logo

Overview

ID MAG04641
Name YYD2_bin.4
Sample SMP0125
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Blastocatellia
Order Pyrinomonadales
Family Pyrinomonadaceae
Genus PSRF01
Species
Assembly information
Completeness (%) 71.01
Contamination (%) 3.26
GC content (%) 52.0
N50 (bp) 5,408
Genome size (bp) 3,674,850

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3002

Gene name Description KEGG GOs EC E-value Score Sequence
YYD2_k127_100773_0 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000000000000007959 214.0
YYD2_k127_100773_1 Glycosyl hydrolase-like 10 - - - 0.0000000000000000000000000000000006225 143.0
YYD2_k127_1020642_0 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 2.68e-218 689.0
YYD2_k127_1020642_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004725 497.0
YYD2_k127_1020642_2 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003499 284.0
YYD2_k127_1020642_3 COG1063 Threonine dehydrogenase and related Zn-dependent K00008 - 1.1.1.14 0.000000000000000000000000000000000000009825 149.0
YYD2_k127_1024462_0 Spermine/spermidine synthase domain - - - 1.955e-199 647.0
YYD2_k127_1024462_1 Phosphofructokinase K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002673 305.0
YYD2_k127_1025927_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007675 517.0
YYD2_k127_1025927_1 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000001582 211.0
YYD2_k127_1025927_2 Bacterial regulatory protein, Fis family - - - 0.00001018 53.0
YYD2_k127_1025927_3 - - - - 0.0002146 49.0
YYD2_k127_1025927_4 Peptidase family S41 K03797 - 3.4.21.102 0.0007807 45.0
YYD2_k127_1027259_0 Belongs to the glycosyl hydrolase 2 family K01190 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0004565,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0015925,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 3.2.1.23 2.209e-221 700.0
YYD2_k127_102803_0 beta-lactamase - - - 1.473e-249 794.0
YYD2_k127_102803_1 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 439.0
YYD2_k127_102803_2 chorismate binding enzyme K01665,K03342,K13950 - 2.6.1.85,4.1.3.38 0.00000000000000000000000000000000000000000000002737 177.0
YYD2_k127_1029517_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2017.0
YYD2_k127_1030007_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 6.625e-256 812.0
YYD2_k127_1030007_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 6.589e-224 702.0
YYD2_k127_1030007_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030312,GO:0030554,GO:0031333,GO:0031597,GO:0032271,GO:0032272,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043254,GO:0043335,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0051704,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005905 545.0
YYD2_k127_1030007_3 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 304.0
YYD2_k127_1030007_4 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.00000000000000000000000000000000000000000000000000005481 192.0
YYD2_k127_1030007_5 - - - - 0.0000000000000000000000000000000000007324 149.0
YYD2_k127_1030007_6 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000007794 115.0
YYD2_k127_1030007_7 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009011,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 0.000000000000000002056 89.0
YYD2_k127_1040428_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 1.408e-319 1000.0
YYD2_k127_1041190_0 PFAM type II secretion system protein E K02283,K03609 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007707 567.0
YYD2_k127_1041190_1 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001516 274.0
YYD2_k127_1041190_2 Type II secretion system K12510 - - 0.0000000000000000000000000000000000000000000000000000000000112 220.0
YYD2_k127_1041190_3 Secretion system protein K12511 - - 0.00000000000000000000000000000000000000000000000000000007626 207.0
YYD2_k127_1041190_4 NUBPL iron-transfer P-loop NTPase K02282 - - 0.0000000000000000000000000000000000000000000000001629 192.0
YYD2_k127_1041190_5 repeat-containing protein - - - 0.000000000000000000429 98.0
YYD2_k127_1048568_0 PFAM Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007845 402.0
YYD2_k127_1048568_1 Transmembrane secretion effector - - - 0.0000000000000000000000133 102.0
YYD2_k127_104989_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000006529 230.0
YYD2_k127_104989_1 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000000000004262 188.0
YYD2_k127_104989_2 amine dehydrogenase activity - - - 0.00000003717 64.0
YYD2_k127_104989_3 PFAM Fimbrial assembly family protein K02663 - - 0.0000006146 59.0
YYD2_k127_104989_4 - - - - 0.00003634 54.0
YYD2_k127_1060771_0 Tetratricopeptide repeat K02200 - - 0.0000000000000000000000000000000000000000000000000001249 197.0
YYD2_k127_1060771_1 subunit of a heme lyase K02200 - - 0.0000000000000000000000000000000000000001614 155.0
YYD2_k127_1060771_2 Protein of unknown function (DUF1059) - - - 0.00000000000000001126 84.0
YYD2_k127_1060771_3 Tetratricopeptide repeat - - - 0.00004623 53.0
YYD2_k127_1066085_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 513.0
YYD2_k127_1066085_1 Putative lumazine-binding - - - 0.00000000000000000000000000000000000000000002732 165.0
YYD2_k127_1066085_2 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000001983 159.0
YYD2_k127_1075651_0 PFAM FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 332.0
YYD2_k127_1075651_1 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000002281 260.0
YYD2_k127_1075651_2 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000007795 228.0
YYD2_k127_1075651_3 - - - - 0.00000000000000000000000002694 110.0
YYD2_k127_1075651_4 - - - - 0.0000000801 61.0
YYD2_k127_1088400_0 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814,K05365 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006194 461.0
YYD2_k127_1091492_0 Domain of unknown function (DUF5117) - - - 0.0 1034.0
YYD2_k127_1091492_2 PFAM Peptidase family M23 K21472 - - 0.0000000000000000000000000000000000000000000000003422 183.0
YYD2_k127_1091492_3 lipoprotein localization to outer membrane K02004 - - 0.00000000000000000000000000000000000000000002119 184.0
YYD2_k127_1091492_4 - - - - 0.00000000000000000000000000002954 119.0
YYD2_k127_1091492_5 - - - - 0.000000000000002892 79.0
YYD2_k127_1091492_6 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00003579 57.0
YYD2_k127_1095446_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 1.321e-290 916.0
YYD2_k127_1095446_1 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000004396 218.0
YYD2_k127_1095446_2 Methyltransferase domain - - - 0.00000000006195 72.0
YYD2_k127_1095446_3 Domain of unknown function (DUF4440) - - - 0.0000003422 58.0
YYD2_k127_1095446_4 Domain of unknown function (DUF4440) - - - 0.0005507 48.0
YYD2_k127_1097232_0 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 1.063e-308 957.0
YYD2_k127_1097232_1 Protein of unknown function (DUF541) K09797 - - 0.000000000000000000000000000000000000000000000000000000000000001014 229.0
YYD2_k127_1106326_0 TonB dependent receptor - - - 6.475e-210 698.0
YYD2_k127_1106326_1 Domain of unknown function (DUF1768) - - - 0.000000000000008716 76.0
YYD2_k127_1106326_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000001204 51.0
YYD2_k127_110690_0 Domain of unknown function (DUF1287) K09974 - - 0.00000000000000000000000000000000000000000000000000000000000000006091 232.0
YYD2_k127_110690_2 palmitoyl-(protein) hydrolase activity K06999 - - 0.000000000000000000000000000007641 127.0
YYD2_k127_110690_3 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000004088 110.0
YYD2_k127_110690_4 23S rRNA-intervening sequence protein - - - 0.000000000000000000000005449 105.0
YYD2_k127_110690_5 Protein of unknown function (DUF3443) - - - 0.000002145 53.0
YYD2_k127_1107468_0 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000002271 248.0
YYD2_k127_1107468_1 PQQ enzyme repeat - - - 0.000000000000000000000000000000000000000000000004314 188.0
YYD2_k127_1107468_2 D-alanyl-d-alanine carboxypeptidase K07259 - 3.4.16.4 0.0000000000000000000007112 97.0
YYD2_k127_1107468_3 DinB family - - - 0.0000000002296 68.0
YYD2_k127_1107468_4 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.000000004451 65.0
YYD2_k127_1111880_0 Phosphate acyltransferases K01897 - 6.2.1.3 1.831e-207 671.0
YYD2_k127_1111880_1 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 469.0
YYD2_k127_1111880_2 Uncharacterized protein conserved in bacteria (DUF2199) - - - 0.0000000000000000000000000000000004393 142.0
YYD2_k127_1117121_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 419.0
YYD2_k127_1117121_1 Belongs to the peptidase S8 family K08651 - 3.4.21.66 0.0000000000000000000000000000000000000000000000000000000000002621 226.0
YYD2_k127_1117121_2 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000001938 213.0
YYD2_k127_1117121_3 Ferritin-like domain K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000004717 205.0
YYD2_k127_1117121_4 Amidinotransferase K01482 - 3.5.3.18 0.000000000000000000000000000000000000000000000000000003132 204.0
YYD2_k127_1117121_5 transglycosylase - - - 0.000000000000000005159 84.0
YYD2_k127_1135750_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 383.0
YYD2_k127_1135750_1 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000009338 189.0
YYD2_k127_1135750_2 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.000000000002678 70.0
YYD2_k127_1139943_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003045 473.0
YYD2_k127_1146966_0 cellulose binding - - - 1.169e-278 872.0
YYD2_k127_1146966_1 Glycosyl hydrolase family 92 - - - 0.0000000000000000000000000000000000000000000243 166.0
YYD2_k127_1155128_0 UDP binding domain K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003579 561.0
YYD2_k127_1155128_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 376.0
YYD2_k127_1155128_2 NAD(P)H-binding K01784,K02473 - 5.1.3.2,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 354.0
YYD2_k127_1155128_3 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000006508 269.0
YYD2_k127_1155128_4 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000009194 225.0
YYD2_k127_1163981_0 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007054 475.0
YYD2_k127_1163981_1 PFAM von Willebrand factor type A - - - 0.000000000000000000000000000000001088 144.0
YYD2_k127_1163981_2 - - - - 0.00000000000000000000000008239 123.0
YYD2_k127_1163981_3 Phytanoyl-CoA dioxygenase (PhyH) K00477 - 1.14.11.18 0.00000000000002155 74.0
YYD2_k127_1163981_4 Peptidase, M16 - - - 0.00000000007776 75.0
YYD2_k127_1163981_5 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.000000002678 61.0
YYD2_k127_1172864_0 - - - - 0.0000000000000000000005754 109.0
YYD2_k127_1172864_1 phosphorelay signal transduction system K02481 - - 0.0003797 46.0
YYD2_k127_1176801_0 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004339 539.0
YYD2_k127_1176801_1 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 528.0
YYD2_k127_1176801_2 - - - - 0.00000000000000000000000000000000000000000000003084 178.0
YYD2_k127_1176801_3 - K02172 - - 0.0000001662 60.0
YYD2_k127_1194448_0 serine-type peptidase activity - - - 0.0 1088.0
YYD2_k127_1194448_1 Glycosyl hydrolase family 92 - - - 5.519e-279 881.0
YYD2_k127_1194448_2 peptidyl-tyrosine sulfation K03217,K06872 - - 0.0000000000000000001785 98.0
YYD2_k127_1199297_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679,K01744 - 4.2.1.2,4.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 610.0
YYD2_k127_1199297_1 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000002736 141.0
YYD2_k127_1199297_2 Protein of unknown function (DUF541) K09807 - - 0.000000000000000000000000000654 123.0
YYD2_k127_1199297_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000001023 124.0
YYD2_k127_1199297_4 4Fe-4S single cluster domain of Ferredoxin I - - - 0.000000000000000000000000004425 112.0
YYD2_k127_1199297_5 Rieske-like [2Fe-2S] domain K05710 - - 0.000000000000000003447 90.0
YYD2_k127_1199297_6 KaiC K08482 - - 0.000000000000000004005 86.0
YYD2_k127_119992_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000003702 229.0
YYD2_k127_119992_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000001911 165.0
YYD2_k127_119992_2 Involved in the TonB-independent uptake of proteins K03641 - - 0.0000000000000000000000000000000215 145.0
YYD2_k127_119992_3 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000007334 117.0
YYD2_k127_1200691_0 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 545.0
YYD2_k127_1205851_0 TIGRFAM galactose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 463.0
YYD2_k127_1205851_1 inositol monophosphate 1-phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000334 408.0
YYD2_k127_1205851_2 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 405.0
YYD2_k127_1205851_3 transporter K10441 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006855 279.0
YYD2_k127_1214387_0 Dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 399.0
YYD2_k127_1214387_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 323.0
YYD2_k127_1214387_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000009633 104.0
YYD2_k127_1214387_3 DSHCT - - - 0.0000004544 54.0
YYD2_k127_1233180_0 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008255 406.0
YYD2_k127_1233180_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003831 285.0
YYD2_k127_1233180_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003378 267.0
YYD2_k127_1233180_3 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000001799 208.0
YYD2_k127_1233180_4 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000000000007331 151.0
YYD2_k127_1254670_0 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 1.974e-228 717.0
YYD2_k127_1254670_1 Protein tyrosine kinase K08884 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000001898 248.0
YYD2_k127_1254670_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000001896 207.0
YYD2_k127_1254670_3 - - - - 0.000000000000000201 79.0
YYD2_k127_1260575_0 FtsX-like permease family - - - 3.294e-213 702.0
YYD2_k127_1260575_1 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K02003,K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001248 276.0
YYD2_k127_1260575_2 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007116 269.0
YYD2_k127_1260575_3 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000005197 214.0
YYD2_k127_1262844_0 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000006151 189.0
YYD2_k127_1262844_1 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000006699 180.0
YYD2_k127_1262844_2 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000002396 112.0
YYD2_k127_1281100_0 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000007446 143.0
YYD2_k127_1281100_1 Domain of unknown function (DUF4349) - - - 0.0009356 49.0
YYD2_k127_1282922_0 COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component K09014 - - 7.643e-207 646.0
YYD2_k127_1282922_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 587.0
YYD2_k127_1282922_2 COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 392.0
YYD2_k127_1282922_3 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 359.0
YYD2_k127_1292792_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 308.0
YYD2_k127_1292792_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004681 296.0
YYD2_k127_1297574_0 metallocarboxypeptidase activity K14054 - - 4.355e-253 806.0
YYD2_k127_1297574_1 Belongs to the UPF0502 family K09915 - - 0.0000000000000000000000000000000000000000000000000000000002234 210.0
YYD2_k127_1303585_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006386 472.0
YYD2_k127_1303585_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001056 278.0
YYD2_k127_1303585_2 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00000000000003782 73.0
YYD2_k127_1312184_0 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 572.0
YYD2_k127_1312184_1 Aminotransferase class-III K00823 - 2.6.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 497.0
YYD2_k127_1312184_2 Amidohydrolase family K12960,K20810 - 3.5.4.28,3.5.4.31,3.5.4.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004686 316.0
YYD2_k127_1312184_3 Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine 7-oxoG) from DNA. Also nicks DNA at apurinic apyrimidinic sites (AP sites) K03653 - 4.2.99.18 0.00000000000000000000000000005351 121.0
YYD2_k127_1312184_4 Transglycosylase SLT domain K08309 - - 0.000000000000000000000000000967 119.0
YYD2_k127_1312184_5 PIN domain - - - 0.000000000000000000000001264 109.0
YYD2_k127_1312184_6 gag-polyprotein putative aspartyl protease - - - 0.0000000003571 73.0
YYD2_k127_1312184_7 Tetratricopeptide TPR_2 repeat protein - - - 0.00000002323 67.0
YYD2_k127_132194_0 40-residue YVTN family beta-propeller repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 314.0
YYD2_k127_132532_0 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000001254 203.0
YYD2_k127_1335858_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002794 568.0
YYD2_k127_1335858_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 539.0
YYD2_k127_1335858_2 chromosome segregation K03497 - - 0.000000000000000000000000000000000000000000000000000000000005055 217.0
YYD2_k127_1335858_3 Cupin domain - - - 0.0000000000005821 76.0
YYD2_k127_1335858_4 Cobyrinic acid ac-diamide synthase K03496 - - 0.0001172 44.0
YYD2_k127_1353939_0 cell shape determining protein MreB K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009709 415.0
YYD2_k127_1353939_1 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 0.0000000000000000000000000000000001004 141.0
YYD2_k127_1353939_2 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000004503 130.0
YYD2_k127_1353939_3 shape-determining protein MreD K03571 - - 0.000006199 56.0
YYD2_k127_1357726_0 Aminotransferase class-V K01556 - 3.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004433 355.0
YYD2_k127_1357726_1 amino acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006126 287.0
YYD2_k127_1357726_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000002591 153.0
YYD2_k127_1357726_3 Alkyl hydroperoxide reductase K03564 - 1.11.1.15 0.0000000000000000000000000000000007321 136.0
YYD2_k127_1371634_0 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009396 427.0
YYD2_k127_1371634_1 PFAM thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000001314 228.0
YYD2_k127_1385205_0 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000007503 239.0
YYD2_k127_1385205_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000167 192.0
YYD2_k127_1385205_2 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000002011 179.0
YYD2_k127_1400541_0 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004914 446.0
YYD2_k127_1400541_1 PFAM WD domain, G-beta repeat - - - 0.000000000000000002955 96.0
YYD2_k127_1400684_0 metal-dependent phosphohydrolase, HD sub domain K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 305.0
