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Overview

ID MAG04640
Name YYD2_bin.26
Sample SMP0125
Taxonomy
Kingdom Archaea
Phylum Thermoproteota
Class Nitrososphaeria
Order Nitrososphaerales
Family Nitrososphaeraceae
Genus TA-21
Species TA-21 sp035620895
Assembly information
Completeness (%) 62.62
Contamination (%) 1.33
GC content (%) 35.0
N50 (bp) 3,195
Genome size (bp) 1,334,495

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1409

Gene name Description KEGG GOs EC E-value Score Sequence
YYD2_k127_101233_0 PFAM Cupin 2, conserved barrel domain protein K11312 - - 0.000000000000000000000000000000000000000000003706 166.0
YYD2_k127_101233_1 Arginase family - - - 0.0000000000000000000001121 98.0
YYD2_k127_101233_2 - - - - 0.0001353 49.0
YYD2_k127_1018701_0 DNA Topoisomerase I (eukaryota) K03163 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 498.0
YYD2_k127_1018701_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 327.0
YYD2_k127_1018701_2 SUF system FeS assembly protein K04488 - - 0.00000000000000000000000000000000000000000000000000000000000000000007236 233.0
YYD2_k127_1018701_3 DNA Topoisomerase I (eukaryota) K03163 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000004025 217.0
YYD2_k127_1018701_4 Acid phosphatase homologues K19302 - 3.6.1.27 0.00000000000000000000000000000005607 133.0
YYD2_k127_1018701_5 - - - - 0.000000000000000001656 90.0
YYD2_k127_1032860_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1109.0
YYD2_k127_1032860_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 548.0
YYD2_k127_1032860_2 D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo K09716 - 3.1.1.96 0.000000000000000000000000000000000000000000000000000000000000000000000000000006793 269.0
YYD2_k127_103527_0 Anticodon-binding domain of tRNA K01873 - 6.1.1.9 0.0 1118.0
YYD2_k127_103527_1 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 492.0
YYD2_k127_103527_2 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009639 360.0
YYD2_k127_103527_3 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 347.0
YYD2_k127_103527_4 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000005135 236.0
YYD2_k127_103527_5 UPF0126 domain - - - 0.0000000000000000000000000000000000000000000000000000000000139 212.0
YYD2_k127_103527_7 - - - - 0.0000000000000000000000000000000000000000000002281 169.0
YYD2_k127_103527_8 - - - - 0.0000000000000000000000000000047 123.0
YYD2_k127_103527_9 small nuclear ribonucleoprotein K11086 - - 0.00002133 50.0
YYD2_k127_1064093_0 phosphoribosyltransferases K04096,K07100 - - 0.000000000000000000000000000000000000000000000000001255 191.0
YYD2_k127_1064093_1 pyrroloquinoline quinone binding - - - 0.000000000005767 72.0
YYD2_k127_107135_0 carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 518.0
YYD2_k127_107135_1 MGS-like domain K01955 - 6.3.5.5 0.00000000000000000000000000000000000000000000007072 171.0
YYD2_k127_107135_2 MGS-like domain K01955 - 6.3.5.5 0.0002274 44.0
YYD2_k127_108103_0 phosphoserine phosphatase K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 316.0
YYD2_k127_108103_1 F420-0:Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000443 259.0
YYD2_k127_108103_2 Calcineurin-like phosphoesterase - - - 0.000000000000000000000002296 113.0
YYD2_k127_1084638_0 Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)-mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids K00869 - 2.7.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000002191 253.0
YYD2_k127_1084638_1 Amino acid kinase family K06981 - 2.7.4.26 0.0000000000000000000000000000000000000000000000000000000000001981 217.0
YYD2_k127_1084638_2 Belongs to the MEMO1 family K06990 - - 0.000000000000000001989 85.0
YYD2_k127_1086293_0 AAA-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 453.0
YYD2_k127_1091813_0 DNA-directed RNA polymerase, alpha subunit 40 kD subunit K03047 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006076 315.0
YYD2_k127_1091813_1 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000000000000000000000001699 223.0
YYD2_k127_1091813_2 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000000007207 219.0
YYD2_k127_1091813_3 ribosomal protein K02883 - - 0.0000000000000000000000000000000000000002253 152.0
YYD2_k127_1091813_4 - - - - 0.0000000000000008044 78.0
YYD2_k127_1091813_5 - - - - 0.0000000000005787 73.0
YYD2_k127_1100406_0 DnaJ central domain K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 467.0
YYD2_k127_1100406_1 Heat shock 70 kDa protein K04043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 377.0
YYD2_k127_1100406_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002503 260.0
YYD2_k127_1100406_3 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000005661 99.0
YYD2_k127_1100406_4 histidine kinase A domain protein - - - 0.0000000000001128 73.0
YYD2_k127_1162646_0 DNA ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004461 416.0
YYD2_k127_1163486_0 ABC-type nitrate sulfonate bicarbonate transport system, permease component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008374 346.0
YYD2_k127_1163486_1 DoxX K15977 - - 0.0000000000000000000004614 101.0
YYD2_k127_1163486_2 DSBA-like thioredoxin domain - - - 0.000000000001037 70.0
YYD2_k127_1171826_0 cation diffusion facilitator family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009818 427.0
YYD2_k127_1171826_2 oligoendopeptidase F - - - 0.0000000904 54.0
YYD2_k127_1186168_0 Belongs to the peptidase M24B family K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 302.0
YYD2_k127_1186168_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005081 304.0
YYD2_k127_1189070_0 Peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine K01456 GO:0000224,GO:0000302,GO:0001101,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006515,GO:0006516,GO:0006517,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009100,GO:0009636,GO:0009719,GO:0009725,GO:0009751,GO:0009987,GO:0010033,GO:0010035,GO:0010188,GO:0010193,GO:0014070,GO:0016787,GO:0016810,GO:0016811,GO:0019538,GO:0030163,GO:0036211,GO:0042221,GO:0042493,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051603,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1901700 3.5.1.52 0.000000000000000000000000000002627 128.0
YYD2_k127_119047_0 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 379.0
YYD2_k127_119047_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07709 - 2.7.13.3 0.0000000000000000002959 96.0
YYD2_k127_1192621_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472 - 1.1.1.336 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 563.0
YYD2_k127_1192621_1 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 316.0
YYD2_k127_1215180_0 Type III restriction enzyme, res subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 436.0
YYD2_k127_1215180_1 Type III restriction enzyme, res subunit - - - 0.000000000000000000000000000000000000000000000003299 177.0
YYD2_k127_1215180_2 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.00000000000000000000000000000000000006105 145.0
YYD2_k127_1229993_0 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 331.0
YYD2_k127_1232857_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000392 573.0
YYD2_k127_1232857_1 Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex K03264 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 300.0
YYD2_k127_123751_0 cation diffusion facilitator family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 365.0
YYD2_k127_1239792_0 Zn-dependent protease with chaperone function K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009863 267.0
YYD2_k127_1272988_0 High-affinity Fe2 Pb2 permease K07243 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002431 268.0
YYD2_k127_1272988_1 PFAM Iron dependent repressor, metal binding and dimerisation domain K03709 - - 0.0000000000000000000000000000000000000000000000000000000000000000001507 232.0
YYD2_k127_1272988_2 PQQ enzyme repeat - - - 0.0000000000000000000000000000000000000003079 163.0
YYD2_k127_127425_0 Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002348 252.0
YYD2_k127_127425_1 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.00000000000000000000000000000000000002814 144.0
YYD2_k127_127425_4 HNH nucleases K07451 - - 0.0001216 51.0
YYD2_k127_1275713_0 PFAM Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005868 602.0
YYD2_k127_1286610_0 Polyphosphate kinase 2 (PPK2) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001843 259.0
YYD2_k127_1302505_0 PFAM regulatory protein, ArsR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 586.0
YYD2_k127_1302505_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002422 266.0
YYD2_k127_1302505_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001607 265.0
YYD2_k127_1302505_3 - - - - 0.0000000000000000000000000000000000000001269 157.0
YYD2_k127_1302505_4 - - - - 0.000000000000000000000000000000000002375 142.0
YYD2_k127_1302505_5 Polysaccharide deacetylase - - - 0.00000000000001501 83.0
YYD2_k127_1310901_0 NADH ubiquinone oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000002771 216.0
YYD2_k127_1310901_1 3-isopropylmalate dehydratase, small subunit K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000001904 204.0
YYD2_k127_1310901_3 - - - - 0.000000000000000000000000000000000001755 138.0
YYD2_k127_1317357_0 divalent heavy-metal cations transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003034 409.0
YYD2_k127_1317357_1 iron dependent repressor - - - 0.0000000000000000000000000000000000000000000000000000007315 196.0
YYD2_k127_1317357_2 Alcohol dehydrogenase zinc-binding domain protein K00344,K07119 - 1.6.5.5 0.0000000000000000000000000005539 114.0
YYD2_k127_1318871_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37 K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 433.0
YYD2_k127_1318871_1 GTPase of unknown function C-terminal K06942 - - 0.0000000000000000000000000000000000000000000000000000000003288 205.0
YYD2_k127_1318871_2 Mn2 -dependent serine threonine protein kinase K08851 - 2.7.11.1 0.00000000000000000000000000000000000000000000007296 174.0
YYD2_k127_1318871_3 - - - - 0.000000000000000000000007369 108.0
YYD2_k127_1318871_4 - - - - 0.000000000000000000009167 95.0
YYD2_k127_1323820_0 CRISPR-associated protein Cas4 K07464 - 3.1.12.1 0.00000000000000000000000000000000000000000000001305 178.0
YYD2_k127_1323820_1 - - - - 0.00000000000000004215 87.0
YYD2_k127_1323820_2 tRNA pseudouridine synthase K06176 - 5.4.99.27 0.0000000000002909 70.0
YYD2_k127_1324688_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex - - - 5.493e-205 650.0
YYD2_k127_1324688_1 ATP-grasp domain K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007343 476.0
YYD2_k127_1324688_2 Sodium hydrogen exchanger - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 463.0
YYD2_k127_1324688_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 450.0
YYD2_k127_1324688_4 FeS assembly ATPase SufC K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007326 393.0
YYD2_k127_1324688_5 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 - 3.4.25.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 295.0
YYD2_k127_1324688_6 Cytidylyltransferase-like K00952 - 2.7.7.1 0.00000000000000000000000000000000000000000000000000000006286 200.0
YYD2_k127_1324688_7 PUA domain K07575 - - 0.000000000000000000000000000007239 124.0
YYD2_k127_1324688_8 PFAM ABC-2 type transporter K01992 - - 0.0000000000001632 70.0
YYD2_k127_1332926_0 Chorismate mutase type II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 448.0
YYD2_k127_1332926_1 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000003852 180.0
YYD2_k127_1332926_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000002669 166.0
YYD2_k127_1341457_0 Phosphoenolpyruvate phosphomutase - - - 0.000000000000000000000000000000000002824 140.0
YYD2_k127_1341457_1 Asparagine synthase K01953 - 6.3.5.4 0.0000003194 55.0
YYD2_k127_1345759_0 Succinyl-CoA ligase like flavodoxin domain K18593 - - 3.899e-316 981.0
YYD2_k127_1345759_1 PFAM D12 class N6 adenine-specific DNA methyltransferase K06223 - 2.1.1.72 0.0000000000000000000006487 97.0
YYD2_k127_1345759_2 Zinc finger domain - - - 0.000000000000000000001016 98.0
YYD2_k127_1372285_0 Methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000003321 198.0
YYD2_k127_1372285_1 Belongs to the MenA family. Type 1 subfamily - - - 0.000000000000000000000000008232 111.0
YYD2_k127_1375918_0 Glycosyltransferase family 28 C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 379.0
YYD2_k127_1375918_1 Sodium/calcium exchanger protein K07300 - - 0.000000000000000000000000000000000000000002713 162.0
YYD2_k127_1375918_2 NGG1p interacting factor 3 - - - 0.00000001899 57.0
YYD2_k127_137725_0 RNA-metabolising metallo-beta-lactamase K07041 - - 6.424e-280 871.0
YYD2_k127_137725_1 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 347.0
YYD2_k127_1390608_0 Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001305 260.0
YYD2_k127_1390608_1 - - - - 0.000000000000000000000000000000000005672 142.0
YYD2_k127_1411361_0 Catalyzes the ATP- and formate-dependent formylation of 5-aminoimidazole-4-carboxamide-1-beta-d-ribofuranosyl 5'- monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1- beta-d-ribofuranosyl 5'-monophosphate (FAICAR) in the absence of folates K06863 - 6.3.4.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008526 434.0
YYD2_k127_1411361_1 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008522 370.0
YYD2_k127_1411361_2 Luciferase-like monooxygenase K14728 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001129 275.0
YYD2_k127_1411361_3 helix_turn_helix ASNC type K03718 - - 0.000000000000000000000000000000000000000000000000000000000000004763 219.0
YYD2_k127_1411361_5 PFAM blue (type 1) copper domain protein - - - 0.000003769 57.0
YYD2_k127_1428237_0 resolvase K14060 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 289.0
YYD2_k127_1428237_1 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002273 278.0
YYD2_k127_1428237_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 0.0000000000000000007561 89.0
YYD2_k127_1448794_0 DNA methylase K00571,K00590 - 2.1.1.113,2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 455.0
YYD2_k127_1448794_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000002094 66.0
YYD2_k127_1463337_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01870 - 6.1.1.5 0.0 1316.0
YYD2_k127_14667_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000001066 224.0
YYD2_k127_14667_1 Transcriptional regulator - - - 0.00000000000000000187 87.0
YYD2_k127_14667_2 zinc finger - - - 0.00000000000335 67.0
YYD2_k127_1466806_0 methanogenesis marker protein 1 K09136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 578.0
YYD2_k127_1466806_1 phenylalanyl-tRNA synthetase, beta subunit K01890 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000006361 199.0
YYD2_k127_1466806_2 PFAM TfuA domain protein, core - - - 0.000000008204 57.0
YYD2_k127_1467601_0 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome K03679 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007985 343.0
YYD2_k127_1467601_1 Shwachman-Bodian-Diamond syndrome (SBDS) protein K14574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 312.0
YYD2_k127_1467601_2 Ammonium Transporter K03320 - - 0.000000000001206 67.0
YYD2_k127_1469407_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02322 - 2.7.7.7 2.946e-196 623.0
YYD2_k127_1469407_1 Involved in regulation of DNA replication K10725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009221 522.0
YYD2_k127_1469407_2 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02323 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 478.0
YYD2_k127_1469407_3 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17104 - 2.5.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 326.0
YYD2_k127_1469407_4 - - - - 0.000000000000000000000001045 110.0
YYD2_k127_1469407_5 - - - - 0.00000000000000112 85.0
YYD2_k127_1469407_6 - - - - 0.000000000001375 72.0
YYD2_k127_1472037_0 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006606 345.0
YYD2_k127_1472037_1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000104 145.0
YYD2_k127_1472037_2 Zinc finger protein K13106 GO:0000122,GO:0000902,GO:0000904,GO:0000976,GO:0000977,GO:0000978,GO:0000981,GO:0000982,GO:0000987,GO:0001012,GO:0001067,GO:0001078,GO:0001227,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0006357,GO:0007275,GO:0007399,GO:0008150,GO:0009653,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016358,GO:0019219,GO:0019222,GO:0022008,GO:0030030,GO:0030154,GO:0030182,GO:0031175,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043565,GO:0044212,GO:0044424,GO:0044464,GO:0045892,GO:0045934,GO:0048468,GO:0048519,GO:0048523,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048813,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071840,GO:0080090,GO:0097159,GO:0120036,GO:0120039,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.00004129 48.0
YYD2_k127_1487059_0 Chlorophyllase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000001348 263.0
YYD2_k127_1487059_2 Cupin - - - 0.000000000000000000642 91.0
YYD2_k127_1487059_3 small metal-binding protein - - - 0.000000001313 60.0
YYD2_k127_1490099_0 glycoside hydrolase, family K07273 - - 0.000000000000000000000000000002857 130.0
YYD2_k127_1507118_0 - - - - 0.00000000000000000000000000000002969 133.0
YYD2_k127_1537484_0 PFAM TCP-1 cpn60 chaperonin family K22447 - - 5.916e-287 887.0
YYD2_k127_1537484_1 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001834 241.0
YYD2_k127_1537484_2 Transcription elongation factor Spt5 K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000003193 241.0
YYD2_k127_1537484_3 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 0.000000000000000000000001768 104.0
YYD2_k127_1537484_4 - - - - 0.0000000000000313 77.0
YYD2_k127_1537484_6 DNA topoisomerase, type IA, central domain protein K03168,K03169 - 5.99.1.2 0.0000002482 55.0
YYD2_k127_1543406_0 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 304.0
YYD2_k127_1548380_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000003666 232.0
YYD2_k127_1548380_1 OsmC-like protein - - - 0.000000000000676 72.0
YYD2_k127_1555004_0 PFAM aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 513.0
