000000000000005812 153.0
YYD2_k127_3077197_7 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000004908 149.0
YYD2_k127_3077197_8 Bacterial extracellular solute-binding proteins, family 3 - - - 0.00000000000000000000000000000005248 133.0
YYD2_k127_3077871_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004872 434.0
YYD2_k127_3077871_1 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.0000000000000000000000000000000000000001948 156.0
YYD2_k127_3077871_2 BioY family K02014,K03523 - - 0.0000000000000000000000000000000000000007415 154.0
YYD2_k127_3077871_3 GlcNAc-PI de-N-acetylase K01463 - - 0.0000007305 54.0
YYD2_k127_3086597_0 Phosphate transporter family K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 422.0
YYD2_k127_3086597_1 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000001305 178.0
YYD2_k127_3086597_2 PFAM EamA-like transporter family - - - 0.00000000000000000000000000000000000000000007392 172.0
YYD2_k127_3086597_3 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000207 164.0
YYD2_k127_3091109_1 Malic enzyme K00027,K00029 GO:0003674,GO:0003824,GO:0004470,GO:0004471,GO:0004473,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006094,GO:0006108,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016051,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0019318,GO:0019319,GO:0019752,GO:0032787,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0055114,GO:0071704,GO:1901576 1.1.1.38,1.1.1.40 0.0000000000000000000000001919 111.0
YYD2_k127_3091109_2 PFAM Lectin C-type domain - - - 0.00000000000000001893 95.0
YYD2_k127_3091109_3 Cytochrome C biogenesis protein - - - 0.0000000001907 70.0
YYD2_k127_3091109_4 Belongs to the peptidase S8 family K01337,K01387,K05994,K08604,K14645,K20276 - 3.4.11.10,3.4.21.50,3.4.24.25,3.4.24.3 0.000000003927 68.0
YYD2_k127_3092080_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 4.207e-247 769.0
YYD2_k127_3092080_1 CHASE3 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 568.0
YYD2_k127_3092080_2 cheY-homologous receiver domain - - - 0.0000000000003344 72.0
YYD2_k127_3101234_0 Glycosyl hydrolase family 57 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000973 545.0
YYD2_k127_3101234_1 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000006841 231.0
YYD2_k127_3101234_3 COG0457 FOG TPR repeat - - - 0.0000005966 59.0
YYD2_k127_3105015_0 AMMECR1 K06990,K09141 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 351.0
YYD2_k127_3105015_1 mannose-6-phosphate isomerase - - - 0.00000000000000000000000000000000000000001265 156.0
YYD2_k127_3105015_2 COG2931 RTX toxins and related Ca2 -binding - - - 0.0000000000000001527 88.0
YYD2_k127_3108330_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000002471 153.0
YYD2_k127_3108330_1 Putative bacterial lipoprotein (DUF799) - - - 0.00000000000000001093 91.0
YYD2_k127_3108330_2 PFAM NHL repeat containing protein - - - 0.000000005189 67.0
YYD2_k127_3108330_4 Putative bacterial lipoprotein (DUF799) - - - 0.00000003429 63.0
YYD2_k127_3108330_5 6 heme-binding sites - - - 0.0000276 56.0
YYD2_k127_3109570_0 Peptidase S9, prolyl oligopeptidase active site domain protein K01322 - 3.4.21.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 543.0
YYD2_k127_3109570_1 SWI complex, BAF60b domains - - - 0.0000000003071 61.0
YYD2_k127_3110498_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007769 485.0
YYD2_k127_3110498_1 Glycosyl transferases group 1 K00786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002125 272.0
YYD2_k127_3110498_2 Glucose Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000002656 199.0
YYD2_k127_3110498_3 - - - - 0.000000000000000000000000009901 121.0
YYD2_k127_3110498_4 N-acetyltransferase - - - 0.00000000000000000000003195 109.0
YYD2_k127_3110498_5 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.00000000000000005296 87.0
YYD2_k127_3110498_6 - - - - 0.000000000000437 76.0
YYD2_k127_3123562_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 583.0
YYD2_k127_3123562_1 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 522.0
YYD2_k127_3123562_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009859 499.0
YYD2_k127_3123562_3 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00282 GO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006807,GO:0008150,GO:0008152,GO:0009069,GO:0009987,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019752,GO:0032991,GO:0042133,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901605,GO:1902494,GO:1990204 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 468.0
YYD2_k127_3123562_4 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 333.0
YYD2_k127_3123562_5 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000000000679 177.0
YYD2_k127_3123562_6 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K00627,K01571,K02160 - 2.3.1.12,4.1.1.3 0.0000000000000000000000000000000000000001948 156.0
YYD2_k127_3123562_7 Protein of unknown function, DUF255 K04084 - 1.8.1.8 0.000000198 61.0
YYD2_k127_312499_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.3.1.29,2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 521.0
YYD2_k127_312499_1 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 393.0
YYD2_k127_312499_2 Bacterial regulatory proteins, tetR family K09017 - - 0.0000000000000000005895 94.0
YYD2_k127_312499_3 calcium, potassium:sodium antiporter activity K07301 - - 0.0000000000000000227 85.0
YYD2_k127_3129361_0 ArgE DapE Acy1 family protein K01438,K01439 - 3.5.1.16,3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 370.0
YYD2_k127_3129361_1 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000005841 234.0
YYD2_k127_3129361_2 response to abiotic stimulus - - - 0.000000000000000000000000000000000000000000000004036 181.0
YYD2_k127_3129361_3 Protein of unknown function (DUF1573) - - - 0.00000000000000000000243 103.0
YYD2_k127_3129361_4 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000223 86.0
YYD2_k127_3129361_5 - K01992,K19341 - - 0.0000000002588 70.0
YYD2_k127_3129361_6 Protein of unknown function (DUF1573) - - - 0.0000000003465 68.0
YYD2_k127_3129361_7 protein BT4048 SWALL AAO79153 (EMBL AE016943) (373 aa) fasta scores E() - - - 0.00005156 53.0
YYD2_k127_3129361_8 Protein of unknown function (DUF1573) - - - 0.0007044 46.0
YYD2_k127_3132719_0 e3 binding domain K00658,K09699 GO:0003674,GO:0003824,GO:0004149,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0008289,GO:0009060,GO:0009987,GO:0015980,GO:0016417,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016751,GO:0016999,GO:0017144,GO:0019752,GO:0031405,GO:0031406,GO:0032991,GO:0033293,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045333,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:0140096,GO:1901363,GO:1901681,GO:1902494,GO:1990204,GO:1990234 2.3.1.168,2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008557 308.0
YYD2_k127_3132719_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K10780 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004318,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.3.1.104 0.0000000000000000000000000000000000000000000000000000000000000009761 227.0
YYD2_k127_3132719_2 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03644,K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181,2.8.1.8 0.000000000000000000000000000000000000000000000002637 185.0
YYD2_k127_3145683_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 439.0
YYD2_k127_3145683_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000999 219.0
YYD2_k127_3145683_2 Involved in the tonB-independent uptake of proteins - - - 0.0000000000001796 85.0
YYD2_k127_3145683_3 cell wall. Catalyzes the addition of the first key arabinofuranosyl (Araf) residue from the sugar donor decaprenyl-phospho-arabinose (DPA) on the C-5 of a 6-linked galactofuranosyl (Galf) of the galactan domain, thus 'priming' the galactan for further elaboration by other arabinofuranosyltransferases K13686 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0008194,GO:0008378,GO:0009058,GO:0009059,GO:0009273,GO:0009987,GO:0016020,GO:0016043,GO:0016740,GO:0016757,GO:0016758,GO:0022607,GO:0030312,GO:0034645,GO:0035250,GO:0040007,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0045229,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071766,GO:0071769,GO:0071840,GO:0071944,GO:1901576 2.4.2.46 0.000000001334 72.0
YYD2_k127_3145683_4 repeat protein - - - 0.000001226 62.0
YYD2_k127_3145683_5 resolvase domain protein - - - 0.0003371 47.0
YYD2_k127_3147384_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 - 3.4.21.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007538 281.0
YYD2_k127_3147384_1 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002128 272.0
YYD2_k127_3147384_2 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000000000000000000000000000000005314 199.0
YYD2_k127_3147384_3 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000000000000000000000000000006744 181.0
YYD2_k127_3147384_4 Trypsin-like serine protease K01337 - 3.4.21.50 0.00000000000000000000000003218 126.0
YYD2_k127_3147384_5 polysaccharide catabolic process K01179,K01218 - 3.2.1.4,3.2.1.78 0.000000000000000001331 93.0
YYD2_k127_3147384_6 Bacterial Ig-like domain (group 1) - - - 0.000000000000001002 92.0
YYD2_k127_3147384_7 intracellular chloride channel activity K05027,K05030 - - 0.000001791 61.0
YYD2_k127_3147384_8 Metallo-peptidase family M12B Reprolysin-like - - - 0.000009399 59.0
YYD2_k127_317093_0 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001079 243.0
YYD2_k127_317093_1 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000008477 203.0
YYD2_k127_317093_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000006141 195.0
YYD2_k127_317093_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000003617 150.0
YYD2_k127_317093_4 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000001801 144.0
YYD2_k127_317093_5 PFAM Photosynthetic reaction centre cytochrome C subunit K13992 - - 0.0000000000000001163 89.0
YYD2_k127_317135_0 Thioredoxin-like [2Fe-2S] ferredoxin K05586 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000005171 209.0
YYD2_k127_317135_1 NADH ubiquinone oxidoreductase, NADH-binding K00124,K00335,K18331 - 1.12.1.3,1.6.5.3 0.00000000000000000000158 100.0
YYD2_k127_317135_2 Protein of unknown function (DUF2167) - - - 0.000000000009057 67.0
YYD2_k127_317135_3 - - - - 0.0000005431 61.0
YYD2_k127_317135_4 AsnC family - - - 0.00006241 52.0
YYD2_k127_3196148_0 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000003501 148.0
YYD2_k127_3196148_1 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000004502 148.0
YYD2_k127_3197969_0 Belongs to the bacterial flagellin family K02397 - - 0.00000000000000000000000000000001082 136.0
YYD2_k127_3197969_1 Flagella basal body rod protein K02396 - - 0.00000000000000000000000000000004708 129.0
YYD2_k127_3197969_2 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563,K13626 - - 0.000000000000000001291 89.0
YYD2_k127_3221457_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004823 378.0
YYD2_k127_3221457_1 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000506 63.0
YYD2_k127_3221457_3 chromosome segregation K03497 - - 0.0001757 52.0
YYD2_k127_323439_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 329.0
YYD2_k127_323439_1 COG0512 Anthranilate para-aminobenzoate synthases component II K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000003347 244.0
YYD2_k127_323439_2 MFS/sugar transport protein - - - 0.00000000000000000000000000000000000000000000000000000002035 213.0
YYD2_k127_323439_3 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000001644 161.0
YYD2_k127_3246293_0 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008503 294.0
YYD2_k127_3246293_1 Glycosyl transferase 4-like - - - 0.00000000000000000000000000000000000000000000000000000025 207.0
YYD2_k127_3246293_2 MviN-like protein K03980 - - 0.00000000000000000003682 104.0
YYD2_k127_3246293_3 YCII-related domain - - - 0.000000000000000006024 89.0
YYD2_k127_3248546_0 fumarate hydratase activity K01679 GO:0003674,GO:0003824,GO:0004333,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 473.0
YYD2_k127_3248546_1 aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000756 302.0
YYD2_k127_3248546_2 Peptidase M48 - - - 0.000000000000000000000000000002777 124.0
YYD2_k127_3253502_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 390.0
YYD2_k127_3253502_1 Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 348.0
YYD2_k127_3253502_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01883,K15526 GO:0000166,GO:0001871,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010125,GO:0010126,GO:0010467,GO:0016020,GO:0016070,GO:0016137,GO:0016138,GO:0016874,GO:0016875,GO:0016879,GO:0016880,GO:0017076,GO:0019538,GO:0019752,GO:0030246,GO:0030247,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035446,GO:0035639,GO:0036094,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:2001065 6.1.1.16,6.3.1.13 0.00000000000000000000000000000000000000000000000000000000000002372 221.0
YYD2_k127_325700_0 Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate K00451 - 1.13.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 550.0
YYD2_k127_325700_1 4-Hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 513.0
YYD2_k127_325700_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000002748 116.0
YYD2_k127_3261628_0 glucose sorbosone K00117 - 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 424.0
YYD2_k127_3261628_1 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005059 266.0
YYD2_k127_3261628_2 Methyltransferase type 11 - - - 0.000000000000000000000000002118 122.0
YYD2_k127_3261628_3 Chain length determinant protein - - - 0.00000009658 61.0
YYD2_k127_3285132_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 2.757e-278 867.0
YYD2_k127_3285132_1 (ABC) transporter K06147,K18890 - - 2.963e-198 634.0
YYD2_k127_3285132_2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840,K03431,K15778 - 5.4.2.10,5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 430.0
YYD2_k127_3285132_3 ABC transporter transmembrane K18889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002514 313.0
YYD2_k127_3285132_4 PFAM inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000001326 246.0
YYD2_k127_3285132_5 Parallel beta-helix repeats - - - 0.0000000000000000001455 103.0
YYD2_k127_3285284_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 373.0
YYD2_k127_3285284_1 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000001089 130.0
YYD2_k127_3285754_0 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000000000000000000000000000000000000000000000002504 194.0
YYD2_k127_3285754_1 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000001708 139.0
YYD2_k127_3285754_2 histidine kinase, HAMP K02482 - 2.7.13.3 0.000000000000000000001924 106.0
YYD2_k127_3305284_0 Sugar-transfer associated ATP-grasp - - - 0.000000000000000000000000000000000000000000009043 167.0
YYD2_k127_3305284_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000001461 139.0
YYD2_k127_3330907_0 Large extracellular alpha-helical protein K06894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 554.0
YYD2_k127_3330907_1 Peptidase M1 membrane alanine aminopeptidase - - - 0.00001327 59.0
YYD2_k127_3375882_0 ArgE DapE Acy1 family protein K01438,K01439 - 3.5.1.16,3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000001797 238.0
YYD2_k127_3375882_1 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000005517 223.0
YYD2_k127_3375882_2 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000008111 183.0
YYD2_k127_3377288_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 GO:0003674,GO:0003824,GO:0004749,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016772,GO:0016778,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 400.0
YYD2_k127_3377288_1 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 305.0
YYD2_k127_3377288_2 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008958 303.0
YYD2_k127_3377288_3 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000000002183 197.0
YYD2_k127_3377288_4 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000544 154.0
YYD2_k127_3390750_0 Transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007503 331.0
YYD2_k127_3390750_1 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 292.0
YYD2_k127_3390750_2 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000004575 153.0
YYD2_k127_3390750_3 Colicin V production protein K03558 - - 0.00000000000000000000000000000001615 135.0
YYD2_k127_3390750_4 Ribosomal protein S21 K02970 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000007613 93.0
YYD2_k127_3390750_5 Hit family K02503 - - 0.00000000000002536 76.0
YYD2_k127_3390750_6 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000003963 70.0
YYD2_k127_340357_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 485.0