YYD2_k127_1400684_1 phosphohistidine phosphatase K08296 - - 0.00000000000000000000000000000000006273 140.0
YYD2_k127_1400684_2 PFAM CHAD domain containing protein - - - 0.0000000000000000004262 99.0
YYD2_k127_1400684_3 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000008306 76.0
YYD2_k127_1408641_0 Transport permease protein K01992,K09690 - - 0.0000000000000000000000000000000000000000000000000000000186 208.0
YYD2_k127_1408641_1 - - - - 0.00000007931 62.0
YYD2_k127_1412821_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006961 264.0
YYD2_k127_1412821_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000001313 224.0
YYD2_k127_1412821_2 - - - - 0.00000000000000000000000000000000000000000000000000000001266 203.0
YYD2_k127_1412821_3 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000185 203.0
YYD2_k127_1412821_4 - - - - 0.000000001133 64.0
YYD2_k127_1412821_5 outer membrane autotransporter barrel domain protein - - - 0.0000924 48.0
YYD2_k127_1415411_0 alpha-L-arabinofuranosidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000142 266.0
YYD2_k127_1415411_1 - - - - 0.00001309 53.0
YYD2_k127_1415411_2 Transcriptional regulatory protein, C terminal - - - 0.00001817 50.0
YYD2_k127_141564_0 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000008014 241.0
YYD2_k127_141564_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000001529 229.0
YYD2_k127_141564_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000005824 220.0
YYD2_k127_141564_3 SNARE associated Golgi protein - - - 0.000000000000000000000000000000001431 130.0
YYD2_k127_141564_4 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000000005631 78.0
YYD2_k127_1416095_0 Major facilitator Superfamily K08223 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 382.0
YYD2_k127_1416095_1 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000229 127.0
YYD2_k127_1416095_3 Cupin domain - - - 0.00000001594 59.0
YYD2_k127_1425411_0 peptidase M20 K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 387.0
YYD2_k127_1425411_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007879 322.0
YYD2_k127_1425411_2 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000005307 156.0
YYD2_k127_1425411_3 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000001626 133.0
YYD2_k127_1425411_4 DnaJ (Hsp40) homolog, subfamily C , member 25 K19371 - - 0.00002505 57.0
YYD2_k127_1426461_0 AMP binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004526 249.0
YYD2_k127_1428539_0 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001286 266.0
YYD2_k127_1428539_1 von Willebrand factor, type A - - - 0.0000000004813 70.0
YYD2_k127_1428578_0 Peptidase family S58 K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 496.0
YYD2_k127_1428578_1 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000462 269.0
YYD2_k127_1428578_2 serine-type peptidase activity K01278 - 3.4.14.5 0.000000000000000000000000000000000000000000000000007038 189.0
YYD2_k127_1428578_3 Ion channel - - - 0.000000000000000000000000000000000000000000000212 172.0
YYD2_k127_1428578_4 helix_turn_helix gluconate operon transcriptional repressor K00375,K05825 - - 0.00006424 50.0
YYD2_k127_1429343_0 Belongs to the 5'-nucleotidase family K11751 - 3.1.3.5,3.6.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 529.0
YYD2_k127_1429343_1 photosynthesis - - - 0.00000000000000000000000000000000000005101 145.0
YYD2_k127_1429343_2 dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes - - - 0.00000817 51.0
YYD2_k127_142971_0 Proprotein convertase P-domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009981 330.0
YYD2_k127_142971_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006501 285.0
YYD2_k127_142971_2 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000003581 263.0
YYD2_k127_142971_3 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 0.0000000000000000000000000000000000000000003237 168.0
YYD2_k127_142971_4 Methylates ribosomal protein L11 K02687 - - 0.000000000000000000000000000000000000002065 158.0
YYD2_k127_142971_5 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000000000000000000000002584 134.0
YYD2_k127_142971_6 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000000000000000000000000000000005689 129.0
YYD2_k127_142971_7 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.0000000000000001236 86.0
YYD2_k127_142971_8 Tetratricopeptide repeat - - - 0.0000000000000014 91.0
YYD2_k127_142971_9 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000001497 53.0
YYD2_k127_1431541_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 6.697e-273 848.0
YYD2_k127_1431541_1 Polysulphide reductase, NrfD K00185 - - 1.186e-220 693.0
YYD2_k127_1431541_2 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 362.0
YYD2_k127_1431541_3 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008386 362.0
YYD2_k127_1431541_4 signal sequence binding K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 301.0
YYD2_k127_1431541_5 PFAM cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000001834 243.0
YYD2_k127_1431541_6 Protein of unknown function (DUF3341) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000925 237.0
YYD2_k127_1431541_7 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000005936 202.0
YYD2_k127_1431541_8 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.0000000000005245 71.0
YYD2_k127_1438843_0 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 288.0
YYD2_k127_1438843_1 carboxylic acid catabolic process - - - 0.00000000000000000000000000000000000000000000003803 179.0
YYD2_k127_1438843_2 Amidohydrolase family K06015 - 3.5.1.81 0.0000000000000000000000000000000000002183 147.0
YYD2_k127_1438843_3 PFAM response regulator receiver K11443 - - 0.0000000000000000000001657 102.0
YYD2_k127_1438843_4 - - - - 0.000000000227 71.0
YYD2_k127_1440973_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004993 311.0
YYD2_k127_1440973_1 oxidoreductase activity, acting on CH-OH group of donors K13237 - 1.3.1.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004872 300.0
YYD2_k127_1440973_2 TIGRFAM Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 - 5.3.1.16 0.000000000000000000009382 94.0
YYD2_k127_144558_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 383.0
YYD2_k127_144558_1 RNA polymerase, sigma-24 subunit, ECF subfamily K02405 - - 0.000000000000000000000000000000000000000000000000000000000000004178 221.0
YYD2_k127_1449109_0 Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 2.459e-230 724.0
YYD2_k127_1449109_1 - - - - 0.00001705 56.0
YYD2_k127_1449109_2 Polysaccharide deacetylase - - - 0.00002014 52.0
YYD2_k127_144930_0 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 385.0
YYD2_k127_144930_1 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 355.0
YYD2_k127_144930_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009415 296.0
YYD2_k127_144930_3 aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000003194 263.0
YYD2_k127_1451743_0 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000001022 183.0
YYD2_k127_1451743_1 conserved repeat domain protein - - - 0.000000000000000000000000008066 128.0
YYD2_k127_1451743_2 Parallel beta-helix repeats - - - 0.0000000000000000009866 102.0
YYD2_k127_1451743_3 LssY C-terminus - - - 0.0000007118 61.0
YYD2_k127_1451743_4 - - - - 0.00008598 54.0
YYD2_k127_1457193_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K13810 GO:0003674,GO:0003824,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016832,GO:0019637,GO:0044237,GO:0071704,GO:1901135 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 285.0
YYD2_k127_1457193_1 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005482 277.0
YYD2_k127_1457193_2 Fibronectin type 3 domain - - - 0.0000000000000008845 87.0
YYD2_k127_145831_0 Ndr family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008247 265.0
YYD2_k127_145831_1 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000000000004621 233.0
YYD2_k127_145831_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000003442 231.0
YYD2_k127_145831_3 Thioesterase superfamily K07107 - - 0.00000000000000000000002233 104.0
YYD2_k127_1488971_0 Belongs to the glycosyl hydrolase 67 family K01235 - 3.2.1.139 4.017e-281 882.0
YYD2_k127_1488971_1 Carboxypeptidase regulatory-like domain - - - 1.529e-276 891.0
YYD2_k127_1488971_2 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01706 - 4.2.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 304.0
YYD2_k127_1488971_3 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004619 306.0
YYD2_k127_1488971_4 PFAM ROK family - - - 0.000000001473 61.0
YYD2_k127_1497541_0 beta-N-acetylhexosaminidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 430.0
YYD2_k127_1500055_0 Serine hydrolase (FSH1) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 410.0
YYD2_k127_1500055_1 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004023 370.0
YYD2_k127_1500055_2 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003809 320.0
YYD2_k127_1500055_3 Bacteriocin-protection protein - - - 0.00000000000000000000000000000000000000000000000000000000000004102 219.0
YYD2_k127_1500055_4 -acetyltransferase - - - 0.0000000000000000000000000000000392 126.0
YYD2_k127_1506773_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 577.0
YYD2_k127_1506773_1 tRNA processing K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008305 307.0
YYD2_k127_1506773_2 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000002926 217.0
YYD2_k127_1506773_3 Tetratricopeptide repeat - - - 0.00000005313 65.0
YYD2_k127_1506773_4 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000128 55.0
YYD2_k127_1521040_0 domain protein K14194 - - 0.000000000000000000000004156 118.0
YYD2_k127_1521040_1 CarboxypepD_reg-like domain - - - 0.0000000006357 72.0
YYD2_k127_1521040_2 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000002973 57.0
YYD2_k127_1534178_0 PFAM glycoside hydrolase family 39 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006134 367.0
YYD2_k127_1534178_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000517 229.0
YYD2_k127_1534178_2 DinB family - - - 0.000000000000000000000000000000000000000000000005998 178.0
YYD2_k127_1534178_3 PAS PAC domain-like protein - - - 0.000000000000000000002767 103.0
YYD2_k127_1534178_4 Glycosyl transferase - - - 0.000002332 52.0
YYD2_k127_1543362_0 FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 2.713e-214 675.0
YYD2_k127_1543362_1 ABC-type sugar transport system periplasmic component K10439 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009509 393.0
YYD2_k127_1543362_2 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005261 301.0
YYD2_k127_1543362_3 - - - - 0.000000000000003438 84.0
YYD2_k127_1549413_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 614.0
YYD2_k127_1549413_1 von Willebrand factor (vWF) type A domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008131 454.0
YYD2_k127_1560332_0 COG0635 Coproporphyrinogen III oxidase and related Fe-S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008068 497.0
YYD2_k127_1560332_1 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 411.0
YYD2_k127_1560332_2 COG0644 Dehydrogenases (flavoproteins) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 375.0
YYD2_k127_1560332_3 PQQ-like domain - - - 0.00000000000000000000000000000000000000001412 163.0
YYD2_k127_1567291_0 aminoglycoside hydroxyurea antibiotic resistance kinase K04343 - 2.7.1.72 0.0000000000000000000000000000000000335 145.0
YYD2_k127_1567291_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000001506 135.0
YYD2_k127_157388_0 DEAD DEAH box helicase K03724 - - 0.0 1562.0
YYD2_k127_1582697_0 KaiC K08482 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003952 275.0
YYD2_k127_1582697_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000005634 226.0
YYD2_k127_158303_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 2.285e-255 816.0
YYD2_k127_158303_1 Putative peptidoglycan binding domain - - - 0.0002033 49.0
YYD2_k127_1601289_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K00575 - 2.1.1.80 0.00000000000000000000000000000000000000001571 157.0
YYD2_k127_1601289_1 Histidine kinase K07683 - 2.7.13.3 0.000000000000000000000000000000001509 145.0
YYD2_k127_1601289_2 PFAM Antibiotic biosynthesis monooxygenase - - - 0.000000001044 63.0
YYD2_k127_1601656_0 Wzt C-terminal domain K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 314.0
YYD2_k127_1601656_1 Sulfotransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007822 252.0
YYD2_k127_1601656_2 Mo-molybdopterin cofactor metabolic process - - - 0.00000000000000000000000000000000000000000000000000000003291 207.0
YYD2_k127_1611671_0 Glycine cleavage T-protein C-terminal barrel domain K00605,K06980 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000004005 204.0
YYD2_k127_1611671_1 PFAM Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000003399 149.0
YYD2_k127_1611671_2 PFAM methyltransferase - - - 0.00000000000000000000000000001679 124.0
YYD2_k127_1611671_3 phage Terminase large subunit - - - 0.000000003114 61.0
YYD2_k127_1611846_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 377.0
YYD2_k127_1611846_1 Outer membrane protein (OmpH-like) K06142 - - 0.00000005056 62.0
YYD2_k127_1612022_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 572.0
YYD2_k127_1612022_1 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 316.0
YYD2_k127_1612022_2 metalloendopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000002569 218.0
YYD2_k127_1612022_3 Peptidoglycan-binding domain 1 protein - - - 0.00000000000000000000006187 103.0
YYD2_k127_1612022_4 von Willebrand factor, type A K07114 - - 0.00000000000000002594 94.0
YYD2_k127_1612022_5 - K01387,K06399 - 3.4.21.116,3.4.24.3 0.000000006204 68.0
YYD2_k127_1612022_6 - - - - 0.0000000107 56.0
YYD2_k127_1612022_7 Sh3 type 3 domain protein - - - 0.00000001385 66.0
YYD2_k127_1612022_8 - - - - 0.00000006964 54.0
YYD2_k127_1618602_0 Cys/Met metabolism PLP-dependent enzyme K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008537 495.0
YYD2_k127_1618602_1 Regulatory protein - - - 0.00000000000000000000000001663 113.0
YYD2_k127_1620823_0 Heat shock 70 kDa protein K04043 - - 1.477e-200 633.0
YYD2_k127_1620823_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005579 370.0
YYD2_k127_1620823_2 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000002622 235.0
YYD2_k127_1620823_3 MerR HTH family regulatory protein K13640 - - 0.000000000000000000000000000000000002865 142.0
YYD2_k127_1620823_4 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000002389 105.0
YYD2_k127_1622233_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016020,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0040007,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0055114,GO:0071704,GO:0071944,GO:1901576 2.4.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 545.0
YYD2_k127_1622233_1 Protein of unknown function (DUF1343) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005435 337.0
YYD2_k127_1622233_2 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001676 284.0
YYD2_k127_1622233_3 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000001098 206.0
YYD2_k127_1622233_4 LysR substrate binding domain K21703,K21711 - - 0.0000000000000000000000000000000000000000003923 169.0
YYD2_k127_1622233_5 BadF BadG BcrA BcrD - GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006040,GO:0006044,GO:0006082,GO:0006793,GO:0006796,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0045127,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901071,GO:1901135,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000004133 161.0
YYD2_k127_1622233_6 symporter activity - - - 0.00000007044 56.0
YYD2_k127_1643023_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 351.0
YYD2_k127_1643023_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 338.0
YYD2_k127_1643023_2 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000001239 143.0
YYD2_k127_1669294_0 PrkA AAA domain protein K07180 - - 1.994e-301 938.0
YYD2_k127_1669294_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0031119,GO:0034337,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990481 5.4.99.25 0.000000000000000000000000127 113.0
YYD2_k127_1669294_2 Serine aminopeptidase, S33 K01055 - 3.1.1.24 0.0000000002045 68.0
YYD2_k127_1680821_0 Protein tyrosine kinase - - - 1.06e-216 702.0
YYD2_k127_1680821_1 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 351.0
YYD2_k127_1687543_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 359.0
YYD2_k127_1687543_1 transcriptional regulator (RpiR family) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002255 259.0
YYD2_k127_1687543_2 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000001004 257.0
YYD2_k127_1695187_0 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL K11177 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004551 484.0
YYD2_k127_1695187_1 Glycosyl Hydrolase Family 88 K15532 - 3.2.1.172 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 412.0
YYD2_k127_1695187_2 2Fe-2S -binding K13483 - - 0.000000000000000000000000000000000000000000000000000000003464 205.0
YYD2_k127_1711139_0 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000001628 218.0
YYD2_k127_1711139_1 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000001623 194.0
YYD2_k127_1711139_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000000000001398 182.0
YYD2_k127_1711139_3 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.0000000000000000000000000000000000000000007 161.0
YYD2_k127_1711139_4 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000003322 147.0
YYD2_k127_1711139_5 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000001351 106.0
YYD2_k127_1711139_6 Ribosomal protein L30 K02907 - - 0.00000000000000001131 83.0
YYD2_k127_1711139_7 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0008195 42.0
YYD2_k127_1736088_0 Mur ligase, middle domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000446 266.0
YYD2_k127_1736088_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000001015 204.0
YYD2_k127_1736088_2 Belongs to the Nudix hydrolase family K01515 - 3.6.1.13 0.0000000000000000000000000000000000002622 148.0
YYD2_k127_1740535_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 413.0
YYD2_k127_1740535_1 Cys/Met metabolism PLP-dependent enzyme K01739,K01761 - 2.5.1.48,4.4.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005492 357.0
YYD2_k127_1740535_2 tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000002772 220.0
YYD2_k127_1740535_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000002635 169.0
YYD2_k127_1740535_4 JAB/MPN domain - - - 0.00000000000000000000000001144 111.0
YYD2_k127_1750999_0 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 394.0
YYD2_k127_1750999_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 339.0