YYD2_k127_1555004_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 313.0
YYD2_k127_1555004_2 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000005488 244.0
YYD2_k127_1555004_3 Belongs to the precorrin methyltransferase family K02303 - 2.1.1.107 0.000000000000000000000000000000000000000000000000000000000000000000003887 240.0
YYD2_k127_1558151_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000278 245.0
YYD2_k127_1558151_1 - - - - 0.0000000000000000001235 89.0
YYD2_k127_1562657_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002335 531.0
YYD2_k127_1568591_0 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 365.0
YYD2_k127_1568591_1 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000001651 147.0
YYD2_k127_1568591_2 - - - - 0.000000000000000002917 87.0
YYD2_k127_1568591_3 - - - - 0.0004362 43.0
YYD2_k127_1576398_0 ABC-type multidrug transport system, ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 347.0
YYD2_k127_1576398_1 PFAM tRNA synthetases class I (C) catalytic domain K01883 - 6.1.1.16 0.000000000000000000000000000000000000001392 154.0
YYD2_k127_1584748_0 resistance protein K14166 - - 3.509e-195 644.0
YYD2_k127_1584748_1 - - - - 0.00000000000000000003702 99.0
YYD2_k127_1588810_0 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 334.0
YYD2_k127_1590425_0 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003038 280.0
YYD2_k127_1596582_0 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001587 276.0
YYD2_k127_1596582_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000454 126.0
YYD2_k127_1617217_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.913e-288 895.0
YYD2_k127_1617217_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 281.0
YYD2_k127_1636731_0 Aldehyde dehydrogenase family K00294 - 1.2.1.88 1.44e-197 628.0
YYD2_k127_1636731_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000002613 232.0
YYD2_k127_1636731_2 - - - - 0.00001369 49.0
YYD2_k127_1648130_0 TIGRFAM 2-methylcitrate synthase citrate synthase II K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000002318 159.0
YYD2_k127_1648130_2 - - - - 0.00000000000000000000006061 100.0
YYD2_k127_1651115_0 PFAM Methyltransferase type K15256 - - 0.00000000000000000000000000000000000000002318 158.0
YYD2_k127_1651115_2 endonuclease K00986 - 2.7.7.49 0.00000000000000000001543 94.0
YYD2_k127_1661727_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005493 540.0
YYD2_k127_1661727_1 Radical SAM - - - 0.00000000000000000000000000000000000003811 145.0
YYD2_k127_1661727_2 Acts as a magnesium transporter K06213 - - 0.00000000000002053 74.0
YYD2_k127_1661727_3 PFAM phosphoesterase, RecJ domain protein K07463 - - 0.000000000005022 76.0
YYD2_k127_1661727_4 COG0608 Single-stranded DNA-specific exonuclease K07463 - - 0.0000000005357 67.0
YYD2_k127_1661727_5 Transcription factor Pcc1 - - - 0.0000532 49.0
YYD2_k127_1670802_0 Belongs to the eukaryotic ribosomal protein eS1 family K02984 - - 0.00000000000000000000000000000000000000000000000000000000000000001009 232.0
YYD2_k127_1670802_1 RNA binding K07581 - - 0.000000000000000000004349 98.0
YYD2_k127_1690210_0 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005546 427.0
YYD2_k127_1690210_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007648 287.0
YYD2_k127_1690210_2 - - - - 0.000000000000000000000000000000000000058 145.0
YYD2_k127_1690210_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000004486 91.0
YYD2_k127_1690210_4 thymidylate kinase K00943 - 2.7.4.9 0.0000000009836 61.0
YYD2_k127_1694951_0 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052,K11072,K11076 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0016020,GO:0016021,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.31 0.000000000000000000000000000000000000001308 147.0
YYD2_k127_1694951_1 COG0025 NhaP-type Na H and K H antiporters K03316 - - 0.000000000000000000007952 100.0
YYD2_k127_1695180_0 Periplasmic solute binding protein K09815 - - 0.00000000000000000000000000000000000000000000000000000000000000002441 234.0
YYD2_k127_1695180_1 Ribbon-helix-helix protein, copG family K07722 - - 0.000000000000000000000001262 105.0
YYD2_k127_1712386_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 5.989e-242 755.0
YYD2_k127_1712386_1 Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA K03265 - - 3.153e-201 636.0
YYD2_k127_1712386_2 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000372 253.0
YYD2_k127_1712386_3 HIT domain K02503 - - 0.0000000000000000000000000000000000000000005815 162.0
YYD2_k127_1717893_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 580.0
YYD2_k127_1717893_1 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005273 254.0
YYD2_k127_1717893_2 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.00000000000000000000000000000000000000000023 173.0
YYD2_k127_1717893_4 - - - - 0.000000000000000000000000000000004346 130.0
YYD2_k127_1717893_5 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 0.0000000000000000000253 93.0
YYD2_k127_1717893_6 chaperone binding K09507,K09510,K09511 GO:0000122,GO:0001671,GO:0002682,GO:0002684,GO:0003674,GO:0003712,GO:0003714,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006357,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008047,GO:0008134,GO:0008150,GO:0008593,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010646,GO:0010648,GO:0014069,GO:0016020,GO:0019219,GO:0019222,GO:0019899,GO:0023051,GO:0023057,GO:0030234,GO:0030425,GO:0030544,GO:0031072,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031647,GO:0031974,GO:0031981,GO:0032279,GO:0032781,GO:0033554,GO:0035966,GO:0036477,GO:0042221,GO:0042689,GO:0042691,GO:0042995,GO:0043005,GO:0043025,GO:0043085,GO:0043197,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043462,GO:0043618,GO:0043620,GO:0044087,GO:0044093,GO:0044297,GO:0044309,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0045595,GO:0045597,GO:0045610,GO:0045612,GO:0045746,GO:0045892,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050821,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051094,GO:0051117,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051239,GO:0051252,GO:0051253,GO:0051336,GO:0051345,GO:0051716,GO:0060255,GO:0060589,GO:0060590,GO:0061077,GO:0061827,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0090083,GO:0090084,GO:0097201,GO:0097223,GO:0097447,GO:0097458,GO:0098772,GO:0098794,GO:0098984,GO:0099522,GO:0099524,GO:0099572,GO:0120025,GO:0120038,GO:0140110,GO:1900034,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000001594 84.0
YYD2_k127_1751978_0 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000153 250.0
YYD2_k127_1751978_1 Nucleotide binding protein, PINc K07158 - - 0.000000000000000000000000005719 114.0
YYD2_k127_1751978_2 Oligosaccharyl transferase STT3 subunit K07151 - 2.4.99.18 0.00000000000000000000002592 100.0
YYD2_k127_1751978_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000009335 94.0
YYD2_k127_1769694_0 Heat shock 70 kDa protein K04043 - - 1.211e-269 833.0
YYD2_k127_1769694_1 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 433.0
YYD2_k127_1769694_10 - - - - 0.000000000003871 69.0
YYD2_k127_1769694_11 Domain of unknown function (DUF2088) - - - 0.0001527 46.0
YYD2_k127_1769694_2 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005834 426.0
YYD2_k127_1769694_3 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 355.0
YYD2_k127_1769694_4 Thioredoxin K03671 - - 0.0000000000000000000000000000000000000002843 153.0
YYD2_k127_1769694_5 Peptidyl-tRNA hydrolase PTH2 K04794 - 3.1.1.29 0.000000000000000000000000000000000000001501 149.0
YYD2_k127_1769694_6 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000126 153.0
YYD2_k127_1769694_7 Zn-ribbon RNA-binding protein with a function in translation K07580 - - 0.0000000000000000000000000000003524 123.0
YYD2_k127_1769694_8 - - - - 0.000000000000000000000000000005132 120.0
YYD2_k127_1769694_9 Promotes the exchange of GDP for GTP in EF-1-alpha GDP, thus allowing the regeneration of EF-1-alpha GTP that could then be used to form the ternary complex EF-1-alpha GTP AAtRNA K03232 - - 0.0000000000000000000000000406 109.0
YYD2_k127_180098_0 Oligopeptide/dipeptide transporter, C-terminal region K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 317.0
YYD2_k127_180098_1 Amidohydrolase family K01464 - 3.5.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001172 271.0
YYD2_k127_1802291_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005947 497.0
YYD2_k127_1802291_1 RNase L inhibitor, RLI K06174 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004018 260.0
YYD2_k127_1802624_0 D-glucuronyl C5-epimerase C-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003881 408.0
YYD2_k127_1802624_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.000000000000000000000000000000000000000000000000000001098 195.0
YYD2_k127_180739_0 DNA polymerase type-B family - - - 0.0 1463.0
YYD2_k127_180739_1 Helicase conserved C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002735 233.0
YYD2_k127_180739_2 - - - - 0.000000000000000000000000000000000000000000000001878 178.0
YYD2_k127_1813917_0 Type III restriction enzyme, res subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 355.0
YYD2_k127_1813917_2 PFAM periplasmic copper-binding - - - 0.00000000000000000000004028 104.0
YYD2_k127_1817729_0 Trypsin-like serine protease with C-terminal PDZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 398.0
YYD2_k127_1817729_1 Pyridoxamine 5'-phosphate - - - 0.00000000000000000000000000000000000000000000000000000187 198.0
YYD2_k127_1817729_2 - - - - 0.000000000000000000000000000000000001439 141.0
YYD2_k127_1825167_0 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000003697 227.0
YYD2_k127_1825167_1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - - - 0.0000001167 61.0
YYD2_k127_1829054_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005245 268.0
YYD2_k127_1829054_1 Polysaccharide deacetylase - - - 0.000000000005253 78.0
YYD2_k127_184141_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K03330 - 6.3.5.7 1.046e-204 655.0
YYD2_k127_184141_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 369.0
YYD2_k127_184141_2 RNA methylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001451 239.0
YYD2_k127_184141_3 Domain of unknown function (DUF309) K09763 - - 0.000000000000000000000000000000000000000000004675 170.0
YYD2_k127_184141_4 UDP-N-acetylglucosamine 2-epimerase - - - 0.00000001737 55.0
YYD2_k127_1898443_0 Phage Terminase - - - 9.4e-323 993.0
YYD2_k127_1898443_1 Phage portal protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 527.0
YYD2_k127_1898443_10 - - - - 0.000000000000000000002013 96.0
YYD2_k127_1898443_2 Caudovirus prohead serine protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007264 440.0
YYD2_k127_1898443_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007485 257.0
YYD2_k127_1898443_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002939 247.0
YYD2_k127_1898443_5 - - - - 0.00000000000000000000000000000000000000000000002305 173.0
YYD2_k127_1898443_6 - - - - 0.0000000000000000000000000000000013 132.0
YYD2_k127_1898443_7 - - - - 0.00000000000000000000000000000008739 127.0
YYD2_k127_1898443_8 Psort location Cytoplasmic, score 8.87 - - - 0.000000000000000000000000000007886 122.0
YYD2_k127_1898443_9 - - - - 0.0000000000000000000008682 98.0
YYD2_k127_1916199_0 Luciferase-like monooxygenase K14728 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003997 467.0
YYD2_k127_1916199_1 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007148 302.0
YYD2_k127_1916199_2 Glyoxalase-like domain - - - 0.000000000000000000000000000000000001069 144.0
YYD2_k127_1916199_3 Acylphosphatase K01512 - 3.6.1.7 0.00000000000000000000007344 101.0
YYD2_k127_1916199_4 - - - - 0.000000001629 67.0
YYD2_k127_1916199_5 ChaB K06197 - - 0.000003989 49.0
YYD2_k127_1916199_6 ChaB K06197 - - 0.00002354 48.0
YYD2_k127_1938080_0 Protein of unknown function (DUF521) K09123 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006092 423.0
YYD2_k127_1938080_1 Oligopeptide/dipeptide transporter, C-terminal region K02032 - - 0.000000000000000000000000000000000000000000000005161 176.0
YYD2_k127_1938080_2 Domain of unknown function (DUF2024) - - - 0.00000000000000000000000000000000000009842 143.0
YYD2_k127_1938080_3 Protein of unknown function DUF126 K09128 - - 0.0000000000000000000000000000008391 126.0
YYD2_k127_1954983_0 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 444.0
YYD2_k127_1954983_1 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000008301 209.0
YYD2_k127_1962280_0 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004935 494.0
YYD2_k127_1962280_1 ATP synthase subunit C K02124 - - 0.00000000003843 63.0
YYD2_k127_1965511_0 Tetrapyrrole (Corrin/Porphyrin) Methylases K05934 - 2.1.1.131 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000578 406.0
YYD2_k127_2017242_0 PFAM Alcohol dehydrogenase GroES-like domain - - - 5.813e-197 617.0
YYD2_k127_2017242_1 HpcH/HpaI aldolase/citrate lyase family K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 320.0
YYD2_k127_2017242_2 May be involved in maturation of the 30S ribosomal subunit K02966 - - 0.000000000000000000000000000000000000000000000000000000000000000000003381 237.0
YYD2_k127_2017242_3 Winged helix-turn-helix - - - 0.000000000000000000000000000000000005319 140.0
YYD2_k127_2017242_4 Belongs to the PDCD5 family K06875 - - 0.0000000000000000000000000001194 117.0
YYD2_k127_2017242_5 - - - - 0.0000000000000000000004437 100.0
YYD2_k127_2017242_6 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03540 - 3.1.26.5 0.00000000004526 63.0
YYD2_k127_2017378_0 Adenosine specific kinase K09129 - - 0.0000000000000000000000000000000000000000000000000002234 189.0
YYD2_k127_2017378_1 RNA-binding protein contains TRAM domain - - - 0.0000000000000000000000001542 107.0
YYD2_k127_2017378_2 Glycosyltransferase Family 4 - - - 0.000000000000000000001334 108.0
YYD2_k127_2024917_0 calcium proton exchanger K07300 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001606 271.0
YYD2_k127_2024917_1 - - - - 0.000000000000000000001633 98.0
YYD2_k127_2099242_0 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 413.0
YYD2_k127_2107908_0 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006584 522.0
YYD2_k127_2107908_1 N-methylhydantoinase A acetone carboxylase, beta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000002108 239.0
YYD2_k127_2107908_2 Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates K18532 - 2.7.4.3 0.0000000000000000000000000000000000005639 146.0
YYD2_k127_2142777_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 309.0
YYD2_k127_2142777_1 Phosphate uptake regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004632 310.0
YYD2_k127_2142777_2 Pfam:DUF137 K09722 - 6.3.2.36 0.0000000000000000000000000000000000000000000000000000000000000000000000211 248.0
YYD2_k127_2142777_3 kinase, sugar kinase superfamily K06982 - 2.7.1.169 0.00000000000000000000000000000000000000000000000000000000000000007159 233.0
YYD2_k127_2142777_4 Domain of unknown function (DUF4443) - - - 0.0000000000000000000000000000000000000000000000000000000000000009375 225.0
YYD2_k127_2142777_5 - - - - 0.00000000000000000001882 92.0
YYD2_k127_2142777_6 Probable cobalt transporter subunit (CbtB) - - - 0.0000000000000000001362 89.0
YYD2_k127_2142777_7 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000359 71.0
YYD2_k127_2142777_8 Probable cobalt transporter subunit (CbtA) - - - 0.000316 44.0
YYD2_k127_2160589_0 PFAM NHL repeat containing protein - - - 0.0000000000000000000000000000000000000001696 158.0
YYD2_k127_2160589_1 NHL repeat K12035 - 2.3.2.27 0.0000000001057 66.0
YYD2_k127_2163756_0 Domain of unknown function K20276 - - 0.0000000001211 68.0
YYD2_k127_2191878_0 PFAM ABC transporter related K10112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 361.0
YYD2_k127_2210555_0 Belongs to the complex I 20 kDa subunit family K00331 - 1.6.5.3 0.000000000000000000000000000000000000001547 147.0
YYD2_k127_2210555_1 CorA-like Mg2+ transporter protein K03284 GO:0000041,GO:0000287,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006824,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015087,GO:0015095,GO:0015318,GO:0015693,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042802,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0046914,GO:0046915,GO:0050897,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0055085,GO:0065003,GO:0070838,GO:0071840,GO:0071944,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:1903830 - 0.000000000000000000000000000000009394 141.0
YYD2_k127_2210555_3 cheY-homologous receiver domain - - - 0.00000000002928 68.0
YYD2_k127_2223193_0 Oxygenase, catalysing oxidative methylation of damaged DNA K09990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 340.0
YYD2_k127_2223193_1 PFAM beta-lactamase domain protein K06897 - 2.5.1.105 0.00000000000000000000000000000000000000000000000000000000000000000000000002616 261.0
YYD2_k127_2223193_2 RibD C-terminal domain - - - 0.000000000000000006256 87.0
YYD2_k127_2223193_3 YjzC-like protein - - - 0.0004335 46.0
YYD2_k127_2238076_0 oligoendopeptidase F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 571.0
YYD2_k127_2238076_1 conserved protein implicated in secretion - - - 0.0000000000000000000001459 99.0
YYD2_k127_226026_0 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000008084 213.0
YYD2_k127_226026_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000001616 113.0
YYD2_k127_2261444_0 Pyridoxamine 5'-phosphate - - - 0.00000000000000000000000000000000001952 139.0
YYD2_k127_2261444_1 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000001503 131.0
YYD2_k127_2261444_2 Haem utilisation ChuX/HutX - - - 0.000000000000000001471 90.0
YYD2_k127_2262310_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 287.0
YYD2_k127_2262310_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000005673 229.0
YYD2_k127_2308832_0 PFAM Rieske 2Fe-2S domain K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000003533 263.0
YYD2_k127_2308832_1 PFAM transposase, IS4 family protein - - - 0.0000000000000000000000000000004065 134.0
YYD2_k127_231978_0 malic enzyme K00027,K00029 - 1.1.1.38,1.1.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 553.0
YYD2_k127_231978_1 Cob(II)yrinic acid a,c-diamide reductase K04719 - 1.13.11.79 0.00000000000000222 77.0