YYD2_k127_340357_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007419 313.0
YYD2_k127_340357_2 isoprenoid biosynthetic process K00795,K02523,K13789 GO:0003674,GO:0003824,GO:0004161,GO:0004311,GO:0004337,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009536,GO:0009842,GO:0009987,GO:0016114,GO:0016740,GO:0016765,GO:0019637,GO:0033383,GO:0033384,GO:0033385,GO:0033386,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0045337,GO:0045338,GO:0071704,GO:0090407,GO:1901576 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003915 286.0
YYD2_k127_340357_3 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0000000000000000000000000000000000000000000000000002793 187.0
YYD2_k127_340357_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000165 64.0
YYD2_k127_340357_5 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000001171 52.0
YYD2_k127_3419050_0 3-isopropylmalate dehydratase activity K01703,K01705 - 4.2.1.33,4.2.1.35,4.2.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 299.0
YYD2_k127_3419050_1 HIT domain K19710 GO:0003674,GO:0003824,GO:0003877,GO:0004551,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008796,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009987,GO:0015959,GO:0015961,GO:0015965,GO:0015967,GO:0016020,GO:0016462,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0070566,GO:0071704,GO:0071944,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 2.7.7.53 0.000000000000000000000000000000000000000000000001932 177.0
YYD2_k127_3419050_2 integral membrane protein - - - 0.0004168 51.0
YYD2_k127_3430405_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007114 499.0
YYD2_k127_3430405_1 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000007131 203.0
YYD2_k127_3430405_2 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000008066 91.0
YYD2_k127_344475_0 Protein of unknown function (DUF401) K09133 - - 0.00000000000000000000000000000000000000000000000000000000001768 222.0
YYD2_k127_344475_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000007807 153.0
YYD2_k127_344475_2 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000000000000000005285 98.0
YYD2_k127_344475_3 component I K01665,K03342 - 2.6.1.85,4.1.3.38 0.00000000000000007373 89.0
YYD2_k127_344475_5 Putative zinc-finger - - - 0.000001949 58.0
YYD2_k127_3468576_0 Aldehyde dehydrogenase family K00294 - 1.2.1.88 3.093e-206 651.0
YYD2_k127_3468576_1 ORF6N domain - - - 0.0000000000000000000000000000000000000000000002571 174.0
YYD2_k127_3468576_2 Belongs to the ComB family K05979 - 3.1.3.71 0.00000000000000000121 93.0
YYD2_k127_348467_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 453.0
YYD2_k127_348467_1 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K13566 - 3.5.1.3 0.0000000005131 65.0
YYD2_k127_349606_0 Imidazolone-5-propionate hydrolase K01468 - 3.5.2.7 0.0000000000000000000000000000000000000001378 154.0
YYD2_k127_349606_1 long-chain fatty acid transport protein - - - 0.0000000000000000000000000115 117.0
YYD2_k127_349606_2 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.00000000004932 69.0
YYD2_k127_352780_0 Belongs to the GSP D family K02280 - - 0.000000000000000000000000000000000000000000000004834 186.0
YYD2_k127_352780_1 Flp pilus assembly protein RcpC/CpaB - - - 0.000000000000000000000000000000005331 139.0
YYD2_k127_352780_2 PFAM Peptidase A24A, prepilin type IV K02278 - 3.4.23.43 0.00000000000000000000003043 106.0
YYD2_k127_352780_3 TadE-like protein - - - 0.0000000002045 68.0
YYD2_k127_352780_4 PFAM Flp Fap pilin component K02651 - - 0.0003189 45.0
YYD2_k127_352780_5 Flp Fap pilin component K02651 - - 0.0005231 44.0
YYD2_k127_3558589_0 RNA polymerase sigma factor K03088 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0043254,GO:0044087,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000009262 221.0
YYD2_k127_3558589_1 Protein of unknown function, DUF393 - - - 0.000000003826 63.0
YYD2_k127_3558589_2 AntiSigma factor - GO:0000988,GO:0000989,GO:0003674,GO:0005488,GO:0006950,GO:0006979,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009593,GO:0009628,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032502,GO:0042221,GO:0043167,GO:0043169,GO:0043934,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051606,GO:0051775,GO:0051776,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 - 0.000512 51.0
YYD2_k127_3563812_1 O-antigen polymerase - - - 0.00000000001652 76.0
YYD2_k127_3563812_2 SIS domain K03271 - 5.3.1.28 0.00000006023 55.0
YYD2_k127_3563812_3 - - - - 0.0000003636 59.0
YYD2_k127_3588586_0 Belongs to the PEP-utilizing enzyme family K01006,K22424 - 2.7.3.13,2.7.9.1 0.0 1209.0
YYD2_k127_3588586_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001317 284.0
YYD2_k127_3588586_2 synthetase (ADP forming), alpha K01905,K09181,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000006085 254.0
YYD2_k127_3588586_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000001724 224.0
YYD2_k127_3588586_4 - - - - 0.00000000000000000000000000000000000000000000000864 183.0
YYD2_k127_3588586_5 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000000000000000000000005495 177.0
YYD2_k127_3588586_6 - - - - 0.00000000000000000000000000000000000000002338 160.0
YYD2_k127_3588586_7 - - - - 0.000000000000000000000000000000000001376 143.0
YYD2_k127_3609826_0 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004745 345.0
YYD2_k127_3609826_1 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006625 339.0
YYD2_k127_3609826_2 Peptidase M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002276 261.0
YYD2_k127_3609826_3 SprA protein - - - 0.0000005693 63.0
YYD2_k127_3633163_0 ergosterol biosynthetic process K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000002205 239.0
YYD2_k127_3633163_1 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000001047 186.0
YYD2_k127_3633163_2 EamA-like transporter family K07790 - - 0.0000000000000000000000000000000000000000000377 171.0
YYD2_k127_3633163_3 cell adhesion K02456,K02650,K10924,K10925 - - 0.0000000000000000000000000000000000000003485 153.0
YYD2_k127_3633163_4 DNA excision - - - 0.00002651 53.0
YYD2_k127_3673098_0 TIGRFAM FemAB-related protein, PEP-CTERM - - - 0.000000000000000000000000000000000000000000000000000000000000000000001142 250.0
YYD2_k127_3673098_1 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000003484 94.0
YYD2_k127_3673098_2 COG3307 Lipid A core - O-antigen ligase and related enzymes - - - 0.000000000000000002301 99.0
YYD2_k127_3690918_0 FlgD Ig-like domain K14194,K19668 - 3.2.1.91 0.000000000000000000000000000000000000000000000000000000000000000000000000000001412 292.0
YYD2_k127_3690918_1 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000002011 173.0
YYD2_k127_3690918_2 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000003628 133.0
YYD2_k127_3692916_1 cellulose binding - - - 0.0000002852 64.0
YYD2_k127_3694907_0 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 383.0
YYD2_k127_3694907_1 symporter activity K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 313.0
YYD2_k127_3694907_2 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000009778 138.0
YYD2_k127_3696652_0 bacterial-type flagellum-dependent cell motility K02390 GO:0005575,GO:0005623,GO:0009288,GO:0009425,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 316.0
YYD2_k127_3696652_1 Flagellar motor switch protein FliM K02416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001866 254.0
YYD2_k127_3696652_2 Required for flagellar hook formation. May act as a scaffolding protein K02389 GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 - 0.000000000000000000000000000000003512 137.0
YYD2_k127_3696652_3 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.00000000000000000000000000000007954 130.0
YYD2_k127_3696652_4 Flagellar biosynthesis protein - - - 0.0000000000000000003389 93.0
YYD2_k127_3696652_5 PFAM flagellar K02385 - - 0.000000000000000003163 86.0
YYD2_k127_3696652_6 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.0000000000000001566 88.0
YYD2_k127_3696652_7 bacterial-type flagellum assembly K02414 GO:0001539,GO:0006928,GO:0008150,GO:0009987,GO:0040011,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 - 0.00008898 53.0
YYD2_k127_3743419_0 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 1.046e-204 648.0
YYD2_k127_3743419_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 496.0
YYD2_k127_3743419_2 Ndr family - - - 0.00000000000000000000000000001799 121.0
YYD2_k127_3743419_4 - - - - 0.00000000000006069 83.0
YYD2_k127_3743419_5 Protein of unknown function (DUF3276) - - - 0.00005495 48.0
YYD2_k127_3743419_6 Integral membrane protein CcmA involved in cell shape determination - - - 0.00005729 55.0
YYD2_k127_3743567_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 382.0
YYD2_k127_3743567_1 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002827 271.0
YYD2_k127_3743567_2 AsmA-like C-terminal region K07289,K09800 - - 0.0000000000000000000000002507 116.0
YYD2_k127_3751312_0 B-1 B cell differentiation - - - 0.00000000000000000000000000000000000000000000000000000000000003473 227.0
YYD2_k127_3751312_1 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000000000000000001336 170.0
YYD2_k127_3751312_2 nucleotide catabolic process - - - 0.000000000000000000000001822 105.0
YYD2_k127_3755253_0 Glycosyl transferases group 1 K00754 GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005979 405.0
YYD2_k127_3755253_1 Bacillithiol biosynthesis BshC K22136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001223 288.0
YYD2_k127_3755253_2 GlcNAc-PI de-N-acetylase K01463 - - 0.000000000000000000000000000000000000000000000000000000000000000000008077 241.0
YYD2_k127_3764966_0 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007487 376.0
YYD2_k127_3764966_1 Iron-sulfur cluster insertion protein ErpA K15724 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0019538,GO:0022607,GO:0031163,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0071704,GO:0071840,GO:1901564 - 0.0000000004971 62.0
YYD2_k127_376870_0 Glycosyl hydrolases family 38 N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 446.0
YYD2_k127_376870_1 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000003967 238.0
YYD2_k127_376870_2 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.00000000001528 72.0
YYD2_k127_3771625_0 Zinc-uptake complex component A periplasmic K02077 - - 0.000000000000000000000000000000000000000000000000000000000000000000001217 249.0
YYD2_k127_3771625_1 Tfp pilus assembly protein FimV - - - 0.00000000000000000000001815 114.0
YYD2_k127_3771625_2 ABC 3 transport family K02075 - - 0.00000003725 57.0
YYD2_k127_3771625_3 Serine aminopeptidase, S33 - - - 0.0002277 51.0
YYD2_k127_3798947_0 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928,K15792 - 6.3.2.10,6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 398.0
YYD2_k127_3798947_1 Penicillin-binding Protein dimerisation domain K03587,K08384,K08724,K12552,K12556 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 382.0
YYD2_k127_3798947_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000229 149.0
YYD2_k127_3806505_0 PFAM Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase - - - 0.000000000000000004335 89.0
YYD2_k127_3806505_2 Domain of unknown function (DUF4388) - - - 0.0004482 48.0
YYD2_k127_3823878_0 CoA binding domain protein K09181 - - 8.265e-211 669.0
YYD2_k127_3833488_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030145,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043167,GO:0043169,GO:0043436,GO:0043937,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046537,GO:0046700,GO:0046872,GO:0046914,GO:0046939,GO:0050789,GO:0050793,GO:0051186,GO:0051188,GO:0055086,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 556.0
YYD2_k127_3833488_1 AIR synthase related protein, N-terminal domain K01933,K11788 GO:0003674,GO:0003824,GO:0004641,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.1,6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 380.0
YYD2_k127_3833488_2 Sodium hydrogen exchanger K11105 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 345.0
YYD2_k127_3833488_3 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 291.0
YYD2_k127_3833488_4 Carbon-nitrogen hydrolase K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000003387 251.0
YYD2_k127_3833488_5 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.00000000000000000000000000000000000000000002668 170.0
YYD2_k127_3837401_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004117 473.0
YYD2_k127_3837401_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000002882 170.0
YYD2_k127_3858749_0 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 349.0
YYD2_k127_3858749_1 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000002829 55.0
YYD2_k127_3858749_2 Thioesterase superfamily K03186 - 2.5.1.129 0.00003433 48.0
YYD2_k127_3861911_0 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004047 289.0
YYD2_k127_3861911_1 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001113 279.0
YYD2_k127_3861911_2 MATE efflux family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002526 276.0
YYD2_k127_3861911_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 GO:0000166,GO:0003674,GO:0003824,GO:0003856,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0046914,GO:0048037,GO:0050662,GO:0051287,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000009236 238.0
YYD2_k127_3861911_4 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000003713 181.0
YYD2_k127_3861911_5 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.000000000000000000000000000001107 127.0
YYD2_k127_3861911_6 PFAM peptidase M1, membrane alanine aminopeptidase - - - 0.0000000000000000000000344 115.0
YYD2_k127_3861911_7 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000049 60.0
YYD2_k127_3862436_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006718 431.0
YYD2_k127_3862436_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 377.0
YYD2_k127_3862436_2 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008925 268.0
YYD2_k127_3862436_3 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000000007927 125.0
YYD2_k127_3862436_4 PFAM Surface antigen variable number repeat K07277 - - 0.0000000000006153 75.0
YYD2_k127_3863243_0 Participates in initiation and elongation during chromosome replication K02314 GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005742 319.0
YYD2_k127_3863243_1 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000006252 254.0
YYD2_k127_3863243_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000004645 231.0
YYD2_k127_3863243_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000003368 184.0
YYD2_k127_3863243_4 YceI-like domain - - - 0.0000000000000003728 87.0
YYD2_k127_3863243_5 - - - - 0.000000000000004172 83.0
YYD2_k127_3863243_6 Belongs to the Smg family K03747 - - 0.0000000000004897 76.0
YYD2_k127_3863243_7 Cytochrome c - - - 0.00000000005797 73.0
YYD2_k127_3868347_0 Integral membrane protein TerC family K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 362.0
YYD2_k127_3868347_1 Manganese ABC transporter ATP-binding protein K02074,K09820,K11710,K19973 - 3.6.3.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006305 351.0
YYD2_k127_3868347_2 Belongs to the bacterial solute-binding protein 9 family K09815,K11707 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 332.0
YYD2_k127_3868347_3 ABC-type Mn2 Zn2 transport K11705,K11708,K19976 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0010035,GO:0010038,GO:0010043,GO:0016020,GO:0042221,GO:0044464,GO:0050896,GO:0071944 - 0.000000000000000000000000000000000000000000000000001448 188.0
YYD2_k127_3868347_4 Helix-turn-helix diphteria tox regulatory element K03709 - - 0.00000000000000000002211 96.0
YYD2_k127_3887387_0 PhoH-like protein K06217 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 392.0
YYD2_k127_3887387_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 GO:0003674,GO:0003824,GO:0004812,GO:0004815,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006422,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.12 0.00000000000000000000000000000000000000000009659 162.0
YYD2_k127_3887387_2 7TM receptor with intracellular HD hydrolase K07037 - - 0.0001663 53.0
YYD2_k127_391296_0 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.0000000000000000000000000000000000000000000000000000000001257 208.0
YYD2_k127_391296_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000006603 142.0
YYD2_k127_391296_2 -acetyltransferase - - - 0.00000000000000000002988 95.0
YYD2_k127_391296_3 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000207 83.0
YYD2_k127_391296_4 WD40 repeat, subgroup - - - 0.00000002795 66.0
YYD2_k127_3949282_0 ABC transporter K06147,K18890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 413.0