YYD2_k127_1750999_2 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006065 305.0
YYD2_k127_1750999_3 3-demethylubiquinone-9 3-O-methyltransferase activity K15257 - - 0.000000000000000000000000000000000000000000004474 175.0
YYD2_k127_1750999_4 lipolytic protein G-D-S-L family - - - 0.0000000000000000004139 98.0
YYD2_k127_1750999_5 Methyltransferase domain - - - 0.0000000000000008557 78.0
YYD2_k127_1750999_6 Glycosyl transferases group 1 - - - 0.00000000004696 75.0
YYD2_k127_1750999_7 Glycosyltransferase like family 2 - - - 0.0000004718 61.0
YYD2_k127_1753687_0 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 621.0
YYD2_k127_1753687_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 528.0
YYD2_k127_1753687_2 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007296 524.0
YYD2_k127_1759672_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 355.0
YYD2_k127_1759672_1 Domain of unknown function (DUF3536) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 299.0
YYD2_k127_1762147_0 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001031 261.0
YYD2_k127_1762147_1 Belongs to the peptidase M10A family K07999 - - 0.000000168 64.0
YYD2_k127_1762147_2 Transport permease protein K09690 - - 0.0003987 44.0
YYD2_k127_1763779_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000003313 255.0
YYD2_k127_1763779_1 - - - - 0.0000000000000000000006487 98.0
YYD2_k127_1787752_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000004143 189.0
YYD2_k127_1787752_1 Transcriptional coactivator pterin dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000000000000000002412 168.0
YYD2_k127_1805040_0 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006695 477.0
YYD2_k127_1805040_1 Cupredoxin-like domain K00376 - 1.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000002757 263.0
YYD2_k127_1854233_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005334 569.0
YYD2_k127_1854233_1 Involved in the tonB-independent uptake of proteins K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000462 465.0
YYD2_k127_1854233_2 Transcriptional regulator K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000763 383.0
YYD2_k127_1854233_3 Putative cyclase - - - 0.0000000008987 62.0
YYD2_k127_1854233_4 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000008282 57.0
YYD2_k127_185978_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 343.0
YYD2_k127_185978_1 Phage integrase, N-terminal SAM-like domain K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001387 270.0
YYD2_k127_1863772_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 309.0
YYD2_k127_1863772_1 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007124 290.0
YYD2_k127_1865921_0 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 343.0
YYD2_k127_1865921_1 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000209 281.0
YYD2_k127_1865921_2 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000001728 203.0
YYD2_k127_1865921_3 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000956 167.0
YYD2_k127_1865921_4 Peptidase family M1 domain - - - 0.0000000000000000000000000000000001152 152.0
YYD2_k127_1865921_5 Domain of unknown function (DUF4112) - - - 0.000000000000000000000000000008855 124.0
YYD2_k127_1865921_7 Polymer-forming cytoskeletal - - - 0.00000000000000003665 89.0
YYD2_k127_1865921_8 Ferric uptake regulator family K09825 - - 0.000000000000008846 76.0
YYD2_k127_1873064_0 MOSC domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 285.0
YYD2_k127_1873064_1 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000009738 124.0
YYD2_k127_1873256_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 2.188e-265 837.0
YYD2_k127_1873256_1 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 554.0
YYD2_k127_1873256_11 FeoA K04758 - - 0.0000000000000002151 82.0
YYD2_k127_1873256_2 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 479.0
YYD2_k127_1873256_3 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 395.0
YYD2_k127_1873256_4 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00018,K00058 - 1.1.1.29,1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 361.0
YYD2_k127_1873256_5 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000005937 230.0
YYD2_k127_1873256_6 peroxiredoxin activity - - - 0.000000000000000000000000000000000000000000001277 171.0
YYD2_k127_1873256_7 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000007157 149.0
YYD2_k127_1873256_8 Amino-transferase class IV - - - 0.0000000000000000000000000000000004981 141.0
YYD2_k127_1873256_9 Redoxin - - - 0.00000000000000000000000008203 115.0
YYD2_k127_1882446_0 Acyl-CoA dehydrogenase, C-terminal domain K16173 - 1.3.99.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 516.0
YYD2_k127_1882446_1 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 396.0
YYD2_k127_1882446_2 - - - - 0.000001612 51.0
YYD2_k127_1885769_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 411.0
YYD2_k127_1885769_1 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004017 281.0
YYD2_k127_1885769_2 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000005935 194.0
YYD2_k127_1895781_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003683 284.0
YYD2_k127_1895781_1 Belongs to the MraZ family K03925 - - 0.0000000000000000000000000000000000000000000002271 171.0
YYD2_k127_1895781_2 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.0000000000000000000000003362 112.0
YYD2_k127_1903192_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000416 429.0
YYD2_k127_1903192_1 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004903 344.0
YYD2_k127_1903192_2 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000002983 231.0
YYD2_k127_1925106_0 T4-like virus tail tube protein gp19 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 306.0
YYD2_k127_1925106_2 - - - - 0.0000000000000000000000000000000000009993 149.0
YYD2_k127_1925106_3 ATPase family associated with various cellular activities (AAA) - - - 0.000000207 60.0
YYD2_k127_1929883_0 electron transfer activity K00428 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005044 297.0
YYD2_k127_1929883_1 Iron/manganese superoxide dismutases, C-terminal domain K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000001287 243.0
YYD2_k127_1929883_2 deaminated base DNA N-glycosylase activity K21929 - 3.2.2.27 0.00000000000000000000000000000000000005902 150.0
YYD2_k127_1940129_0 40-residue YVTN family beta-propeller repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 477.0
YYD2_k127_1940129_1 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 355.0
YYD2_k127_1946512_0 PFAM type II secretion system protein E K02283,K03609 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005429 573.0
YYD2_k127_1946512_1 Type II secretion system K12510 - - 0.0000000000000000000000000000000000000000000000000000000000004517 222.0
YYD2_k127_1946512_2 Type II secretion system (T2SS), protein F K12511 - - 0.000000000000000000000000000000000000000000000000004921 192.0
YYD2_k127_1946512_3 Pilus assembly protein K02282 - - 0.000000000000000000000000000000000000004058 162.0
YYD2_k127_1946512_4 TadE-like protein - - - 0.00000000000000002174 88.0
YYD2_k127_1946512_5 Putative Flp pilus-assembly TadE/G-like - - - 0.00000000000005659 85.0
YYD2_k127_1946512_6 TadE-like protein - - - 0.00000000001311 72.0
YYD2_k127_1947479_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 575.0
YYD2_k127_1947479_1 argininosuccinate lyase K01755,K14681 - 2.3.1.1,4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 480.0
YYD2_k127_1947479_10 Thiol disulfide interchange protein - - - 0.00000000000000000000001529 114.0
YYD2_k127_1947479_11 COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases - - - 0.00000000000000000000131 105.0
YYD2_k127_1947479_12 Regulates arginine biosynthesis genes K03402 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000004371 95.0
YYD2_k127_1947479_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 363.0
YYD2_k127_1947479_3 Belongs to the ATCase OTCase family K00611,K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3,2.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006557 330.0
YYD2_k127_1947479_4 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 292.0
YYD2_k127_1947479_5 Mo-molybdopterin cofactor biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001068 279.0
YYD2_k127_1947479_6 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000003531 257.0
YYD2_k127_1947479_7 Acetyltransferase (GNAT) domain K03817 - - 0.0000000000000000000000000000000000000000000000000005504 188.0
YYD2_k127_1947479_8 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K06878 - - 0.00000000000000000000000000000000000000000001015 165.0
YYD2_k127_1947479_9 - - - - 0.00000000000000000000000000006794 123.0
YYD2_k127_1957310_0 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006831 402.0
YYD2_k127_1957310_1 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 359.0
YYD2_k127_1957310_2 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 306.0
YYD2_k127_1957310_3 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007153 279.0
YYD2_k127_1957310_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008353 251.0
YYD2_k127_1957310_5 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000000003104 116.0
YYD2_k127_1957310_6 SurA N-terminal domain K03769,K07533 - 5.2.1.8 0.00000000000000000000000001704 118.0
YYD2_k127_1957310_7 - - - - 0.000000000002132 74.0
YYD2_k127_1957310_8 snoRNA binding - - - 0.0000000003384 66.0
YYD2_k127_1969477_0 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004541 495.0
YYD2_k127_1969477_1 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003203 325.0
YYD2_k127_1969477_2 ATP-dependent helicase nuclease subunit A K16898 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000371 231.0
YYD2_k127_1969477_3 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddB nuclease domain is not required for chi fragment generation K16899 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000003453 239.0
YYD2_k127_1969477_4 membrane - - - 0.00000000000000000000000000000002254 128.0
YYD2_k127_1969477_5 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.0000000000000000005551 98.0
YYD2_k127_1977535_0 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000624 304.0
YYD2_k127_1977535_1 molybdenum ion binding K07140 - - 0.00000000000000000000000000000000001256 138.0
YYD2_k127_1977535_2 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000002541 97.0
YYD2_k127_1987759_0 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02841,K02843,K02849 - - 0.0000000000000000000000000000001436 137.0
YYD2_k127_1987759_1 Trm112p-like protein K09791 - - 0.00000000000000000000001246 101.0
YYD2_k127_1987759_2 PD-(D/E)XK nuclease superfamily - - - 0.000000000000001142 80.0
YYD2_k127_1987759_3 peptidyl-tyrosine sulfation - - - 0.0000000005909 65.0
YYD2_k127_1987759_4 Domain of unknown function (DUF4388) - - - 0.0000007489 60.0
YYD2_k127_2000276_0 Major facilitator Superfamily - - - 5.25e-199 632.0
YYD2_k127_2000276_1 Prolyl oligopeptidase family K00433 - 1.11.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 490.0
YYD2_k127_2000276_10 Inhibitor of apoptosis-promoting Bax1 K06890 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000008588 53.0
YYD2_k127_2000276_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007989 421.0
YYD2_k127_2000276_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 390.0
YYD2_k127_2000276_4 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 370.0
YYD2_k127_2000276_5 Asp/Glu/Hydantoin racemase K01779 - 5.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000001524 240.0
YYD2_k127_2000276_6 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000001047 130.0
YYD2_k127_2000276_7 Isoprenylcysteine carboxyl methyltransferase (ICMT) family K21310 - 2.1.1.334 0.0000000000000000000000000000917 118.0
YYD2_k127_2000276_8 Tetratricopeptide repeat - - - 0.00000000005943 69.0
YYD2_k127_2000276_9 COG0076 Glutamate decarboxylase and related PLP-dependent proteins - - - 0.0000000007375 66.0
YYD2_k127_2021508_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000001961 238.0
YYD2_k127_2021508_1 Maf-like protein K06287 - - 0.000000000000000000000000008727 114.0
YYD2_k127_2021508_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000001809 79.0
YYD2_k127_2021508_3 Belongs to the UPF0232 family - - - 0.00000121 56.0
YYD2_k127_2027684_0 Methionine synthase K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0030312,GO:0032259,GO:0042084,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005678 430.0
YYD2_k127_2027684_1 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000001453 91.0
YYD2_k127_2030015_0 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000723 554.0
YYD2_k127_2030015_1 Serine aminopeptidase, S33 K07019 - - 0.0000000000000000000000000000000000000000000000000000002917 201.0
YYD2_k127_2030015_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000001396 56.0
YYD2_k127_2034404_0 cobalamin-transporting ATPase activity - - - 0.0 1138.0
YYD2_k127_2034404_1 Branched-chain amino acid transport system / permease component K10440,K10553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 439.0
YYD2_k127_2034404_2 ROK family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007753 430.0
YYD2_k127_2034404_3 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001485 269.0
YYD2_k127_2034404_4 Cupin 2, conserved barrel domain protein - - - 0.000000000000005108 87.0
YYD2_k127_2041977_0 A-macroglobulin receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 372.0
YYD2_k127_2041977_1 Protein of unknown function DUF72 - - - 0.000000000000000001469 85.0
YYD2_k127_2048564_0 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005589 320.0
YYD2_k127_2048564_1 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000003807 228.0
YYD2_k127_2048564_2 AcrB/AcrD/AcrF family - - - 0.000000000000000000000000000000000000000000000000000000002735 203.0
YYD2_k127_2048564_3 - - - - 0.00000000000000000000000000000000028 132.0
YYD2_k127_2048564_4 Protein of unknown function (DUF2892) - - - 0.000000000000000000001417 95.0
YYD2_k127_205498_0 Belongs to the KdsA family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 333.0
YYD2_k127_205498_1 PPIC-type PPIASE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004036 315.0
YYD2_k127_205498_2 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002652 284.0
YYD2_k127_205498_3 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.000000000000000000000000000000000000000000000000000000000000000000003304 239.0
YYD2_k127_205498_4 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000000000003686 220.0
YYD2_k127_205498_5 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000003763 169.0
YYD2_k127_2076167_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 407.0
YYD2_k127_2076167_1 PFAM transferase hexapeptide repeat containing protein K00966 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 302.0
YYD2_k127_2085029_0 Belongs to the glycosyl hydrolase 2 family K01192 - 3.2.1.25 1.675e-249 796.0
YYD2_k127_2085124_0 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 422.0
YYD2_k127_2085124_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 342.0
YYD2_k127_2085124_2 Yip1 domain - - - 0.000005228 58.0
YYD2_k127_2087599_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 439.0
YYD2_k127_2087599_1 Psort location CytoplasmicMembrane, score 9.46 - - - 0.0000000000000000000000000000000000000001582 160.0
YYD2_k127_2103306_0 Carboxypeptidase regulatory-like domain - - - 2.757e-206 679.0
YYD2_k127_2103306_1 PFAM MaoC domain protein dehydratase K14449 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009436,GO:0009987,GO:0015977,GO:0016054,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0032787,GO:0043427,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046185,GO:0046395,GO:0046487,GO:0071704,GO:0072329,GO:1901575 4.2.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000001936 243.0
YYD2_k127_2103306_2 - - - - 0.000000000000000000000000000000000000003815 150.0
YYD2_k127_2103306_3 Participates in transcription elongation, termination and antitermination - - - 0.000000002296 62.0
YYD2_k127_2103306_4 Peptidase M16 inactive domain - - - 0.00004549 54.0
YYD2_k127_2105224_0 beta-ketoacyl-acyl-carrier-protein synthase III activity K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000209 239.0
YYD2_k127_2105224_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000001027 229.0
YYD2_k127_2105224_2 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000387 84.0
YYD2_k127_2107899_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 2.9e-240 769.0
YYD2_k127_2121964_0 PFAM gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000667 554.0
YYD2_k127_2121964_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008219 506.0
YYD2_k127_2121964_2 Putative neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000918 339.0
YYD2_k127_2121964_3 Phosphoenolpyruvate phosphomutase K03417 - 4.1.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000007381 262.0
YYD2_k127_2121964_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000001123 202.0
YYD2_k127_2121964_5 Tyrosine phosphatase family - - - 0.000000000000000000000000000000001422 137.0
YYD2_k127_2121964_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000006706 103.0
YYD2_k127_2121964_7 - - - - 0.00000000000000032 83.0
YYD2_k127_2121964_8 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000009455 53.0
YYD2_k127_2157188_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 8.274e-207 652.0
YYD2_k127_2157188_1 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000002302 216.0
YYD2_k127_2157188_2 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000001325 168.0
YYD2_k127_2157188_3 Vitamin K-dependent gamma-carboxylase - - - 0.000000000000000007 93.0
YYD2_k127_2172834_0 Putative carbohydrate binding domain K12373 - 3.2.1.52 9.201e-237 752.0
YYD2_k127_2172834_1 ASPIC and UnbV - - - 1.902e-210 667.0
YYD2_k127_2172834_10 Cytochrome c554 and c-prime - - - 0.000000000000004312 79.0
YYD2_k127_2172834_11 COGs COG4299 conserved - - - 0.0000001691 52.0
YYD2_k127_2172834_2 ASPIC and UnbV - - - 1.58e-201 642.0
YYD2_k127_2172834_3 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006982 599.0
YYD2_k127_2172834_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 410.0
YYD2_k127_2172834_5 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 377.0
YYD2_k127_2172834_6 ROK family - - - 0.00000000000000000000000000000000000000000000000000000002869 212.0
YYD2_k127_2172834_7 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000003017 124.0
YYD2_k127_2172834_8 oxidoreductase activity - - - 0.0000000000000000000005084 108.0
YYD2_k127_2172834_9 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000003798 98.0
YYD2_k127_217819_0 Carboxypeptidase regulatory-like domain - - - 5.711e-227 736.0