YYD2_k127_232050_0 HELICc2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001392 268.0
YYD2_k127_232050_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000002564 69.0
YYD2_k127_2344825_0 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 3.041e-229 721.0
YYD2_k127_2344825_1 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 485.0
YYD2_k127_2344825_2 nucleotidyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000165 277.0
YYD2_k127_2344825_4 - - - - 0.00000000000003007 78.0
YYD2_k127_2362087_1 - - - - 0.000000000000000000000000000001216 122.0
YYD2_k127_2362087_2 Pfam:DUF385 - - - 0.0000000000000000000000000009188 115.0
YYD2_k127_2365562_0 - - - - 0.00000000000000000000000000000003079 133.0
YYD2_k127_2365562_1 Multicopper oxidase K00368 - 1.7.2.1 0.0000000000000000000000000000009303 125.0
YYD2_k127_2365562_2 - - - - 0.000000000009106 69.0
YYD2_k127_2365562_3 - - - - 0.0001904 52.0
YYD2_k127_2397519_0 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 GO:0000150,GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0000730,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0033554,GO:0034622,GO:0034641,GO:0042148,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0045003,GO:0046483,GO:0050896,GO:0051716,GO:0065003,GO:0065004,GO:0071704,GO:0071824,GO:0071840,GO:0090304,GO:0090735,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 497.0
YYD2_k127_2397519_1 Dodecin K09165 - - 0.00000000000485 68.0
YYD2_k127_2397519_2 - - - - 0.0000002264 61.0
YYD2_k127_2411711_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003823 273.0
YYD2_k127_2411711_1 Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs K11131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009383 240.0
YYD2_k127_2411711_2 Belongs to the cytidylate kinase family. Type 2 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000001463 194.0
YYD2_k127_2411711_3 Belongs to the archaeal adenylate kinase family K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000002876 173.0
YYD2_k127_2434577_0 PFAM Aldehyde dehydrogenase K00135,K18601 - 1.2.1.16,1.2.1.20,1.2.1.79 6.158e-208 655.0
YYD2_k127_2434577_1 3-hydroxyacyl-CoA dehydrogenase K15016 - 1.1.1.35,4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 523.0
YYD2_k127_2434577_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000009924 265.0
YYD2_k127_2434577_3 AAA domain - - - 0.00000000000000000000000000000000000000000000000000001236 194.0
YYD2_k127_2434577_4 Ribosome biogenesis protein, C-terminal K09140 - - 0.00000000000000000000000000000000000000000000000007372 182.0
YYD2_k127_2434577_5 Belongs to the UPF0201 family K09736 - - 0.000000000000000000000000004096 115.0
YYD2_k127_2434577_6 transcription factor (CBF NF-Y) - - - 0.0000000000000000000608 91.0
YYD2_k127_2437549_0 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000002462 193.0
YYD2_k127_2437549_1 - - - - 0.00000000000000000000000000000004237 132.0
YYD2_k127_246375_0 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001333 242.0
YYD2_k127_246375_1 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000002045 217.0
YYD2_k127_246375_2 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000002111 76.0
YYD2_k127_2469308_0 Protein of unknown function (DUF4255) - - - 0.00000000000000000000000000000000001344 141.0
YYD2_k127_2469308_1 helix_turn_helix, Lux Regulon - - - 0.00000002788 62.0
YYD2_k127_2471505_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 5.946e-195 632.0
YYD2_k127_2471505_1 F5/8 type C domain - - - 0.000000000000000000000000000000000000000002401 166.0
YYD2_k127_2471505_2 Archaeal TRASH domain - - - 0.0000000000000000000000000000000000000001138 154.0
YYD2_k127_2471505_4 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.0000000000000000001343 90.0
YYD2_k127_2471505_6 Heavy-metal-associated domain K01533 - 3.6.3.4 0.00000001552 59.0
YYD2_k127_2480264_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 577.0
YYD2_k127_2486084_0 Dual specificity phosphatase, catalytic domain K14165 - 3.1.3.16,3.1.3.48 0.000000000000000000000000000000000000000000001727 171.0
YYD2_k127_2486084_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000006295 84.0
YYD2_k127_2486084_3 response regulator receiver K07775 - - 0.00006653 54.0
YYD2_k127_2502248_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002866 481.0
YYD2_k127_2502248_1 - - - - 0.0000000000000000000000000000000000000000000000000000000001417 212.0
YYD2_k127_2502248_2 - - - - 0.00000000000000000000000000000233 124.0
YYD2_k127_2541449_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 2.053e-303 938.0
YYD2_k127_2541449_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 9.009e-257 796.0
YYD2_k127_2541449_2 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006729 300.0
YYD2_k127_2541449_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.00000000000000000000000000000000001862 140.0
YYD2_k127_2567820_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 3.136e-254 790.0
YYD2_k127_2567820_1 - - - - 0.000000000000000000000000000000000000000000000000000001201 197.0
YYD2_k127_2567820_3 zinc-ribbon domain - - - 0.0000000000000000000000000000000000008742 141.0
YYD2_k127_2567820_4 Queuosine biosynthesis protein QueC K06920 - 6.3.4.20 0.000000000000000000000000000001967 123.0
YYD2_k127_2567820_5 protein conserved in archaea K09723 - - 0.0000000000003667 75.0
YYD2_k127_2588091_0 HD domain K00951,K01139 - 2.7.6.5,3.1.7.2 0.000000000000000000000000000000000000000000000000000000000000000000005433 242.0
YYD2_k127_2588091_2 Glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.0000001641 56.0
YYD2_k127_2590014_0 Bacterial SH3 domain - - - 0.0001924 52.0
YYD2_k127_2596508_0 Creatinine amidohydrolase K01470 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000000000003716 234.0
YYD2_k127_2596508_2 Lrp/AsnC ligand binding domain - - - 0.00000000002077 66.0
YYD2_k127_2649478_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 350.0
YYD2_k127_2649478_1 protein (ATP-grasp superfamily) K07159 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001085 272.0
YYD2_k127_2655542_1 Winged helix-turn-helix DNA-binding - - - 0.000000000000000000001534 102.0
YYD2_k127_2655542_2 - - - - 0.000000000000000000009179 96.0
YYD2_k127_2657563_0 Catalyzes two subsequent steps in gluconeogenesis the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P) K01622 - 3.1.3.11,4.1.2.13 2.085e-206 646.0
YYD2_k127_2657563_1 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 357.0
YYD2_k127_2657563_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000001208 225.0
YYD2_k127_2668109_0 Nucleotidyl transferase K00966 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 346.0
YYD2_k127_2668109_1 Phosphomethylpyrimidine kinase K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 328.0
YYD2_k127_2668109_2 nucleotidyltransferase activity - - - 0.0000000000000000002526 94.0
YYD2_k127_2674036_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 444.0
YYD2_k127_2674036_1 Diphthamide synthase K06927 - 6.3.1.14 0.000000000000000000000000000000000000000000004416 168.0
YYD2_k127_2674036_2 Responsible for synthesis of pseudouridine from uracil- 54 and uracil-55 in the psi GC loop of transfer RNAs K07583 - 5.4.99.25 0.0000000000000000000000000000000000006707 153.0
YYD2_k127_2674036_3 Belongs to the eukaryotic ribosomal protein eS31 family K02977 - - 0.000000000000000001165 86.0
YYD2_k127_2674036_4 Belongs to the eukaryotic ribosomal protein eS24 family K02974 - - 0.0000007169 56.0
YYD2_k127_2686322_0 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006769 432.0
YYD2_k127_2686322_1 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000000000000000000000000000001821 204.0
YYD2_k127_2686322_2 Pyridoxamine 5'-phosphate - - - 0.0000000000000000000000000000000000000000000000000000000272 199.0
YYD2_k127_2686322_3 - - - - 0.00000000000000000000000000000000000000000000000002855 181.0
YYD2_k127_2686322_4 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000006277 168.0
YYD2_k127_2686322_5 - - - - 0.00000000000000000000000000000000000001474 149.0
YYD2_k127_2686322_8 small metal-binding protein - - - 0.000002114 51.0
YYD2_k127_2694061_0 tRNA pseudouridine synthase K06176 - 5.4.99.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007706 370.0
YYD2_k127_2694061_1 Belongs to the small heat shock protein (HSP20) family - - - 0.00000000000000000003383 91.0
YYD2_k127_2700329_0 Alcohol dehydrogenase zinc-binding domain protein K00344,K07119 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007315 454.0
YYD2_k127_2700329_1 COG0346 Lactoylglutathione lyase and related lyases K15975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 441.0
YYD2_k127_2700329_2 phospholipase Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001984 244.0
YYD2_k127_27145_0 Sodium hydrogen exchanger K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005987 498.0
YYD2_k127_27145_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001782 275.0
YYD2_k127_27145_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000005558 106.0
YYD2_k127_27145_3 - - - - 0.00000000002068 67.0
YYD2_k127_2729122_0 Amino acid kinase family K00928 - 2.7.2.4 8.051e-194 615.0
YYD2_k127_2729122_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 309.0
YYD2_k127_2729122_2 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000000000000000000001344 213.0
YYD2_k127_2729122_3 Cupin domain - - - 0.0000000000000000000000005137 107.0
YYD2_k127_2743540_0 Vinylacetyl-CoA Delta-isomerase K14534 - 4.2.1.120,5.3.3.3 4.087e-282 872.0
YYD2_k127_2743540_1 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000002071 189.0
YYD2_k127_2743540_2 Belongs to the eukaryotic ribosomal protein eL40 family K02927 - - 0.000000000000000000000099 99.0
YYD2_k127_2743540_4 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000003049 72.0
YYD2_k127_275294_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 0.0 1011.0
YYD2_k127_275294_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 1.366e-263 815.0
YYD2_k127_275294_2 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 339.0
YYD2_k127_275294_3 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 317.0
YYD2_k127_275294_4 CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002634 267.0
YYD2_k127_275294_5 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.0000000000000000000000000000000000000000000000000000000002402 208.0
YYD2_k127_275294_6 ATP synthase subunit C K02124 - - 0.00000000000000000000000466 105.0
YYD2_k127_275294_7 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.00000001411 56.0
YYD2_k127_2753818_0 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000000001509 202.0
YYD2_k127_2753818_1 snRNP Sm proteins K04796 - - 0.000000000000000000000000000000000004769 137.0
YYD2_k127_2753818_2 Binds to the 23S rRNA K02922 - - 0.000000000000000000000008353 101.0
YYD2_k127_2753818_3 - - - - 0.0000000000199 73.0
YYD2_k127_2760666_0 Anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005069 424.0
YYD2_k127_2760666_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003125 280.0
YYD2_k127_2765300_0 COG1335 Amidases related to nicotinamidase K09020 - 3.5.1.110 0.000000000000000000000000000000000000000000000000000000000000000001987 230.0
YYD2_k127_2765300_1 helicase activity K06915 - - 0.000000000000000002439 99.0
YYD2_k127_2807183_0 aspartate-semialdehyde dehydrogenase K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007251 550.0
YYD2_k127_2807183_1 PFAM Aminotransferase class I and II K04720 - 4.1.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008857 339.0
YYD2_k127_2807183_2 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007273 289.0
YYD2_k127_2807183_3 Lrp/AsnC ligand binding domain K03718 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001837 249.0
YYD2_k127_2807183_4 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000000000000006559 81.0
YYD2_k127_2807183_5 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04798 - - 0.00000000000000222 77.0
YYD2_k127_2815010_0 PFAM Permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 481.0
YYD2_k127_2815010_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002593 459.0
YYD2_k127_2815010_2 Oxidoreductase family, NAD-binding Rossmann fold K18855 - 1.1.1.374 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 362.0
YYD2_k127_2815010_3 Hexapeptide repeat of succinyl-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002212 246.0
YYD2_k127_2815010_4 Nicotinamide-nucleotide adenylyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000007536 233.0
YYD2_k127_2815010_5 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000002372 232.0
YYD2_k127_2815010_6 Aminotransferase class-V K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000002706 226.0
YYD2_k127_2815010_7 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 - - 0.000000000000000000000000000000000000000000001911 166.0
YYD2_k127_2815010_8 Lrp/AsnC ligand binding domain - - - 0.00000000000000000000000000000000000003679 144.0
YYD2_k127_2815010_9 Trm112p-like protein - - - 0.000000000000000000000000000000000001777 140.0
YYD2_k127_2842223_0 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006235 475.0
YYD2_k127_2842223_1 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 441.0
YYD2_k127_2842223_2 Methyltransferase K18911 - 2.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000004096 252.0
YYD2_k127_2842223_3 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000007086 124.0
YYD2_k127_2844112_0 PFAM CBS domain - - - 0.00000000000002789 79.0
YYD2_k127_2844112_1 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.000008054 52.0
YYD2_k127_2848974_0 PFAM Ferritin, Dps family protein K02217 - 1.16.3.2 0.0000000000000000000000000000000000000000000000000000001359 199.0
YYD2_k127_2848974_1 - - - - 0.0000000000000000000401 99.0
YYD2_k127_2848974_2 - - - - 0.00000000009943 68.0
YYD2_k127_2848974_3 SMART nuclease (SNase domain protein) K01174 - 3.1.31.1 0.00006513 47.0
YYD2_k127_2875360_0 May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity K06965 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 359.0
YYD2_k127_2875360_1 Archaeal transcriptional regulator TrmB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 311.0
YYD2_k127_2875360_2 - - - - 0.00000000000000000000000000000000000000000000000005242 181.0
YYD2_k127_2875360_3 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000003912 108.0
YYD2_k127_2876132_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 498.0
YYD2_k127_2876132_1 Cytidylyltransferase-like K00952 - 2.7.7.1 0.00000000000000004951 84.0
YYD2_k127_2881161_0 Hydroxymethylglutaryl-coenzyme A synthase N terminal K01641 - 2.3.3.10 2.656e-246 766.0
YYD2_k127_2881161_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 523.0
YYD2_k127_2924429_0 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 610.0
YYD2_k127_2924429_1 ferredoxin - - - 0.0000000000000000000000000001955 113.0
YYD2_k127_2930760_0 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000957 290.0
YYD2_k127_2930760_1 glutamine amidotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002629 239.0
YYD2_k127_2942375_0 Catalyzes the conversion of dihydroorotate to orotate K00226,K00254,K17723,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.1,1.3.1.14,1.3.5.2,1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 344.0
YYD2_k127_2942375_1 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 305.0
YYD2_k127_2942375_10 - - - - 0.00000001742 63.0
YYD2_k127_2942375_11 Transcriptional regulator - - - 0.0009772 47.0
YYD2_k127_2942375_2 PFAM TatD-related deoxyribonuclease K07051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003466 275.0
YYD2_k127_2942375_3 PFAM TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003592 276.0
YYD2_k127_2942375_4 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K02823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008563 268.0
YYD2_k127_2942375_5 MafB19-like deaminase K01493 - 3.5.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000001628 250.0
YYD2_k127_2942375_6 Asp/Glu/Hydantoin racemase K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000005979 233.0
YYD2_k127_2942375_8 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000002858 104.0
YYD2_k127_2942375_9 Belongs to the P(II) protein family K04751 - - 0.00000000006931 63.0
YYD2_k127_2944393_0 Binds directly to 23S rRNA. Probably involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005444 285.0
YYD2_k127_2944393_1 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000003843 188.0
YYD2_k127_2960667_0 cellulose binding - - - 0.00000000000000000000000000000000000000007351 162.0
YYD2_k127_2960667_1 Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box) 5'-GGA TG GA-3' K03556 - - 0.00000000000103 73.0
YYD2_k127_2999525_0 Belongs to the MCM family K10726 - - 0.0 1054.0
YYD2_k127_2999525_1 GINS complex protein K09723 - - 0.0000000000000000000000000000000000000000000000000000005704 198.0
YYD2_k127_2999525_2 Replication factor C K04801 - - 0.000000000000000000000000000000000000004457 149.0
YYD2_k127_3034835_0 homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 441.0
YYD2_k127_3034835_1 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001147 280.0
YYD2_k127_3034835_2 tRNA intron endonuclease, N-terminal domain K01170 - 4.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000008694 250.0
YYD2_k127_3034835_3 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000002533 176.0
YYD2_k127_3034835_4 - - - - 0.000000004871 61.0
YYD2_k127_3035863_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 4.002e-218 683.0
YYD2_k127_3035863_1 Translin family K07477 - - 0.000000000000000000000000000000000000000000000000000000000012 213.0
YYD2_k127_3035863_2 A structure-specific endonuclease that resolves Holliday junction (HJ) intermediates during genetic recombination. Cleaves 4-way DNA junctions introducing paired nicks in opposing strands, leaving a 5'-terminal phosphate and a 3'-terminal hydroxyl group that are ligated to produce recombinant products - - - 0.00000000000000000000000000000000000000000000000000003922 193.0
YYD2_k127_3035863_3 Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX K17759 - 5.1.99.6 0.00000000000000000000000004683 110.0
YYD2_k127_3039619_0 FAD linked - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006189 460.0