YYD2_k127_3949282_1 (ABC) transporter K06147,K06148,K11085,K16787,K18104,K18889 - 3.6.3.44 0.0000000000000000000000000000715 127.0
YYD2_k127_3949282_2 ATP-binding region ATPase domain protein - - - 0.00000000000001774 80.0
YYD2_k127_3949282_3 ABC transporter substrate binding protein K01989 - - 0.000000000001132 80.0
YYD2_k127_3974207_0 Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004953 323.0
YYD2_k127_3974207_1 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003278 282.0
YYD2_k127_3993482_0 Belongs to the CinA family K03742 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 402.0
YYD2_k127_3993482_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000002464 165.0
YYD2_k127_3993482_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.000000000000000000000000000000000000000001016 163.0
YYD2_k127_3993482_3 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000000001007 156.0
YYD2_k127_3993482_4 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000009311 130.0
YYD2_k127_3993482_5 PFAM phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.000000000000000000000000000005055 126.0
YYD2_k127_4017950_0 phosphoenolpyruvate carboxykinase (ATP) activity K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 1.31e-244 766.0
YYD2_k127_4017950_1 Aminotransferase K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006295 508.0
YYD2_k127_4017950_2 phosphate acetyltransferase K00625 GO:0006082,GO:0006083,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016053,GO:0016999,GO:0017000,GO:0017144,GO:0019413,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006405 353.0
YYD2_k127_4017950_3 Putative regulatory protein - - - 0.00000000005611 63.0
YYD2_k127_4045562_0 Uncharacterized protein conserved in bacteria (DUF2344) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008496 508.0
YYD2_k127_4045562_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409,K03070 GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004471 362.0
YYD2_k127_4045562_2 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0030312,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000802 342.0
YYD2_k127_4045562_3 Metal binding domain of Ada K10778,K13529,K13530,K15051 - 2.1.1.63,3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000004058 227.0
YYD2_k127_4045562_4 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000002743 216.0
YYD2_k127_4045562_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000001026 178.0
YYD2_k127_4045562_6 PASTA K01921,K03587,K08884,K12132 - 2.7.11.1,3.4.16.4,6.3.2.4 0.00000000000000000000000000000000001238 146.0
YYD2_k127_4045562_7 serine-type peptidase activity - - - 0.000000000000000000000000000001454 127.0
YYD2_k127_4046533_0 MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 304.0
YYD2_k127_4046533_1 Protein involved in cellulose biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000003167 201.0
YYD2_k127_4046533_2 MgtE intracellular N domain - - - 0.0000007759 60.0
YYD2_k127_4048978_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000839 546.0
YYD2_k127_4048978_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 534.0
YYD2_k127_4048978_2 Molydopterin dinucleotide binding domain K00123,K00302,K10814 - 1.17.1.9,1.4.99.5,1.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000659 219.0
YYD2_k127_4048978_3 Thioredoxin-like [2Fe-2S] ferredoxin K00334,K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000001115 175.0
YYD2_k127_4048978_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000000000002928 160.0
YYD2_k127_4048978_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000002966 64.0
YYD2_k127_4050743_0 Belongs to the 'phage' integrase family K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000009056 241.0
YYD2_k127_4050743_1 Diguanylate cyclase, GGDEF domain - - - 0.0000000000000000000000000000000000003586 148.0
YYD2_k127_4050743_2 Predicted permease K07089 - - 0.0000000000000000000000000000563 125.0
YYD2_k127_4050743_3 ComF family K02242 - - 0.0000000000000000000001375 106.0
YYD2_k127_4074003_0 Membrane dipeptidase (Peptidase family M19) K01273,K01274 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006021 295.0
YYD2_k127_4074003_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000001636 232.0
YYD2_k127_4083160_0 Hep Hag repeat protein K01406 - 3.4.24.40 0.00000000000000000000000001101 116.0
YYD2_k127_4091698_0 acetate kinase activity K00925 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 531.0
YYD2_k127_4091698_1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 340.0
YYD2_k127_4091698_2 Allergen V5 Tpx-1 family protein K06182,K08372,K12065,K12685,K16785,K16786,K16787 - 5.4.99.21 0.000002359 60.0
YYD2_k127_4092145_0 - - - - 0.000000000000000000000026 109.0
YYD2_k127_4092145_1 NHL repeat - - - 0.00000000000000001801 93.0
YYD2_k127_4092145_2 - - - - 0.00000000125 64.0
YYD2_k127_4101512_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001744 293.0
YYD2_k127_4101512_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000001168 140.0
YYD2_k127_4103952_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000003844 240.0
YYD2_k127_4103952_1 Signal transduction protein - - - 0.00000000000000000000000000002966 132.0
YYD2_k127_4103952_2 phosphorelay signal transduction system - - - 0.0000000000000000000002872 113.0
YYD2_k127_4125343_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 470.0
YYD2_k127_4125343_1 COG0512 Anthranilate para-aminobenzoate synthases component II K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000006295 184.0
YYD2_k127_4127488_0 MutL protein K00854 - 2.7.1.17 4.765e-224 703.0
YYD2_k127_4127488_1 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 464.0
YYD2_k127_4132374_0 PFAM Protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045 418.0
YYD2_k127_4132374_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000002026 124.0
YYD2_k127_4132374_2 - - - - 0.0000000000000000000000004463 117.0
YYD2_k127_4132374_3 Tetratricopeptide repeat - - - 0.0000000397 63.0
YYD2_k127_4132374_4 Trypsin K04771 - 3.4.21.107 0.00002978 52.0
YYD2_k127_4135295_0 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008673 527.0
YYD2_k127_4135295_1 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 294.0
YYD2_k127_4135295_2 Electron transfer flavoprotein K03522,K22432 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 1.3.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 296.0
YYD2_k127_4135295_3 peptidase family M13 K07386 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000395 283.0
YYD2_k127_4135295_4 Dihydrouridine synthase (Dus) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001943 271.0
YYD2_k127_4135295_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000004615 207.0
YYD2_k127_4144037_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 315.0
YYD2_k127_4144037_1 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000005184 208.0
YYD2_k127_4144037_2 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000004607 67.0
YYD2_k127_4148443_0 PFAM Radical SAM domain protein K22226 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 312.0
YYD2_k127_4148443_1 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003377 273.0
YYD2_k127_4148443_2 Best Blastp hit gi 7462068 pir H72266 astB chuR-related protein - Thermotoga maritima (strain MSB8) gi 4981883 gb AAD36396.1 AE001787_1 (AE001787) astB chuR-related protein Thermotoga maritima , score K06871 - - 0.00000000000000000000000000000000000000000000000000000000000000000003331 249.0
YYD2_k127_4185209_0 Belongs to the MurCDEF family K01924 GO:0000166,GO:0000270,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008763,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0035639,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0046872,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006116 474.0
YYD2_k127_4190445_0 Belongs to the PEP-utilizing enzyme family K01007 - 2.7.9.2 0.0 1199.0
YYD2_k127_4190445_1 glutamate dehydrogenase [NAD(P)+] activity K00260,K00261,K00262 GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.2,1.4.1.3,1.4.1.4 2.162e-229 715.0
YYD2_k127_4190445_2 domain, Protein K20276 - - 0.00000000000000000000000000000000000000000000000000000005321 210.0
YYD2_k127_4190445_3 Oxidoreductase family, C-terminal alpha/beta domain K13016 - 1.1.1.335 0.0000000000000000000000000000001029 126.0
YYD2_k127_4191280_0 7TM receptor with intracellular HD hydrolase K07037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 352.0
YYD2_k127_4191280_1 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K01489,K03474,K03595,K07042 GO:0000469,GO:0000478,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016072,GO:0016151,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0030490,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043244,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 2.6.99.2,3.5.4.5 0.000000000000000000009419 98.0
YYD2_k127_4191280_2 Transporter associated domain K06189 - - 0.0000000000000000003638 98.0
YYD2_k127_4198363_0 Transglycosylase SLT domain K08307,K12204 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004768 435.0
YYD2_k127_4198363_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000006034 252.0
YYD2_k127_4198363_2 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000003617 236.0
YYD2_k127_4198363_3 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000001051 212.0
YYD2_k127_4206324_0 PFAM phosphofructokinase K00850 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 512.0
YYD2_k127_4206324_1 TIGRFAM MATE efflux family protein - - - 0.0000000000008209 72.0
YYD2_k127_4206324_3 MatE - - - 0.000007308 50.0
YYD2_k127_4206324_4 Polysaccharide biosynthesis C-terminal domain - - - 0.0003014 47.0
YYD2_k127_421188_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 515.0
YYD2_k127_421188_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 317.0
YYD2_k127_421188_2 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000007142 194.0
YYD2_k127_421188_3 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000106 117.0
YYD2_k127_4249646_0 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000005263 234.0
YYD2_k127_4249646_1 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000000000000000000000000004629 172.0
YYD2_k127_4249646_2 Peptidase M16 domain protein K07263 - - 0.0000000000000000000000000000000525 140.0
YYD2_k127_4254935_0 GTP-binding protein TypA K06207 - - 5.225e-213 668.0
YYD2_k127_4254935_1 multicopper oxidases K06324 - 1.16.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 290.0
YYD2_k127_4273752_0 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003682 262.0
YYD2_k127_4273752_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.0000000000000000000000000000000000000000000000376 184.0
YYD2_k127_4273752_2 cytochrome C family protein - - - 0.0000000000000000000000000000000002248 143.0
YYD2_k127_4273752_3 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 0.00000000000000000001176 94.0
YYD2_k127_4277562_0 Type II secretion system protein G K02456 - - 0.0000001006 62.0
YYD2_k127_4277562_1 PFAM type II secretion system protein G K02456 - - 0.00004161 55.0
YYD2_k127_4277562_2 secretion pathway protein K02456 - - 0.00008099 55.0
YYD2_k127_4344718_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005248 503.0
YYD2_k127_4344718_1 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005943 316.0
YYD2_k127_4353201_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002888 291.0
YYD2_k127_4353201_1 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003666 279.0
YYD2_k127_4358986_0 Belongs to the glycosyl hydrolase 57 family K03406,K16149 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0055114,GO:0071704,GO:1901576 2.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004794 574.0
YYD2_k127_4358986_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 539.0
YYD2_k127_4358986_2 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 317.0
YYD2_k127_4358986_3 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000001213 184.0
YYD2_k127_4358986_4 Lipid A biosynthesis K02517 - 2.3.1.241 0.00000000000000000000000000000000000000005668 162.0
YYD2_k127_4358986_5 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000003285 162.0
YYD2_k127_4358986_6 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000009976 160.0
YYD2_k127_4358986_7 Protein of unknown function (DUF3467) - - - 0.00000000000000000000000000000000001147 138.0
YYD2_k127_4358986_8 Rubrerythrin - - - 0.00000000000000000000000000292 117.0
YYD2_k127_438033_0 domain, Protein - - - 0.0000000000000000000000000008018 115.0
YYD2_k127_438033_1 - K01406 - 3.4.24.40 0.0000000000008185 80.0
YYD2_k127_4398992_0 Heat shock 70 kDa protein K04043 - - 1.836e-255 796.0
YYD2_k127_4398992_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 344.0
YYD2_k127_4398992_2 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000000000000000000006314 224.0
YYD2_k127_4398992_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000005275 170.0
YYD2_k127_4398992_4 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.000000000000000000000000000003726 127.0
YYD2_k127_4398992_5 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000003472 57.0
YYD2_k127_4404533_0 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 537.0
YYD2_k127_4404533_1 CoA binding domain protein K09181 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004242 480.0
YYD2_k127_4404533_2 DNA-binding transcription factor activity - - - 0.0000000000000000000000000000005374 127.0
YYD2_k127_4407045_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 4.67e-276 861.0
YYD2_k127_4407045_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 5.226e-217 685.0
YYD2_k127_4407045_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000001696 219.0
YYD2_k127_4407045_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000000000000000000000000000005377 202.0
YYD2_k127_4410283_0 Protein of unknown function, DUF255 K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 624.0
YYD2_k127_4410283_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 337.0
YYD2_k127_4410283_2 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 292.0
YYD2_k127_4410283_3 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009521 277.0
YYD2_k127_4410283_4 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008503 250.0
YYD2_k127_4410283_5 Capsule assembly protein Wzi - - - 0.0000000000000000000000000000000003791 149.0
YYD2_k127_4410283_6 PFAM Tetratricopeptide repeat - - - 0.000000104 63.0
YYD2_k127_4416546_0 Belongs to the UPF0219 family K01641 - 2.3.3.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009523 420.0
YYD2_k127_4416546_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 390.0
YYD2_k127_4416546_2 PKD domain K01179,K08651 - 3.2.1.4,3.4.21.66 0.00000000000000000000000000000000000000000000000422 195.0
YYD2_k127_4416546_3 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000006412 173.0
YYD2_k127_4423268_0 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000009785 204.0
YYD2_k127_4423268_1 Glyoxalase-like domain - - - 0.00000000000000000000000000000000001501 141.0
YYD2_k127_4423268_2 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000003906 141.0
YYD2_k127_4423268_3 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000006478 142.0
YYD2_k127_4423268_4 DivIVA protein K04074 - - 0.0000000003126 72.0
YYD2_k127_4423268_5 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00003435 52.0
YYD2_k127_4441133_0 synthetase (ADP forming), alpha K01905,K09181,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 428.0
YYD2_k127_4441133_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000001198 185.0
YYD2_k127_4441213_0 Thiamine biosynthesis protein (ThiI) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005468 281.0
YYD2_k127_4441213_1 translation initiation factor activity K03699 - - 0.0000000000000000000000000000000000000000004093 161.0
YYD2_k127_4441213_2 Permease MlaE K02066 - - 0.00000000000000000000000000000000001717 141.0
YYD2_k127_4441749_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 2.237e-263 826.0
YYD2_k127_4441749_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 GO:0003674,GO:0003824,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007373 298.0
YYD2_k127_4441749_2 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000002483 158.0
YYD2_k127_4441749_3 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000003464 127.0
YYD2_k127_4441749_4 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.000000000000000000000002649 107.0
YYD2_k127_4441749_5 2Fe-2S -binding K13483 - - 0.0002536 52.0
YYD2_k127_44691_0 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 445.0
YYD2_k127_44691_1 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000106 173.0
YYD2_k127_4475278_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003957 291.0