YYD2_k127_217819_1 Transcriptional regulatory protein, C terminal K07662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 306.0
YYD2_k127_217819_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07640 - 2.7.13.3 0.000000000000000000000000000000006287 137.0
YYD2_k127_218938_0 Beta propeller domain - - - 1.134e-221 704.0
YYD2_k127_218938_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000001047 191.0
YYD2_k127_218938_2 Transposase - - - 0.0000000000000000000000000000001086 130.0
YYD2_k127_2193447_0 von Willebrand factor (vWF) type A domain K02448 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001282 290.0
YYD2_k127_2196019_0 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1359.0
YYD2_k127_2196019_1 Beta-Casp domain K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000008417 228.0
YYD2_k127_2196019_2 - - - - 0.0000000000000000000000000000001501 142.0
YYD2_k127_2220252_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009752 449.0
YYD2_k127_2220252_1 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000008916 208.0
YYD2_k127_2220252_2 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.000000000000000000000000000003483 123.0
YYD2_k127_2229880_0 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 593.0
YYD2_k127_2230525_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 389.0
YYD2_k127_2230525_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 GO:0003674,GO:0003824,GO:0008110,GO:0008483,GO:0016740,GO:0016769 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000007548 226.0
YYD2_k127_2232687_0 MacB-like periplasmic core domain - - - 6.536e-215 695.0
YYD2_k127_2232687_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 587.0
YYD2_k127_2232687_2 MacB-like periplasmic core domain - - - 0.0000000000000000004866 91.0
YYD2_k127_2237752_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009078 555.0
YYD2_k127_2237752_1 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 390.0
YYD2_k127_2237752_2 - - - - 0.00000000000000000000000000000000000000000000000000000000139 203.0
YYD2_k127_2237752_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000006365 198.0
YYD2_k127_2237752_4 OsmC-like protein K06889,K07397 - - 0.0000000000000000000000000000000000001854 145.0
YYD2_k127_2247582_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 409.0
YYD2_k127_2247582_1 CorA-like Mg2+ transporter protein K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008661 294.0
YYD2_k127_2247582_2 Phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.000000000000000000000000006907 119.0
YYD2_k127_2247582_3 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000003094 68.0
YYD2_k127_2247947_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005733 290.0
YYD2_k127_2247947_1 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002541 261.0
YYD2_k127_2247947_2 methyltransferase - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000001702 228.0
YYD2_k127_2247947_3 Glycosyl transferase, family 2 K07011 - - 0.00000000000000000000000000000000000000002725 165.0
YYD2_k127_2247947_4 Protein of unknown function (DUF563) - - - 0.00000000000000000000000000000000000001504 158.0
YYD2_k127_2255167_0 isomerase K01820 - 5.3.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 591.0
YYD2_k127_2255167_1 Class II Aldolase and Adducin N-terminal domain - - - 0.0000000000000000000000000000003524 123.0
YYD2_k127_2258487_0 PD-(D/E)XK nuclease superfamily K16898 - 3.6.4.12 0.0000000000000000000000000000000000000003537 171.0
YYD2_k127_2263866_0 gluconolactonase activity K14274,K20274 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 400.0
YYD2_k127_2263866_1 actin binding - - - 0.000000000000000000000000000000000000000000000000000007842 207.0
YYD2_k127_2263866_2 DinB superfamily - - - 0.000000000000000171 83.0
YYD2_k127_2263866_3 DinB superfamily - - - 0.00000000000006977 73.0
YYD2_k127_227740_0 Metallopeptidase family M24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 462.0
YYD2_k127_2288101_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007111 362.0
YYD2_k127_2288101_1 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 299.0
YYD2_k127_2288101_2 Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily K09457 - 1.7.1.13 0.000000000000094 74.0
YYD2_k127_2293551_0 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008011 378.0
YYD2_k127_2293551_1 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006054 296.0
YYD2_k127_2293551_2 eight transmembrane protein EpsH - - - 0.000000000000000000000000000000000000000000000000000000000000000000002889 248.0
YYD2_k127_2293551_3 AAA domain K02450 - - 0.00000000000000000000000000000000000000000000000000000000000000166 229.0
YYD2_k127_2293551_4 Lipopolysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000002165 178.0
YYD2_k127_2293551_5 Capsular exopolysaccharide family K08252 - 2.7.10.1 0.0000000000000000000000000000000000000009175 162.0
YYD2_k127_2293551_6 ATP hydrolysis coupled proton transport K02123 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000003645 145.0
YYD2_k127_2293551_7 cellulose binding - - - 0.000000000001187 80.0
YYD2_k127_2293551_8 Glycosyl hydrolases family 16 - - - 0.0000000001415 74.0
YYD2_k127_2325858_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007041 491.0
YYD2_k127_2325858_1 Domain of unknown function (DUF1972) K12996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006783 402.0
YYD2_k127_2325858_10 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000003041 93.0
YYD2_k127_2325858_11 KH domain - - - 0.00000000000000006875 82.0
YYD2_k127_2325858_12 Gram-negative bacterial TonB protein C-terminal - - - 0.000000001085 70.0
YYD2_k127_2325858_13 domain protein - - - 0.000000002566 68.0
YYD2_k127_2325858_2 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000705 346.0
YYD2_k127_2325858_3 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000042 282.0
YYD2_k127_2325858_4 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003033 278.0
YYD2_k127_2325858_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.000000000000000000000000000000000000000000000000001406 191.0
YYD2_k127_2325858_6 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000000003846 153.0
YYD2_k127_2325858_7 - - - - 0.000000000000000000000000000000000006212 151.0
YYD2_k127_2325858_8 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000005049 122.0
YYD2_k127_2325858_9 Histidine kinase - - - 0.0000000000000000000008324 100.0
YYD2_k127_232605_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 459.0
YYD2_k127_2330067_0 ADP-glyceromanno-heptose 6-epimerase activity K01710,K01784,K08678,K08679 - 4.1.1.35,4.2.1.46,5.1.3.2,5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 504.0
YYD2_k127_2330067_1 ABC-2 type transporter K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 413.0
YYD2_k127_2330067_2 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 357.0
YYD2_k127_2330067_3 Wzt C-terminal domain K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 338.0
YYD2_k127_2330067_4 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005653 306.0
YYD2_k127_2330067_5 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000002778 205.0
YYD2_k127_2330067_6 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000000000000000000001158 163.0
YYD2_k127_2330067_7 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000002891 111.0
YYD2_k127_2330067_8 helix_turn_helix, Lux Regulon K03556 - - 0.00000008228 61.0
YYD2_k127_2345081_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 1.968e-320 994.0
YYD2_k127_2345081_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 2.745e-221 698.0
YYD2_k127_2345081_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000565 494.0
YYD2_k127_2345081_3 C-terminal, D2-small domain, of ClpB protein K03696 GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003433 490.0
YYD2_k127_2345081_4 with different specificities (related to short-chain alcohol K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003138 284.0
YYD2_k127_2345081_5 Hsp20/alpha crystallin family K13993 - - 0.00000000000000000000006992 103.0
YYD2_k127_2345081_6 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.0000000000000000002798 97.0
YYD2_k127_2345081_7 - - - - 0.000000007367 66.0
YYD2_k127_2363496_0 dTDP biosynthetic process K00560,K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.1.1.45,2.7.4.9,4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 306.0
YYD2_k127_2363496_1 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003106 297.0
YYD2_k127_2363496_2 dTDP biosynthetic process K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.9,4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000001003 256.0
YYD2_k127_2363496_3 - - - - 0.0000000000000000000000000000000000000000000000000000000008101 205.0
YYD2_k127_2363496_4 CHAD - - - 0.0000000000000000001446 100.0
YYD2_k127_2367229_0 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 550.0
YYD2_k127_2367229_1 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005192 252.0
YYD2_k127_2378891_0 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005922 276.0
YYD2_k127_2378891_1 Aerotolerance regulator N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009967 261.0
YYD2_k127_2379319_0 Membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 359.0
YYD2_k127_2379319_1 Domain of unknown function (DUF4162) K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 315.0
YYD2_k127_2379319_2 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002092 243.0
YYD2_k127_2379319_3 Uracil DNA glycosylase superfamily K03649 - 3.2.2.28 0.000000000000000000000000000000000000000000000000000000000000000000003753 239.0
YYD2_k127_2379319_4 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000001228 239.0
YYD2_k127_2379319_5 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000000000000000003221 221.0
YYD2_k127_2383568_0 DegT/DnrJ/EryC1/StrS aminotransferase family K02805,K07806 - 2.6.1.59,2.6.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008923 490.0
YYD2_k127_2383568_1 methyltransferase - - - 0.000000001739 63.0
YYD2_k127_2392810_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 568.0
YYD2_k127_2392810_1 Tetratricopeptide repeat - - - 0.0000000000000001907 83.0
YYD2_k127_24043_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 405.0
YYD2_k127_24043_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000004505 190.0
YYD2_k127_24043_2 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000006893 182.0
YYD2_k127_24043_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000001335 161.0
YYD2_k127_24043_4 binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000001327 153.0
YYD2_k127_24043_5 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000427 113.0
YYD2_k127_24043_6 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000002312 93.0
YYD2_k127_2434183_0 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003386 431.0
YYD2_k127_2434183_1 Amidohydrolase K03392 - 4.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000001344 267.0
YYD2_k127_2434183_2 - - - - 0.0000000000000002256 81.0
YYD2_k127_2434585_0 cAMP biosynthetic process K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 488.0
YYD2_k127_2434585_1 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001643 291.0
YYD2_k127_2434585_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000007975 156.0
YYD2_k127_2441870_0 Peptidase M14, carboxypeptidase A - - - 0.0 1305.0
YYD2_k127_2441870_1 copper resistance - - - 0.000002353 55.0
YYD2_k127_2448099_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 1.77e-296 929.0
YYD2_k127_2448099_1 CO dehydrogenase flavoprotein domain protein K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005432 281.0
YYD2_k127_2448099_2 Carbon monoxide dehydrogenase subunit G (CoxG) K09386 - - 0.0006343 43.0
YYD2_k127_2449955_0 PFAM CobN Magnesium Chelatase K02230,K03403 - 6.6.1.1,6.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008045 542.0
YYD2_k127_2449955_1 PFAM CobN Magnesium Chelatase K02230,K03403 - 6.6.1.1,6.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 493.0
YYD2_k127_2449955_2 von Willebrand factor (vWF) type A domain K03404,K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003744 412.0
YYD2_k127_2456016_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002985 455.0
YYD2_k127_2458832_0 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000004182 221.0
YYD2_k127_2458832_1 Histidine kinase K02668,K07708 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000002626 227.0
YYD2_k127_2458832_2 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000001859 198.0
YYD2_k127_2458832_3 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.0000000000000000000000000000000000000000000000000001804 190.0
YYD2_k127_2458832_4 Outer membrane efflux protein - - - 0.00000000000000000000000000006363 131.0
YYD2_k127_2460578_0 Ftsk_gamma K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 626.0
YYD2_k127_2460578_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000474 400.0
YYD2_k127_2460578_2 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000187 257.0
YYD2_k127_2463499_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 5.242e-267 831.0
YYD2_k127_2463499_1 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 368.0
YYD2_k127_2463499_2 Two component transcriptional regulator, winged helix family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001249 240.0
YYD2_k127_2463499_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000000003106 154.0
YYD2_k127_2463499_4 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00000000000000000000000008397 112.0
YYD2_k127_2463499_5 Bacterial regulatory protein, Fis family - - - 0.0000001998 55.0
YYD2_k127_2466403_0 Dienelactone hydrolase family - - - 2.094e-285 892.0
YYD2_k127_2466403_1 COG0346 Lactoylglutathione lyase and related lyases - - - 0.000000000000000000000000000000000000000000000001467 176.0
YYD2_k127_2484590_0 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003103 515.0
YYD2_k127_2484590_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 406.0
YYD2_k127_2484590_2 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 391.0
YYD2_k127_2484590_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000002386 203.0
YYD2_k127_2484590_4 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000001418 183.0
YYD2_k127_2484590_5 Transporter associated domain - - - 0.00000000000000000000000000000000000000000000008271 174.0
YYD2_k127_2484590_6 Cell wall-associated hydrolase (invasion-associated protein) - - - 0.000000000000005166 83.0
YYD2_k127_2484590_7 Cysteine-rich CWC - - - 0.0000004386 55.0
YYD2_k127_2484590_8 - - - - 0.00007002 48.0
YYD2_k127_2485191_0 PFAM glycoside hydrolase family 3 domain protein K05349 - 3.2.1.21 1.185e-240 758.0
YYD2_k127_2485191_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K04105,K04110 - 6.2.1.25,6.2.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 380.0
YYD2_k127_2485191_2 Tetratricopeptide repeat - - - 0.00006017 53.0
YYD2_k127_2512830_0 HELICc2 K03722 - 3.6.4.12 9.713e-196 630.0
YYD2_k127_2512830_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002253 275.0
YYD2_k127_2512830_2 PFAM 6-pyruvoyl tetrahydropterin K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000005312 134.0
YYD2_k127_2512830_3 PFAM Acyltransferase - - - 0.00000000000001212 84.0
YYD2_k127_2524419_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 462.0
YYD2_k127_2524419_1 endo-1,4-beta-xylanase activity K21606 - 3.2.1.202 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 340.0
YYD2_k127_2524419_2 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005362 312.0
YYD2_k127_2527271_0 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007391 433.0
YYD2_k127_2527271_1 Dehydrogenase E1 component K00167,K11381,K21417 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000003661 244.0
YYD2_k127_2527271_2 chlorophyll binding - - - 0.0000000000000000000000000000000000000005386 161.0
YYD2_k127_2527271_3 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000000000000000403 150.0
YYD2_k127_2527271_4 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000005858 113.0
YYD2_k127_2527271_5 PFAM von Willebrand factor type A - - - 0.00000000000000000000001485 113.0
YYD2_k127_2533763_0 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 450.0
YYD2_k127_2533763_1 ATPases associated with a variety of cellular activities K10823,K10824 - 3.6.3.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 443.0
YYD2_k127_2533763_10 Sensory domain found in PocR - - - 0.000001692 58.0
YYD2_k127_2533763_2 Belongs to the ABC transporter superfamily K15583 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 419.0
YYD2_k127_2533763_3 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007122 380.0
YYD2_k127_2533763_4 'ABC-type dipeptide oligopeptide nickel transport K02034,K15582 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 342.0
YYD2_k127_2533763_5 transporter, permease K02033,K15581 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 321.0
YYD2_k127_2533763_6 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003609 274.0
YYD2_k127_2533763_7 Methyltransferase domain K00588 - 2.1.1.104 0.000000000000000000000000000000000000000000000000000000000001567 216.0
YYD2_k127_2533763_9 Type VI secretion system protein DotU K11892 - - 0.0000004698 52.0
YYD2_k127_2552690_0 Protein tyrosine kinase - - - 4.044e-218 706.0
YYD2_k127_2552690_1 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007854 545.0
YYD2_k127_2552690_2 COG2366 Protein related to penicillin acylase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 388.0
YYD2_k127_2557573_0 Sugar (and other) transporter - - - 1.411e-211 666.0
YYD2_k127_2557573_1 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008436 505.0
YYD2_k127_2557573_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 433.0
YYD2_k127_2557573_3 Transmembrane secretion effector K08225 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 394.0
YYD2_k127_2557573_4 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 347.0
YYD2_k127_2557573_5 hydrolase activity, hydrolyzing N-glycosyl compounds - - - 0.000000000000000000000000000000000000000000000000000000000000003456 226.0
YYD2_k127_2557573_6 Lipoprotein - - - 0.000000000000000005508 91.0
YYD2_k127_2557573_7 tpr domain protein - - - 0.0009117 51.0
YYD2_k127_2560261_0 AcrB/AcrD/AcrF family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000002994 232.0
YYD2_k127_2560261_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K03585 - - 0.0000000000000000000000000000000000000000000000000000000000003187 227.0
YYD2_k127_2560261_2 Bacterial regulatory proteins, tetR family - - - 0.0000004411 55.0
YYD2_k127_2561572_0 Pectinesterase K01051 - 3.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 291.0
YYD2_k127_2561572_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000001857 225.0