YYD2_k127_3039619_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000001164 89.0
YYD2_k127_3052701_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 550.0
YYD2_k127_3052701_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 291.0
YYD2_k127_3052701_2 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001721 275.0
YYD2_k127_3052701_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000005145 160.0
YYD2_k127_3069857_0 PFAM Mechanosensitive ion channel - - - 0.00000000000000005733 89.0
YYD2_k127_3069857_1 Double zinc ribbon - - - 0.0001107 49.0
YYD2_k127_3072913_0 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 608.0
YYD2_k127_3072913_1 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 446.0
YYD2_k127_3072913_2 Staphylococcal nuclease homologues - - - 0.0000000000002301 79.0
YYD2_k127_3072913_3 - - - - 0.00000005864 59.0
YYD2_k127_3095282_0 NOSIC (NUC001) domain K14564 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 364.0
YYD2_k127_3095282_1 Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA K04795 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004769 275.0
YYD2_k127_3095282_2 DeoC/LacD family aldolase K08321 - 2.3.1.245 0.00000000000000000000000000000000000006843 144.0
YYD2_k127_3095282_3 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000002955 85.0
YYD2_k127_3095282_4 - - - - 0.000003196 50.0
YYD2_k127_3112635_0 DNA polymerase K02319 - 2.7.7.7 0.0 1174.0
YYD2_k127_3112635_1 Belongs to the class-II aminoacyl-tRNA synthetase family K01868 - 6.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 502.0
YYD2_k127_3112635_2 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005937 398.0
YYD2_k127_3112635_3 - - - - 0.0000000000000000000000003989 106.0
YYD2_k127_3135714_1 Methionine biosynthesis protein MetW - - - 0.0000000000000001338 89.0
YYD2_k127_3159159_0 Arsenite-activated ATPase ArsA K01551,K13993 - 3.6.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 362.0
YYD2_k127_3159159_2 - - - - 0.0000000165 59.0
YYD2_k127_3162890_0 Exchanges the guanine residue with 7-cyano-7- deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D- loop) of archaeal tRNAs K18779 - 2.4.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000518 400.0
YYD2_k127_3162890_1 PFAM Like-Sm ribonucleoprotein, core - - - 0.0000000000000000000000000000000000000000000000000000007956 195.0
YYD2_k127_3162890_3 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0000000000315 68.0
YYD2_k127_3165640_0 CHRD domain - - - 0.000000000000000000000004834 109.0
YYD2_k127_3165640_1 PFAM Hemolysin-type calcium-binding repeat (2 copies) - - - 0.0000000002044 66.0
YYD2_k127_3169553_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 2.31e-207 650.0
YYD2_k127_3169553_1 Peptidase family M3 K08602 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 499.0
YYD2_k127_3169553_2 ThiF family K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 470.0
YYD2_k127_3169553_3 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.0000000000000000000000000000000000000000000001808 169.0
YYD2_k127_3171670_0 COG1653 ABC-type sugar transport system, periplasmic component K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005089 297.0
YYD2_k127_3171670_1 Histidine kinase-like ATPases K07677,K07679,K13924,K20974 - 2.1.1.80,2.7.13.3,3.1.1.61 0.000000000000000121 84.0
YYD2_k127_3172212_0 N-methylhydantoinase A acetone carboxylase, beta subunit - - - 4.672e-292 908.0
YYD2_k127_3172212_1 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.0000000000000000000000000000000000002506 145.0
YYD2_k127_3177072_0 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000002452 209.0
YYD2_k127_3192543_0 Succinyl-CoA ligase like flavodoxin domain K18594 - - 6.055e-271 839.0
YYD2_k127_3192543_1 Iron-sulfur cluster assembly accessory protein K13628 - - 0.000000000000000000000000000000000000000000000000000000002068 202.0
YYD2_k127_3192543_2 Aminotransferase class-V K20247,K22207 - 4.4.1.28,4.4.1.36 0.0000000001243 62.0
YYD2_k127_3202738_0 HELICc2 - - - 0.00000000000000000000000000000000000000000001903 175.0
YYD2_k127_3202738_1 - - - - 0.00000000001954 67.0
YYD2_k127_323416_0 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K07558 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000002022 261.0
YYD2_k127_323416_1 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000007758 113.0
YYD2_k127_323416_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.00000000000000000000001988 99.0
YYD2_k127_3246194_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000509 520.0
YYD2_k127_3246194_1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000723 234.0
YYD2_k127_3246194_2 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000001429 225.0
YYD2_k127_3246194_3 COG1653 ABC-type sugar transport system, periplasmic component K02027 - - 0.00000000000000000000000000000000000000000000000000000000000007061 218.0
YYD2_k127_3281050_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005664 339.0
YYD2_k127_3281050_1 Belongs to the class-II aminoacyl-tRNA synthetase family K01868 - 6.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009139 314.0
YYD2_k127_3290644_0 TIGRFAM glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 574.0
YYD2_k127_3290644_1 PFAM S-layer - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008472 387.0
YYD2_k127_3290644_2 magnesium chelatase K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 314.0
YYD2_k127_3290644_3 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000000000000000000000000000000000000201 240.0
YYD2_k127_3290644_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000006347 222.0
YYD2_k127_3290644_5 Formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000001288 177.0
YYD2_k127_3324572_0 PFAM NHL repeat containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000001384 225.0
YYD2_k127_3324572_1 Cobalamin B12-binding domain protein K16955,K22491 - - 0.0000000000000000000000000000000000000000000000000000000000001784 222.0
YYD2_k127_3324572_2 - - - - 0.00000000000000000000000000000000000000001953 154.0
YYD2_k127_3324572_3 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.0000000000000000000000000165 115.0
YYD2_k127_332667_0 ester cyclase - - - 0.000000000000000000000000000000000000000000000000002018 186.0
YYD2_k127_332667_1 Activator of Hsp90 ATPase - - - 0.0000000000000000000008906 100.0
YYD2_k127_332667_2 Transcriptional regulator - - - 0.000000001796 62.0
YYD2_k127_332667_3 HNH endonuclease K07451 - - 0.0004874 46.0
YYD2_k127_3349670_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472 - 1.1.1.336 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001642 278.0
YYD2_k127_3349670_1 GTPase of unknown function C-terminal K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000005778 223.0
YYD2_k127_3349670_2 GlcNAc-PI de-N-acetylase - - - 0.000000004375 58.0
YYD2_k127_33700_0 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 429.0
YYD2_k127_3379973_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003466 329.0
YYD2_k127_3379973_1 AhpC/TSA antioxidant enzyme K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000001299 190.0
YYD2_k127_3379973_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03058 - 2.7.7.6 0.0000000000000000000000000000000000000002691 150.0
YYD2_k127_3425309_0 Glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.0000000000000000000000000000000005569 134.0
YYD2_k127_3425309_1 PFAM CHAD domain containing protein K08296 - - 0.00000000008168 72.0
YYD2_k127_342774_0 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000000000000000000003195 218.0
YYD2_k127_342774_1 Ferritin-like domain K04047 - - 0.000000000000000000000000000000000000000001187 162.0
YYD2_k127_342774_2 Cyclophilin-like K09143 - - 0.000000000000000000000000000000000257 135.0
YYD2_k127_342774_3 glucosylceramidase activity - - - 0.00000000000000000000000008732 110.0
YYD2_k127_342774_4 PFAM NHL repeat containing protein - - - 0.000000000000000000000002148 106.0
YYD2_k127_342774_5 Calcineurin-like phosphoesterase - - - 0.000000000000000000001905 108.0
YYD2_k127_3463714_0 Radical SAM K11781 - 2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005796 589.0
YYD2_k127_3463714_1 Radical SAM K11780 - 2.5.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009635 437.0
YYD2_k127_348524_0 Na -dependent transporter K03453 - - 0.000000000000000000000000000000000000005436 151.0
YYD2_k127_348524_2 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.00002357 51.0
YYD2_k127_3516685_0 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071 413.0
YYD2_k127_3516685_1 NurA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 347.0
YYD2_k127_3516685_2 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000006256 238.0
YYD2_k127_3516685_3 helicase activity K06915 - - 0.0000000000000000000000000000000000000004776 153.0
YYD2_k127_354962_0 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007912 293.0
YYD2_k127_354962_1 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000396 194.0
YYD2_k127_354962_3 - - - - 0.0000006807 54.0
YYD2_k127_3562372_0 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 301.0
YYD2_k127_3562372_1 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000006557 198.0
YYD2_k127_3562372_2 Universal stress protein - - - 0.000000000000000000000000000000551 126.0
YYD2_k127_3562372_3 - - - - 0.000000000000000000000000000001225 128.0
YYD2_k127_3562372_4 - - - - 0.00006689 49.0
YYD2_k127_3562372_5 elongation factor Tu - - - 0.0006651 42.0
YYD2_k127_3586507_0 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001297 252.0
YYD2_k127_3633949_0 Deoxyhypusine synthase K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 502.0
YYD2_k127_3633949_1 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs K07573 - - 0.0000000000000000000000000000000000000000000000000000005433 199.0
YYD2_k127_366722_1 - - - - 0.00000000000000000000000000000000000000008932 155.0
YYD2_k127_366722_2 pyridoxamine 5-phosphate K07005 - - 0.000000000000000000000000000000000002215 142.0
YYD2_k127_366722_3 RNA-binding protein contains TRAM domain - - - 0.0000000000000001013 83.0
YYD2_k127_3676067_0 Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication K04802 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006177 282.0
YYD2_k127_3676067_1 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000001523 211.0
YYD2_k127_3676067_2 - - - - 0.000000000000000000000000000000000000000000000000000000000561 206.0
YYD2_k127_3676067_3 Belongs to the archaeal rpoM eukaryotic RPA12 RPB9 RPC11 RNA polymerase family K03057 - - 0.000000000000000000000000000000109 126.0
YYD2_k127_3676067_4 - - - - 0.0000000000000000001984 87.0
YYD2_k127_3676067_5 RNA polymerase Rpb3/Rpb11 dimerisation domain K03056 - 2.7.7.6 0.0000000000000004231 81.0
YYD2_k127_3692943_0 GTPase of unknown function C-terminal K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 312.0
YYD2_k127_3722716_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K01953,K06927 - 6.3.1.14,6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 491.0
YYD2_k127_3722716_1 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.00000000000000000000000000000000000000000000000006558 185.0
YYD2_k127_3722716_2 response regulator, receiver K03413 - - 0.00005735 51.0
YYD2_k127_3725205_0 peptidyl-tyrosine sulfation - - - 0.000000012 68.0
YYD2_k127_3725205_1 response regulator, receiver - - - 0.000002384 60.0
YYD2_k127_3785590_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003894 555.0
YYD2_k127_3785590_1 Cobalamin synthesis G C-terminus K02189 - 3.7.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 394.0
YYD2_k127_3785590_2 DNA-directed RNA polymerase K03049 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 306.0
YYD2_k127_3785590_3 Involved in the catabolism of quinolinic acid (QA) K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 294.0
YYD2_k127_3785590_4 Belongs to the UPF0218 family K09735 - - 0.0000000000000000000000000000001503 131.0
YYD2_k127_3785590_5 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000001413 121.0
YYD2_k127_3785590_6 Transcription elongation factor Spt4 K03050 - 2.7.7.6 0.00000000000000000001477 92.0
YYD2_k127_3789630_1 - - - - 0.0000000000000000000000000000004806 126.0
YYD2_k127_3789630_2 Bacterial Fe(2+) trafficking - - - 0.0000000000000000000000000003569 115.0
YYD2_k127_3789630_3 - - - - 0.0000000000005012 75.0
YYD2_k127_3789630_4 Zinc finger, C2H2 type - - - 0.000003222 49.0
YYD2_k127_379490_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02322 - 2.7.7.7 0.0 1080.0
YYD2_k127_379490_1 - - - - 0.0000000000000000000000000000009804 122.0
YYD2_k127_3798488_0 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 361.0
YYD2_k127_3798488_1 ATP synthase (C/AC39) subunit K02119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004254 344.0
YYD2_k127_379894_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 3.294e-208 657.0
YYD2_k127_379894_1 Cytidylyltransferase-like K00952 - 2.7.7.1 0.000000000000000000000000000007511 120.0
YYD2_k127_38046_0 FeS assembly protein SufB K09014 - - 1.466e-288 887.0
YYD2_k127_38046_1 Siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000005167 252.0
YYD2_k127_38046_2 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000001078 226.0
YYD2_k127_38046_3 Guanylyl transferase CofC like K14941 - 2.7.7.68 0.000000000000000000000000000004265 127.0
YYD2_k127_38046_4 Uncharacterised protein family UPF0052 K11212 - 2.7.8.28 0.00000000000000000000000004059 117.0
YYD2_k127_38046_5 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000001699 62.0
YYD2_k127_3810171_0 Protein of unknown function (DUF4242) - - - 0.00000000000000002297 83.0
YYD2_k127_3810171_1 response regulator, receiver - - - 0.00000000005728 68.0
YYD2_k127_3810171_2 response regulator K07720 - - 0.0000000002988 66.0
YYD2_k127_3824051_0 Carbamoyl-phosphate synthase L chain K18603 - 6.4.1.2,6.4.1.3 6.915e-239 747.0
YYD2_k127_3824051_1 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 361.0
YYD2_k127_3824051_2 tRNA methyl transferase K06864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 328.0
YYD2_k127_3824051_3 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K18604 - 2.1.3.15,6.4.1.2,6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002911 307.0
YYD2_k127_3824051_4 PFAM Glycosyl transferase family 2 K00752 - 2.4.1.212 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000848 292.0
YYD2_k127_3824051_5 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000005359 203.0
YYD2_k127_3824051_6 biotin carboxyl carrier K00627,K01571,K15037,K18605 - 2.3.1.12,4.1.1.3 0.000000000000000000000000000000000000000000000000001336 187.0
YYD2_k127_3824051_7 ATP-grasp domain K01955 - 6.3.5.5 0.00000000000000000000000000000000000000004367 165.0
YYD2_k127_3824051_8 DNA polymerase IV (family X) K02347,K04477 - - 0.000000000000002984 83.0
YYD2_k127_3834720_0 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000009963 128.0
YYD2_k127_3843079_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000001037 257.0
YYD2_k127_3843079_1 response regulator, receiver - - - 0.00000000000001579 78.0
YYD2_k127_3846370_0 Purple acid Phosphatase, N-terminal domain - - - 0.00000000000000000000000003716 121.0
YYD2_k127_3861000_0 Cupin superfamily (DUF985) K09705 - - 0.00000000000000000169 88.0
YYD2_k127_3867740_0 COGs COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase - - - 0.00000000000000000000000000000000000000000000000000000004656 201.0
YYD2_k127_3867740_1 chlorophyll binding - - - 0.0000001173 63.0
YYD2_k127_389432_0 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 353.0
YYD2_k127_389432_1 - - - - 0.0000000000000000000000000001563 120.0
YYD2_k127_389432_2 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.0000000000000006933 77.0
YYD2_k127_389432_3 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains K17830 - 1.3.1.101,1.3.7.11 0.00002507 46.0
YYD2_k127_3905597_0 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003865 575.0
YYD2_k127_3905597_1 Archaeal ammonia monooxygenase subunit A (AmoA) K10944 - 1.14.18.3,1.14.99.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005754 424.0
YYD2_k127_3905597_11 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.00003509 55.0
YYD2_k127_3905597_2 pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007379 403.0
YYD2_k127_3905597_3 Monooxygenase subunit B protein K10945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001025 263.0
YYD2_k127_3905597_4 Voltage gated chloride channel K03281 - - 0.00000000000000000000000000000000000000000000000000000000000000000007844 252.0
YYD2_k127_3905597_5 DnaJ-class molecular chaperone with C-terminal Zn finger domain - - - 0.00000000000000000000000000000000000000000000000000006612 192.0
YYD2_k127_3905597_6 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000000000000002319 179.0
YYD2_k127_3905597_7 - - - - 0.000000000000000000000000000000000000002798 148.0
YYD2_k127_3905597_8 - - - - 0.0000000000000000000006891 99.0
YYD2_k127_3905597_9 serine-type endopeptidase activity - - - 0.000000000000002151 83.0
YYD2_k127_3924561_0 DEAD/H associated K03724 - - 5.684e-254 799.0
YYD2_k127_3924561_1 UbiA prenyltransferase K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009531 319.0
YYD2_k127_3924561_2 Biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000001394 183.0
YYD2_k127_3924561_3 Protein of unknown function (DUF763) K09003 - - 0.000000000000003525 77.0
YYD2_k127_3939790_0 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007628 462.0
YYD2_k127_3939790_1 8-amino-7-oxononanoate synthase K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 387.0
YYD2_k127_3939790_2 conserved protein implicated in secretion - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000331 252.0
YYD2_k127_3939790_3 - - - - 0.00000000000000000000000000005071 118.0
YYD2_k127_3939790_4 - - - - 0.0000000000000000000000000009582 115.0
YYD2_k127_3939790_5 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00006997 49.0
YYD2_k127_394348_1 Pfam:DUF385 - - - 0.0000000000000000000000000003558 116.0
YYD2_k127_394348_2 PFAM transcriptional regulator PadR family protein - - - 0.0000000000000000002788 90.0
YYD2_k127_394348_3 - - - - 0.0000002018 53.0
YYD2_k127_394348_4 - - - - 0.000001406 61.0
YYD2_k127_3968271_0 Initiation factor K03242 - - 1.087e-213 669.0