YYD2_k127_4477566_0 Fumarylacetoacetate (FAA) hydrolase K16171 - 3.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 458.0
YYD2_k127_4477566_1 Radical SAM superfamily K04070 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000473 277.0
YYD2_k127_4477566_2 Aminotransferase class I and II K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000347 248.0
YYD2_k127_4484854_0 alpha beta alpha domain I K01840 - 5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 497.0
YYD2_k127_4506063_0 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000007094 205.0
YYD2_k127_4506063_1 NUDIX domain - - - 0.000000000000000000000000000000000000000000000001431 180.0
YYD2_k127_4506063_2 STAS domain K04749 - - 0.00000000000000000000000000000000000000000000003725 171.0
YYD2_k127_4506063_3 Anti-sigma regulatory factor (Ser Thr protein kinase) K04757 - 2.7.11.1 0.00000000000000000000000000000000008439 138.0
YYD2_k127_4508374_0 Exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002265 445.0
YYD2_k127_4508374_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 354.0
YYD2_k127_4508374_2 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004428 325.0
YYD2_k127_4508374_3 NAD(P)H-dependent oxidoreductase K19285 - 1.5.1.38 0.000000000000000000000000000000000000000000000000000000001719 210.0
YYD2_k127_4508374_4 Domain of unknown function (DUF5117) - - - 0.0000000000000000000000000002291 121.0
YYD2_k127_4522074_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 398.0
YYD2_k127_4522074_1 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000303 247.0
YYD2_k127_4522074_2 Polysaccharide pyruvyl transferase - - - 0.000000000000000000000000000000000000000000000000001846 200.0
YYD2_k127_4522074_3 Transport permease protein K09688,K09690 - - 0.000000000000000000000000000000000000003183 151.0
YYD2_k127_4571362_0 Belongs to the 5'-nucleotidase family K08693,K11751 - 3.1.3.5,3.1.3.6,3.1.4.16,3.6.1.45 0.00000000000000000000000000000003705 143.0
YYD2_k127_4571362_1 RNA polymerase, sigma-24 subunit, ECF subfamily - - - 0.000000000000000000000000004215 117.0
YYD2_k127_4571362_2 cellulase activity K01201 - 3.2.1.45 0.000000000000000000000002571 119.0
YYD2_k127_4571643_0 FlgD Ig-like domain K14194,K19668 - 3.2.1.91 0.000000000000000000000000000000000000000000000000000002838 217.0
YYD2_k127_4571643_1 phosphorelay signal transduction system K02490 - - 0.000000000000000000000000000000000006634 145.0
YYD2_k127_4584086_0 Methionine gamma-lyase K01758 - 4.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004937 435.0
YYD2_k127_4584086_1 Pyridoxal-phosphate dependent enzyme K01697,K01738 - 2.5.1.47,4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 389.0
YYD2_k127_4592662_0 Penicillin-binding protein 2 K05515 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0071972,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007406 478.0
YYD2_k127_4592662_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 347.0
YYD2_k127_4592662_2 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02768,K02769,K02770,K02806 - 2.7.1.202 0.00000000000000000000000000000000000000000000000000000001412 203.0
YYD2_k127_4592662_3 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000002819 130.0
YYD2_k127_4592662_4 Belongs to the UPF0434 family K09791 - - 0.0000000000002662 72.0
YYD2_k127_4592662_5 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0007961 44.0
YYD2_k127_4596726_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K02887,K03628 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 7.071e-213 669.0
YYD2_k127_4596726_1 Nucleotidyl transferase K11528 - 2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000001391 226.0
YYD2_k127_4596726_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000007866 164.0
YYD2_k127_4596726_3 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000009102 139.0
YYD2_k127_4596726_4 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K00969,K09710 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006417,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:0090069,GO:0090071,GO:2000112,GO:2000113 2.7.7.18 0.000000000000000000000000000000002465 132.0
YYD2_k127_4596726_5 cellulase activity K01201 - 3.2.1.45 0.00000000000000000004648 103.0
YYD2_k127_4596726_6 nUDIX hydrolase K01515,K08310 - 3.6.1.13,3.6.1.67 0.000000000000000001751 93.0
YYD2_k127_4596726_7 guanyl-nucleotide exchange factor activity K01179,K03929,K09612,K12287,K19701,K19702 GO:0003674,GO:0003824,GO:0004177,GO:0005575,GO:0005623,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0036211,GO:0042597,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.2.1.4,3.4.11.10,3.4.11.24,3.4.11.6 0.00000000000000274 88.0
YYD2_k127_4618159_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 590.0
YYD2_k127_4618159_1 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008697 304.0
YYD2_k127_4618159_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000002836 212.0
YYD2_k127_4618159_3 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990145,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000002594 197.0
YYD2_k127_4618159_4 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000009324 146.0
YYD2_k127_4618159_5 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009986,GO:0030246,GO:0030247,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:2001065 - 0.0000000000000000000000000000000000004703 139.0
YYD2_k127_4618159_6 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000009084 122.0
YYD2_k127_4618159_7 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) K02907 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000001237 81.0
YYD2_k127_4618159_8 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000008185 71.0
YYD2_k127_4618159_9 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000004024 64.0
YYD2_k127_4627029_0 Subtilase family K13276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004417 278.0
YYD2_k127_4627029_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000001376 81.0
YYD2_k127_4639821_0 ABC transporter, ATP-binding protein K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009406 419.0
YYD2_k127_4639821_1 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006473 363.0
YYD2_k127_4639821_2 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000001007 167.0
YYD2_k127_4641239_0 amino acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 557.0
YYD2_k127_4641239_1 Histidine ammonia-lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008969 509.0
YYD2_k127_4641239_2 radicals which are normally produced within the cells and which are toxic to biological systems K04564 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0044237,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000447 300.0
YYD2_k127_4641239_3 EXOIII K02342 - 2.7.7.7 0.0000000000000000000000000000004225 133.0
YYD2_k127_4641239_4 translation initiation factor activity K03699 - - 0.000000000000006439 76.0
YYD2_k127_4641239_5 WYL domain K13573 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.00005867 54.0
YYD2_k127_4684879_0 Malic enzyme, NAD binding domain K00027,K00029,K00625,K13788 GO:0003674,GO:0003824,GO:0004470,GO:0004473,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0055114 1.1.1.38,1.1.1.40,2.3.1.8 6.695e-291 913.0
YYD2_k127_4684879_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 2.405e-205 658.0
YYD2_k127_4684879_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005204 394.0
YYD2_k127_4684879_3 tail specific protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007364 344.0
YYD2_k127_4684879_4 Belongs to the ribulose-phosphate 3-epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000004936 220.0
YYD2_k127_4684879_5 D-gluconate metabolic process K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000003291 208.0
YYD2_k127_4684879_6 Protein of unknown function (DUF2167) - - - 0.00000000000000000000000000000000000000000000000000007008 196.0
YYD2_k127_4684879_7 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000008693 168.0
YYD2_k127_4684879_8 EamA-like transporter family - - - 0.00000000000000000000000000000000000000002724 166.0
YYD2_k127_4702911_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003128 325.0
YYD2_k127_4702911_1 Lipid kinase, YegS Rv2252 BmrU family - - - 0.000000000000000000000000001305 125.0
YYD2_k127_4702911_2 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000003544 113.0
YYD2_k127_4702911_3 Phosphoenolpyruvate synthase K01007 - 2.7.9.2 0.000000000002877 68.0
YYD2_k127_4711434_0 PFAM HI0933-like protein K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 288.0
YYD2_k127_4711434_1 KR domain K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000003292 217.0
YYD2_k127_4724687_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 5.285e-225 716.0
YYD2_k127_4724687_1 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 306.0
YYD2_k127_4724687_2 Plays a role in the flagellum-specific transport system K02419 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008016 293.0
YYD2_k127_4724687_3 Role in flagellar biosynthesis K02421 - - 0.000000000000000000000000000000000000000001332 166.0
YYD2_k127_4724687_4 Role in flagellar biosynthesis K02420 - - 0.000000000000000000000002283 105.0
YYD2_k127_4724687_5 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family K04562 - - 0.000000000000000000001593 106.0
YYD2_k127_4724687_6 Flagellar biosynthetic protein FlhF K02404 - - 0.00000000000000007112 93.0
YYD2_k127_4724687_7 flagellar K02418 - - 0.00001378 50.0
YYD2_k127_4729470_0 PFAM peptidase M24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 337.0
YYD2_k127_4729470_1 Belongs to the citrate synthase family K01647,K15234 - 2.3.3.1,4.1.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000001755 263.0
YYD2_k127_4729470_2 Thrombospondin type 3 repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000005266 241.0
YYD2_k127_4729470_3 Histidine kinase K14986 - 2.7.13.3 0.00000000000000000000002576 103.0
YYD2_k127_4731766_0 UbiA prenyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004001 265.0
YYD2_k127_4731766_1 eight transmembrane protein EpsH - - - 0.000000000000000000000000000000000000000000000000000002339 202.0
YYD2_k127_4731766_2 SCO1/SenC K07152,K08976 - - 0.00000000000000000000000000000000000000000000001468 183.0
YYD2_k127_4731766_3 membrane K07152,K08976 - - 0.000000000000000000000000000000000000000004447 158.0
YYD2_k127_4731766_4 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000002071 121.0
YYD2_k127_4731766_5 BFD-like [2Fe-2S] binding domain - - - 0.0000000000000000001147 90.0
YYD2_k127_4731766_6 - - - - 0.000000000000001997 82.0
YYD2_k127_4734818_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K16881 - 2.7.7.13,5.4.2.8 1.668e-242 775.0
YYD2_k127_4734818_1 class II (D K and N) K01893 - 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000002016 233.0
YYD2_k127_4734818_2 conserved protein, possibly involved in methylthioadenosine recycling - - - 0.000000000000000000000000000000000004229 148.0
YYD2_k127_4734818_3 membrane transporter protein K07090 - - 0.0000000000000000001623 98.0
YYD2_k127_4742718_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003871,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0030312,GO:0032259,GO:0034641,GO:0035999,GO:0036211,GO:0040007,GO:0042084,GO:0042085,GO:0042558,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0050667,GO:0051186,GO:0071704,GO:0071944,GO:0140096,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 472.0
YYD2_k127_4742718_1 Methylenetetrahydrofolate reductase K00297,K00547,K00548 - 1.5.1.20,2.1.1.10,2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004357 277.0
YYD2_k127_4742718_2 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000006788 225.0
YYD2_k127_4742718_3 PFAM Hydantoinase B oxoprolinase K01474 - 3.5.2.14 0.000000000000000009299 84.0
YYD2_k127_4755578_0 transferase activity, transferring glycosyl groups K18785 - 2.4.1.319,2.4.1.320 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005558 363.0
YYD2_k127_4755578_1 Carbohydrate family 9 binding domain-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000009712 234.0
YYD2_k127_4755578_2 Carbamoyl-phosphate synthetase large chain domain protein K01955 - 6.3.5.5 0.000000000000000000001114 96.0
YYD2_k127_4790545_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 400.0
YYD2_k127_4790545_1 Protein of unknown function (DUF1385) K09153 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 305.0
YYD2_k127_4790545_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000236 244.0
YYD2_k127_4790545_3 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.000000000000000000000000000000000000000000000000004137 193.0
YYD2_k127_4790545_4 Binds the 23S rRNA K02909 - - 0.00000000000000000000005389 100.0
YYD2_k127_4790545_5 - - - - 0.0000000000000001301 91.0
YYD2_k127_4790545_6 Sporulation protein YtfJ (Spore_YtfJ) - - - 0.000000000000003463 81.0
YYD2_k127_4808095_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 9.712e-227 731.0
YYD2_k127_4808095_1 PcrB family K07094 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000005071 250.0
YYD2_k127_4808095_2 regulator, PATAN and FRGAF domain-containing - - - 0.00000000000003113 79.0
YYD2_k127_4808095_3 Regulatory protein RecX K03565 - - 0.0002469 51.0
YYD2_k127_4808237_0 alginic acid biosynthetic process - - - 0.000004813 59.0
YYD2_k127_4813447_0 Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum K13626 - - 0.0000000000000000000000000291 113.0
YYD2_k127_4813447_1 Belongs to the bacterial flagellin family K02397 GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.0000000000000001292 93.0
YYD2_k127_4846891_0 ABC transporter K11709,K19976 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000658 310.0
YYD2_k127_4846891_1 ABC 3 transport family K11708 - - 0.0000000000000000000000000000000000000000000000000000000000002013 220.0
YYD2_k127_4846891_2 Activates the tRNA-splicing ligase complex by facilitating the enzymatic turnover of catalytic subunit RtcB. Acts by promoting the guanylylation of RtcB, a key intermediate step in tRNA ligation. Can also alter the NTP specificity of RtcB such that ATP, dGTP or ITP is used efficiently - GO:0000394,GO:0003674,GO:0005488,GO:0005509,GO:0006139,GO:0006388,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000000000000003879 109.0
YYD2_k127_4846891_3 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000000000000215 87.0
YYD2_k127_4881474_0 TIGRFAM methylmalonyl-CoA mutase N-terminal domain K01848 - 5.4.99.2 1.369e-237 746.0
YYD2_k127_4881474_1 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family K13687 - - 0.000000000000000000000000000000000000000000000002147 180.0
YYD2_k127_4881791_0 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 553.0
YYD2_k127_4881791_1 oxidative phosphorylation K00426 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0016682,GO:0019646,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:1901363 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 479.0
YYD2_k127_4881791_2 Surface antigen K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004401 411.0
YYD2_k127_4881791_3 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000002547 60.0
YYD2_k127_4903064_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 368.0
YYD2_k127_4903064_1 Belongs to the Fur family K03711 - - 0.0000000000000000000000000008393 117.0
YYD2_k127_4903064_2 nucleotide catabolic process K05996 - 3.4.17.18 0.00000000000000000008864 104.0
YYD2_k127_4903064_3 COG1918 Fe2 transport system protein A K04758 - - 0.00000000001004 67.0
YYD2_k127_4903064_4 Dihaem cytochrome c - - - 0.00005823 51.0
YYD2_k127_4909464_0 Histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000001634 220.0
YYD2_k127_4909464_1 cellulase activity K01081,K01179,K06931 - 3.1.3.5,3.2.1.4 0.0000003273 61.0
YYD2_k127_4909464_2 when overproduced it confers drug-resistance K02477,K07705 GO:0000156,GO:0000160,GO:0003674,GO:0006355,GO:0007154,GO:0007165,GO:0008150,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0023052,GO:0031323,GO:0031326,GO:0035556,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0060089,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.00004682 47.0
YYD2_k127_4926970_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338,K08675 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007638 335.0
YYD2_k127_4926970_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 301.0
YYD2_k127_4946101_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009536,GO:0040007,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 2.4.2.14 1.078e-197 629.0
YYD2_k127_4946101_1 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 577.0
YYD2_k127_4946101_2 Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.000000000000000000000000000000000000000000000000000000000000000007336 229.0