YYD2_k127_2573376_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1270.0
YYD2_k127_2574081_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00282 GO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006807,GO:0008150,GO:0008152,GO:0009069,GO:0009987,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019752,GO:0032991,GO:0042133,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901605,GO:1902494,GO:1990204 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 479.0
YYD2_k127_2574081_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 414.0
YYD2_k127_2574081_2 Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate K02437 - - 0.0000000000000000000000000000000000000000000001337 171.0
YYD2_k127_2574081_3 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.00000000000000000000000000000000000006208 156.0
YYD2_k127_2574081_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000001346 148.0
YYD2_k127_2574081_5 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000007366 66.0
YYD2_k127_2574081_6 Domain of unknown function (DUF4349) - - - 0.000005245 57.0
YYD2_k127_2610235_0 Sigma-70, region 4 K03088 - - 0.00000000000009655 78.0
YYD2_k127_2615176_0 GlcNAc-PI de-N-acetylase K01463 - - 0.000000000000000000000000000000000000000000000000009215 189.0
YYD2_k127_2615176_1 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000001103 168.0
YYD2_k127_2615176_2 beta-lactamase domain protein - - - 0.00000000000000000000000000000003061 136.0
YYD2_k127_2615176_3 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000001821 81.0
YYD2_k127_2615706_0 Ferritin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005852 278.0
YYD2_k127_2615706_1 Rhomboid family K19225 - 3.4.21.105 0.00000000000000000000000000000000003014 148.0
YYD2_k127_2617836_0 gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007419 567.0
YYD2_k127_2617836_1 PFAM FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000622 414.0
YYD2_k127_2622210_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002452 249.0
YYD2_k127_2622210_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000002191 191.0
YYD2_k127_2622210_2 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000001004 187.0
YYD2_k127_263253_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000002578 210.0
YYD2_k127_263253_1 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000000000000000007717 146.0
YYD2_k127_263253_2 PFAM WD40 domain protein beta Propeller - - - 0.000000000000000001682 86.0
YYD2_k127_2635145_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 1.658e-238 751.0
YYD2_k127_2635145_1 Integral membrane protein TerC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007145 331.0
YYD2_k127_2635145_2 copper resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005782 335.0
YYD2_k127_2635145_3 Chromate transporter K07240 - - 0.00000000000000000001282 93.0
YYD2_k127_2642877_0 Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system K10441,K10545 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000383 554.0
YYD2_k127_2642877_1 Periplasmic binding protein domain K10543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000424 381.0
YYD2_k127_2642877_2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840,K03431,K15778 - 5.4.2.10,5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004711 372.0
YYD2_k127_2647696_0 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000397 390.0
YYD2_k127_2647696_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049 353.0
YYD2_k127_2647696_2 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 296.0
YYD2_k127_2647696_3 AIR carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008841 279.0
YYD2_k127_2647696_4 - - - - 0.00000000000000000000000000000000000000000000001631 184.0
YYD2_k127_2647696_5 Lecithin:cholesterol acyltransferase - - - 0.00000000000000000000000000000000000000000000005779 186.0
YYD2_k127_2647696_6 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000009983 145.0
YYD2_k127_2665952_0 Belongs to the aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 4.517e-196 623.0
YYD2_k127_2665952_1 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 321.0
YYD2_k127_2665952_2 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 302.0
YYD2_k127_2665952_3 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000003777 231.0
YYD2_k127_2665952_4 Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase K07559 - - 0.0000000000000221 74.0
YYD2_k127_2665952_5 - - - - 0.0004528 48.0
YYD2_k127_2676816_0 Carboxyl transferase domain - - - 4.09e-235 737.0
YYD2_k127_2676816_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 3.288e-224 713.0
YYD2_k127_2676816_10 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000001584 158.0
YYD2_k127_2676816_11 PFAM thioesterase superfamily K07107 - - 0.00000000000000000000000000000000001096 141.0
YYD2_k127_2676816_12 Ribosomal protein L35 K02916 - - 0.0000000000000000002331 89.0
YYD2_k127_2676816_13 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000134 55.0
YYD2_k127_2676816_14 Redoxin - - - 0.000006607 56.0
YYD2_k127_2676816_2 Acyclic terpene utilisation family protein AtuA - - - 8.651e-211 663.0
YYD2_k127_2676816_3 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 473.0
YYD2_k127_2676816_4 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003091 364.0
YYD2_k127_2676816_5 YmdB-like protein K09769 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004695 286.0
YYD2_k127_2676816_6 Zn peptidase - - - 0.000000000000000000000000000000000000000000000000000000000005326 228.0
YYD2_k127_2676816_7 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000007065 205.0
YYD2_k127_2676816_8 Alternative locus ID - - - 0.000000000000000000000000000000000000000000000289 182.0
YYD2_k127_2676816_9 - - - - 0.0000000000000000000000000000000000000000004025 162.0
YYD2_k127_2678633_0 cellulose binding - - - 0.0 1066.0
YYD2_k127_2678633_1 - - - - 0.000000000000000000000000000000000000000000168 168.0
YYD2_k127_2678633_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000003935 111.0
YYD2_k127_2685913_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000729 475.0
YYD2_k127_2688244_0 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 399.0
YYD2_k127_2688244_1 Gram-negative bacterial TonB protein C-terminal - - - 0.000000009127 66.0
YYD2_k127_2695626_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 GO:0000287,GO:0001666,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0008976,GO:0009267,GO:0009405,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0015968,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019538,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036211,GO:0036293,GO:0040007,GO:0042594,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044464,GO:0046777,GO:0046872,GO:0050896,GO:0051704,GO:0051716,GO:0070482,GO:0071496,GO:0071704,GO:0071944,GO:1901564 2.7.4.1 4.674e-201 649.0
YYD2_k127_2695626_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000471 239.0
YYD2_k127_2695626_2 Calcineurin-like phosphoesterase superfamily domain K07313 - 3.1.3.16 0.000000000000000000000000000000002742 137.0
YYD2_k127_2695626_4 Protein of unknown function (DUF3311) - - - 0.00000000001424 68.0
YYD2_k127_2695626_5 Domain of unknown function (DUF4956) - - - 0.00000000002331 74.0
YYD2_k127_2695626_6 phosphohistidine phosphatase K08296 - - 0.0000007917 52.0
YYD2_k127_2699006_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 563.0
YYD2_k127_2699006_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008937 306.0
YYD2_k127_2699006_2 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000002083 268.0
YYD2_k127_2699006_3 - - - - 0.0000000000001377 78.0
YYD2_k127_2701785_0 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 548.0
YYD2_k127_2701785_1 Radical SAM superfamily K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 484.0
YYD2_k127_2701785_10 Domain of unknown function (DUF305) K08995 - - 0.000000000000000000000000000000002378 136.0
YYD2_k127_2701785_11 Uncharacterized protein family UPF0016 - - - 0.0000000000000000000000001692 109.0
YYD2_k127_2701785_12 Anti-sigma-K factor rskA - - - 0.00000000000000007492 91.0
YYD2_k127_2701785_13 SnoaL-like domain - - - 0.00000001401 64.0
YYD2_k127_2701785_14 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.00001288 48.0
YYD2_k127_2701785_15 Domain of unknown function (DUF4440) - - - 0.00003285 55.0
YYD2_k127_2701785_2 PFAM Amidohydrolase 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007494 387.0
YYD2_k127_2701785_3 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 325.0
YYD2_k127_2701785_4 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003251 314.0
YYD2_k127_2701785_5 VIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 300.0
YYD2_k127_2701785_6 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000001056 206.0
YYD2_k127_2701785_7 protein, possibly involved in aromatic compounds catabolism - - - 0.00000000000000000000000000000000000000000001074 167.0
YYD2_k127_2701785_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000004482 161.0
YYD2_k127_2701785_9 Bacterial-like globin K06886 - - 0.000000000000000000000000000000000001426 144.0
YYD2_k127_2724808_0 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008844 425.0
YYD2_k127_2724808_1 Iron ABC transporter substrate-binding protein K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 342.0
YYD2_k127_2724808_2 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 355.0
YYD2_k127_2724808_3 TOBE domain K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 306.0
YYD2_k127_2724808_4 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.000000000000000000000000000000008568 137.0
YYD2_k127_2730205_0 ATPase P-type (Transporting), HAD superfamily, subfamily IC K01535,K01537 - 3.6.3.6,3.6.3.8 5.061e-301 943.0
YYD2_k127_2730205_1 - - - - 0.00002705 49.0
YYD2_k127_2754799_0 MacB-like periplasmic core domain - - - 5.995e-202 658.0
YYD2_k127_2754799_1 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 313.0
YYD2_k127_2754799_2 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000001738 197.0
YYD2_k127_2754799_3 MacB-like periplasmic core domain - - - 0.0000000000000000004419 91.0
YYD2_k127_2758983_0 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004271 275.0
YYD2_k127_2758983_1 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001966 287.0
YYD2_k127_2758983_2 Cysteine dioxygenase type I K00456 - 1.13.11.20 0.0000000000000000001942 96.0
YYD2_k127_2769292_0 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000159 152.0
YYD2_k127_2769292_1 peptidase inhibitor activity - - - 0.000000000000000000000000243 115.0
YYD2_k127_2769292_3 - - - - 0.00001869 55.0
YYD2_k127_2769618_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007524 419.0
YYD2_k127_2769618_1 Chloramphenicol acetyltransferase K19271 - 2.3.1.28 0.00000000000000000000000000000000000000000000002181 177.0
YYD2_k127_2769618_2 - - - - 0.00000005386 62.0
YYD2_k127_2773070_0 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 360.0
YYD2_k127_2773070_1 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000004242 134.0
YYD2_k127_2775510_0 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000003686 220.0
YYD2_k127_2775510_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000002346 212.0
YYD2_k127_2775510_2 HAD-hyrolase-like K01091,K01838 - 3.1.3.18,5.4.2.6 0.0000000000000000000000000000000003327 140.0
YYD2_k127_2775510_3 Protein of unknown function (DUF1003) - - - 0.0000000000000000005508 89.0
YYD2_k127_277933_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 332.0
YYD2_k127_277933_1 PFAM sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005768 297.0
YYD2_k127_277933_2 PFAM Peptidase M20 - - - 0.00000000000000000000000000000000000000000000000000000000000002527 232.0
YYD2_k127_277933_3 Metallophosphoesterase K07098 - - 0.000000000000000000000000000000000000000000000000006947 192.0
YYD2_k127_277933_4 glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.0000000000000000000000000000000000000000000003652 166.0
YYD2_k127_277933_5 -O-antigen - - - 0.00000000003314 76.0
YYD2_k127_277933_6 Fructose transport system kinase - - - 0.0000000001753 64.0
YYD2_k127_2788994_0 Glutamate-1-semialdehyde aminotransferase K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 531.0
YYD2_k127_2788994_1 phosphorelay sensor kinase activity K07710,K10942 - 2.7.13.3 0.00000000000000000000000000000000000000275 158.0
YYD2_k127_281501_0 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000007706 157.0
YYD2_k127_2816107_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009452 329.0
YYD2_k127_2816107_1 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006431 270.0
YYD2_k127_2816107_2 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000001917 183.0
YYD2_k127_2816107_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.000000000000000000000000000000000000016 152.0
YYD2_k127_2816107_4 extracellular solute-binding protein, family 5 K02035 - - 0.00000000000000000000000000000000002843 141.0
YYD2_k127_2816107_5 Soluble lytic murein K08309 - - 0.00000000000000000000000002081 127.0
YYD2_k127_2816107_6 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000001103 62.0
YYD2_k127_2820924_0 Glycosyl hydrolases family 43 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 496.0
YYD2_k127_2820924_1 protein F13E9.13, mitochondrial-like K06971 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 289.0
YYD2_k127_2820924_2 Putative lumazine-binding - - - 0.0000000000000000000000000000000000000000000004949 169.0
YYD2_k127_2838131_0 Hydrophobe Amphiphile Efflux-1 (HAE1) Family K03296,K18138 - - 0.0 1080.0
YYD2_k127_2838131_1 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 546.0
YYD2_k127_2838131_2 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT K18139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009156 423.0
YYD2_k127_2838131_3 Integral membrane sensor signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001007 283.0
YYD2_k127_2838131_4 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000001122 187.0
YYD2_k127_2873381_0 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005851 321.0
YYD2_k127_2873381_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 326.0
YYD2_k127_2873381_2 cAMP biosynthetic process K01768,K02483 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 295.0
YYD2_k127_2873799_0 Glycosyl Hydrolase Family 88 K15532 - 3.2.1.172 1.005e-268 842.0
YYD2_k127_2873799_1 FCD K05799 - - 0.00000000000000000001041 95.0
YYD2_k127_2873799_2 Glycosyl hydrolases family 28 - - - 0.00000000889 58.0
YYD2_k127_2876298_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 361.0
YYD2_k127_2876298_1 ADP-ribosylation factor family K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 306.0
YYD2_k127_2876298_2 PFAM Roadblock LC7 family protein - - - 0.00000000000000000000000000000000000000000008571 164.0
YYD2_k127_2876298_3 lipopolysaccharide transmembrane transporter activity K07058 - - 0.00000000000000004271 91.0
YYD2_k127_2876298_4 Acetyltransferase (GNAT) domain K03789 - 2.3.1.128 0.0000000000001643 78.0
YYD2_k127_2880703_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 6.889e-194 627.0
YYD2_k127_2880703_1 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 461.0
YYD2_k127_2880703_2 Response regulator, receiver - - - 0.000000000000000001698 89.0
YYD2_k127_2894224_0 lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000001178 246.0
YYD2_k127_2894224_1 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.000000000000000000000000000000000000000000000000000000000000000001732 234.0
YYD2_k127_2894224_2 Domain of unknown function (DUF374) K09778 - - 0.0000000000000000000000000000000000000000001443 168.0
YYD2_k127_2894224_3 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000008143 156.0
YYD2_k127_2894224_4 Histidine kinase-like ATPase domain - - - 0.000000000000000000000000000000000000009497 156.0
YYD2_k127_290209_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 3.316e-213 670.0
YYD2_k127_290209_1 COG1960 Acyl-CoA dehydrogenases - - - 1.582e-195 615.0
YYD2_k127_290209_2 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 535.0
YYD2_k127_290209_3 6-phosphogluconolactonase K01057 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009051,GO:0009117,GO:0009987,GO:0016787,GO:0016788,GO:0017057,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0052689,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003174 276.0
YYD2_k127_290209_4 - - - - 0.00000000000000000000000000001582 129.0
YYD2_k127_290209_5 Phosphoglycerate mutase family - - - 0.00000000000000002154 92.0
YYD2_k127_290209_6 Bacterial-like globin K06886 - - 0.0000000005126 59.0
YYD2_k127_2904668_0 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002959 274.0
YYD2_k127_2904668_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.0000000000000000000000000005756 117.0
YYD2_k127_2904668_2 ankyrin 3, node of Ranvier (ankyrin G) - - - 0.000000000000000000000000007017 120.0
YYD2_k127_2910294_0 PFAM Glycoside hydrolase, family 2, TIM barrel K01190 - 3.2.1.23 1.876e-307 959.0
YYD2_k127_2910294_1 Sialate O-acetylesterase K05970 - 3.1.1.53 2.822e-194 619.0
YYD2_k127_2910294_2 Belongs to the glycosyl hydrolase 2 family K01190 - 3.2.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 616.0
YYD2_k127_2910294_3 endo-1,4-beta-xylanase activity K21606 - 3.2.1.202 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003792 345.0
YYD2_k127_2910593_0 Cytochrome c7 and related cytochrome c - - - 0.000000005047 67.0
YYD2_k127_2910593_1 heat shock protein binding - - - 0.00007837 54.0
YYD2_k127_2910593_2 cellulose binding - - - 0.00009677 52.0
YYD2_k127_2910593_3 Cytochrome c554 and c-prime - - - 0.0001112 51.0
YYD2_k127_29189_0 Urocanase Rossmann-like domain K01712 - 4.2.1.49 8.465e-269 835.0
YYD2_k127_29189_1 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000139 267.0
YYD2_k127_29189_2 esterase - - - 0.0000000000000000000000000000000000000000001995 171.0
YYD2_k127_29189_3 Transcription factor zinc-finger K09981 - - 0.000001225 51.0
YYD2_k127_292224_0 Tricorn protease C1 domain K08676 - - 2.637e-209 667.0
YYD2_k127_292224_1 peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 532.0
YYD2_k127_292224_2 acetyltransferase - - - 0.00000000000000000000000000000000000000000002883 166.0
YYD2_k127_2933682_0 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 490.0
YYD2_k127_2933682_1 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000002044 189.0
YYD2_k127_2933682_2 Glyoxalase-like domain K08234 - - 0.00000000000000000000000000000000000000002596 153.0
YYD2_k127_2944401_0 L-seryl-tRNA selenium transferase K01042 - 2.9.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 349.0
YYD2_k127_2944401_1 CHASE2 - - - 0.0000000000000000000000000000000000000000000000000002247 208.0
YYD2_k127_2944401_2 SET domain K07117 - - 0.0000000000000000000000000000001841 127.0
YYD2_k127_2944401_3 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000005626 54.0