YYD2_k127_3968271_1 component I K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 497.0
YYD2_k127_3968271_2 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009474 350.0
YYD2_k127_3968271_3 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 311.0
YYD2_k127_3968271_4 Belongs to the eukaryotic ribosomal protein eS6 family K02991 - - 0.000000000000000000000000000000000000000000001529 168.0
YYD2_k127_3968271_5 - - - - 0.0000000000003174 70.0
YYD2_k127_3968271_6 Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - - 0.00000519 49.0
YYD2_k127_401582_0 Protein of unknown function (DUF354) K09726 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009502 361.0
YYD2_k127_401582_1 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001499 280.0
YYD2_k127_4037559_0 COG0530 Ca2 Na antiporter K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 410.0
YYD2_k127_4037559_1 Trypsin-like serine protease with C-terminal PDZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 295.0
YYD2_k127_4037559_2 Belongs to the small heat shock protein (HSP20) family - - - 0.0007843 43.0
YYD2_k127_406450_0 Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily K05829 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 592.0
YYD2_k127_406450_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K05830 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 520.0
YYD2_k127_406450_2 Involved in both the arginine and lysine biosynthetic pathways. Phosphorylates the LysW-bound precursors glutamate (for arginine biosynthesis), respectively alpha-aminoadipate (for lysine biosynthesis) K05828 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 371.0
YYD2_k127_406450_3 COG1522 Transcriptional regulators - - - 0.000000000000001303 82.0
YYD2_k127_406450_4 HMGL-like K01649 - 2.3.3.13 0.0000000000856 62.0
YYD2_k127_407228_0 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 370.0
YYD2_k127_407228_1 COG0346 Lactoylglutathione lyase and related lyases K00457 - 1.13.11.27 0.0000000000000000000000000000006786 126.0
YYD2_k127_407228_2 - - - - 0.00000000003476 69.0
YYD2_k127_4080573_0 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005024 297.0
YYD2_k127_4080573_1 - - - - 0.00000000000000000000000000000000000001507 147.0
YYD2_k127_4080573_2 ribosomal protein K02866 - - 0.00000000000000000000000000000000002699 136.0
YYD2_k127_4082362_0 Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur K03146 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 469.0
YYD2_k127_4082362_1 - - - - 0.000000000000000000000000000000000000001741 156.0
YYD2_k127_4118413_0 DEAD DEAH box helicase K05592 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004026 543.0
YYD2_k127_4118413_1 Aminotransferase class-V K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009054 408.0
YYD2_k127_4118413_2 Zinc finger domain - - - 0.00000000000000000000000000002665 119.0
YYD2_k127_4118413_3 - - - - 0.00000000000000000000001997 108.0
YYD2_k127_4127397_0 F5/8 type C domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 388.0
YYD2_k127_4127397_1 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000000000000000005411 186.0
YYD2_k127_4127397_2 AhpC/TSA family - - - 0.000000000000000000000000000000000000000000000001 179.0
YYD2_k127_4127397_3 nucleoside hydrolase - - - 0.00000000000000000000000000000000000000000003271 185.0
YYD2_k127_412967_0 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001679 283.0
YYD2_k127_412967_1 - - - - 0.0000007485 55.0
YYD2_k127_4149809_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 410.0
YYD2_k127_4149809_1 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008381 314.0
YYD2_k127_4151571_0 elongation factor Tu - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004043 286.0
YYD2_k127_4157076_0 inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004855 417.0
YYD2_k127_4157076_1 inner membrane component K02034 - - 0.000000000000000000001532 98.0
YYD2_k127_4190511_0 Phosphoglycolate phosphatase K22223 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007894 312.0
YYD2_k127_4190511_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000009917 214.0
YYD2_k127_4190563_0 Sulfite reductase K00392 - 1.8.7.1 1.644e-284 885.0
YYD2_k127_4190563_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 453.0
YYD2_k127_4190563_2 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000002764 216.0
YYD2_k127_4190563_3 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000000000004417 84.0
YYD2_k127_420315_0 TIGRFAM ABC transporter, substrate-binding protein, aliphatic sulfonates family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007686 469.0
YYD2_k127_420315_1 PFAM (2R)-phospho-3-sulfolactate synthase ComA K08097 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 4.4.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 432.0
YYD2_k127_420315_2 COG0607 Rhodanese-related sulfurtransferase - - - 0.0000000000000000000000000000004289 130.0
YYD2_k127_4219561_0 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009419 550.0
YYD2_k127_4219561_1 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 496.0
YYD2_k127_4219561_2 ATPase family associated with various cellular activities (AAA) K04748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 384.0
YYD2_k127_4219561_3 magnesium chelatase K03405 - 6.6.1.1 0.0000000000002157 74.0
YYD2_k127_4256808_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 8.785e-245 764.0
YYD2_k127_4256808_1 Belongs to the carbohydrate kinase PfkB family K00852 - 2.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 366.0
YYD2_k127_4256808_2 Catalyzes the transfer of diphosphate from ATP to 6- hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6- hydroxymethyl-7,8-dihydropterin diphosphate (6-HMDP) K07142 - 2.7.6.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002452 277.0
YYD2_k127_4256808_3 - - - - 0.000000000000000000000000000000000000000000000000001716 190.0
YYD2_k127_4256808_4 FUN14 family - - - 0.0000000000000000000000319 103.0
YYD2_k127_4256808_5 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs K07573 - - 0.0000000000000000000002182 98.0
YYD2_k127_4272878_0 RNA-metabolising metallo-beta-lactamase K07041 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 428.0
YYD2_k127_4272878_1 Pfam:DUF552 K09152 - - 0.000000000000000000000000000000000002772 139.0
YYD2_k127_4338019_0 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.0 1340.0
YYD2_k127_4338019_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000003352 106.0
YYD2_k127_4338019_2 - - - - 0.000000000000007257 78.0
YYD2_k127_437048_0 3-isopropylmalate dehydratase, large subunit K01703 - 4.2.1.33,4.2.1.35 5.184e-236 737.0
YYD2_k127_437048_1 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 - 3.4.25.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 343.0
YYD2_k127_437048_2 ERCC4 domain K10848 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003501 244.0
YYD2_k127_437048_3 phosphoglucomutase phosphomannomutase alpha beta alpha domain I - - - 0.00000000000000000000000000000000000005726 147.0
YYD2_k127_4375519_0 Archaeal Nre, N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009938 419.0
YYD2_k127_4395128_0 Glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 292.0
YYD2_k127_4395128_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 296.0
YYD2_k127_4395128_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00150 - 1.2.1.59 0.0000005113 51.0
YYD2_k127_4395128_3 nucleoside-diphosphate sugar epimerase - - - 0.000009263 48.0
YYD2_k127_439545_0 Uncharacterised protein family UPF0052 K11212 - 2.7.8.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 320.0
YYD2_k127_439545_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001734 239.0
YYD2_k127_4406628_0 PFAM Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 308.0
YYD2_k127_4406628_1 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.0000000000002572 79.0
YYD2_k127_4433227_0 Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K18882 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 397.0
YYD2_k127_4433227_1 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000001316 144.0
YYD2_k127_4433227_2 Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K02683 - - 0.000000000000000000000000000001491 124.0
YYD2_k127_444639_0 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 435.0
YYD2_k127_444639_1 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.0000000000000000000000000000000000003806 150.0
YYD2_k127_444639_2 Belongs to the eukaryotic ribosomal protein eL21 family K02889 - - 0.0000000000000000000000000000001169 125.0
YYD2_k127_444639_3 RNA polymerase Rpb4 K03051 - 2.7.7.6 0.00000001476 57.0
YYD2_k127_4453149_0 Belongs to the RtcB family K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000001234 256.0
YYD2_k127_4453149_1 PFAM Alcohol dehydrogenase GroES domain protein, Alcohol dehydrogenase zinc-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000003353 227.0
YYD2_k127_4453149_2 - - - - 0.00000000000000000000000000000000002697 138.0
YYD2_k127_4453149_3 Tetrapyrrole (Corrin/Porphyrin) Methylases K05934 - 2.1.1.131 0.0000000000000000000000000000001328 124.0
YYD2_k127_446277_0 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000001227 166.0
YYD2_k127_446277_1 protein conserved in archaea - - - 0.000000000000000000000000000006723 125.0
YYD2_k127_446277_3 - - - - 0.0000179 51.0
YYD2_k127_4489668_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001828 240.0
YYD2_k127_4489668_1 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000012 132.0
YYD2_k127_4489668_2 Membrane protein involved in the export of O-antigen and teichoic acid K16693 - - 0.000000008682 65.0
YYD2_k127_4490122_0 glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004561 402.0
YYD2_k127_4490122_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000007333 232.0
YYD2_k127_4500156_0 SAICAR synthetase K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000686 303.0
YYD2_k127_4500156_1 Domain of unknown function (DUF371) K09738 - - 0.000000000000000000000000000000000001525 143.0
YYD2_k127_4500156_2 UbiD family decarboxylase K03182 - 4.1.1.98 0.0000000000000000000001121 98.0
YYD2_k127_4500156_3 Proteasome endopeptidase complex K03432 - 3.4.25.1 0.0000000000000000000004222 96.0
YYD2_k127_4500197_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 301.0
YYD2_k127_4512335_0 Fumarase C C-terminus K01744 - 4.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 519.0
YYD2_k127_4512335_1 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000000002103 222.0
YYD2_k127_4512335_2 heptosyltransferase K02849 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0071704,GO:0071967,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.0004026 45.0
YYD2_k127_4513581_0 - - - - 0.0003277 47.0
YYD2_k127_452184_0 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000864 351.0
YYD2_k127_452184_1 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006705 333.0
YYD2_k127_452184_2 - - - - 0.00002705 47.0
YYD2_k127_4554011_0 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000425 280.0
YYD2_k127_4554011_2 Peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine K01456 GO:0000224,GO:0000302,GO:0001101,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006515,GO:0006516,GO:0006517,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009100,GO:0009636,GO:0009719,GO:0009725,GO:0009751,GO:0009987,GO:0010033,GO:0010035,GO:0010188,GO:0010193,GO:0014070,GO:0016787,GO:0016810,GO:0016811,GO:0019538,GO:0030163,GO:0036211,GO:0042221,GO:0042493,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051603,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1901700 3.5.1.52 0.000000000003674 69.0
YYD2_k127_4562103_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00150 - 1.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000596 486.0
YYD2_k127_4573080_0 Protein of unknown function (DUF1326) - - - 0.00000000001744 64.0
YYD2_k127_4573422_0 hydroxymethylglutaryl-CoA reductase (NADPH) activity K00021 - 1.1.1.34 0.0 1030.0
YYD2_k127_4573422_1 Pterin binding enzyme K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003985 278.0
YYD2_k127_4573422_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.000000000000000000000000000000000000000000000000000000000000000000000000000005198 265.0
YYD2_k127_4574573_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains K00313 - - 3.018e-250 786.0
YYD2_k127_4574573_1 Electron transfer flavoprotein domain K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 432.0
YYD2_k127_4574573_2 Redoxin - - - 0.00000000000000000000000000000000000000000000000000001301 190.0
YYD2_k127_4581825_0 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000044 189.0
YYD2_k127_4581825_2 PFAM NHL repeat containing protein - - - 0.000001686 51.0
YYD2_k127_4599752_0 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 2.694e-196 624.0
YYD2_k127_4599752_1 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01959 - 6.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008081 427.0
YYD2_k127_4599752_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0042866,GO:0043436,GO:0043891,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 314.0
YYD2_k127_4599752_3 Coenzyme A transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000269 224.0
YYD2_k127_4599752_4 zinc finger K03498 - - 0.000000000000000000000000000000000000000000000005519 178.0
YYD2_k127_4599752_5 Biotin-requiring enzyme - - - 0.0000000000004785 76.0
YYD2_k127_4641419_0 PFAM Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000002233 188.0
YYD2_k127_4641419_1 Iron/zinc purple acid phosphatase-like protein C - - - 0.00000000000000000000000000000000000002017 160.0
YYD2_k127_4641419_2 Polysaccharide deacetylase - - - 0.0000139 52.0
YYD2_k127_4650226_0 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 317.0
YYD2_k127_4650226_1 Aldehyde dehydrogenase family K00294 - 1.2.1.88 0.000000000000000000000000000014 122.0
YYD2_k127_4652531_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005921 462.0
YYD2_k127_4652531_1 GHMP kinases N terminal domain K00891 - 2.7.1.71 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000308 290.0
YYD2_k127_4652531_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000001793 258.0
YYD2_k127_4652531_3 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000001164 87.0
YYD2_k127_4662327_0 Thiolase, N-terminal domain K00626 - 2.3.1.9 1.793e-216 675.0
YYD2_k127_4662327_1 nucleic-acid-binding protein containing a Zn-ribbon K07068 - - 0.000000000000000000000000000000000000000009653 156.0
YYD2_k127_4662327_2 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.000000000003247 70.0
YYD2_k127_4667707_0 Amino acid permease - - - 2.059e-307 960.0
YYD2_k127_4667707_1 High-affinity Fe2 Pb2 permease K07243 - - 0.0000000000000000000000000000000000000001985 162.0
YYD2_k127_4704594_0 tRNA methyltransferase complex GCD14 subunit K07442 - 2.1.1.219,2.1.1.220 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 329.0
YYD2_k127_4704594_1 Diphthamide synthase K06927 - 6.3.1.14 0.00000000000002618 74.0
YYD2_k127_4704594_2 - - - - 0.00000000000003796 75.0
YYD2_k127_4710108_0 ERCC4 domain K10896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004881 264.0
YYD2_k127_4710108_1 Trypsin-like serine protease with C-terminal PDZ domain - - - 0.000000000000000000000000000000000000000000000000000000006524 206.0
YYD2_k127_4710108_2 - - - - 0.00000000000000000000000000000001147 130.0
YYD2_k127_4710108_3 - - - - 0.0000000000000000005202 90.0
YYD2_k127_4758720_0 Pfam:DUF377 K20885 - 2.4.1.339,2.4.1.340 0.00000000000000000000000000000000000000000000000000000000000000000000000000961 262.0
YYD2_k127_4758720_1 Iron-binding zinc finger CDGSH type - - - 0.00000000000000000000000000000000000000000000000009015 185.0
YYD2_k127_4758720_2 sodium:proton antiporter activity K03316 - - 0.00000000000000000000000000000000001096 137.0
YYD2_k127_4758720_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000002188 102.0
YYD2_k127_4758720_4 - - - - 0.00000000000001521 78.0
YYD2_k127_476366_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003114 303.0
YYD2_k127_476366_1 - - - - 0.0000000000000000000000000000000000000000000000009093 183.0
YYD2_k127_476366_2 - - - - 0.0000000000000000000000000000000000000002306 151.0
YYD2_k127_476366_4 - - - - 0.00000000000000000002027 91.0
YYD2_k127_4767409_0 transferase activity, transferring glycosyl groups K00752 - 2.4.1.212 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003054 323.0
YYD2_k127_4767409_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000006205 212.0
YYD2_k127_4767409_2 Belongs to the glycosyl hydrolase 5 (cellulase A) family K05991 - 3.2.1.123 0.0001347 51.0
YYD2_k127_4777411_0 ABC-type multidrug transport system ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003753 315.0
YYD2_k127_4777411_1 Belongs to the glycosyl hydrolase 5 (cellulase A) family K05991 - 3.2.1.123 0.00000001018 67.0
YYD2_k127_4777411_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate - - - 0.00001323 47.0
YYD2_k127_4786468_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009744 593.0
YYD2_k127_4786468_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 531.0
YYD2_k127_4786468_2 Methionine synthase K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 468.0
YYD2_k127_4786468_3 Involved in regulation of DNA replication K10725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007983 459.0
YYD2_k127_4786468_4 Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000002243 264.0
YYD2_k127_4786468_5 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000001477 262.0
YYD2_k127_4786468_7 regulatory protein, arsR - - - 0.00000000000000000000006187 100.0
YYD2_k127_4800797_0 argininosuccinate lyase K01755 - 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000005086 247.0
YYD2_k127_4800797_1 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000002266 199.0
YYD2_k127_4800797_2 Iron-sulfur cluster assembly protein - - - 0.000000000000000000000000000000000000000000000002545 174.0
YYD2_k127_4811569_0 Heme copper-type cytochrome quinol K02274 - 1.9.3.1 4.651e-253 788.0
YYD2_k127_4811569_1 Enoyl-(Acyl carrier protein) reductase - - - 2.03e-251 789.0
YYD2_k127_4811569_2 Cytochrome oxidase assembly protein K02259 - - 0.00000000000000000000000000000000000000000000000000003367 191.0