YYD2_k127_4946101_3 Histidine kinase K02482 - 2.7.13.3 0.0000001023 62.0
YYD2_k127_4978458_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 542.0
YYD2_k127_4978458_1 Glycosyltransferase family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 303.0
YYD2_k127_4978458_2 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000009384 230.0
YYD2_k127_4978458_3 Hemerythrin HHE cation binding domain - - - 0.0000000000001192 79.0
YYD2_k127_4983987_0 Ribosomal protein S1 K02945,K03527,K12132 GO:0005575,GO:0005576,GO:0018995,GO:0020003,GO:0030430,GO:0033643,GO:0033646,GO:0033655,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0065010 1.17.7.4,2.7.11.1 8.75e-230 732.0
YYD2_k127_4983987_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002382 246.0
YYD2_k127_4983987_2 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000001543 217.0
YYD2_k127_4983987_3 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000562 150.0
YYD2_k127_4983987_4 - - - - 0.0000000000000297 80.0
YYD2_k127_4999491_0 SPTR Peptidase S8 and S53 subtilisin kexin sedolisin K01113,K14645,K17713 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000008508 244.0
YYD2_k127_5002242_0 Involved in the TonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000005886 251.0
YYD2_k127_5002242_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.0000000000000000000000000000000000000000000000000000002751 199.0
YYD2_k127_5002242_2 MotA/TolQ/ExbB proton channel family K03561,K03562 - - 0.00000000000000000000000000000000000000000000518 172.0
YYD2_k127_5002242_3 PFAM OmpA MotB domain protein K03640 - - 0.0000000000000000000000000000000000003933 146.0
YYD2_k127_5002242_4 Biopolymer transport protein K03559,K03560 - - 0.00000000000000000000009953 102.0
YYD2_k127_5002242_5 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000001552 86.0
YYD2_k127_5002242_6 Evidence 4 Homologs of previously reported genes of - - - 0.00000003669 55.0
YYD2_k127_5002242_7 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000002761 60.0
YYD2_k127_5015640_0 Glycosyl hydrolase family 47 K01230,K10085 - 3.2.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 535.0
YYD2_k127_5015640_1 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007892 351.0
YYD2_k127_5015640_2 PFAM DAHP synthetase I KDSA K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 310.0
YYD2_k127_5015640_3 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000000000004463 224.0
YYD2_k127_5015640_4 Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis K06208 - 5.4.99.5 0.00000000000000000000000000000000000005406 147.0
YYD2_k127_5016272_0 PFAM NADH flavin oxidoreductase NADH oxidase K00317 - 1.5.8.1,1.5.8.2 0.00000000000000000000000000000000000000000000000000000000000000000000000004363 263.0
YYD2_k127_5016272_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000009777 133.0
YYD2_k127_5016272_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000008751 68.0
YYD2_k127_5016272_3 Two component regulator propeller - - - 0.00002413 57.0
YYD2_k127_5048309_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002289 428.0
YYD2_k127_5048309_1 Ferredoxin--NADP reductase K21567 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 370.0
YYD2_k127_5048309_2 Redoxin - - - 0.000000000000000000000000000000000000000000005162 168.0
YYD2_k127_5048309_3 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000007569 123.0
YYD2_k127_5048309_4 Rubrerythrin - - - 0.0000000008054 63.0
YYD2_k127_5048309_5 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000002782 59.0
YYD2_k127_5054386_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 2.824e-208 677.0
YYD2_k127_5054386_1 peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 327.0
YYD2_k127_5054386_2 Nitroreductase family K10678,K19286 - 1.5.1.39 0.0000000000000000000000000000000000001203 153.0
YYD2_k127_5054386_3 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000001102 83.0
YYD2_k127_5081768_0 Domain of unknown function (DUF5117) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 541.0
YYD2_k127_5081768_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000004138 227.0
YYD2_k127_5081768_2 cellulose binding - - - 0.0000002636 56.0
YYD2_k127_5103372_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 7.983e-215 678.0
YYD2_k127_5103372_1 Glyoxalase-like domain K05606 GO:0003674,GO:0003824,GO:0004493,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016853,GO:0016854,GO:0019637,GO:0019693,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046491,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 5.1.99.1 0.000000000000000000000000000000000008802 143.0
YYD2_k127_5103372_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. K08968 - 1.8.4.14 0.00000000000000000000000000000000009618 139.0
YYD2_k127_5103372_3 Acetyl propionyl-CoA carboxylase alpha subunit K01960 - 6.4.1.1 0.00000000000000000005445 97.0
YYD2_k127_5103372_4 Penicillinase repressor - - - 0.00000000000007715 75.0
YYD2_k127_5103372_5 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.000000000006926 68.0
YYD2_k127_5103372_6 - - - - 0.0002332 50.0
YYD2_k127_5103372_7 PspC domain - - - 0.0003676 45.0
YYD2_k127_5117269_0 Glycosyltransferase family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004438 304.0
YYD2_k127_5117269_1 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.00000000000000000000000000000000000000000000000000000000000000166 229.0
YYD2_k127_5117269_2 Glycosyl transferases group 1 K13057 - 2.4.1.245 0.000000000000000000000000000000000000000000000000000001797 194.0
YYD2_k127_5128248_0 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 420.0
YYD2_k127_5128248_1 Hexapeptide repeat of succinyl-transferase K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009136 282.0
YYD2_k127_5128248_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 GO:0000270,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0006810,GO:0006869,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0010876,GO:0015647,GO:0015648,GO:0015835,GO:0015836,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0030203,GO:0031224,GO:0031226,GO:0033036,GO:0034204,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0061024,GO:0065007,GO:0065008,GO:0070589,GO:0071554,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0097035,GO:1901135,GO:1901137,GO:1901264,GO:1901505,GO:1901564,GO:1901566,GO:1901576 - 0.00004244 54.0
YYD2_k127_5141268_0 phosphorelay signal transduction system K02584,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000325 430.0
YYD2_k127_5141268_1 PFAM CBS domain containing protein K06189 - - 0.000000000000000000000000000000000000000000000000000000000000446 220.0
YYD2_k127_5144975_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 319.0
YYD2_k127_5144975_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000001313 205.0
YYD2_k127_5156827_0 Exopolysaccharide biosynthesis protein YbjH - - - 0.0000000000000000000000000000000000000000000000000000000005161 212.0
YYD2_k127_5156827_1 creatininase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000000001154 203.0
YYD2_k127_5156827_3 Amino-transferase class IV K02619 - 4.1.3.38 0.00000000000000000000009624 105.0
YYD2_k127_5156827_4 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.00000000002576 74.0
YYD2_k127_5156827_5 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0001348 45.0
YYD2_k127_5162535_0 Belongs to the helicase family. UvrD subfamily K10742 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004808 284.0
YYD2_k127_5162535_1 - - - - 0.00000000000000000000000000000000000000000000000000005447 195.0
YYD2_k127_5162535_2 WYL domain - - - 0.00000000000000000000000000006836 128.0
YYD2_k127_5164301_0 Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000391 589.0
YYD2_k127_5164301_1 Nucleotidyl transferase K00978 - 2.7.7.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 403.0
YYD2_k127_5164301_2 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005107 260.0
YYD2_k127_5164301_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000003998 232.0
YYD2_k127_5164301_4 Domain of unknown function (DUF2172) - - - 0.00000000000000000000000002258 110.0
YYD2_k127_5209711_0 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008741 512.0
YYD2_k127_5209711_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 340.0
YYD2_k127_5209711_2 calcium, potassium:sodium antiporter activity K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004743 297.0
YYD2_k127_5209711_3 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000000001041 193.0
YYD2_k127_5209711_4 phosphoenolpyruvate-dependent sugar phosphotransferase system K02768,K02769,K02770,K02806 - 2.7.1.202 0.0000000000000000000000000000001187 135.0
YYD2_k127_5209711_5 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.00000001861 60.0
YYD2_k127_5234253_0 carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 1.134e-218 685.0
YYD2_k127_5234253_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007662 263.0
YYD2_k127_5234253_2 Dehydrogenase K00248 - 1.3.8.1 0.000000000000000001406 85.0
YYD2_k127_5238328_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 343.0
YYD2_k127_5238328_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K03074,K12257 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000009112 252.0
YYD2_k127_5262552_0 Chaperone of endosialidase - - - 0.0000000000000000003999 89.0
YYD2_k127_5262552_1 Putative helix-turn-helix protein, YlxM / p13 like - - - 0.000000000000000002126 88.0
YYD2_k127_5262552_2 Tetratricopeptide repeat - - - 0.00003753 54.0
YYD2_k127_5269875_0 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000002556 185.0
YYD2_k127_5269875_1 PFAM short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000002726 173.0
YYD2_k127_5269875_2 PFAM 6-pyruvoyl tetrahydropterin synthase and K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000005084 134.0
YYD2_k127_5270818_0 TGS domain K06944 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000528 281.0
YYD2_k127_5270818_1 - - - - 0.00000000000000000000000000000000000000000000000000006241 202.0
YYD2_k127_5270818_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000001467 142.0
YYD2_k127_5274345_0 PFAM band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 343.0
YYD2_k127_5274345_1 Nodulation protein S (NodS) - - - 0.0000000000000000000000000000000002241 141.0
YYD2_k127_5274345_2 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0000000000006733 75.0
YYD2_k127_5274345_3 TIGRFAM regulatory protein, FmdB family - - - 0.000000000001182 70.0
YYD2_k127_5274345_4 cellular response to DNA damage stimulus K07340 - - 0.0000000299 62.0
YYD2_k127_5274345_5 Protein of unknown function, DUF255 K06888 - - 0.0003436 51.0
YYD2_k127_5300934_0 AAA ATPase K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 491.0
YYD2_k127_5300934_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008707 411.0
YYD2_k127_5300934_2 Peptidase family M48 K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 321.0
YYD2_k127_5300934_3 CBS domain containing protein K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007748 291.0
YYD2_k127_5300934_4 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.000000000000000000000000000000000000000000000000000000000001491 235.0
YYD2_k127_5300934_5 Parallel beta-helix repeats - - - 0.00000000000000000000000001396 123.0
YYD2_k127_531729_0 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000001732 221.0
YYD2_k127_531729_1 Male sterility protein K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000007772 206.0
YYD2_k127_531729_2 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000005228 182.0
YYD2_k127_5318828_0 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000001553 240.0
YYD2_k127_5318828_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5 0.00000000000000000000000000000000000000000000000000000000007097 211.0
YYD2_k127_5318828_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000725 211.0
YYD2_k127_5318828_3 PAP2 superfamily - - - 0.0000000000000000000000000000000000000000000009571 177.0
YYD2_k127_5330684_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005395 417.0
YYD2_k127_5330684_1 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 327.0
YYD2_k127_5330991_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004404 327.0
YYD2_k127_5330991_1 Uncharacterized protein family (UPF0051) K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000007408 241.0
YYD2_k127_5330991_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000031 111.0
YYD2_k127_5330991_3 PFAM Rieske 2Fe-2S domain protein K00363,K05710 - 1.7.1.15 0.00000000000000000001391 94.0
YYD2_k127_5341585_0 epoxide hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008353 554.0
YYD2_k127_5341585_1 Catalyzes the attachment of glycine to tRNA(Gly) K01880 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046983,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.14 0.00009551 44.0
YYD2_k127_5345637_0 modulates the activities of several proteins which are inactive in their K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004089 264.0
YYD2_k127_5345637_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000001298 143.0
YYD2_k127_5345637_2 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000001013 131.0
YYD2_k127_5360321_0 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002298 258.0
YYD2_k127_5360321_1 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000004165 212.0
YYD2_k127_5360321_2 DsrC like protein K11179 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000001178 164.0
YYD2_k127_5360321_3 ASPIC and UnbV - - - 0.000000000000000000000000009988 119.0
YYD2_k127_5363912_0 Belongs to the peptidase S8 family - - - 0.0000000000000000000001296 111.0
YYD2_k127_5363912_1 protein maturation K07400,K13628 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010106,GO:0010467,GO:0015976,GO:0016043,GO:0016226,GO:0019538,GO:0019725,GO:0022607,GO:0030003,GO:0031163,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042592,GO:0042594,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0050896,GO:0051186,GO:0051536,GO:0051539,GO:0051540,GO:0051604,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071496,GO:0071704,GO:0071840,GO:0097428,GO:0098771,GO:1901564 - 0.000007298 50.0
YYD2_k127_5379618_0 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005617 422.0
YYD2_k127_5379618_1 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000003708 119.0
YYD2_k127_5389327_0 Bacitracin resistance protein BacA K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000446 220.0
YYD2_k127_5389327_1 D,D-heptose 1,7-bisphosphate phosphatase K02841,K02843,K02849,K03271,K03272,K03273 - 2.7.1.167,2.7.7.70,3.1.3.82,3.1.3.83,5.3.1.28 0.00000000000000000000000000000000000000000000000000000002569 215.0
YYD2_k127_5389327_3 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547,K05970 - 3.1.1.53 0.000000003931 61.0
YYD2_k127_5392746_0 serine-type endopeptidase activity K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008076 388.0
YYD2_k127_5392746_1 Bacterial flagellin C-terminal helical region K02406 - - 0.00000000000009652 81.0
YYD2_k127_5403630_0 Histidine kinase K13598 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000386 201.0
YYD2_k127_5403630_1 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.0000000000000000000000000000000004601 138.0
YYD2_k127_5427286_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 GO:0001505,GO:0003674,GO:0003824,GO:0004372,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006545,GO:0006546,GO:0006563,GO:0006565,GO:0006730,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009069,GO:0009070,GO:0009071,GO:0009987,GO:0016053,GO:0016054,GO:0016740,GO:0016741,GO:0016742,GO:0017144,GO:0019264,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042133,GO:0042135,GO:0042136,GO:0042737,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046395,GO:0046872,GO:0046914,GO:0048037,GO:0050662,GO:0065007,GO:0065008,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.1.2.1 8.046e-201 632.0
YYD2_k127_5427286_1 Steryl acetyl hydrolase K14731 - 3.1.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003851 327.0
YYD2_k127_5427286_2 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.00000000000000000000000009389 110.0
YYD2_k127_5427286_3 TIGRFAM Protein of - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000001558 104.0
YYD2_k127_5427286_4 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008144,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000001192 74.0
YYD2_k127_5427286_5 regulation of mitotic cell cycle - - - 0.0000000004412 70.0
YYD2_k127_5427286_6 Belongs to the ompA family K03286 - - 0.0000001339 60.0
YYD2_k127_5428201_0 HDOD domain - - - 0.00000000000000000000000000000000000002884 151.0
YYD2_k127_5428201_1 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.0000000000000000000000000000000001702 145.0