YYD2_k127_2946377_0 Domain of unknown function (DUF5117) - - - 4.633e-289 909.0
YYD2_k127_2946377_1 - - - - 0.000000000000000000001133 110.0
YYD2_k127_296466_0 PFAM Zinc carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 446.0
YYD2_k127_296466_1 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.0000000002188 67.0
YYD2_k127_2972617_0 NADH flavin oxidoreductase NADH oxidase K09461 - 1.14.13.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 374.0
YYD2_k127_2972617_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 348.0
YYD2_k127_2972617_2 NADH oxidase - - - 0.0000000000000000000000000000000003233 132.0
YYD2_k127_2972617_3 enoyl-CoA hydratase - - - 0.000000000000000006412 84.0
YYD2_k127_2974228_0 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008779 291.0
YYD2_k127_2974228_1 deoxyribose-phosphate aldolase activity K00852,K01619,K01840,K01844 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 2.7.1.15,4.1.2.4,5.4.2.8,5.4.3.3 0.0000000000000000000000000000000000000000000000000000000000000003536 230.0
YYD2_k127_2974228_2 galactose-6-phosphate isomerase activity K00761,K01808 - 2.4.2.9,5.3.1.6 0.0000000000000000000000000000000000000000009403 166.0
YYD2_k127_2974228_3 5'-nucleotidase, C-terminal domain K01081 - 3.1.3.5 0.000005756 52.0
YYD2_k127_297938_0 Peptidase M16 - - - 1.661e-300 940.0
YYD2_k127_297938_1 Penicillin amidase K01434 - 3.5.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 594.0
YYD2_k127_297938_2 Tricorn protease homolog K08676 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 360.0
YYD2_k127_297938_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009368 313.0
YYD2_k127_297938_4 Protein of unknown function (DUF541) - - - 0.0000000000000000000000000000000000003043 152.0
YYD2_k127_297938_5 Glycosyl transferases group 1 - - - 0.00000000000000000000000005353 119.0
YYD2_k127_297938_6 protein conserved in bacteria K09955 - - 0.000000707 55.0
YYD2_k127_297938_7 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 0.00005842 50.0
YYD2_k127_297938_8 Class III cytochrome C family - - - 0.0001038 51.0
YYD2_k127_2989480_0 Alpha-L-arabinofuranosidase C-terminus K01209 - 3.2.1.55 7.759e-201 642.0
YYD2_k127_2989480_1 Transporter-associated region K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003837 518.0
YYD2_k127_2989480_2 Oligogalacturonate lyase K01730 - 4.2.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 497.0
YYD2_k127_2989480_3 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001012 263.0
YYD2_k127_2989480_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002142 275.0
YYD2_k127_2989480_5 BON domain - - - 0.000000000000000000000000000000000000002912 154.0
YYD2_k127_2989480_6 Domain of unknown function (DUF4440) - - - 0.00000000000000000000000006439 111.0
YYD2_k127_2989480_7 PFAM Response regulator receiver domain - - - 0.0000000000000000009058 88.0
YYD2_k127_2990309_0 protease with the C-terminal PDZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 316.0
YYD2_k127_2990309_1 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006185 300.0
YYD2_k127_2990309_2 TIGRFAM thioredoxin K03672 - 1.8.1.8 0.0000000000000000000000000000000000000000000001439 172.0
YYD2_k127_2990309_3 Protein of unknown function (DUF3298) - - - 0.000000000000000000000000007287 124.0
YYD2_k127_2990309_4 triphosphatase activity - - - 0.000000000000000000000008867 109.0
YYD2_k127_2990309_5 Protein of unknown function (DUF2905) - - - 0.000000000000000007915 85.0
YYD2_k127_2997649_0 Fumarate reductase flavoprotein C-term K00239 GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0022900,GO:0044237,GO:0045333,GO:0055114 1.3.5.1,1.3.5.4 5.087e-274 856.0
YYD2_k127_2997649_1 Subtilase family - - - 1.291e-232 760.0
YYD2_k127_2997649_10 oxidoreductase activity K00337,K03333,K04771,K07114 - 1.1.3.6,1.6.5.3,3.4.21.107 0.00000000000006522 87.0
YYD2_k127_2997649_11 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000001007 65.0
YYD2_k127_2997649_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 465.0
YYD2_k127_2997649_3 Penicillin amidase K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 376.0
YYD2_k127_2997649_4 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005061 337.0
YYD2_k127_2997649_5 Belongs to the amidase family K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 323.0
YYD2_k127_2997649_6 SPFH Band 7 PHB domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004649 299.0
YYD2_k127_2997649_7 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.000000000000000000000000000000000000000000000001108 182.0
YYD2_k127_2997649_8 Penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000311 155.0
YYD2_k127_2997649_9 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000000000000004963 138.0
YYD2_k127_3000199_0 ABC transporter K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007528 538.0
YYD2_k127_3000482_0 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 394.0
YYD2_k127_3002869_0 Serine aminopeptidase, S33 K07019 - - 0.00000000000000000000000000000000004575 140.0
YYD2_k127_3002869_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.00000000000031 82.0
YYD2_k127_3004833_0 amino acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 312.0
YYD2_k127_3004833_1 amino acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 285.0
YYD2_k127_3006839_0 Ribosomal protein S1 K02945 - - 2.664e-205 652.0
YYD2_k127_3006839_1 metal-dependent phosphohydrolase 7TM intracellular region K07037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000877 331.0
YYD2_k127_3006839_2 HIT domain K19710 - 2.7.7.53 0.000000000000000000000000000000000000000000000000005905 186.0
YYD2_k127_3006839_3 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.00000000000000000000000000000004441 128.0
YYD2_k127_3011575_0 RNA polymerase, sigma subunit, ECF family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 545.0
YYD2_k127_3011575_1 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000000004481 186.0
YYD2_k127_3011575_2 RNA signal recognition particle 4.5S RNA - - - 0.00000000000000000000000000000000000000000007671 162.0
YYD2_k127_3011575_3 DoxX-like family - - - 0.0000000000000000000000000000000000009586 142.0
YYD2_k127_3011575_4 response to abiotic stimulus K03086 - - 0.0000000000000000000000003454 106.0
YYD2_k127_3011575_5 Tetratricopeptide repeat - - - 0.000000000000000000000004078 108.0
YYD2_k127_3011576_0 PFAM pentapeptide repeat protein - - - 0.0000000000000000002659 100.0
YYD2_k127_3011576_1 Polymer-forming cytoskeletal - - - 0.0003596 49.0
YYD2_k127_3032801_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 510.0
YYD2_k127_3032801_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000001941 202.0
YYD2_k127_3032801_2 IgA Peptidase M64 - - - 0.00000000000005859 76.0
YYD2_k127_3032801_3 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP) K06153 - 3.6.1.27 0.00000005622 55.0
YYD2_k127_3042869_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 3.143e-301 949.0
YYD2_k127_3042869_1 ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component - - - 0.00000000004039 65.0
YYD2_k127_30456_0 Photosynthesis system II assembly factor YCF48 - - - 0.00000000000000000000000000000000000001775 156.0
YYD2_k127_30456_1 Vault protein inter-alpha-trypsin domain K07114 - - 0.00000000000000000000000000003027 124.0
YYD2_k127_3047004_0 Cys/Met metabolism PLP-dependent enzyme K01760,K17217 - 4.4.1.1,4.4.1.2,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 496.0
YYD2_k127_3047004_1 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000001432 217.0
YYD2_k127_3047004_2 NfeD-like C-terminal, partner-binding - - - 0.000000000000000001096 92.0
YYD2_k127_3047004_3 Proline dehydrogenase K00318 - - 0.000000000000000009447 82.0
YYD2_k127_3047004_4 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000001316 53.0
YYD2_k127_3061032_0 peptide catabolic process - - - 3.064e-224 708.0
YYD2_k127_3061032_1 alpha amylase, catalytic region - - - 4.389e-221 694.0
YYD2_k127_3061032_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 440.0
YYD2_k127_3061032_3 RimK-like ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 314.0
YYD2_k127_3061032_4 - - - - 0.00000000000000000000000000000000000000000000000000000000002326 214.0
YYD2_k127_3061032_5 Lanthionine synthetase C family protein - - - 0.000000000000000000000000000000000000000000000009136 183.0
YYD2_k127_3061032_6 Lanthionine synthetase C family protein - - - 0.000000000000000000000000000000000002029 152.0
YYD2_k127_3061032_7 Glycogen debranching enzyme - - - 0.0000000000000001782 81.0
YYD2_k127_3063885_0 Male sterility protein K01897 - 6.2.1.3 4.447e-316 1003.0
YYD2_k127_3065078_0 UDP-glucoronosyl and UDP-glucosyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002182 249.0
YYD2_k127_3065078_1 ABC-type molybdate transport system, permease component K02018 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000001982 228.0
YYD2_k127_3065078_2 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000000001479 160.0
YYD2_k127_3065078_3 membrane K08984 - - 0.000008623 55.0
YYD2_k127_3081358_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 524.0
YYD2_k127_3081358_1 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 509.0
YYD2_k127_3081358_2 homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 358.0
YYD2_k127_3081358_3 Phytochrome region - GO:0003674,GO:0006464,GO:0006807,GO:0007154,GO:0007165,GO:0007602,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009585,GO:0009605,GO:0009628,GO:0009639,GO:0009881,GO:0009883,GO:0009987,GO:0010017,GO:0018298,GO:0019538,GO:0023052,GO:0036211,GO:0038023,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0050896,GO:0051606,GO:0051716,GO:0060089,GO:0065007,GO:0071214,GO:0071478,GO:0071482,GO:0071489,GO:0071704,GO:0104004,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 362.0
YYD2_k127_3081358_4 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 GO:0000287,GO:0003674,GO:0003824,GO:0004799,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006231,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009157,GO:0009162,GO:0009165,GO:0009176,GO:0009177,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009314,GO:0009394,GO:0009628,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0032259,GO:0034641,GO:0034654,GO:0042083,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046073,GO:0046385,GO:0046483,GO:0046872,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 341.0
YYD2_k127_3081358_5 arsenate reductase (glutaredoxin) activity K00537 - 1.20.4.1 0.0000000000000000000000000000008684 123.0
YYD2_k127_3081358_6 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287,K18590 GO:0000166,GO:0003674,GO:0003824,GO:0004146,GO:0005488,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008144,GO:0008150,GO:0008152,GO:0016491,GO:0016645,GO:0016646,GO:0019842,GO:0031406,GO:0033218,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050661,GO:0050662,GO:0050896,GO:0051870,GO:0051871,GO:0055114,GO:0070401,GO:0070402,GO:0072341,GO:0097159,GO:1901265,GO:1901363 1.5.1.3 0.0000000000000000000000000001475 121.0
YYD2_k127_3081358_7 PAS PAC domain-like protein - - - 0.00000000254 68.0
YYD2_k127_3089040_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 4e-323 1007.0
YYD2_k127_3089040_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 349.0
YYD2_k127_3089040_2 lysine biosynthetic process via aminoadipic acid - - - 0.00000005566 63.0
YYD2_k127_308986_0 domain protein - - - 0.0 1110.0
YYD2_k127_308986_1 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006602 280.0
YYD2_k127_308986_2 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000002126 160.0
YYD2_k127_3097651_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1513.0
YYD2_k127_3097651_1 formate C-acetyltransferase glycine radical K00656 - 2.3.1.54 0.0 1244.0
YYD2_k127_3097651_2 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006938 569.0
YYD2_k127_3097651_3 Asparaginase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005533 514.0
YYD2_k127_3097651_4 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005109 334.0
YYD2_k127_3097651_5 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003817 310.0
YYD2_k127_3101890_0 AAA ATPase domain - - - 1.689e-215 698.0
YYD2_k127_3101890_1 Hydantoinase/oxoprolinase K01473 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000592 597.0
YYD2_k127_3101890_2 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007097 351.0
YYD2_k127_3101890_3 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004012 278.0
YYD2_k127_3101890_4 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000008046 260.0
YYD2_k127_3101890_5 glycolate biosynthetic process K01091,K06019,K13292 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.1.3.18,3.6.1.1 0.000000000000000000000000000000000000000000000002119 182.0
YYD2_k127_3107573_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.0 1376.0
YYD2_k127_3107573_1 formate dehydrogenase K00124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 336.0
YYD2_k127_3107573_2 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004447 299.0
YYD2_k127_3107573_3 formate dehydrogenase K00127,K08350 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006091,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009326,GO:0009987,GO:0015942,GO:0015944,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0020037,GO:0022900,GO:0031224,GO:0031226,GO:0032787,GO:0032991,GO:0033554,GO:0036397,GO:0043436,GO:0044237,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0050896,GO:0051716,GO:0052738,GO:0055114,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1902494 - 0.000000000000000000000000000000000000000000002475 173.0
YYD2_k127_3107573_4 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000000000000000000000002613 146.0
YYD2_k127_3107573_5 protein involved in formate dehydrogenase formation K02380 - - 0.000000000000000000000000000005238 129.0
YYD2_k127_3107573_6 Belongs to the MIP aquaporin (TC 1.A.8) family - - - 0.0000000000007676 70.0
YYD2_k127_3111406_0 COG1078 HD superfamily phosphohydrolases K06885 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007718 306.0
YYD2_k127_3111406_1 Carboxypeptidase regulatory-like domain - - - 0.00000000000002199 79.0
YYD2_k127_3111406_2 Carboxypeptidase regulatory-like domain - - - 0.000003178 56.0
YYD2_k127_3111406_3 Periplasmic protein TonB links inner and outer membranes - - - 0.00003188 55.0
YYD2_k127_3129321_0 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006269 373.0
YYD2_k127_3129321_1 PFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000003921 239.0
YYD2_k127_3129321_2 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 GO:0000726,GO:0003674,GO:0003824,GO:0003953,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006303,GO:0006464,GO:0006471,GO:0006476,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0016787,GO:0016798,GO:0016799,GO:0019213,GO:0019538,GO:0030312,GO:0033554,GO:0033558,GO:0034641,GO:0034979,GO:0035601,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070213,GO:0071214,GO:0071478,GO:0071479,GO:0071704,GO:0071944,GO:0090304,GO:0098732,GO:0104004,GO:0140096,GO:1901360,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000004468 216.0
YYD2_k127_3129321_3 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.00000000000000000000000000000000006273 140.0
YYD2_k127_3138797_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 292.0
YYD2_k127_3138797_1 Late control gene D protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002459 288.0
YYD2_k127_3138797_2 Baseplate assembly protein - - - 0.000000000000000000000000000000000000000000000000009938 185.0
YYD2_k127_3138797_3 Domain of unknown function (DUF4157) - - - 0.0000000000000000000000000000000000000000003463 179.0
YYD2_k127_3138797_4 - - - - 0.00000000000000000000004964 102.0
YYD2_k127_3142289_0 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 370.0
YYD2_k127_3142289_1 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 342.0
YYD2_k127_3142289_2 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001814 251.0
YYD2_k127_3142289_3 - - - - 0.00000000000000000000000000000000000000000000000002436 182.0
YYD2_k127_3142289_4 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000001564 145.0
YYD2_k127_3142289_5 Protein of unknown function, DUF393 - - - 0.0000000000000000000000000000267 121.0
YYD2_k127_3142289_6 FAD binding domain - - - 0.00000000000000266 79.0
YYD2_k127_3148813_0 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000731 305.0
YYD2_k127_3148813_1 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000007101 165.0
YYD2_k127_3151569_0 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 480.0
YYD2_k127_3151569_1 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005114 434.0
YYD2_k127_3152314_0 Acyltransferase - - - 0.0000000000000000000000000000000000000000000000000265 194.0
YYD2_k127_3152314_1 metal cluster binding - - - 0.0000000000000000000000000000000000004548 148.0
YYD2_k127_3152314_2 YCII-related domain - - - 0.00000000000000000004397 99.0
YYD2_k127_3152314_3 - - - - 0.0000000001753 64.0
YYD2_k127_3152314_4 Iron-binding zinc finger CDGSH type - - - 0.0009721 46.0
YYD2_k127_3154333_0 PFAM Permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006002 579.0
YYD2_k127_3154333_1 PFAM Peptidase S10, serine carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 549.0
YYD2_k127_3154333_2 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431 - 3.5.1.6 0.00000000000000000000000000000000000000000000000000000000003744 207.0
YYD2_k127_3154333_3 Protein of unknown function (DUF3303) - - - 0.0000000000000000000000000004629 117.0
YYD2_k127_3156770_0 PFAM ABC transporter related K06020 - 3.6.3.25 1.133e-302 934.0
YYD2_k127_3156770_1 - - - - 0.0000000000000000000000000003507 126.0
YYD2_k127_3156770_2 protein homotetramerization - - - 0.0000000000000002054 81.0
YYD2_k127_3157359_0 lysine biosynthetic process via aminoadipic acid - - - 0.000005772 51.0
YYD2_k127_3173323_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 382.0
YYD2_k127_3173323_1 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000004081 221.0
YYD2_k127_3173323_2 cheY-homologous receiver domain - - - 0.000000000000000000000277 101.0
YYD2_k127_3173394_0 glycosyl hydrolase, family 3 K05349 - 3.2.1.21 0.0 1029.0
YYD2_k127_3173394_1 Belongs to the IlvD Edd family K01687,K22186 - 4.2.1.82,4.2.1.9 3.71e-265 826.0
YYD2_k127_3173394_2 PFAM glycoside hydrolase, family 29 K01206 - 3.2.1.51 5.23e-196 619.0
YYD2_k127_3173394_3 amidohydrolase K07046 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008268 286.0
YYD2_k127_3173394_4 dehydrogenases and related proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000416 241.0
YYD2_k127_3175404_0 Threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000004881 239.0