YYD2_k127_4811569_3 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000001594 101.0
YYD2_k127_4811569_4 - - - - 0.00000000000000000002464 98.0
YYD2_k127_4811569_5 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000006966 91.0
YYD2_k127_4819212_0 Multicopper oxidase type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 374.0
YYD2_k127_4819212_1 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000006535 239.0
YYD2_k127_4838372_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001022 283.0
YYD2_k127_4838372_1 glutamine amidotransferase K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000004017 169.0
YYD2_k127_4848208_0 Belongs to the UPF0284 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 365.0
YYD2_k127_4848208_1 TIGRFAM glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 - 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002773 349.0
YYD2_k127_4848208_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000005563 239.0
YYD2_k127_4848208_3 Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX K17759 - 5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000008026 235.0
YYD2_k127_4848350_0 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 336.0
YYD2_k127_4848350_1 phosphoglucomutase phosphomannomutase alpha beta alpha domain I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 300.0
YYD2_k127_4848350_2 Located on the platform of the 30S subunit K02948 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004898 250.0
YYD2_k127_4848350_3 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000002928 133.0
YYD2_k127_4848350_4 zinc finger - - - 0.000000000005037 67.0
YYD2_k127_4848833_0 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.0000000000000000000000000000000000000000000000000000000000001836 223.0
YYD2_k127_4849255_1 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000003533 183.0
YYD2_k127_4849255_2 Luciferase-like monooxygenase K21835 - 1.1.98.5 0.0000000000000000000000000000000000000000000007922 172.0
YYD2_k127_4869191_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000002794 231.0
YYD2_k127_488158_2 Major Facilitator Superfamily - - - 0.0001919 44.0
YYD2_k127_4883003_0 Diacylglycerol kinase - - - 0.000000000000007706 83.0
YYD2_k127_4901492_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000697 506.0
YYD2_k127_4901492_1 3-isopropylmalate dehydratase, small subunit K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000002422 244.0
YYD2_k127_4901492_3 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000003118 179.0
YYD2_k127_4901492_4 - - - - 0.00000000000000000000000000000000000000001708 158.0
YYD2_k127_4901492_5 Protein of unknown function, DUF255 K06888 - - 0.000000000000000000000000000001745 125.0
YYD2_k127_4917044_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K18604 - 2.1.3.15,6.4.1.2,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 608.0
YYD2_k127_4917044_1 - K03646 - - 0.00000000000000002025 83.0
YYD2_k127_4921611_0 phosphohistidine phosphatase, SixA K08296 - - 0.0000000000000000000000000000000000000000244 158.0
YYD2_k127_4921611_1 TIGRFAM phosphohistidine phosphatase SixA K08296 - - 0.000000000000000000000000006264 116.0
YYD2_k127_4924767_0 RNase L inhibitor, RLI K06174 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 353.0
YYD2_k127_4924767_1 Met-10+ like-protein K15429 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005448 307.0
YYD2_k127_4924767_2 FR47-like protein K03789 - 2.3.1.128 0.000000000000000000000000000000000000000000000000000000000000000000000001874 248.0
YYD2_k127_4924767_3 Domain of unknown function (DUF2088) - - - 0.00000000000000000000000000000000000001863 158.0
YYD2_k127_4925170_0 COG1522 Transcriptional regulators - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 432.0
YYD2_k127_4925170_2 - - - - 0.00000000000000000001257 95.0
YYD2_k127_4925170_3 - - - - 0.0000000000000001961 90.0
YYD2_k127_4925352_0 Cysteine synthase K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 516.0
YYD2_k127_4925352_1 redox protein, regulator of disulfide bond formation - - - 0.000000000000000000000000001771 113.0
YYD2_k127_4925352_2 F420-0:Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.00000000000008283 72.0
YYD2_k127_4928287_0 membrane-associated protein domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004213 243.0
YYD2_k127_4928287_1 haloacid dehalogenase-like hydrolase K07026 - 3.1.3.70 0.000000000000000000000000000000000000000000000008654 182.0
YYD2_k127_4928287_2 DNA Topoisomerase I (eukaryota) K03163 - 5.99.1.2 0.000000000000000000000005414 102.0
YYD2_k127_4928790_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006798 413.0
YYD2_k127_4948821_0 Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids K16306 - 2.2.1.10,4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005561 354.0
YYD2_k127_4948821_1 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000003036 141.0
YYD2_k127_4966579_0 Galactose oxidase, central domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 309.0
YYD2_k127_4980801_0 RHS repeat-associated core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003105 275.0
YYD2_k127_4980801_1 Protein of unknown function (DUF1493) K02078 - - 0.000000000000000000000000000000003534 132.0
YYD2_k127_5017910_0 Tyrosine--tRNA ligase K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003239 355.0
YYD2_k127_5017910_1 Amidohydrolase family K01464 - 3.5.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006453 293.0
YYD2_k127_5021440_0 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 366.0
YYD2_k127_5024949_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 300.0
YYD2_k127_5024949_1 Glyoxalase-like domain K01759 - 4.4.1.5 0.000000000000000000000000000000005006 130.0
YYD2_k127_5028296_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 2.897e-219 689.0
YYD2_k127_5028296_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008607 604.0
YYD2_k127_5028296_2 Produces ATP from ADP in the presence of a proton gradient across the membrane K02119 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002397 260.0
YYD2_k127_5028296_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.0000000000000000000000000000000000000000007718 164.0
YYD2_k127_5028296_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 0.000000000000000000000000000000000009286 140.0
YYD2_k127_5028296_5 ATP synthase subunit C K02124 - - 0.000000000000000000000000004073 113.0
YYD2_k127_5028296_6 Produces ATP from ADP in the presence of a proton gradient across the membrane K02122 - - 0.0000000000002529 74.0
YYD2_k127_5028296_7 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.000007225 49.0
YYD2_k127_5028296_8 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.00005796 52.0
YYD2_k127_5029576_0 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 326.0
YYD2_k127_5029576_1 Binds to the 23S rRNA K02885 - - 0.00000000000000000000000000000000000000000000000000009094 189.0
YYD2_k127_5029576_2 - - - - 0.000000000000000000000000000000000000000000000007748 174.0
YYD2_k127_5029576_3 ribosomal protein K02912 - - 0.0000000000000000000000000000000000000000000003654 171.0
YYD2_k127_5029576_4 D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo K09716 - 3.1.1.96 0.00000000000000000000000000000000000005101 145.0
YYD2_k127_5029576_5 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.00000000000000000000000000915 113.0
YYD2_k127_5029576_6 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000004187 73.0
YYD2_k127_5036486_0 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000003233 216.0
YYD2_k127_504482_0 Catalyzes the release of L-lysine from LysW -gamma-L- lysine and the release of L-ornithine from LysW -L-ornithine K05831 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005033 537.0
YYD2_k127_504482_1 diphthine synthase K20215 - 2.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007052 336.0
YYD2_k127_504482_2 Lysine biosynthesis K05827 - 6.3.2.43 0.000000000000005151 75.0
YYD2_k127_5107487_0 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000006154 263.0
YYD2_k127_5107487_1 Cobalamin B12-binding domain protein - - - 0.00000000000000000000000000000000000000000000000596 181.0
YYD2_k127_5107487_2 PIN domain of ribonuclease K07060 - - 0.00000000003316 67.0
YYD2_k127_5134016_0 Polysaccharide deacetylase - - - 0.0000000000000000000003479 108.0
YYD2_k127_5134016_1 Transcription factor zinc-finger K09981 - - 0.00000000000008618 75.0
YYD2_k127_5164123_0 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007775 369.0
YYD2_k127_5164123_1 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000003789 147.0
YYD2_k127_5179645_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 435.0
YYD2_k127_5179645_1 Belongs to the universal ribosomal protein uS5 family K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 349.0
YYD2_k127_5179645_2 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000000000000000000000000000000001208 225.0
YYD2_k127_5179645_3 ribosomal protein K02907 - - 0.00000000000000000000000000000000000000000000000000002948 191.0
YYD2_k127_5179645_4 AIR carboxylase K06898 - - 0.000000000000000000000000000000000000000309 151.0
YYD2_k127_5179645_5 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000003945 147.0
YYD2_k127_5185215_0 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006584 311.0
YYD2_k127_5185215_1 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001967 295.0
YYD2_k127_5199496_0 PFAM ABC transporter K09817 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000695 288.0
YYD2_k127_5199496_1 ABC 3 transport family K09816 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002342 280.0
YYD2_k127_5199496_2 Periplasmic solute binding protein K09815 - - 0.00000000001654 64.0
YYD2_k127_5202067_0 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004255 398.0
YYD2_k127_5202393_0 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004981 497.0
YYD2_k127_5202393_1 Mg2 transporter protein K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000713 387.0
YYD2_k127_5202393_10 - - - - 0.000000000005178 67.0
YYD2_k127_5202393_2 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 386.0
YYD2_k127_5202393_3 Phosphoadenosine phosphosulfate reductase family K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009621 328.0
YYD2_k127_5202393_4 RNA methylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 295.0
YYD2_k127_5202393_5 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001438 279.0
YYD2_k127_5202393_6 - - - - 0.000000000000000000000000000000000000000000007514 171.0
YYD2_k127_5202393_7 HIT domain K02503 - - 0.00000000000000000000000000000000000000001571 157.0
YYD2_k127_5202393_8 hydrolase (HAD superfamily) K01091,K01560,K01561,K07025 - 3.1.3.18,3.8.1.2,3.8.1.3 0.00000000000000000000000000000000000001407 153.0
YYD2_k127_5202393_9 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02259 - - 0.000000000000000000221 93.0
YYD2_k127_5205503_0 Major Intrinsic Protein K06188 - - 0.000000000000000000000000000000000000000000000000000000000001398 212.0
YYD2_k127_5205503_1 SPTR Cupin 2 conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000005045 201.0
YYD2_k127_5205503_2 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000000000000000003122 169.0
YYD2_k127_5210647_0 Proteasome endopeptidase complex K03432 - 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 375.0
YYD2_k127_5210647_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001713 265.0
YYD2_k127_5210647_2 ribosomal protein L3 K02906 - - 0.0000000000000000000000000000000000000000000000000000000000001185 218.0
YYD2_k127_5210647_3 Putative RNA methyltransferase K09142 - - 0.0000000000000000000000000000000000000000000000000000000000001218 222.0
YYD2_k127_5229915_0 GTPase of unknown function C-terminal K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 601.0
YYD2_k127_5229915_1 phosphohydrolase (DHH superfamily) K07097 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006905 279.0
YYD2_k127_5229915_2 - - - - 0.0000000000000000000005799 95.0
YYD2_k127_5229915_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03059 - 2.7.7.6 0.0000000000000000000007101 95.0
YYD2_k127_5234042_0 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000001078 233.0
YYD2_k127_5234042_1 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000003753 209.0
YYD2_k127_5234042_2 K homology RNA-binding domain K06961 - - 0.0000000000000000000000000000000000000000000004159 172.0
YYD2_k127_5234042_3 Protein of unknown function (DUF424) K09148 - - 0.0000000000000002182 83.0
YYD2_k127_5244900_0 Isocitrate isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009031 428.0
YYD2_k127_5244900_1 Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.000000000000000000000000000000000000000000000000000000000003535 210.0
YYD2_k127_5244900_2 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.0000000000000000000000000000000000124 136.0
YYD2_k127_5244900_3 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.0000000000000002711 79.0
YYD2_k127_52460_0 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000000000000000000000000000000000000000000000000000006688 235.0
YYD2_k127_52460_1 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000000000001517 234.0
YYD2_k127_52460_2 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000113 216.0
YYD2_k127_52460_3 Belongs to the eukaryotic ribosomal protein eS4 family K02987 - - 0.0000000000000000000000000000000000000008819 153.0
YYD2_k127_52460_4 ribosomal protein S14 K02954 - - 0.0000000000000000000000002423 105.0
YYD2_k127_52460_5 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000002144 95.0
YYD2_k127_5268576_0 Belongs to the complex I 49 kDa subunit family K00333 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 451.0
YYD2_k127_5268576_1 Belongs to the complex I 20 kDa subunit family K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000003647 249.0
YYD2_k127_5268576_2 NADH ubiquinone oxidoreductase 27 kD subunit K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000008417 232.0
YYD2_k127_5269144_0 Glycosyltransferase Family 4 - - - 0.0000003284 63.0
YYD2_k127_5273645_0 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 568.0
YYD2_k127_5273645_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000006458 60.0
YYD2_k127_527747_0 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000004868 178.0
YYD2_k127_527747_1 - - - - 0.000000000000000000000000000000000000000000002455 169.0
YYD2_k127_527747_2 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) K05967 - - 0.000000000000000000000000000000000005219 138.0
YYD2_k127_527747_3 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000003877 122.0
YYD2_k127_5302130_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008038 414.0
YYD2_k127_5302130_1 F420-0:Gamma-glutamyl ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001759 281.0
YYD2_k127_5302130_2 - - - - 0.000000000000000000000000000000000000001877 149.0
YYD2_k127_5303877_0 antibiotic catabolic process K18235 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 458.0
YYD2_k127_5303877_1 Phosphoglycerate kinase K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000116 154.0
YYD2_k127_5306694_0 PFAM FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000972 396.0
YYD2_k127_5306694_1 - - - - 0.0000000000000000000000003519 108.0
YYD2_k127_5306694_2 FAD dependent oxidoreductase K09471 - - 0.0000000000000000000001589 99.0
YYD2_k127_5312641_0 aspartate carbamoyltransferase K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 433.0
YYD2_k127_5314066_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005479 522.0
YYD2_k127_5314066_1 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.0000005113 51.0
YYD2_k127_5336754_0 Contacts the emerging nascent chain on the ribosome K03626 - - 0.000000000000000000000000000000000000000000000005788 173.0
YYD2_k127_5336754_1 - - - - 0.0000000000000000000000000000000000000001043 158.0
YYD2_k127_5336754_2 H subunit K02107 - - 0.00000000000000001501 87.0
YYD2_k127_5350175_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 337.0
YYD2_k127_5350175_1 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003948 287.0
YYD2_k127_5367485_0 Belongs to the MCM family K10726 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 327.0
YYD2_k127_5367485_1 DNA-binding transcription factor activity - - - 0.0000000000000000000000000000000000000000000001086 175.0
YYD2_k127_5367485_2 Trypsin-like serine protease with C-terminal PDZ domain - - - 0.00000000000000000000000000000000000003203 149.0
YYD2_k127_5367485_3 - - - - 0.00000000000000000000000000000000007634 136.0
YYD2_k127_5367485_4 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000123 94.0
YYD2_k127_5379270_0 PFAM SPFH domain Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006939 408.0
YYD2_k127_5379270_1 Protein of unknown function (DUF541) K09807 - - 0.000000000000000000000000000000004606 138.0
YYD2_k127_5379270_2 zinc finger - - - 0.000000000000000001032 91.0
YYD2_k127_5379270_3 HD domain K00951,K01139 - 2.7.6.5,3.1.7.2 0.0000008115 52.0
YYD2_k127_538387_0 ABC1 family - - - 2.492e-217 686.0
YYD2_k127_539256_0 Oligosaccharyl transferase STT3 subunit K07151 - 2.4.99.18 0.0 1032.0
YYD2_k127_539256_1 Deoxyhypusine synthase K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004358 454.0
YYD2_k127_539256_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002578 224.0
YYD2_k127_539256_3 low-complexity proteins - - - 0.0000000000000000000000000004501 117.0
YYD2_k127_539256_4 response regulator, receiver - - - 0.0000000000000005712 83.0
YYD2_k127_5413260_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 606.0
YYD2_k127_5413260_1 PFAM NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000062 98.0
YYD2_k127_5413260_2 - - - - 0.00000000000000000005147 95.0
YYD2_k127_5432713_0 Major Facilitator Superfamily - - - 0.000000000000000009903 86.0
YYD2_k127_5432713_3 Polysaccharide deacetylase - - - 0.000107 49.0
YYD2_k127_5441292_0 TIGRFAM phage plasmid-related protein TIGR03299 - - - 0.000000000000000007886 95.0
YYD2_k127_5447622_0 Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe) K15449 - 4.1.3.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005392 542.0
YYD2_k127_5447622_1 Belongs to the HAM1 NTPase family K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000002971 184.0