YYD2_k127_5428201_2 Flagellar protein FliS K02422 - - 0.000000000000006032 80.0
YYD2_k127_5468027_0 TIGRFAM The (Largely Gram-negative Bacterial) Hydrophobe Amphiphile Efflux-1 (HAE1) Family K03296,K18138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006041 514.0
YYD2_k127_5468027_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003092 276.0
YYD2_k127_5479957_0 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 314.0
YYD2_k127_5479957_1 Gaf domain - - - 0.0006047 52.0
YYD2_k127_5485473_0 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000001408 233.0
YYD2_k127_5485473_1 metal-dependent phosphohydrolase HD region - - - 0.00000000000000000000000000000000004004 138.0
YYD2_k127_5485473_2 blue (type 1) copper K00368 - 1.7.2.1 0.000000002117 72.0
YYD2_k127_5490821_0 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 408.0
YYD2_k127_5490821_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000297 261.0
YYD2_k127_5490821_2 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000000000000000000000000000000000008218 171.0
YYD2_k127_556243_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001618 258.0
YYD2_k127_556243_1 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000008657 249.0
YYD2_k127_556243_2 PFAM Polysaccharide deacetylase - - - 0.000000000000000000000000000006901 128.0
YYD2_k127_5562504_0 Evidence 5 No homology to any previously reported sequences K17713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 527.0
YYD2_k127_5562504_1 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000103 166.0
YYD2_k127_5562504_2 - - - - 0.0000001569 59.0
YYD2_k127_5563713_0 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004651 449.0
YYD2_k127_5563713_1 Peptidase M16 inactive domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004288 398.0
YYD2_k127_5563713_2 Domain of unknown function (DUF3520) K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007748 300.0
YYD2_k127_5570620_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030312,GO:0030554,GO:0031333,GO:0031597,GO:0032271,GO:0032272,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043254,GO:0043335,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0051704,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005455 508.0
YYD2_k127_5570620_1 Belongs to the N(4) N(6)-methyltransferase family K00571 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 393.0
YYD2_k127_5570620_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004203 296.0
YYD2_k127_5570620_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001475 278.0
YYD2_k127_5571523_0 FeS assembly protein SufB K07033,K09014 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0034641,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:1901360 - 3.167e-227 711.0
YYD2_k127_5571523_1 Iron ABC transporter ATP-binding protein K09013 - - 0.000000000000000000003896 93.0
YYD2_k127_5571523_2 TIGRFAM FeS assembly protein SufD K09015 - - 0.000001477 56.0
YYD2_k127_5617796_0 COGs COG1629 Outer membrane receptor protein mostly Fe transport - - - 3.896e-233 762.0
YYD2_k127_5617796_1 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 312.0
YYD2_k127_5617796_2 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000000000000005035 103.0
YYD2_k127_5617796_3 aminopeptidase N - - - 0.00000000000000000000001608 117.0
YYD2_k127_5617796_4 Biotin/lipoate A/B protein ligase family K03800 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 6.3.1.20 0.000000000000000000004706 104.0
YYD2_k127_5617796_5 repeat-containing protein - - - 0.00001254 55.0
YYD2_k127_5625876_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 2.302e-216 693.0
YYD2_k127_5625876_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 GO:0003674,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090304,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 410.0
YYD2_k127_5625876_2 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004439 346.0
YYD2_k127_5625876_3 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 330.0
YYD2_k127_5625876_4 Glycosyl transferase family 2 K12984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004035 263.0
YYD2_k127_5625876_5 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00000000000000000000000000000000000000000000000000000000001515 221.0
YYD2_k127_5625876_6 Glycosyl transferase 4-like - - - 0.0000000000000000000000003884 114.0
YYD2_k127_5625876_7 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02849,K12982 - - 0.0000000000000000000004727 109.0
YYD2_k127_5634884_0 helicase superfamily c-terminal domain K03726 - - 0.00000000000000000000000000000000000000000000000000000000003279 218.0
YYD2_k127_5634884_2 domain protein - - - 0.000000000000196 79.0
YYD2_k127_5636670_0 Nickel-dependent hydrogenase K00436 - 1.12.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 582.0
YYD2_k127_5636670_1 coenzyme F420 hydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 415.0
YYD2_k127_5636670_2 Hydrogenase maturation protease - - - 0.00000000000000000000000000005385 120.0
YYD2_k127_5649930_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 444.0
YYD2_k127_5649930_1 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000159 166.0
YYD2_k127_5649930_2 nuclear chromosome segregation - - - 0.000000000000006703 78.0
YYD2_k127_5660698_0 EVE domain - - - 0.00000000000000000000000000000000000000000000000001813 184.0
YYD2_k127_5660698_1 COG2931 RTX toxins and related Ca2 -binding - - - 0.0000000000000000000000000000003299 143.0
YYD2_k127_5660698_2 cellulose binding - - - 0.00000000000000000001787 108.0
YYD2_k127_5660698_3 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000001046 73.0
YYD2_k127_566146_0 FeS-containing Cyanobacterial-specific oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 329.0
YYD2_k127_566146_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003383 254.0
YYD2_k127_566146_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009314,GO:0009628,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.00000000000000000000000000000000000000000000000000000000111 211.0
YYD2_k127_566146_3 Protein of unknown function (DUF4242) - - - 0.0000000000000000000000000000000000164 138.0
YYD2_k127_5668306_0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 420.0
YYD2_k127_5668306_1 response regulator receiver K02481,K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004155 410.0
YYD2_k127_5675697_0 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003549 334.0
YYD2_k127_5675697_1 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family K13687 - - 0.000000000000000000000000000000000002428 147.0
YYD2_k127_5675697_2 ABC transporter, ATP-binding protein - - - 0.0000000000000000000000000000000000236 138.0
YYD2_k127_5675697_3 Belongs to the ompA family K03286 GO:0000746,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006950,GO:0006974,GO:0008150,GO:0009279,GO:0009597,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0015267,GO:0015288,GO:0016020,GO:0016021,GO:0016032,GO:0019058,GO:0019867,GO:0022803,GO:0022829,GO:0022857,GO:0030260,GO:0030312,GO:0030313,GO:0031224,GO:0031975,GO:0032991,GO:0033554,GO:0034220,GO:0042802,GO:0043207,GO:0044403,GO:0044409,GO:0044419,GO:0044425,GO:0044462,GO:0044464,GO:0044764,GO:0046718,GO:0046930,GO:0050896,GO:0051179,GO:0051234,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051806,GO:0051828,GO:0055085,GO:0071944,GO:0098796 - 0.0002795 52.0
YYD2_k127_5682263_0 Glycoside hydrolase family 38 central region K01191 - 3.2.1.24 0.0 1032.0
YYD2_k127_5682263_1 symporter activity K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006232 409.0
YYD2_k127_5682263_2 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 359.0
YYD2_k127_5682263_3 Peptide-N-glycosidase F, N terminal - - - 0.00000000000000000000000000002674 129.0
YYD2_k127_5688073_1 - - - - 0.00000000000000000000000000000000000000000971 167.0
YYD2_k127_5688073_2 - - - - 0.000000000000003027 81.0
YYD2_k127_5688073_3 Cytochrome c - - - 0.000008166 53.0
YYD2_k127_5693102_0 Protein of unknown function (DUF1722) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004514 344.0
YYD2_k127_5693102_1 UV-endonuclease UvdE K13281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 286.0
YYD2_k127_5693102_2 Protein conserved in bacteria K09914 - - 0.00003055 53.0
YYD2_k127_5695795_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 2.961e-279 884.0
YYD2_k127_5695795_1 Von Willebrand factor type A K07114 - - 0.00000000000000000000000000000000000002714 151.0
YYD2_k127_5695795_2 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000003688 124.0
YYD2_k127_570280_0 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009634 369.0
YYD2_k127_570280_1 Glutamate-1-semialdehyde aminotransferase K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 300.0
YYD2_k127_570280_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001498 281.0
YYD2_k127_570280_3 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000003222 177.0
YYD2_k127_570280_5 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.000000000000000000005705 98.0
YYD2_k127_570280_6 synthase K01719 - 4.2.1.75 0.000000000000001273 86.0
YYD2_k127_570280_7 Protein kinase domain - - - 0.00002792 49.0
YYD2_k127_5709230_0 Protein of unknown function (DUF2723) - - - 0.00000000000000000000000000000000000000000000000000000000129 223.0
YYD2_k127_5709230_1 Chaperone of endosialidase - - - 0.0000000000000000000396 103.0
YYD2_k127_571363_0 metal-dependent phosphohydrolase HD region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002259 274.0
YYD2_k127_5715577_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007354 366.0
YYD2_k127_5715577_1 acetyltransferase K00680 - - 0.000000000001182 70.0
YYD2_k127_5715577_2 Propeptide_C25 - - - 0.0000001641 63.0
YYD2_k127_5719605_0 Peptidase family C69 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 477.0
YYD2_k127_5752483_0 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 - 3.4.21.83 0.00000000000000000000000000000000000000000001215 163.0
YYD2_k127_5752483_1 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.00000000000000000000000000000000000009616 153.0
YYD2_k127_5752483_2 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000000000001588 140.0
YYD2_k127_5752483_3 YCII-related domain - - - 0.000000000000000000008414 95.0
YYD2_k127_5752483_4 aldo keto reductase - - - 0.000000000000000002091 85.0
YYD2_k127_5765709_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 394.0
YYD2_k127_5765709_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0002682,GO:0002684,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006950,GO:0008150,GO:0009314,GO:0009380,GO:0009605,GO:0009607,GO:0009628,GO:0016020,GO:0032991,GO:0035821,GO:0042802,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0071944,GO:0075136,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006411 335.0
YYD2_k127_5765709_2 Protein conserved in bacteria - - - 0.0000000000006657 78.0
YYD2_k127_5767692_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1204.0
YYD2_k127_5767692_1 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 300.0
YYD2_k127_5767692_2 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 287.0
YYD2_k127_5767692_3 Hep Hag repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002552 293.0
YYD2_k127_5767692_4 NAD(P)H-binding K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000002836 241.0
YYD2_k127_5767692_5 Psort location CytoplasmicMembrane, score K16788 - - 0.0000000000000000000000000000000001741 138.0
YYD2_k127_5767692_6 PFAM methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000003447 139.0
YYD2_k127_5767692_7 PFAM NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.00000000000000003565 90.0
YYD2_k127_5767692_8 YEATS family - - - 0.0004311 48.0
YYD2_k127_5777191_0 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006282 492.0
YYD2_k127_5777191_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008138 423.0
YYD2_k127_5777191_2 Belongs to the FPP GGPP synthase family K00805,K02523 GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009108,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0042180,GO:0042181,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901615,GO:1901617,GO:1901661,GO:1901663 2.5.1.30,2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009759 299.0
YYD2_k127_5777191_3 COG1073 Hydrolases of the alpha beta superfamily K06889 - - 0.0003688 44.0
YYD2_k127_5785411_0 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002129 280.0
YYD2_k127_5785411_2 Protein of unknown function (DUF1566) - - - 0.0002148 51.0
YYD2_k127_580340_0 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 290.0
YYD2_k127_580340_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K02504,K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004414 278.0
YYD2_k127_580340_2 Roadblock/LC7 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000215 224.0
YYD2_k127_580340_3 Roadblock/LC7 domain K07131 - - 0.0000000000000000000000000000000000005831 143.0
YYD2_k127_5815174_0 Aminotransferase class-V K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 447.0
YYD2_k127_5815174_1 Protein of unknown function (DUF1015) K00262 - 1.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 433.0
YYD2_k127_5815174_2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 314.0
YYD2_k127_5815174_3 ABC transporter, ATP-binding protein K02003 - - 0.0000000000003174 70.0
YYD2_k127_5825139_0 Chalcone and stilbene synthases, N-terminal domain K16167 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 365.0
YYD2_k127_5825139_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000003905 183.0
YYD2_k127_5825139_2 - - - - 0.0000000000000000000000000000000000001006 156.0
YYD2_k127_5827324_0 Catalyzes the synthesis of GMP from XMP K01951,K03790 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.3.1.128,6.3.5.2 1.9e-205 652.0
YYD2_k127_5827324_1 Serine aminopeptidase, S33 K06889 - - 0.000000000000000000000000000000000000000000000000111 183.0
YYD2_k127_5827324_2 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000001942 63.0
YYD2_k127_5830952_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 3.08e-200 638.0
YYD2_k127_5830952_1 tRNA-splicing ligase that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs K14415 GO:0000166,GO:0000394,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003972,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0008452,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016886,GO:0017076,GO:0019001,GO:0019002,GO:0030145,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 608.0
YYD2_k127_5830952_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000003162 171.0
YYD2_k127_5830952_3 - - - - 0.0000000000000000000298 103.0
YYD2_k127_5830952_4 Protein of unknown function (DUF2892) - - - 0.00000000000004479 74.0
YYD2_k127_5830952_5 PFAM Uncharacterised BCR, COG1649 - - - 0.00001206 47.0
YYD2_k127_5849095_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0000988,GO:0000989,GO:0003674,GO:0003756,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006457,GO:0006458,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010556,GO:0015035,GO:0015036,GO:0016020,GO:0016032,GO:0016043,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0016989,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031326,GO:0032991,GO:0034641,GO:0034645,GO:0042026,GO:0043167,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051704,GO:0055114,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0140096,GO:0140110,GO:1901360,GO:1901576,GO:1903506,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 437.0
YYD2_k127_5849095_1 Heat shock 70 kDa protein K04043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004499 392.0
YYD2_k127_5849095_2 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000002036 233.0
YYD2_k127_5849095_3 Signal transduction histidine kinase, nitrogen specific, NtrB K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000003382 237.0
YYD2_k127_5849095_4 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 0.000000000000000000000000000000000000001998 156.0
YYD2_k127_5849095_5 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000000000000003532 146.0
YYD2_k127_5849095_6 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0002416 44.0
YYD2_k127_5858130_0 PFAM DAHP synthetase I KDSA K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 387.0
YYD2_k127_5858130_1 PFAM aminotransferase, class I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009032 378.0
YYD2_k127_5858130_2 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 305.0
YYD2_k127_5858130_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001849 276.0
YYD2_k127_5858130_4 PFAM Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000002336 153.0
YYD2_k127_5862874_0 Cytochrome c554 and c-prime K03620 - - 0.000000000000000000000000000000000000000000001837 172.0