YYD2_k127_3175404_1 phosphomethylpyrimidine kinase activity K00941,K03147,K14153 - 2.5.1.3,2.7.1.49,2.7.4.7,4.1.99.17 0.00000000000000000000000000000000000000000000000000000008982 205.0
YYD2_k127_3175404_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000006198 179.0
YYD2_k127_3175404_3 CHRD domain - - - 0.000000000000000000000000000000000003863 143.0
YYD2_k127_3175404_4 HAD-superfamily hydrolase, subfamily IIB - - - 0.0000000000000000000000000000000001624 143.0
YYD2_k127_3175404_5 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000001715 141.0
YYD2_k127_3175404_6 Tetratricopeptide repeat - - - 0.0000000000000000000009651 108.0
YYD2_k127_3178096_0 Belongs to the peptidase M16 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004398 353.0
YYD2_k127_3178096_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000003227 223.0
YYD2_k127_3178096_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000001217 169.0
YYD2_k127_3178096_3 TonB-dependent receptor - - - 0.000006775 59.0
YYD2_k127_3179315_0 4Fe-4S dicluster domain K17723 - 1.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 445.0
YYD2_k127_3179315_1 Exodeoxyribonuclease iii K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007476 305.0
YYD2_k127_3179315_2 Peptidase dimerisation domain K01295 - 3.4.17.11 0.000000000000000000000000000000000000000000000000000000000000000000000000007398 260.0
YYD2_k127_3179461_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046033,GO:0046040,GO:0046085,GO:0046086,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 477.0
YYD2_k127_3179461_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 400.0
YYD2_k127_3179461_2 Peptidase family S41 - - - 0.00000000000000000000001561 111.0
YYD2_k127_3184643_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004672 394.0
YYD2_k127_3184643_1 Domain of unknown function (DUF3488) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001528 288.0
YYD2_k127_3184643_2 Glutamine cyclotransferase K00683 - 2.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000001226 266.0
YYD2_k127_3184643_3 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000008341 130.0
YYD2_k127_3184643_4 - - - - 0.00000000000001655 84.0
YYD2_k127_3184643_5 Protein of unknown function (DUF2846) - - - 0.0003338 52.0
YYD2_k127_3186810_0 NYN domain - - - 0.0000000000000000000000000000000000000000000000000000000001527 213.0
YYD2_k127_3186810_1 Uncharacterized conserved protein (DUF2203) - - - 0.000000000000000000003164 98.0
YYD2_k127_3186810_2 RDD family - - - 0.0008873 51.0
YYD2_k127_3192620_0 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 488.0
YYD2_k127_3192620_1 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003051 368.0
YYD2_k127_3192620_2 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000003323 203.0
YYD2_k127_3192620_3 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000001707 106.0
YYD2_k127_319691_0 Domain of unknown function (DUF1858) - - - 0.000000000000000000000000000000000000000000000000000000000000001084 238.0
YYD2_k127_319759_0 Protein of unknown function (DUF763) K09003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 593.0
YYD2_k127_319759_1 chlorophyll binding - - - 0.0000000000000000000000000000000000000000000000000000001941 206.0
YYD2_k127_319759_2 2OG-Fe(II) oxygenase superfamily K07336,K07394 - - 0.00000000000000000000000000000000008922 142.0
YYD2_k127_319759_3 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000003857 111.0
YYD2_k127_3199935_0 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 475.0
YYD2_k127_3199935_1 hydrolase of the alpha beta superfamily K07017 - - 0.000000000000000000000006089 109.0
YYD2_k127_3213307_0 DNA polymerase K02335 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 300.0
YYD2_k127_3213307_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000005511 197.0
YYD2_k127_3213307_2 Cupin 2, conserved barrel domain protein - - - 0.0000000000008209 72.0
YYD2_k127_3213307_3 DinB family - - - 0.00000005019 63.0
YYD2_k127_3226178_0 hydrolase activity, acting on ester bonds K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 455.0
YYD2_k127_3226178_1 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000000000000000000000000000001425 229.0
YYD2_k127_3226178_2 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000000000002257 169.0
YYD2_k127_3226178_3 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000891 111.0
YYD2_k127_3226178_5 Endonuclease/Exonuclease/phosphatase family - - - 0.00001358 57.0
YYD2_k127_3233502_0 metallocarboxypeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 432.0
YYD2_k127_3238038_0 ABC-type transport system involved in lipoprotein release permease component K02004 - - 3.043e-295 926.0
YYD2_k127_3238038_1 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 359.0
YYD2_k127_3238038_2 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000006032 168.0
YYD2_k127_3238038_3 Universal stress protein family - - - 0.0000000000000000000000000000002869 135.0
YYD2_k127_3238038_4 CoA-binding K09181 - - 0.0000000000000000000000001817 108.0
YYD2_k127_3238038_5 HlyD family secretion protein K02005,K13888 - - 0.000000000000000000000000208 108.0
YYD2_k127_3238038_6 AMP binding - - - 0.00000002522 59.0
YYD2_k127_3242619_0 Protein of unknown function (DUF2891) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 454.0
YYD2_k127_3242619_1 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000006217 267.0
YYD2_k127_3242619_2 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000003212 232.0
YYD2_k127_3242619_3 penicillin binding - - - 0.0000000000000000000000000000000000000000000000001066 198.0
YYD2_k127_3242619_4 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000008328 175.0
YYD2_k127_3242619_5 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000163 170.0
YYD2_k127_3242619_7 Belongs to the universal stress protein A family - - - 0.0000000000009013 79.0
YYD2_k127_3242619_8 AI-2E family transporter - - - 0.00000109 51.0
YYD2_k127_3259239_0 COG NOG06097 non supervised orthologous group - - - 8.482e-244 780.0
YYD2_k127_3261251_0 Tricorn protease PDZ domain K08676 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 438.0
YYD2_k127_3261251_1 - - - - 0.00000000000000004343 87.0
YYD2_k127_3270355_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 397.0
YYD2_k127_3270355_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000003698 267.0
YYD2_k127_3270355_10 SNARE associated Golgi protein - - - 0.00001466 55.0
YYD2_k127_3270355_2 Peptidase family M50 K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001751 265.0
YYD2_k127_3270355_3 orotate phosphoribosyltransferase activity K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000223 228.0
YYD2_k127_3270355_4 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000005599 198.0
YYD2_k127_3270355_5 EXOIII K02342 - 2.7.7.7 0.00000000000000000000000000000000000000008671 162.0
YYD2_k127_3270355_6 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000000000000004331 154.0
YYD2_k127_3270355_7 PFAM SNARE associated Golgi protein - - - 0.00000000000000000001422 100.0
YYD2_k127_3270355_8 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000002727 76.0
YYD2_k127_3270355_9 - - - - 0.00000000001896 75.0
YYD2_k127_3272525_0 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 449.0
YYD2_k127_3272525_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000007151 59.0
YYD2_k127_3274184_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000438 569.0
YYD2_k127_3274184_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000002009 206.0
YYD2_k127_3274184_2 Trypsin-like serine protease - - - 0.0000000118 62.0
YYD2_k127_3280619_0 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 320.0
YYD2_k127_3280619_1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.00000000000000000000000000000001496 134.0
YYD2_k127_3280619_2 endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000008846 128.0
YYD2_k127_3280619_3 PFAM Enoyl-CoA hydratase isomerase - - - 0.000000000000000000000000000003507 121.0
YYD2_k127_3280619_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0000000000000006276 87.0
YYD2_k127_3280619_5 Redoxin domain protein - - - 0.00000004399 63.0
YYD2_k127_328434_0 Chlorite dismutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000371 283.0
YYD2_k127_328434_1 COG4993 Glucose dehydrogenase - - - 0.000000037 61.0
YYD2_k127_3295687_0 Na dependent nucleoside transporter K03317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003528 361.0
YYD2_k127_3295687_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000008403 237.0
YYD2_k127_3295687_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000003337 230.0
YYD2_k127_3295687_3 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.00000000000000001478 83.0
YYD2_k127_3295687_4 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A K02876 - - 0.00000000004885 65.0
YYD2_k127_33089_0 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006336 375.0
YYD2_k127_33089_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000002147 198.0
YYD2_k127_33089_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000002144 175.0
YYD2_k127_33089_3 Domain of unknown function (DUF4440) - - - 0.000000651 59.0
YYD2_k127_3311642_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 411.0
YYD2_k127_3311642_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 351.0
YYD2_k127_3316624_0 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 427.0
YYD2_k127_3316624_1 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.000000000000000000000000000000000000000001247 160.0
YYD2_k127_3324405_0 Two component regulator propeller - - - 2.788e-253 813.0
YYD2_k127_3346047_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000007886 202.0
YYD2_k127_3346047_1 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000003784 181.0
YYD2_k127_3364560_0 Lamin Tail Domain K07004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 425.0
YYD2_k127_3364560_1 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000009028 231.0
YYD2_k127_3394132_0 SMART Elongator protein 3 MiaB NifB - - - 3.339e-243 760.0
YYD2_k127_3394132_1 Peptidase dimerisation domain K01436 - - 0.0000000000000000003021 89.0
YYD2_k127_3394132_2 - - - - 0.000001888 50.0
YYD2_k127_3406621_0 cell adhesion involved in biofilm formation K02014,K11031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004879 271.0
YYD2_k127_3417636_0 asparaginase K01424,K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.1,3.5.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009973 460.0
YYD2_k127_3417636_1 Peptidase dimerisation domain K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 422.0
YYD2_k127_3417636_2 COG0515 Serine threonine protein K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000002616 259.0
YYD2_k127_3417636_3 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000000000000000000002126 228.0
YYD2_k127_3417636_4 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000000000002492 214.0
YYD2_k127_3417636_5 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000000000000000001147 216.0
YYD2_k127_3417636_6 Glyoxalase-like domain K06996 - - 0.000000000000000000000000000000000000000000000000000003179 192.0
YYD2_k127_3417636_7 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000006314 187.0
YYD2_k127_3417636_8 PFAM PHP domain K02347 - - 0.000000000000000000000000000248 119.0
YYD2_k127_3426370_0 homolog of phage Mu protein gp47 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 462.0
YYD2_k127_3426370_1 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 309.0
YYD2_k127_3426370_2 homolog of phage Mu protein gp47 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 307.0
YYD2_k127_342674_0 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 483.0
YYD2_k127_342674_1 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 332.0
YYD2_k127_342674_2 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 291.0
YYD2_k127_342674_3 Phosphoribulokinase / Uridine kinase family K00855,K00876 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.19,2.7.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000003848 254.0
YYD2_k127_342674_4 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.00000000000000000000000000000000000000000004115 164.0
YYD2_k127_342674_5 energy transducer activity K03832 - - 0.0000106 57.0
YYD2_k127_3430118_0 two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 532.0
YYD2_k127_3430118_1 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 460.0
YYD2_k127_3430118_10 cheY-homologous receiver domain - - - 0.00000000000000000000000003786 112.0
YYD2_k127_3430118_2 signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004499 396.0
YYD2_k127_3430118_3 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 377.0
YYD2_k127_3430118_4 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005554 335.0
YYD2_k127_3430118_5 Enoyl-(Acyl carrier protein) reductase K00034,K03366 - 1.1.1.304,1.1.1.47,1.1.1.76 0.000000000000000000000000000000000000000000000000000002995 199.0
YYD2_k127_3430118_6 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000001261 156.0
YYD2_k127_3430118_7 Radical SAM K22227 - - 0.00000000000000000000000000000000000007884 157.0
YYD2_k127_3430118_8 PFAM Abortive infection protein K07052 - - 0.000000000000000000000000000000007037 139.0
YYD2_k127_3430118_9 Monogalactosyldiacylglycerol (MGDG) synthase K03715 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0006643,GO:0006664,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008194,GO:0008378,GO:0009267,GO:0009507,GO:0009526,GO:0009527,GO:0009536,GO:0009605,GO:0009707,GO:0009941,GO:0009987,GO:0009991,GO:0016020,GO:0016036,GO:0016740,GO:0016757,GO:0016758,GO:0019374,GO:0019752,GO:0019867,GO:0031090,GO:0031667,GO:0031668,GO:0031669,GO:0031967,GO:0031968,GO:0031969,GO:0031975,GO:0032787,GO:0033554,GO:0035250,GO:0042170,GO:0042594,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0098588,GO:0098805,GO:1901135,GO:1903509 2.4.1.46 0.0000000000000000000000000000001483 138.0
YYD2_k127_3436867_0 PFAM FAD dependent oxidoreductase - - - 2.021e-209 662.0
YYD2_k127_3436867_1 Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005206 441.0
YYD2_k127_3436867_11 - - - - 0.00000000002462 67.0
YYD2_k127_3436867_12 gas vesicle protein - - - 0.000000001363 64.0
YYD2_k127_3436867_2 Arsenical pump-driving ATPase K01551 - 3.6.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004092 388.0
YYD2_k127_3436867_3 heat shock protein binding K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 334.0
YYD2_k127_3436867_4 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000003229 253.0
YYD2_k127_3436867_5 Gas vesicle synthesis protein GvpL/GvpF - - - 0.00000000000000000000000000000005884 136.0
YYD2_k127_3436867_6 Plasmid stabilization - - - 0.0000000000000000000000000008549 114.0
YYD2_k127_3436867_7 SMART Cold shock protein K03704 - - 0.00000000000000000009463 88.0
YYD2_k127_3436867_8 Gas vesicle synthesis protein GvpL/GvpF - - - 0.00000000000000005221 90.0
YYD2_k127_3436867_9 - - - - 0.000000000000001822 78.0
YYD2_k127_3443095_0 B12 binding domain - - - 9.451e-233 732.0
YYD2_k127_3443095_1 PFAM Peptidase M1 membrane alanine aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 421.0
YYD2_k127_3443095_2 PFAM Magnesium chelatase, ChlI subunit K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000902 216.0
YYD2_k127_3443095_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000003782 214.0
YYD2_k127_3443095_4 - - - - 0.0000000000000497 83.0
YYD2_k127_3443095_5 Putative zinc-finger K03088 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000002845 57.0
YYD2_k127_3443095_6 Putative adhesin - - - 0.00004911 54.0
YYD2_k127_3453343_0 PFAM NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 456.0
YYD2_k127_3453343_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 351.0
YYD2_k127_3453343_2 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000001646 223.0
YYD2_k127_3453343_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000008131 179.0
YYD2_k127_3453343_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000007282 128.0
YYD2_k127_3453343_5 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000000000000001605 123.0
YYD2_k127_3458766_0 AMP-binding enzyme K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 438.0
YYD2_k127_3472541_0 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 589.0
YYD2_k127_3472541_1 Inhibitor of apoptosis-promoting Bax1 K06890 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000005088 214.0
YYD2_k127_3472541_2 Hexapeptide repeat of succinyl-transferase K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000001909 177.0
YYD2_k127_3472541_3 - - - - 0.000000000000000000000000000000000000006448 154.0
YYD2_k127_3472541_4 polysaccharide deacetylase - - - 0.000000000000000000002107 106.0
YYD2_k127_3473283_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 537.0
YYD2_k127_3475012_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 5.824e-195 639.0
YYD2_k127_3475012_1 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 357.0
YYD2_k127_3475012_2 Histidine kinase-like ATPase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 293.0
YYD2_k127_3475012_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000001125 223.0
YYD2_k127_3475012_4 serine threonine protein kinase - - - 0.00000000000000000000219 98.0
YYD2_k127_3479612_0 Domain of Unknown function (DUF542) K07322 - - 0.00000000000000000000000000000000000000000000000000000000000000000001232 241.0
YYD2_k127_3479612_1 Tfp pilus assembly protein FimV - - - 0.000000000000000003581 93.0
YYD2_k127_3479612_2 Domain of unknown function (DUF1858) - - - 0.00000000000004975 76.0
YYD2_k127_3493355_0 Arylsulfatase a K01133 - 3.1.6.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008517 463.0
YYD2_k127_3493355_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 373.0
YYD2_k127_3493355_2 Putative peptidoglycan binding domain - - - 0.00000000000000000006585 96.0
YYD2_k127_3493355_3 - - - - 0.00001126 49.0
YYD2_k127_3495952_0 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005699 469.0
YYD2_k127_3495952_1 xylose isomerase activity K01805 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009045,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019323,GO:0042732,GO:0042843,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046365,GO:0071704,GO:1901575 5.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 383.0
YYD2_k127_3495952_2 Galactokinase galactose-binding signature K00849 - 2.7.1.6 0.0000000000000000000000000000000000000000000000001526 182.0
YYD2_k127_3512418_0 TonB-dependent Receptor Plug Domain K02014,K16092 - - 0.0000000000000000000000000000000000000000000000000000001605 207.0
YYD2_k127_3512418_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.00000000000000000000000001099 112.0
YYD2_k127_3512418_3 PFAM amino acid-binding ACT domain protein K00027 - 1.1.1.38 0.000000003358 58.0
YYD2_k127_3520402_0 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006349 473.0