YYD2_k127_5447622_2 Lysin motif - - - 0.00000000000000003204 81.0
YYD2_k127_5447622_3 response regulator, receiver - - - 0.00000000007775 68.0
YYD2_k127_5453106_0 Circadian clock protein KaiC K06945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003888 285.0
YYD2_k127_5453106_1 - - - - 0.0000000000000000000000000001041 123.0
YYD2_k127_5453106_2 COG0455 ATPases involved in chromosome partitioning K03496,K03609 - - 0.00000000000000002249 84.0
YYD2_k127_5466728_0 ATP corrinoid adenosyltransferase K19221 - 2.5.1.17 0.00000000000000000000000000000000000000000000004338 173.0
YYD2_k127_5466728_1 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.000000000000000000000000000000000000000000127 162.0
YYD2_k127_5466728_2 Tetrahydromethanopterin S-methyltransferase, subunit A K00577 - 2.1.1.86 0.00000000000000000000000000000000001782 141.0
YYD2_k127_5468147_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 503.0
YYD2_k127_5468147_1 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.000000000000000000001444 99.0
YYD2_k127_5468147_2 Ribosomal protein S30 K02983 - - 0.00000000000000000003542 91.0
YYD2_k127_5468147_3 Involved in the catabolism of quinolinic acid (QA) K00767 - 2.4.2.19 0.000000000000001203 78.0
YYD2_k127_5474447_0 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005803 285.0
YYD2_k127_5474447_1 4Fe-4S binding domain K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000002951 254.0
YYD2_k127_5480634_0 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003452 278.0
YYD2_k127_5480634_1 UreF K03188 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006877 255.0
YYD2_k127_5480634_2 Urease accessory protein UreE K03187 - - 0.0000000000001419 78.0
YYD2_k127_5489434_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 4.195e-218 683.0
YYD2_k127_5489434_1 Toprim domain - - - 0.0000000000000000008461 91.0
YYD2_k127_5489434_2 Iron-sulfur cluster assembly accessory protein K13628 - - 0.00000000000000001791 81.0
YYD2_k127_5489434_3 mttA/Hcf106 family K03116 - - 0.00000000000001927 77.0
YYD2_k127_5497099_0 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004486 526.0
YYD2_k127_5497099_1 Electron transfer flavoprotein domain K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000003227 237.0
YYD2_k127_55054_0 chromosome segregation and condensation protein ScpA K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003436 270.0
YYD2_k127_55054_1 Belongs to the UPF0147 family K09721 - - 0.00000000000000000000000000000000006255 135.0
YYD2_k127_55054_2 RNA-metabolising metallo-beta-lactamase K07041 - - 0.000000000000000000000000003006 111.0
YYD2_k127_55054_4 segregation and condensation protein K06024 - - 0.000000000000005486 76.0
YYD2_k127_5535388_0 Predicted membrane protein (DUF2070) K08979 - - 0.000000000000000000000000000000000000000000000000000000000000000001023 240.0
YYD2_k127_5535388_1 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 GO:0008150,GO:0040007 5.4.99.18 0.000000000000000000000000000000000000000000000000000000001904 204.0
YYD2_k127_5535388_2 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.00000000000000000000000000000000000000878 148.0
YYD2_k127_5548804_0 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03166 - 5.99.1.3 4.211e-206 644.0
YYD2_k127_5548804_1 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004696 329.0
YYD2_k127_5576674_0 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.0000000000000000000000000001771 123.0
YYD2_k127_5577992_0 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.0000000000000000000000000000003882 123.0
YYD2_k127_5577992_1 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.000000000000000000000000000012 121.0
YYD2_k127_5577992_3 Belongs to the glycosyl hydrolase 5 (cellulase A) family K05991 - 3.2.1.123 0.0006069 52.0
YYD2_k127_5602288_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 556.0
YYD2_k127_5602288_1 Lysine biosynthesis K05827 - 6.3.2.43 0.00000000000000000000000000000000000000000000000000000000000000000000001422 246.0
YYD2_k127_5602288_2 lysine biosynthesis protein LysW K05826 - - 0.000000000000000000002095 94.0
YYD2_k127_5608914_0 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 302.0
YYD2_k127_5608914_1 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002302 250.0
YYD2_k127_5636582_0 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.000000000000000000000000000000000000000000000000000000000000002937 228.0
YYD2_k127_5636582_1 PFAM GvpD gas vesicle - - - 0.0000000000000001595 93.0
YYD2_k127_5636582_2 - - - - 0.000000000000001666 79.0
YYD2_k127_5636582_3 Transcriptional regulator - - - 0.0000184 51.0
YYD2_k127_5636582_4 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 0.0009538 45.0
YYD2_k127_5638399_0 FAD dependent oxidoreductase K15736 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 440.0
YYD2_k127_5638399_1 Protein of unknown function (DUF790) K09744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006922 387.0
YYD2_k127_5638399_2 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000007476 195.0
YYD2_k127_5640363_0 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000008235 221.0
YYD2_k127_5640363_1 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000004207 187.0
YYD2_k127_5640363_2 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000215 172.0
YYD2_k127_5640363_3 Methyltransferase type 11 K07755 - 2.1.1.137 0.000000000000000000000000000000000000154 145.0
YYD2_k127_5656267_0 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004654 256.0
YYD2_k127_5656267_1 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000000000000000000000000749 170.0
YYD2_k127_5656267_2 Located at the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.0000000000000000000000000000005715 126.0
YYD2_k127_5656267_3 Belongs to the eukaryotic ribosomal protein eS4 family K02987 - - 0.00000000000000000000000000001154 123.0
YYD2_k127_5656267_4 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03538 GO:0000172,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005732,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030677,GO:0032991,GO:0033204,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.00000004397 59.0
YYD2_k127_56594_0 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 371.0
YYD2_k127_56594_1 Chlorite dismutase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005488 272.0
YYD2_k127_56594_2 Domain of unknown function (DUF1802) - - - 0.000000000000000000000000000000000000000000000000001033 189.0
YYD2_k127_5688210_0 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 402.0
YYD2_k127_5688210_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009857 291.0
YYD2_k127_5688210_2 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02322 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000004861 198.0
YYD2_k127_5688210_3 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.000000000000000003183 87.0
YYD2_k127_5696472_0 PHP-associated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 374.0
YYD2_k127_5696472_1 Phosphate uptake regulator - - - 0.000000000000000000001276 97.0
YYD2_k127_5696472_2 Staphylococcal nuclease homologue - - - 0.000000000000000000002405 101.0
YYD2_k127_5696472_3 TPR repeat-containing protein - - - 0.000000000000000001659 92.0
YYD2_k127_5719899_0 PFAM Ammonia monooxygenase methane monooxygenase, subunit C K10946 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008265 376.0
YYD2_k127_5719899_1 thymidylate kinase K00943 - 2.7.4.9 0.0000000000000000002001 89.0
YYD2_k127_5719899_2 AAA family ATPase, CDC48 subfamily K13525 - - 0.000004523 57.0
YYD2_k127_5729927_0 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000001794 237.0
YYD2_k127_5729927_1 - - - - 0.0000000000000000003202 88.0
YYD2_k127_5729927_2 ribosomal protein K02962 - - 0.0000000000001219 72.0
YYD2_k127_5737359_0 Anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 450.0
YYD2_k127_5737359_1 conserved protein implicated in secretion - - - 0.0000000000000000000000000000000001562 140.0
YYD2_k127_573812_0 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 5.285e-271 841.0
YYD2_k127_573812_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 340.0
YYD2_k127_573812_2 Transketolase K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009252 317.0
YYD2_k127_573812_3 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000005047 190.0
YYD2_k127_573812_4 Belongs to the TPP enzyme family K00156,K00158 - 1.2.3.3,1.2.5.1 0.0000000000000887 73.0
YYD2_k127_574237_0 MGS-like domain K01955 - 6.3.5.5 0.0 1232.0
YYD2_k127_574237_1 Calcineurin-like phosphoesterase K06953 - - 0.000000000000000000000000000000000000000000000000000000000000000001391 235.0
YYD2_k127_574237_2 THUMP domain K06963 - - 0.00000000000000000000000000000000000000000002246 167.0
YYD2_k127_574237_3 Transcriptional regulator - - - 0.0000000000000004479 80.0
YYD2_k127_579208_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006842 389.0
YYD2_k127_579208_1 Catalyzes the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP. Also has an independent pyrophosphate phosphohydrolase activity K08096 - 3.5.4.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000005414 268.0
YYD2_k127_579208_2 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K02858 - 4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000006949 267.0
YYD2_k127_579208_3 RibD C-terminal domain K14654 - 1.1.1.302 0.00000000000000000000000000000000000000000000000000000000002559 212.0
YYD2_k127_579208_4 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000005507 153.0
YYD2_k127_579208_5 riboflavin synthase, alpha K00793 - 2.5.1.9 0.0000000003787 61.0
YYD2_k127_580057_0 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 2.168e-208 662.0
YYD2_k127_580057_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K09482 - 6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002572 376.0
YYD2_k127_580057_2 factor TFIIB K03124 - - 0.000000000000000000000000234 106.0
YYD2_k127_580057_3 S25 ribosomal protein K02975 - - 0.0000000000000000001281 93.0
YYD2_k127_5824984_0 methylase K00571 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 378.0
YYD2_k127_5824984_1 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000000000002509 181.0
YYD2_k127_5824984_2 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000557 181.0
YYD2_k127_5824984_3 Protocatechuate 3,4-dioxygenase beta subunit - - - 0.00000000000000000003351 94.0
YYD2_k127_5824984_4 Belongs to the thioredoxin family K03671 - - 0.0000009194 55.0
YYD2_k127_5868195_0 PAC2 family K06869 - - 0.00000000000000000000000000000000000000000000000000000000001136 214.0
YYD2_k127_5868195_1 - - - - 0.000000000000000000000000000000000000000178 156.0
YYD2_k127_5868195_2 - - - - 0.00000000000000000000000000000000005296 136.0
YYD2_k127_5868195_4 Transcriptional regulator - - - 0.000000000001221 72.0
YYD2_k127_5890299_0 Belongs to the complex I 20 kDa subunit family K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008067 329.0
YYD2_k127_5890299_1 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000002023 182.0
YYD2_k127_5910273_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains K17830 - 1.3.1.101,1.3.7.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006305 456.0
YYD2_k127_5910273_1 alginic acid biosynthetic process K09483 - 4.2.1.118 0.000000000002529 76.0
YYD2_k127_5920385_0 MiaB-like tRNA modifying enzyme K15865 - 2.8.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 511.0
YYD2_k127_5944487_0 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 322.0
YYD2_k127_5944487_1 - - - - 0.0000000000000000000000000000000000000000000000004127 186.0
YYD2_k127_5944487_2 COG1522 Transcriptional regulators - - - 0.0000000000000000000000000000000000002838 141.0
YYD2_k127_5960473_0 Coenzyme A transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007086 511.0
YYD2_k127_6016384_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K03231 - - 9.251e-246 763.0
YYD2_k127_6016384_1 Periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007258 314.0
YYD2_k127_6016384_2 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000000000000000000001442 189.0
YYD2_k127_6016384_3 TIGRFAM Mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000001048 145.0
YYD2_k127_6021562_0 Radical SAM - - - 2.604e-310 955.0
YYD2_k127_6021562_1 oxidoreductase FAD NAD(P)-binding K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 489.0
YYD2_k127_6021562_2 - - - - 0.000000000000000000000000000000000000000000002796 166.0
YYD2_k127_6021562_3 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase - - - 0.000000000000000000000000001466 112.0
YYD2_k127_6039806_0 Binds the lower part of the 30S subunit head K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003813 280.0
YYD2_k127_6039806_1 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001279 250.0
YYD2_k127_6039806_2 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000000000000000000000000000000000005584 226.0
YYD2_k127_6039806_3 Ribosomal protein L4 K02930 - - 0.000000000000000000000000000000000000000000000000000002672 196.0
YYD2_k127_6039806_4 Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome K02892 - - 0.000000000000000000000001437 105.0
YYD2_k127_6039806_5 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000000000001002 84.0
YYD2_k127_6044960_0 PFAM Ion transport K10716 GO:0003674,GO:0005215,GO:0005216,GO:0005244,GO:0005249,GO:0005261,GO:0005267,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015267,GO:0015318,GO:0015672,GO:0016020,GO:0016021,GO:0022803,GO:0022832,GO:0022836,GO:0022838,GO:0022839,GO:0022843,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0034220,GO:0042802,GO:0044425,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098660,GO:0098662 - 0.0000000000000000000001159 107.0
YYD2_k127_6088586_0 PFAM Cl- channel voltage-gated family protein K03281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 462.0
YYD2_k127_6088586_1 nitrite reductase [NAD(P)H] activity K00158,K03809 - 1.2.3.3,1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 441.0
YYD2_k127_6088586_2 riboflavin synthase, alpha K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000003771 217.0
YYD2_k127_6088586_3 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K02858 - 4.1.99.12 0.0000000000000000000000000000000000000000003066 162.0
YYD2_k127_6125531_0 NAD-dependent epimerase dehydratase K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 291.0
YYD2_k127_6125531_1 Cobalamin B12-binding domain protein K16955,K22491 - - 0.0000000000000000000000000000000000000000001781 165.0
YYD2_k127_6144297_0 PFAM 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006432 333.0
YYD2_k127_6144297_1 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000009171 229.0
YYD2_k127_6144297_2 Hemerythrin HHE cation binding K07322 - - 0.000000000000000000000000000000000000000000000000000000009212 202.0
YYD2_k127_6144297_3 PFAM CBS domain containing protein - - - 0.0000001528 55.0
YYD2_k127_6144297_4 Purple acid Phosphatase, N-terminal domain - - - 0.000005406 57.0
YYD2_k127_6174738_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000002895 78.0
YYD2_k127_6183169_0 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 393.0
YYD2_k127_6183169_1 Conserved hypothetical ATP binding protein K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 317.0
YYD2_k127_6183169_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 293.0
YYD2_k127_6183169_3 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000125 185.0
YYD2_k127_6183169_4 - - - - 0.0000000000000000000000000000000000000000001102 163.0
YYD2_k127_6183169_5 CBS domain - - - 0.000000000005727 74.0
YYD2_k127_6186801_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000573 375.0
YYD2_k127_6186801_1 - - - - 0.000000000000000000000000000000000000000000000000000000000004101 213.0
YYD2_k127_6186801_2 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04797 - - 0.000000000000000000000000000000001431 135.0
YYD2_k127_6186801_3 phosphohydrolase (DHH superfamily) K07097 - - 0.0000004986 51.0
YYD2_k127_6205528_0 KAP P-loop domain protein - - - 0.00000000000000000000000000000000000000001815 175.0
YYD2_k127_6205528_1 Glyoxalase-like domain K01759 - 4.4.1.5 0.0000000000000000000000000001221 119.0
YYD2_k127_6205528_2 Thiamine-binding protein - - - 0.000000000000000001129 89.0
YYD2_k127_6205528_3 PFAM Protein kinase domain - - - 0.00000000000000000359 92.0
YYD2_k127_6207969_0 aspartate ornithine carbamoyltransferase carbamoyl-P binding domain K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003982 358.0
YYD2_k127_6207969_1 argininosuccinate lyase K01755 - 4.3.2.1 0.0000001064 58.0
YYD2_k127_6215735_0 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.5.1.5 9.965e-282 875.0
YYD2_k127_6215735_1 Urease beta subunit K01429 - 3.5.1.5 0.0000000000000000000000000000000000000000002592 160.0
YYD2_k127_6215735_2 (urease) gamma subunit K01430 - 3.5.1.5 0.0000000000000000000000000000000000007348 139.0
YYD2_k127_6229752_0 PP-loop family - - - 0.0000000000000000000000000000000000000000003131 161.0
YYD2_k127_6229752_1 helix_turn_helix ASNC type K03718 - - 0.00000000000000000000006374 104.0
YYD2_k127_6229752_2 - - - - 0.0000000000000001012 80.0
YYD2_k127_6229752_3 Bifunctional uroporphyrinogen-III synthetase response regulator domain protein K01719 - 4.2.1.75 0.0000000002111 68.0
YYD2_k127_6240427_0 Mannosyl-3-phosphoglycerate synthase K05947 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.217 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004957 435.0
YYD2_k127_6240427_1 Rieske 2Fe-2S K05710 - - 0.000000000000000000000000000000000000001292 149.0
YYD2_k127_6259373_0 Belongs to the ribosomal protein L31e family K02910 - - 0.000000000000000000000000000001369 123.0
YYD2_k127_6259373_1 RNA-binding protein contains TRAM domain - - - 0.000000000000000000000000001578 115.0
YYD2_k127_6259373_2 Belongs to the eukaryotic ribosomal protein eL39 family K02924 - - 0.0000000000000000006938 87.0
YYD2_k127_6259373_4 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.000000001132 60.0
YYD2_k127_6259373_5 Cupredoxin-like domain - - - 0.00002855 51.0
YYD2_k127_626834_0 - - - - 0.00000000000000000009335 91.0
YYD2_k127_626834_1 PFAM F5 8 type C domain - - - 0.00009995 54.0
YYD2_k127_6286270_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 604.0