YYD2_k127_5862874_1 DNA mediated transformation K04096 - - 0.00000000000000000000000000000000000000007255 169.0
YYD2_k127_5862874_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000001025 124.0
YYD2_k127_5862874_3 TIR domain - - - 0.000000000000000000000003964 119.0
YYD2_k127_5868493_0 receptor K16092 - - 0.000000000000000000002359 108.0
YYD2_k127_58686_0 phosphorelay signal transduction system K07315 - 3.1.3.3 0.00000000000000000000000004205 111.0
YYD2_k127_58686_1 PFAM response regulator receiver K03413 - - 0.00000000000001639 78.0
YYD2_k127_58686_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000003075 70.0
YYD2_k127_587063_0 PFAM Enoyl-CoA hydratase isomerase K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000012 241.0
YYD2_k127_587063_1 membrane organization K21449 - - 0.00000000000000000000000000000000000000000001293 179.0
YYD2_k127_587072_0 tRNA synthetases class I (W and Y) K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009117 396.0
YYD2_k127_587072_1 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000008529 237.0
YYD2_k127_587072_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000000000000000000000000002399 206.0
YYD2_k127_587072_3 Belongs to the pseudouridine synthase RsuA family K06178,K06182 - 5.4.99.21,5.4.99.22 0.000000000000000000000000000000000000000000000000000001256 198.0
YYD2_k127_587072_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000000000000000006374 179.0
YYD2_k127_5881831_0 Sigma-54 interaction domain K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000365 256.0
YYD2_k127_5881831_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000004158 211.0
YYD2_k127_5881831_3 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000000000004255 105.0
YYD2_k127_5903843_0 CorA-like Mg2+ transporter protein K03284 - - 0.000000000000000000000000000000000000000000000000000000000000005924 224.0
YYD2_k127_5903843_1 HhH-GPD family K03575 - - 0.00000000000000000000000000000000000000000000000000000000000001859 224.0
YYD2_k127_5903843_2 PFAM O-Antigen - - - 0.000001267 59.0
YYD2_k127_5903843_3 Protein kinase domain K12132 - 2.7.11.1 0.000005617 53.0
YYD2_k127_59378_0 protein transport across the cell outer membrane K02453,K03219 - - 0.0000000000000000000000000000001799 134.0
YYD2_k127_59378_1 Rhodanese Homology Domain - - - 0.000000000000000000000279 102.0
YYD2_k127_59378_2 DoxX - - - 0.00000000000000000002127 98.0
YYD2_k127_59378_3 transporter K07238,K11021,K16267 - - 0.000001053 54.0
YYD2_k127_5941313_0 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.000004054 60.0
YYD2_k127_5964341_0 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 347.0
YYD2_k127_5964341_1 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002855 243.0
YYD2_k127_5964341_2 Conserved repeat domain - - - 0.0000000000000000000000000000000004562 151.0
YYD2_k127_5964341_3 - - - - 0.000000000000000000000000005559 117.0
YYD2_k127_5964341_4 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 0.0000000000000000000000001128 115.0
YYD2_k127_5964341_5 lactoylglutathione lyase activity - - - 0.00000000000000001499 87.0
YYD2_k127_5964341_6 guanyl-nucleotide exchange factor activity - - - 0.00000000000006932 85.0
YYD2_k127_5964341_7 Outer membrane protein beta-barrel domain - - - 0.000000000009348 72.0
YYD2_k127_5974843_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 1.68e-236 739.0
YYD2_k127_5974843_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 6.62e-229 716.0
YYD2_k127_5974843_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006912 311.0
YYD2_k127_5974843_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000001035 248.0
YYD2_k127_5974843_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000006764 223.0
YYD2_k127_5974843_5 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000004136 123.0
YYD2_k127_5974843_6 Uncharacterized ACR, COG1399 K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000001595 112.0
YYD2_k127_5974843_7 Ribosomal L32p protein family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.0000000000000000000002562 97.0
YYD2_k127_5997215_0 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007228 314.0
YYD2_k127_5997215_1 - - - - 0.0000000000000000000000000000000000000008124 158.0
YYD2_k127_5997215_2 - - - - 0.00000001133 61.0
YYD2_k127_6006604_0 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 344.0
YYD2_k127_6006604_1 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008014 294.0
YYD2_k127_6006604_2 Protein of unknown function (DUF1579) - - - 0.00000000004596 69.0
YYD2_k127_6006604_3 FR47-like protein - - - 0.000009184 55.0
YYD2_k127_6012977_0 maltose binding K02027,K17329 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 357.0
YYD2_k127_6012977_1 binding-protein-dependent transport systems inner membrane component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 301.0
YYD2_k127_6012977_2 binding-protein-dependent transport systems inner membrane component K02025,K15771 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003841 294.0
YYD2_k127_6012977_3 Mechanosensitive ion channel K05802,K16052,K22051 - - 0.0000000000000000000000000000000000000000000000000000000000000000113 239.0
YYD2_k127_6012977_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000003165 227.0
YYD2_k127_6012977_5 - - - - 0.0000000000000000003843 94.0
YYD2_k127_6012977_6 Belongs to the ompA family - - - 0.00000000000004354 81.0
YYD2_k127_6012977_7 Bacterial Ig-like domain - - - 0.000004853 51.0
YYD2_k127_6057063_0 Two component, sigma54 specific, transcriptional regulator, Fis family K02667,K07713,K07714,K19641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008924 540.0
YYD2_k127_6057063_1 Uncharacterised ArCR, COG2043 - - - 0.0000000000000000000000000000002869 127.0
YYD2_k127_6057063_2 PFAM Glutamine amidotransferase class-I - - - 0.0000000000000000000000000000007363 126.0
YYD2_k127_6060106_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006275 428.0
YYD2_k127_6060106_1 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007154 373.0
YYD2_k127_6060106_2 Ferrochelatase K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000005466 244.0
YYD2_k127_6060106_3 PRC-barrel domain - - - 0.000000000000000000000000000000000000002582 158.0
YYD2_k127_6092723_0 Glycosyltransferase Family 4 - - - 0.0 1194.0
YYD2_k127_6092723_1 beta-1,4-mannooligosaccharide phosphorylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006879 532.0
YYD2_k127_6134725_0 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006258 488.0
YYD2_k127_6134725_1 Two component, sigma54 specific, transcriptional regulator, Fis family K07712,K07713,K07714,K10943 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004088 476.0
YYD2_k127_6134725_10 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000000000000000001265 162.0
YYD2_k127_6134725_11 phosphorelay signal transduction system K03413 - - 0.00000000000000000000000000000000003362 138.0
YYD2_k127_6134725_12 Flagellar basal body rod protein K02388 - - 0.00000000000000000000000000000005066 132.0
YYD2_k127_6134725_13 HD domain - - - 0.000000000000000000000000002578 115.0
YYD2_k127_6134725_14 E-Z type HEAT repeats - - - 0.0000000000000004976 89.0
YYD2_k127_6134725_15 PFAM Flagellar assembly protein FliH K02411 - - 0.00000000000006425 81.0
YYD2_k127_6134725_16 Flagellar hook-basal body K02408 - - 0.000000000001544 71.0
YYD2_k127_6134725_17 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.000000000003531 72.0
YYD2_k127_6134725_18 - - - - 0.00002134 54.0
YYD2_k127_6134725_2 Flagellar protein export ATPase FliI K02412 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007791 444.0
YYD2_k127_6134725_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007848 364.0
YYD2_k127_6134725_4 flagellar motor switch protein FliG K02410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007911 341.0
YYD2_k127_6134725_5 bacterial-type flagellum-dependent cell motility K02409 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006313 330.0
YYD2_k127_6134725_6 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 297.0
YYD2_k127_6134725_7 PFAM MotA TolQ ExbB proton channel K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000221 263.0
YYD2_k127_6134725_8 Signal transduction histidine kinase, nitrogen specific, NtrB K07708,K07710,K10942 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000008155 260.0
YYD2_k127_6134725_9 PFAM OmpA family K02557 - - 0.0000000000000000000000000000000000000000000000000000003141 203.0
YYD2_k127_6159551_0 proteinase inhibitor I4 serpin K13963 - - 0.000000000000000000000000000000000000000000000000000000000000000005998 237.0
YYD2_k127_6159551_1 CcmB protein K02193,K02194 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031224,GO:0031226,GO:0032991,GO:0042623,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.41 0.00000000000000000000000000000000000000000000001728 178.0
YYD2_k127_6164978_0 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 467.0
YYD2_k127_6164978_1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins K03790 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000000000000000002541 225.0
YYD2_k127_6164978_2 - - - - 0.0000000000000000000000000000000000000000000000004067 182.0
YYD2_k127_6164978_3 lyase activity K01387,K03301 - 3.4.24.3 0.00000000000000000000000000000000003927 142.0
YYD2_k127_6164978_4 acetyltransferase - - - 0.0006382 49.0
YYD2_k127_6176240_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008760,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016765,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009045 457.0
YYD2_k127_6176240_1 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.0000000000000000000000000000000000000000000000000000005542 201.0
YYD2_k127_6176240_2 Fumarase C C-terminus K01744 - 4.3.1.1 0.00000000000000000000000000000000008668 141.0
YYD2_k127_6176240_3 Domain of unknown function (DUF4416) - - - 0.000000000000000000000000003502 121.0
YYD2_k127_6176240_4 - - - - 0.0003092 49.0
YYD2_k127_6176785_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 2.86e-239 754.0
YYD2_k127_6176785_1 WD40-like Beta Propeller Repeat K03641 - - 0.00000000001848 75.0
YYD2_k127_6181278_0 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 299.0
YYD2_k127_6181278_1 formate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000004479 237.0
YYD2_k127_6181278_2 formate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000002182 196.0
YYD2_k127_6181278_3 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000002351 81.0
YYD2_k127_6181278_4 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000003939 65.0
YYD2_k127_6181278_5 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000002083 59.0
YYD2_k127_6181318_0 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 285.0
YYD2_k127_6181318_1 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000000000000000000000000000000000000000000000000000000003519 231.0
YYD2_k127_6189422_0 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 7.646e-214 692.0
YYD2_k127_6189422_1 Putative serine dehydratase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004755 318.0
YYD2_k127_6189422_2 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.00000000000000000006358 90.0
YYD2_k127_6189422_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000001022 83.0
YYD2_k127_6191455_0 TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000002353 228.0
YYD2_k127_6191455_1 Flagellar Assembly Protein A K09749 - - 0.00000000000000003537 89.0
YYD2_k127_6191455_2 amine dehydrogenase activity - - - 0.00000000000009749 83.0
YYD2_k127_6191455_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0007604 49.0
YYD2_k127_6195927_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 9.411e-198 627.0
YYD2_k127_6195927_1 NapC/NirT cytochrome c family, N-terminal region K15876 - - 0.00000000000000000000000000000000000000000000000378 178.0
YYD2_k127_6195927_2 Serine phosphatase RsbU regulator of sigma subunit K07315 - 3.1.3.3 0.000000000000000000000000000000000000000002187 169.0
YYD2_k127_6195927_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000006589 151.0
YYD2_k127_6195927_4 FeoA K03709 - - 0.00000000000001273 76.0
YYD2_k127_6196985_0 Carbohydrate family 9 binding domain-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 426.0
YYD2_k127_6196985_1 symporter activity K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000529 228.0
YYD2_k127_6212657_0 Ftsk_gamma K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 582.0
YYD2_k127_6214323_0 Polysulphide reductase, NrfD K00185 - - 8.789e-221 692.0
YYD2_k127_6214323_1 4Fe-4S dicluster domain K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 556.0
YYD2_k127_6214323_2 zinc ion transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007348 425.0
YYD2_k127_6214323_3 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000259 218.0
YYD2_k127_6214323_4 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000000000000000000000004132 187.0
YYD2_k127_6214323_5 - - - - 0.000000000004438 71.0
YYD2_k127_6225131_0 [isocitrate dehydrogenase (NADP+)] phosphatase activity K00906 GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004721,GO:0004722,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008772,GO:0009060,GO:0009987,GO:0015980,GO:0016208,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0016999,GO:0017076,GO:0017144,GO:0018105,GO:0018193,GO:0018209,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0035639,GO:0036094,GO:0036211,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046487,GO:0050790,GO:0055114,GO:0065007,GO:0065009,GO:0070262,GO:0071704,GO:0072350,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 447.0
YYD2_k127_6225131_1 ABC transporter K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 310.0
YYD2_k127_6225131_2 Probably functions as a manganese efflux pump - - - 0.000000000000000000000000000000001633 136.0
YYD2_k127_6225131_3 2 iron, 2 sulfur cluster binding - - - 0.000000000000000000000000000000001987 135.0
YYD2_k127_6227827_0 PFAM type II secretion system protein E K02283,K03609 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 511.0
YYD2_k127_6227827_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 351.0
YYD2_k127_6227827_2 phospholipase K01058 - 3.1.1.32,3.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000121 236.0
YYD2_k127_6227827_3 type II secretion system protein K12510 - - 0.00000000000000000000000000000000000000000000000000009788 198.0
YYD2_k127_6227827_4 PFAM type II secretion system K12511 - - 0.00000000000000000000000000000000000000000000000004726 192.0
YYD2_k127_6227827_5 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family K02282 - - 0.0000000000000000000000000000000000000000001279 173.0
YYD2_k127_6227827_6 Protein of unknown function (DUF1572) - - - 0.000000000000000000000000000000000000000003969 161.0
YYD2_k127_6227827_7 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000000000000000000003749 123.0
YYD2_k127_6276272_0 Endoribonuclease that initiates mRNA decay K18682 - - 1.167e-198 631.0
YYD2_k127_6276272_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 409.0
YYD2_k127_6276272_2 Cell division protein ZapA K09888 - - 0.0000000008333 64.0
YYD2_k127_6325316_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004569 410.0
YYD2_k127_6325316_1 Biotin-lipoyl like K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009398 290.0
YYD2_k127_6325316_2 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000001225 152.0
YYD2_k127_6325316_3 abc transporter atp-binding protein K02021,K06147 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702 - 0.000000000000000000000324 108.0
YYD2_k127_6328212_0 Permease YjgP YjgQ family protein K07091,K11720 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 336.0
YYD2_k127_6328212_1 Metal dependent phosphohydrolases with conserved 'HD' motif. K03698 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002677 252.0
YYD2_k127_6328212_2 Permease, YjgP YjgQ - - - 0.0000000000000000000002556 110.0
YYD2_k127_6328212_3 Recombinase zinc beta ribbon domain - - - 0.0000008032 55.0
YYD2_k127_6328740_0 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 321.0
YYD2_k127_6328740_1 AIR synthase related protein, C-terminal domain K04655 - - 0.000000000000000000000000000000000000000000000000000000000000000724 223.0
YYD2_k127_6328740_2 extracellular matrix structural constituent - - - 0.0000000000000000001338 103.0
YYD2_k127_6334885_0 Polysulphide reductase, NrfD - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 451.0
YYD2_k127_6334885_1 4Fe-4S dicluster domain K00124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 316.0
YYD2_k127_6334885_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 302.0
YYD2_k127_6334885_3 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000002134 278.0
YYD2_k127_6334885_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000004237 243.0
YYD2_k127_6334885_5 - - - - 0.0001621 46.0
YYD2_k127_6345818_0 phosphorelay signal transduction system K02481,K07712 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 505.0
YYD2_k127_6345818_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 395.0
YYD2_k127_6345818_2 Cation efflux family K16264 - - 0.0000000000000000000000000000000000000000000000000000000005933 213.0
YYD2_k127_6345818_3 Bacterial protein of unknown function (DUF885) - - - 0.0003978 48.0
YYD2_k127_6360976_0 PFAM Beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008932 449.0
YYD2_k127_6360976_1 Bacterial protein of unknown function (DUF899) - - - 0.00000000000000000000000000000000000000000000000000000000000000004659 230.0
YYD2_k127_6360976_2 Zinc metalloprotease (Elastase) - - - 0.00000000005422 77.0
YYD2_k127_6367616_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 5.77e-212 690.0
YYD2_k127_6367616_1 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006751 371.0
YYD2_k127_6367616_2 MotA/TolQ/ExbB proton channel family K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008037 295.0
YYD2_k127_6367616_3 Activator of Hsp90 ATPase 1 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002611 243.0
YYD2_k127_6367616_4 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.00000000000000000000000000000000000000000000000000000000103 211.0
YYD2_k127_6367616_5 Protein of unknown function (DUF1579) - - - 0.000000000000000000000000000000000000000000000000000000165 197.0
YYD2_k127_6367616_6 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000001878 198.0
YYD2_k127_6367616_7 AAA domain - - - 0.00000000000000000000000000000000000000000000006038 175.0
YYD2_k127_6367616_8 - - - - 0.00000000000000000000000000000001222 136.0
YYD2_k127_6367616_9 - - - - 0.0000000001914 63.0
YYD2_k127_6370386_0 Acetyl-coenzyme A synthetase N-terminus K01908 - 6.2.1.17 3.248e-306 949.0
YYD2_k127_6370386_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 501.0
YYD2_k127_6370386_2 Low affinity iron permease - - - 0.0000000000000000000000000000000000000000000001277 171.0
YYD2_k127_6370386_3 Peptidase family S51 K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.000000000000000000001663 96.0
YYD2_k127_6386424_0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 2.467e-256 809.0
YYD2_k127_6387130_0 protein secretion K15125 - - 0.0000000000000000000000000006081 128.0
YYD2_k127_6401554_0 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.0000000000000000000000000000000000000000000000000000000000008573 213.0
YYD2_k127_6401554_1 spore germination - - - 0.000000002417 65.0
YYD2_k127_6401554_2 Protein of unknown function (DUF3078) - - - 0.00000004146 64.0
YYD2_k127_668512_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007941 372.0
YYD2_k127_668512_1 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit - - - 0.0000000000000000000000000000000000000000000000001731 185.0
YYD2_k127_668512_2 cellulase activity K01201 - 3.2.1.45 0.000000000000000000000006794 112.0
YYD2_k127_668512_3 Belongs to the peptidase S8 family K01337,K01387,K05994,K08604,K14645,K20276 - 3.4.11.10,3.4.21.50,3.4.24.25,3.4.24.3 0.000000000000000001316 102.0
YYD2_k127_668512_4 TIGRFAM TonB family protein K03832 - - 0.000000000000000001386 96.0
YYD2_k127_668512_5 amine dehydrogenase activity K12287 - - 0.00000002706 68.0
YYD2_k127_668512_6 Zinc metalloprotease (Elastase) K09607 - - 0.0000009721 60.0
YYD2_k127_688082_0 Gamma-glutamyltranspeptidase K00681 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006082,GO:0006508,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0019538,GO:0019752,GO:0030288,GO:0030313,GO:0031975,GO:0034722,GO:0036374,GO:0042597,GO:0043094,GO:0043102,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070011,GO:0071704,GO:0097264,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 378.0
YYD2_k127_688082_1 Flagellar Assembly Protein A K09749 - - 0.00000000000003929 85.0
YYD2_k127_688082_2 Protein of unknown function (DUF3592) - - - 0.0004237 48.0
YYD2_k127_692554_0 radical SAM domain protein - - - 9.16e-208 658.0
YYD2_k127_692554_1 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009031 396.0
YYD2_k127_692554_2 bacterial OsmY and nodulation domain - - - 0.00000000000000000000000000000000000000002808 158.0
YYD2_k127_692554_3 - - - - 0.0000000000000001579 81.0
YYD2_k127_692554_4 - - - - 0.000001129 53.0
YYD2_k127_710605_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003108 482.0
YYD2_k127_710605_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007191 404.0
YYD2_k127_710605_2 Belongs to the SEDS family K02563,K03588 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0008360,GO:0009987,GO:0015647,GO:0015648,GO:0015835,GO:0015836,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032153,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051179,GO:0051234,GO:0051301,GO:0055085,GO:0065007,GO:0065008,GO:0071702,GO:0071705,GO:0071944,GO:1901264,GO:1901505 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 306.0
YYD2_k127_710605_3 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K01924,K02563 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0050511,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.4.1.227,6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000026 261.0
YYD2_k127_710605_4 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000001628 200.0
YYD2_k127_76304_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000001119 128.0
YYD2_k127_76304_1 positive regulation of macromolecule biosynthetic process K03973 - - 0.0000000000000000000002635 102.0
YYD2_k127_76304_2 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000559 101.0
YYD2_k127_76304_3 N-terminal domain of toast_rack, DUF2154 - - - 0.0000002523 62.0
YYD2_k127_76304_4 Reverse transcriptase-like K03469 - 3.1.26.4 0.0007563 44.0
YYD2_k127_769686_0 Belongs to the SIS family. GutQ KpsF subfamily K01627,K03281,K06041 - 2.5.1.55,5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008281 331.0
YYD2_k127_769686_1 Belongs to the KdsA family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006325 307.0
YYD2_k127_769686_2 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008781,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016311,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016791,GO:0019143,GO:0033692,GO:0034637,GO:0034645,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0070567,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 3.1.3.45 0.0000000000000000000000000000000002381 138.0
YYD2_k127_769686_3 Domain of unknown function (DUF4430) - - - 0.0004861 48.0
YYD2_k127_77319_0 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000003095 154.0
YYD2_k127_77319_1 Glycosyl transferases group 1 - - - 0.00000000000000002409 86.0
YYD2_k127_811433_0 AMP-binding enzyme C-terminal domain K01911 - 6.2.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 352.0
YYD2_k127_811433_1 carboxylic acid catabolic process K01776,K02549,K19802 GO:0008150,GO:0040007 4.2.1.113,5.1.1.20,5.1.1.3 0.000000000000000000000000000000000000007175 154.0
YYD2_k127_81476_0 Protein phosphatase 2C domain K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000009776 182.0
YYD2_k127_81476_1 Armadillo/beta-catenin-like repeats - - - 0.0000000000000000000000000000004112 136.0
YYD2_k127_81476_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 GO:0000027,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0022613,GO:0022618,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032794,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0043021,GO:0043022,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000739 103.0
YYD2_k127_81476_3 TIGRFAM anti-anti-sigma factor K04749 - - 0.000000000008022 70.0
YYD2_k127_81476_4 Anti-sigma regulatory factor (Ser Thr protein kinase) K04757 - 2.7.11.1 0.000000005248 63.0
YYD2_k127_818026_0 Bacterial protein of unknown function (DUF899) - - - 0.0000000000000000976 79.0
YYD2_k127_818026_1 Putative adhesin - - - 0.0000000000000007516 92.0
YYD2_k127_818364_0 LVIVD repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 443.0
YYD2_k127_818364_1 PFAM PfkB domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004848 280.0
YYD2_k127_818364_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000000000006264 188.0
YYD2_k127_821158_0 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000003926 237.0
YYD2_k127_821158_1 biotin acetyl-CoA-carboxylase ligase K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000002377 239.0
YYD2_k127_821158_2 Cartilage oligomeric matrix protein K04659,K16857 GO:0001501,GO:0001968,GO:0002020,GO:0003416,GO:0003417,GO:0003674,GO:0005198,GO:0005201,GO:0005488,GO:0005496,GO:0005499,GO:0005509,GO:0005515,GO:0005518,GO:0005539,GO:0005575,GO:0005576,GO:0005912,GO:0005924,GO:0005927,GO:0007155,GO:0007275,GO:0007517,GO:0008150,GO:0008201,GO:0008289,GO:0009653,GO:0009887,GO:0009888,GO:0009987,GO:0010941,GO:0016043,GO:0016203,GO:0019842,GO:0019899,GO:0022610,GO:0030054,GO:0030055,GO:0030198,GO:0031012,GO:0032501,GO:0032502,GO:0032991,GO:0033627,GO:0035265,GO:0036094,GO:0040007,GO:0042981,GO:0043062,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043169,GO:0043394,GO:0043395,GO:0044421,GO:0044877,GO:0046872,GO:0048513,GO:0048519,GO:0048523,GO:0048589,GO:0048705,GO:0048731,GO:0048736,GO:0048856,GO:0050789,GO:0050794,GO:0051216,GO:0060173,GO:0060348,GO:0060349,GO:0060350,GO:0060351,GO:0060538,GO:0060548,GO:0061061,GO:0061448,GO:0062023,GO:0065007,GO:0070161,GO:0071840,GO:0097159,GO:0097367,GO:0098868,GO:1901681 - 0.000000000000000000000000000000000000000002599 180.0
YYD2_k127_821158_3 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000001216 134.0
YYD2_k127_821158_4 PFAM OsmC family protein K07397 - - 0.0000000000000000000000000000007671 126.0
YYD2_k127_821158_5 Reprolysin (M12B) family zinc metalloprotease - - - 0.0000000000000000000008408 113.0
YYD2_k127_821158_6 NHL repeat - - - 0.0000000000000002693 94.0
YYD2_k127_821158_7 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000002321 50.0
YYD2_k127_826381_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 1.698e-269 858.0
YYD2_k127_826381_1 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 357.0
YYD2_k127_826381_2 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000005741 106.0
YYD2_k127_826381_3 deoxyhypusine monooxygenase activity K01387 - 3.4.24.3 0.000000000005078 74.0
YYD2_k127_826381_4 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.00000001433 58.0
YYD2_k127_847202_0 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000688 231.0
YYD2_k127_850152_0 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.000000000000000000000000000000000000000002372 164.0
YYD2_k127_850152_1 - - - - 0.00000000003309 74.0
YYD2_k127_850152_2 - - - - 0.0000000005101 69.0
YYD2_k127_85054_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004065 385.0
YYD2_k127_85054_1 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009698 316.0
YYD2_k127_85054_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000007791 254.0
YYD2_k127_85054_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000007303 158.0
YYD2_k127_860715_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001346 279.0
YYD2_k127_860715_1 smart pdz dhr glgf K04771,K04772 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000002048 254.0
YYD2_k127_860715_2 Deoxynucleoside kinase K15518 - 2.7.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000921 237.0
YYD2_k127_860715_3 Aldolase K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000002 198.0
YYD2_k127_860715_4 Aminotransferase class I and II K10206 - 2.6.1.83 0.0000000000000000000000000000000000004135 154.0
YYD2_k127_860715_5 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.0000000000000000000000000001141 121.0
YYD2_k127_860715_6 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000006543 121.0
YYD2_k127_860715_7 cellulase activity K01201 - 3.2.1.45 0.00000000000000000000002084 111.0
YYD2_k127_878765_0 Belongs to the ATCase OTCase family K00608,K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 439.0
YYD2_k127_878765_1 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000008648 227.0
YYD2_k127_878765_2 Amidohydrolase family K01465 - 3.5.2.3 0.00000000002138 69.0
YYD2_k127_916536_0 PglZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004221 537.0
YYD2_k127_916536_1 Integral membrane sensor signal transduction histidine kinase K07709,K13924 - 2.1.1.80,2.7.13.3,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 329.0
YYD2_k127_916536_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 GO:0001676,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0003824,GO:0003989,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006417,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0009058,GO:0009317,GO:0009329,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0017148,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032787,GO:0032991,GO:0034248,GO:0034249,GO:0042759,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:0097159,GO:1901363,GO:1901576,GO:1902494,GO:1990234,GO:2000112,GO:2000113 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006456 284.0
YYD2_k127_916536_3 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000002567 139.0
YYD2_k127_916536_4 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 GO:0001676,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0003824,GO:0003989,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006417,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0009058,GO:0009317,GO:0009329,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0017148,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032787,GO:0032991,GO:0034248,GO:0034249,GO:0042759,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:0097159,GO:1901363,GO:1901576,GO:1902494,GO:1990234,GO:2000112,GO:2000113 2.1.3.15,6.4.1.2 0.00000000000000000000000001412 113.0
YYD2_k127_916536_5 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.00000000000000000000000005457 113.0
YYD2_k127_916536_6 Glycoprotease family K01409,K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.00000000000000000001318 100.0
YYD2_k127_936328_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006097 428.0
YYD2_k127_936328_1 Surface antigen K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002995 308.0
YYD2_k127_936328_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000006194 94.0
YYD2_k127_944010_0 Saccharopine dehydrogenase C-terminal domain - - - 0.000000000000000000000000000000000000000000000191 173.0
YYD2_k127_955207_0 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007404 365.0
YYD2_k127_955207_1 Sugar-transfer associated ATP-grasp - - - 0.00000000000000000000001836 105.0
YYD2_k127_955207_2 protein trimerization - - - 0.00000000000000003516 94.0
YYD2_k127_960185_0 protein conserved in bacteria K09859 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005386 264.0
YYD2_k127_960185_1 Peptidoglycan-synthase activator LpoB K07337 - - 0.00000000000000000000000000000000000000000000000000000005288 201.0
YYD2_k127_960185_2 usher protein - - - 0.000000000000000000000000000001221 130.0
YYD2_k127_960185_3 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00005736 46.0
YYD2_k127_978928_0 Surface antigen K07277 GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 632.0
YYD2_k127_978928_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0002682,GO:0002684,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006950,GO:0008150,GO:0009314,GO:0009380,GO:0009605,GO:0009607,GO:0009628,GO:0016020,GO:0032991,GO:0035821,GO:0042802,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0071944,GO:0075136,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 597.0
YYD2_k127_978928_2 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 302.0
YYD2_k127_978928_3 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0034645,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363,GO:1901576 - 0.0000000000000000000000000000000000000000002283 161.0
YYD2_k127_978928_4 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000005627 102.0
YYD2_k127_978928_5 Outer membrane protein (OmpH-like) K06142 - - 0.0000000000000000003857 94.0
YYD2_k127_989793_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 534.0
YYD2_k127_989793_1 Phosphate transport system permease K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 357.0
YYD2_k127_989793_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003508 344.0
YYD2_k127_989793_3 PFAM response regulator receiver K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 299.0
YYD2_k127_989793_4 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003108 273.0
YYD2_k127_989793_5 - - - - 0.00000001805 66.0
YYD2_k127_989793_6 ATPase-coupled phosphate ion transmembrane transporter activity K02036 - 3.6.3.27 0.0003338 46.0