YYD2_k127_6286270_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 567.0
YYD2_k127_6286270_2 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K09759 - 6.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 471.0
YYD2_k127_6286270_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0005261 46.0
YYD2_k127_6286736_0 Aldo/keto reductase family - - - 0.000000000000000000001808 94.0
YYD2_k127_6286736_1 PFAM Multicopper oxidase - - - 0.00000000000003656 73.0
YYD2_k127_635004_0 AAA domain (Cdc48 subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003242 604.0
YYD2_k127_635004_1 transcriptional - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007513 287.0
YYD2_k127_635004_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000003043 241.0
YYD2_k127_636321_0 Carbon-nitrogen hydrolase K11206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 308.0
YYD2_k127_636321_2 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0000000000001135 79.0
YYD2_k127_636321_3 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.00000000006249 70.0
YYD2_k127_6368773_0 cation diffusion facilitator family transporter K16264 - - 0.000000000000000000000000000000000000000000000000000000000000002306 222.0
YYD2_k127_6368846_0 Ammonium Transporter K03320 - - 1.673e-211 662.0
YYD2_k127_6368846_1 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000006244 232.0
YYD2_k127_6368846_2 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000002638 186.0
YYD2_k127_6368846_3 Protein of unknown function (DUF1428) - - - 0.00000000000000000000000000000000000000000000002403 173.0
YYD2_k127_6368846_4 Lysine exporter protein LysE YggA - - - 0.000000000000000000000000000000000000002211 154.0
YYD2_k127_6368846_5 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000000000104 132.0
YYD2_k127_6368846_6 Purple acid Phosphatase, N-terminal domain - - - 0.00000000000000000001042 107.0
YYD2_k127_6368846_7 Phosphate transporter family K03306 - - 0.00000000000000001554 83.0
YYD2_k127_6368846_8 - - - - 0.00000000000002209 80.0
YYD2_k127_6368846_9 polysaccharide catabolic process K01179 - 3.2.1.4 0.0007961 48.0
YYD2_k127_6382689_0 Replication factor C K04801 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 303.0
YYD2_k127_6382689_1 GTP cyclohydrolase I K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001008 278.0
YYD2_k127_6382689_2 Belongs to the class-I aminoacyl-tRNA synthetase family - - - 0.00000000000000000000000000000000000000001285 154.0
YYD2_k127_6382689_3 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000006113 109.0
YYD2_k127_6422046_0 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000005629 198.0
YYD2_k127_6423901_0 S-adenosylmethionine synthetase K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007918 580.0
YYD2_k127_6423901_1 Rio2, N-terminal K07179 - 2.7.11.1 0.0000000000000000000000000000000000000000001588 168.0
YYD2_k127_6427685_0 Glycosyl transferase family 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 299.0
YYD2_k127_6427685_1 archaeal coiled-coil protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003294 296.0
YYD2_k127_6427685_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000004017 224.0
YYD2_k127_6427685_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function - - - 0.00000000000000000000000000000000000000000000000000000000000001784 223.0
YYD2_k127_6427685_4 AMMECR1 K09141 - - 0.00000000000000000000000000000000000000000000000000202 188.0
YYD2_k127_647162_0 Siphovirus ReqiPepy6 Gp37-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004625 357.0
YYD2_k127_647162_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006633 245.0
YYD2_k127_647162_2 Phage tail protein - - - 0.00000000000000000000000000000000000000000000000000000000789 203.0
YYD2_k127_647162_3 COG NOG18825 non supervised orthologous group - - - 0.0000000000000000000000000000000000000000000000000002178 199.0
YYD2_k127_647162_4 - - - - 0.0000000000000000000000000000001374 126.0
YYD2_k127_647162_5 Putative phage holin Dp-1 - - - 0.00000000000000000000001933 101.0
YYD2_k127_647162_6 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.0001032 45.0
YYD2_k127_660537_0 FeS assembly protein SufD K09014,K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006747 563.0
YYD2_k127_660537_1 Ribosomal protein L15E K02877 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009738 239.0
YYD2_k127_660537_2 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000003503 222.0
YYD2_k127_660537_3 Signal peptidase K13280 - 3.4.21.89 0.000000000000000000000000000000000003554 143.0
YYD2_k127_660537_4 of nitrite reductase and ring-hydroxylating K05710 - - 0.000000000000000000000000000000007905 129.0
YYD2_k127_660537_5 - - - - 0.00000000000000000000000000308 116.0
YYD2_k127_660537_6 pyrroloquinoline quinone binding - - - 0.000003697 53.0
YYD2_k127_666431_0 Predicted membrane protein (DUF2070) K08979 - - 0.000000000000000000000000000000000000000000000000005138 188.0
YYD2_k127_666431_1 Sec61beta family - - - 0.000000000000000000176 88.0
YYD2_k127_666431_2 Belongs to the SUI1 family K03113 - - 0.0000000000002151 71.0
YYD2_k127_666431_3 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) K07143 - - 0.000000000001602 72.0
YYD2_k127_679620_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 1.409e-288 899.0
YYD2_k127_679620_1 PFAM NADH Ubiquinone plastoquinone (complex I) K00342,K22180 - 1.1.98.4,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000003801 284.0
YYD2_k127_679620_2 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000323 184.0
YYD2_k127_679620_3 NADH ubiquinone oxidoreductase subunit 11 or 4L (chain K) K00340 - 1.6.5.3 0.0000000000000000000000000000000001072 134.0
YYD2_k127_679620_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K12143 - 1.6.5.3 0.000000006787 58.0
YYD2_k127_680021_0 COG1522 Transcriptional regulators - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000915 491.0
YYD2_k127_680021_1 Prephenate dehydratase K04518 - 4.2.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001662 280.0
YYD2_k127_680021_2 - - - - 0.000007525 49.0
YYD2_k127_687720_0 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases K05710 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 329.0
YYD2_k127_687720_1 Peptidase inhibitor I9 - - - 0.000000000000000000000000000000000000000000000000000000009218 210.0
YYD2_k127_687720_2 response regulator, receiver - - - 0.000000000000433 75.0
YYD2_k127_699682_0 Radical SAM - - - 0.0 1055.0
YYD2_k127_699682_1 small GTP-binding protein K06944 - - 0.00000000000000000000000000000000000000000000000000000008223 201.0
YYD2_k127_699682_2 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000002765 93.0
YYD2_k127_704769_0 small GTP-binding protein K06944 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001099 254.0
YYD2_k127_704769_1 Signal peptidase K13280 - 3.4.21.89 0.00000000000000000000000000000000000746 142.0
YYD2_k127_704769_2 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000036 110.0
YYD2_k127_716400_0 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 2.11e-260 810.0
YYD2_k127_716400_1 NADH ubiquinone oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000003435 207.0
YYD2_k127_716400_2 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000000000000000000000000000001493 192.0
YYD2_k127_722349_0 DNA polymerase elongation subunit (Family B) K02319 - 2.7.7.7 1.053e-256 811.0
YYD2_k127_722349_1 Pirin C-terminal cupin domain K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 381.0
YYD2_k127_722349_2 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000003403 230.0
YYD2_k127_722349_3 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 - - 0.0000000000000000000002275 107.0
YYD2_k127_722349_4 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.0000000000000000000002402 99.0
YYD2_k127_722349_5 - - - - 0.00000000000000000004554 92.0
YYD2_k127_722349_6 - - - - 0.000000000002549 72.0
YYD2_k127_722349_7 - - - - 0.000000000003837 69.0
YYD2_k127_728167_0 DNA primase K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 561.0
YYD2_k127_728167_1 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005846 329.0
YYD2_k127_728167_2 Domain of unknown function DUF120 K07732 - 2.7.1.161 0.00000000000000000000000000000000000000000000000000000000000000000002521 239.0
YYD2_k127_728167_3 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) - - - 0.0000000000000000000000000000000000000000000000000000000005462 203.0
YYD2_k127_728167_4 Cytidylyltransferase-like K00980,K14656 - 2.7.7.2,2.7.7.39 0.00000000000000000000000000000000000001773 145.0
YYD2_k127_728167_5 JAB/MPN domain - - - 0.0000000000000001633 85.0
YYD2_k127_743759_0 Formyl transferase K01433 - 3.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 328.0
YYD2_k127_743759_1 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000002418 193.0
YYD2_k127_748166_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.000000000000000000000000000000000000000000000000000000000000004321 228.0
YYD2_k127_748166_1 Cobalt chelatase (CbiK) K06042 - 5.4.99.60,5.4.99.61 0.000000000000000000000000000000000000000004287 158.0
YYD2_k127_759571_0 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000001169 193.0
YYD2_k127_759571_1 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000002525 171.0
YYD2_k127_760949_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 490.0
YYD2_k127_760949_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03041 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 331.0
YYD2_k127_760949_2 ATPase family associated with various cellular activities (AAA) K04800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009585 325.0
YYD2_k127_760949_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004955 308.0
YYD2_k127_760949_4 With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002715 259.0
YYD2_k127_760949_5 Participates in transcription termination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000363 214.0
YYD2_k127_768162_1 - - - - 0.000000000000614 72.0
YYD2_k127_769314_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665,K06883 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0043021,GO:0043022,GO:0044424,GO:0044464,GO:0044877 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003844 416.0
YYD2_k127_772132_0 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000001473 123.0
YYD2_k127_77562_0 TIGRFAM poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 525.0
YYD2_k127_77562_1 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 313.0
YYD2_k127_77562_2 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000004204 213.0
YYD2_k127_77562_4 COG2002 Regulators of stationary sporulation gene expression - - - 0.000000000000000000000000000004064 122.0
YYD2_k127_77562_5 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) - - - 0.00000000000000000000000000006779 122.0
YYD2_k127_77562_6 Peptidase family M50 - - - 0.0000598 46.0
YYD2_k127_796947_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008355 355.0
YYD2_k127_796947_1 ferredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 290.0
YYD2_k127_796947_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000001815 205.0
YYD2_k127_796947_3 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000001549 186.0
YYD2_k127_796947_4 Phenylalanyl-tRNA synthetase alpha subunit K01889 - 6.1.1.20 0.00000000000000000000000000000000000003345 148.0
YYD2_k127_796947_5 Cytidylyltransferase-like K02201 - 2.7.7.3 0.00000000000000000000000000000000002956 139.0
YYD2_k127_796947_6 Phenylalanyl-tRNA synthetase alpha subunit K01889 - 6.1.1.20 0.000000000001068 74.0
YYD2_k127_796947_7 - - - - 0.000000004215 63.0
YYD2_k127_808672_0 PFAM tRNA synthetases class I (C) catalytic domain K01883 - 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 550.0
YYD2_k127_808672_1 - - - - 0.00000000000002585 79.0
YYD2_k127_810068_0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain K01251 - 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 471.0
YYD2_k127_810068_1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases K00363,K15762 - 1.7.1.15 0.00000000000000000000000000000000000000002291 154.0
YYD2_k127_810068_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000143 143.0
YYD2_k127_812495_0 Methionine synthase K00548 - 2.1.1.13 1.657e-282 880.0
YYD2_k127_812495_1 homocysteine S-methyltransferase K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009685 479.0
YYD2_k127_812495_2 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 291.0
YYD2_k127_812495_3 - - - - 0.0000000000000000000000000165 115.0
YYD2_k127_825003_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000543 362.0
YYD2_k127_825003_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 357.0
YYD2_k127_825003_2 - - - - 0.00000000000000000000000000000000000000001348 158.0
YYD2_k127_825003_3 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000005919 126.0
YYD2_k127_825003_4 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000207 91.0
YYD2_k127_825003_5 - - - - 0.0000000000000000004006 91.0
YYD2_k127_833652_0 geranylgeranyl reductase K17830 - 1.3.1.101,1.3.7.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 433.0
YYD2_k127_833652_1 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 3 K00330 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000005376 213.0
YYD2_k127_833652_2 Belongs to the complex I 20 kDa subunit family K00331 - 1.6.5.3 0.0000000000000000003356 87.0
YYD2_k127_845658_0 Domain of unknown function (DUF1297) K06863 - 6.3.4.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 440.0
YYD2_k127_845658_1 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 398.0
YYD2_k127_845658_2 PFAM Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007444 327.0
YYD2_k127_845658_3 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 323.0
YYD2_k127_845658_4 - - - - 0.0000000000000000000000000000000000004878 154.0
YYD2_k127_845658_5 mttA/Hcf106 family K03116 - - 0.0000000000000000000000000005815 116.0
YYD2_k127_845658_6 - - - - 0.0000000000000000000007789 98.0
YYD2_k127_845658_7 - - - - 0.0000000000000000002291 92.0
YYD2_k127_845658_8 - - - - 0.0000000000000002072 83.0
YYD2_k127_850329_0 Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into K04799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 400.0
YYD2_k127_850329_1 NADH ubiquinone oxidoreductase - - - 0.0000000000000000000000000000000000000000001395 158.0
YYD2_k127_850329_2 - - - - 0.000000000000000000000433 98.0
YYD2_k127_850329_3 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.000000000000000001682 86.0
YYD2_k127_889436_0 ABC-type transport system, involved in lipoprotein release, permease component K02004 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 494.0
YYD2_k127_889436_1 extracellular matrix structural constituent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 319.0
YYD2_k127_889436_2 ABC-type antimicrobial peptide transport system, ATPase component K02003,K09810 - - 0.00000000000000000000000000000000003053 135.0
YYD2_k127_891644_0 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003427 277.0
YYD2_k127_891644_3 AMP binding - - - 0.000000000001367 74.0
YYD2_k127_901001_0 Translation initiation factor 2, alpha subunit K03237 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 324.0
YYD2_k127_901001_1 ATP corrinoid adenosyltransferase K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000001049 198.0
YYD2_k127_901001_2 more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA K11130 - - 0.000000000000001371 77.0
YYD2_k127_922910_0 F5/8 type C domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000003396 251.0
YYD2_k127_922910_1 Calcineurin-like phosphoesterase - - - 0.000000000000000000004502 108.0
YYD2_k127_924069_0 Purple acid Phosphatase, N-terminal domain - - - 0.000000000000000000000008977 113.0
YYD2_k127_924069_1 zinc finger - - - 0.00000000002265 64.0
YYD2_k127_944908_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004377 436.0
YYD2_k127_944908_1 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 318.0
YYD2_k127_96260_0 Fibronectin-binding protein A N-terminus (FbpA) - - - 9.673e-197 631.0
YYD2_k127_96260_1 Tetrapyrrole (Corrin/Porphyrin) Methylases K05936 - 2.1.1.133,2.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 399.0
YYD2_k127_96260_2 Tetrapyrrole (Corrin/Porphyrin) Methylases K03394 - 2.1.1.130,2.1.1.151 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 307.0
YYD2_k127_96260_3 Catalyzes the methylation of C-15 in cobalt-precorrin-6B followed by the decarboxylation of C-12 to form cobalt-precorrin- 7 K02191 - 2.1.1.196 0.0000000000000000000000000000000000000000000000000000000000000000000000000001727 261.0
YYD2_k127_96260_5 - - - - 0.00000000000000000000000769 104.0
YYD2_k127_96260_7 - - - - 0.00000000003845 66.0
YYD2_k127_96625_0 Histone acetyltransferase K07739 - 2.3.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 422.0
YYD2_k127_969435_0 required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 348.0
YYD2_k127_969435_1 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.00000000000000000000000000000000000000000000000000000000004719 213.0
YYD2_k127_969435_2 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000002796 118.0
YYD2_k127_969435_3 Transcriptional regulator - - - 0.0000000000000000000000004179 108.0
YYD2_k127_969435_4 Belongs to the class-I aminoacyl-tRNA synthetase family - - - 0.000000000002534 68.0
YYD2_k127_969435_6 Histidine kinase - - - 0.000000000421 66.0
YYD2_k127_974002_0 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001433 245.0
YYD2_k127_974002_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000232 182.0
YYD2_k127_984065_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.811e-197 631.0
YYD2_k127_984065_1 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 498.0
YYD2_k127_984065_2 Amino acid kinase family K06981 - 2.7.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007167 273.0
YYD2_k127_984065_3 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000002286 221.0
YYD2_k127_984065_4 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase - - - 0.00000000000005867 73.0
YYD2_k127_99499_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 497.0
YYD2_k127_99499_1 Belongs to the glutamate synthase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001359 261.0