YYD2_k127_3520402_1 DinB superfamily - - - 0.000000000000000648 78.0
YYD2_k127_3520402_2 LexA-binding, inner membrane-associated putative hydrolase K07038 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00003169 54.0
YYD2_k127_3556510_0 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005797 419.0
YYD2_k127_3556510_1 Fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009726 355.0
YYD2_k127_3556510_10 Probable zinc-ribbon domain - - - 0.0000000000000000001614 93.0
YYD2_k127_3556510_11 D12 class N6 adenine-specific DNA methyltransferase K07318 - 2.1.1.72 0.00000000005136 73.0
YYD2_k127_3556510_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 310.0
YYD2_k127_3556510_3 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007741 308.0
YYD2_k127_3556510_4 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005766 278.0
YYD2_k127_3556510_5 PFAM phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006924 253.0
YYD2_k127_3556510_6 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000806 239.0
YYD2_k127_3556510_7 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000001712 211.0
YYD2_k127_3556510_8 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000000000000000000000008624 181.0
YYD2_k127_3556510_9 PFAM Metal-dependent phosphohydrolase, HD - - - 0.000000000000000000000000000000000005197 145.0
YYD2_k127_3561668_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 4.427e-215 675.0
YYD2_k127_3561668_1 sequence-specific DNA binding K01697,K01738 GO:0003674,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008144,GO:0016020,GO:0019842,GO:0030170,GO:0030312,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0071944,GO:0097159,GO:1901363 2.5.1.47,4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005599 520.0
YYD2_k127_3561668_2 C-terminal, D2-small domain, of ClpB protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 457.0
YYD2_k127_3561668_3 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007993 451.0
YYD2_k127_3561668_4 Ornithine cyclodeaminase/mu-crystallin family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008327 299.0
YYD2_k127_3561668_5 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000006587 184.0
YYD2_k127_3561668_6 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000024 89.0
YYD2_k127_3561668_7 PBS lyase HEAT-like repeat - - - 0.000000000000008732 84.0
YYD2_k127_3573918_0 PFAM Peptidase M16 inactive domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 311.0
YYD2_k127_3573918_1 Peptidase M16 inactive domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 310.0
YYD2_k127_3574634_0 Tricorn protease homolog - - - 0.0 1304.0
YYD2_k127_3574634_1 DinB family - - - 0.0000000000000000000000000000000000000000000000000000000009904 206.0
YYD2_k127_3574634_2 RNA 2'-phosphotransferase, Tpt1 / KptA family K07559 - - 0.00000000000000000000000000000000000000000000000000000002067 201.0
YYD2_k127_3578519_0 MacB-like periplasmic core domain - - - 4.956e-202 659.0
YYD2_k127_3578519_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 293.0
YYD2_k127_3578519_2 DnaJ molecular chaperone homology domain - - - 0.0000000000000000000000000000000000008664 145.0
YYD2_k127_3578519_3 Amidohydrolase family - - - 0.000000000000000000000000000000000004229 148.0
YYD2_k127_3578519_4 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000004418 133.0
YYD2_k127_3580131_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 454.0
YYD2_k127_3580131_1 Involved in the tonB-independent uptake of proteins K03641 - - 0.0000000000000003075 93.0
YYD2_k127_3580131_2 Glycosyltransferase Family 4 - - - 0.000000008573 63.0
YYD2_k127_3588167_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000003173 248.0
YYD2_k127_3607250_0 Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000748 445.0
YYD2_k127_3607250_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 406.0
YYD2_k127_3607250_10 protein homotetramerization - - - 0.000000000000000000000000000000000000001679 157.0
YYD2_k127_3607250_11 HD domain K07023 - - 0.00000000000000000000000000000000002668 142.0
YYD2_k127_3607250_12 Belongs to the bacterial histone-like protein family K03530 - - 0.000000000000000000000000000000002558 132.0
YYD2_k127_3607250_13 - - - - 0.000000000000000000000000005049 115.0
YYD2_k127_3607250_14 - catabolite gene activator and regulatory subunit of cAMP-dependent protein K10914 - - 0.00000000000000000000001585 109.0
YYD2_k127_3607250_15 cell redox homeostasis K02199 - - 0.00000000000000000009223 96.0
YYD2_k127_3607250_16 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000004003 79.0
YYD2_k127_3607250_17 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000005813 80.0
YYD2_k127_3607250_2 Domain of unknown function (DUF2088) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 310.0
YYD2_k127_3607250_3 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007642 280.0
YYD2_k127_3607250_4 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007435 272.0
YYD2_k127_3607250_5 COG1230 Co Zn Cd efflux system component K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001793 259.0
YYD2_k127_3607250_6 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000005761 219.0
YYD2_k127_3607250_7 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000002024 201.0
YYD2_k127_3607250_8 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000007498 180.0
YYD2_k127_3607250_9 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000001071 184.0
YYD2_k127_362578_0 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 411.0
YYD2_k127_362578_1 oxidoreductase activity K00274 - 1.4.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004322 290.0
YYD2_k127_3640006_0 protoporphyrinogen oxidase activity K00231,K14266 - 1.14.19.9,1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 468.0
YYD2_k127_3640006_1 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 436.0
YYD2_k127_3640006_2 Spermine/spermidine synthase domain - - - 0.0000000000000000000000000000000000000000000000000001525 203.0
YYD2_k127_3640006_3 Domain of unknown function (DUF4440) - - - 0.0000002657 57.0
YYD2_k127_3659525_0 COG3119 Arylsulfatase A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 516.0
YYD2_k127_3659525_1 COG3119 Arylsulfatase A and related enzymes - - - 0.000000000000000000000000000000000000000000000000000000000000005046 220.0
YYD2_k127_3659525_2 ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated - - - 0.0000000000000821 74.0
YYD2_k127_3660910_0 Succinyl-CoA ligase like flavodoxin domain - - - 9.568e-310 974.0
YYD2_k127_3660910_1 Amidase K01426,K19176 - 3.5.1.4,3.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 493.0
YYD2_k127_3660910_2 nuclease activity - - - 0.00000000001044 67.0
YYD2_k127_3660910_3 Malic enzyme, NAD binding domain K00027,K00029,K22212 GO:0000166,GO:0003674,GO:0003824,GO:0004470,GO:0004471,GO:0004473,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006108,GO:0006113,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016051,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0019752,GO:0030145,GO:0032787,GO:0036094,GO:0043167,GO:0043169,GO:0043436,GO:0043464,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046872,GO:0046914,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.38,1.1.1.40,4.1.1.101 0.000008774 49.0
YYD2_k127_3684750_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000855 413.0
YYD2_k127_3684750_1 PFAM carbohydrate kinase K00848,K00879 - 2.7.1.5,2.7.1.51 0.000000000000000004379 88.0
YYD2_k127_3689704_0 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000007324 168.0
YYD2_k127_3689704_1 - - - - 0.00000000000000000000000000000004325 130.0
YYD2_k127_3689704_2 PFAM von Willebrand factor type A K07114,K12511 - - 0.00000000000000000000009663 109.0
YYD2_k127_3689704_3 Acts as a magnesium transporter K06213 - - 0.000000003335 57.0
YYD2_k127_3694474_0 Aconitase family (aconitate hydratase) K01681 - 4.2.1.3 0.0 1156.0
YYD2_k127_3695991_0 serine-type exopeptidase activity K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 8.543e-303 945.0
YYD2_k127_3753441_0 TonB-dependent receptor - - - 3.464e-217 715.0
YYD2_k127_3753441_1 FCD K05799 - - 0.0000000000000000000000000000000000000000000000000000000000000000001065 239.0
YYD2_k127_3753441_2 Glycosyl Hydrolase Family 88 K15532 - 3.2.1.172 0.00000000000000000000001789 101.0
YYD2_k127_3759360_0 Cytochrome b(N-terminal)/b6/petB K00410,K00412,K02635,K02637 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 468.0
YYD2_k127_3759360_1 Rieske [2Fe-2S] domain K00411,K02636,K03886 - 1.10.2.2,1.10.9.1 0.0000000000000000000000000000000000000000000000000000901 190.0
YYD2_k127_3759360_2 - - - - 0.00000000000000000000000000004025 134.0
YYD2_k127_376925_0 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007405 617.0
YYD2_k127_376925_1 alpha-L-rhamnosidase - - - 0.00000000000002002 74.0
YYD2_k127_376986_0 four-way junction helicase activity K03551 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 440.0
YYD2_k127_376986_1 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000000000000000000001645 188.0
YYD2_k127_376986_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000007628 181.0
YYD2_k127_3789713_0 Flavin-binding monooxygenase-like - - - 1.723e-214 676.0
YYD2_k127_3789713_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008322 364.0
YYD2_k127_3789713_2 Predicted nucleotidyltransferase - - - 0.000000000000009422 78.0
YYD2_k127_3789713_3 ankyrin repeat - - - 0.00001933 57.0
YYD2_k127_3789713_4 Tetratricopeptide repeat - - - 0.00006991 54.0
YYD2_k127_3791166_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 533.0
YYD2_k127_3791166_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005509 434.0
YYD2_k127_3791166_2 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 0.0003683 45.0
YYD2_k127_3792859_0 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006588 313.0
YYD2_k127_3792859_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000002005 277.0
YYD2_k127_3792859_2 - - - - 0.0008571 51.0
YYD2_k127_379588_0 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000002604 228.0
YYD2_k127_379588_1 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000000004228 207.0
YYD2_k127_3810440_0 UDP-N-acetylglucosamine 2-epimerase K08068,K18429 - 3.2.1.183,3.2.1.184 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 380.0
YYD2_k127_3810440_1 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007772 377.0
YYD2_k127_3810440_2 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008701 251.0
YYD2_k127_3810440_3 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000005088 226.0
YYD2_k127_3810440_4 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000000003747 223.0
YYD2_k127_3810440_5 TIGRFAM Sialic acid O-acyltransferase, NeuD - - - 0.00000000000000000000000000000000000000000000000000000000000005845 220.0
YYD2_k127_3810440_6 Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000002103 188.0
YYD2_k127_3810440_7 WbqC-like protein family - - - 0.00000000000000000000000000000000000000000005063 169.0
YYD2_k127_3810440_8 ADP-glyceromanno-heptose 6-epimerase activity K01784 - 5.1.3.2 0.00000000000000000000003668 108.0
YYD2_k127_3812779_0 Sodium:solute symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 569.0
YYD2_k127_3812779_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 442.0
YYD2_k127_3812779_2 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008918 314.0
YYD2_k127_3812779_3 Histidine kinase - - - 0.0000000000000000000000000000000000000003289 166.0
YYD2_k127_3812779_4 Two component, sigma54 specific, transcriptional regulator, Fis family K07712 - - 0.000000000000000000000000004773 116.0
YYD2_k127_3812779_5 Carboxypeptidase regulatory-like domain - - - 0.0001734 48.0
YYD2_k127_3816561_0 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 559.0
YYD2_k127_3816561_1 Domain of unknown function (DUF5117) - - - 0.00000001018 59.0
YYD2_k127_3818095_0 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005184 288.0
YYD2_k127_3818095_1 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000001859 219.0
YYD2_k127_3818095_2 - - - - 0.0000000000000000000000000000000000000000003529 165.0
YYD2_k127_3820334_0 Belongs to the PEP-utilizing enzyme family K01006,K01007 - 2.7.9.1,2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007354 297.0
YYD2_k127_3820334_1 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000000000000000000001705 204.0
YYD2_k127_3820447_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007224 516.0
YYD2_k127_3820447_1 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 361.0
YYD2_k127_3820447_2 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000001406 151.0
YYD2_k127_383522_0 Membrane - - - 0.0000000000000000000000000000000000143 152.0
YYD2_k127_3845554_0 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 477.0
YYD2_k127_3845554_1 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit K01768,K07315 - 3.1.3.3,4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 346.0
YYD2_k127_3845554_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000004776 239.0
YYD2_k127_3845554_3 Zn peptidase K21686 - - 0.0000000000000000000000004654 113.0
YYD2_k127_3845554_4 von Willebrand factor type A domain K07114 - - 0.000001444 61.0
YYD2_k127_3845554_5 sequence-specific DNA binding - - - 0.000004938 54.0
YYD2_k127_3850219_0 D-ala D-ala ligase N-terminus K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 317.0
YYD2_k127_3850219_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 304.0
YYD2_k127_3850219_2 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006424 289.0
YYD2_k127_3850219_3 PFAM Peptidase S41 K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000001855 231.0
YYD2_k127_3850219_4 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000005984 95.0
YYD2_k127_3850219_5 von Willebrand factor (vWF) type A domain - - - 0.000000000000003742 86.0
YYD2_k127_3850219_6 gag-polyprotein putative aspartyl protease - - - 0.00008391 54.0
YYD2_k127_3863460_0 Alpha-L-fucosidase K01206 - 3.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 517.0
YYD2_k127_3863460_1 Glyoxalase-like domain K08234 - - 0.00000000000000000000000000000000000000000000000000001792 192.0
YYD2_k127_3878664_0 Domain of unknown function (DUF2088) - - - 1.067e-229 724.0
YYD2_k127_3878664_1 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 427.0
YYD2_k127_3878664_2 Male sterility protein K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008339 430.0
YYD2_k127_3878664_3 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000004421 241.0
YYD2_k127_3878664_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000001159 143.0
YYD2_k127_3901648_0 benzoyl-CoA oxygenase K15512 - 1.14.13.208 4.971e-209 658.0
YYD2_k127_3901648_1 Enoyl-CoA hydratase/isomerase K15513 - 4.1.2.44 5.385e-208 659.0
YYD2_k127_3901648_10 Belongs to the UPF0232 family - - - 0.0000009965 56.0
YYD2_k127_3901648_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004626 539.0
YYD2_k127_3901648_3 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003604 363.0
YYD2_k127_3901648_4 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009907 270.0
YYD2_k127_3901648_5 PFAM short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003656 258.0
YYD2_k127_3901648_6 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000003013 220.0
YYD2_k127_3901648_7 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000005217 196.0
YYD2_k127_3901648_8 Bacterial regulatory proteins, tetR family K09017 - - 0.00000000000000000000000000000000000113 147.0
YYD2_k127_3901648_9 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000002926 81.0
YYD2_k127_390351_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 1.079e-260 816.0
YYD2_k127_390351_1 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 486.0
YYD2_k127_390351_2 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005229 430.0
YYD2_k127_390351_3 PFAM nitrogen-fixing NifU domain protein K04488 - - 0.00000000000000000000000000000001355 135.0
YYD2_k127_390351_4 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000001358 92.0
YYD2_k127_390351_5 von Willebrand factor type A domain K07114 - - 0.0000000008057 71.0
YYD2_k127_391253_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 491.0
YYD2_k127_391253_1 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K07713,K07714,K19641 - - 0.00000000000000000000000002586 113.0
YYD2_k127_3919107_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000054 240.0
YYD2_k127_3919107_1 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000001048 145.0
YYD2_k127_3919107_2 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000003598 102.0
YYD2_k127_3935495_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 353.0
YYD2_k127_3935495_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003095 291.0
YYD2_k127_3935495_2 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000006412 173.0
YYD2_k127_3956471_0 - K17285 - - 0.0 1259.0
YYD2_k127_3964422_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 310.0
YYD2_k127_3964422_1 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002791 268.0
YYD2_k127_3964422_2 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000004809 224.0
YYD2_k127_3964422_3 Protein of unknown function (DUF1697) - - - 0.0000000000000000000000000000000000000001463 159.0
YYD2_k127_3964422_4 - - - - 0.00000000000001273 76.0
YYD2_k127_3964422_5 - - - - 0.00001383 49.0
YYD2_k127_3977035_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 435.0
YYD2_k127_3977035_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000001037 246.0
YYD2_k127_3977035_2 Belongs to the peptidase M10A family K07763 GO:0001838,GO:0002009,GO:0002164,GO:0002165,GO:0002168,GO:0003007,GO:0003143,GO:0003144,GO:0005575,GO:0005623,GO:0006950,GO:0007155,GO:0007275,GO:0007399,GO:0007413,GO:0007417,GO:0007419,GO:0007424,GO:0007444,GO:0007503,GO:0007505,GO:0007507,GO:0007552,GO:0007560,GO:0007561,GO:0007591,GO:0008037,GO:0008038,GO:0008150,GO:0009611,GO:0009653,GO:0009790,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0016043,GO:0016331,GO:0022008,GO:0022411,GO:0022610,GO:0030030,GO:0030154,GO:0030182,GO:0030198,GO:0030425,GO:0031099,GO:0031175,GO:0032501,GO:0032502,GO:0034330,GO:0034769,GO:0035001,GO:0035050,GO:0035148,GO:0035150,GO:0035151,GO:0035152,GO:0035159,GO:0035239,GO:0035295,GO:0036477,GO:0040007,GO:0042060,GO:0042246,GO:0042303,GO:0042995,GO:0043005,GO:0043062,GO:0044463,GO:0044464,GO:0045216,GO:0048468,GO:0048513,GO:0048562,GO:0048563,GO:0048568,GO:0048569,GO:0048589,GO:0048598,GO:0048646,GO:0048666,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050896,GO:0060429,GO:0060541,GO:0060560,GO:0060562,GO:0060612,GO:0061448,GO:0061564,GO:0065007,GO:0065008,GO:0071711,GO:0071840,GO:0072175,GO:0072359,GO:0090066,GO:0097156,GO:0097447,GO:0097458,GO:0106030,GO:0120025,GO:0120036,GO:0120038 3.4.24.80 0.0003485 53.0
YYD2_k127_3982068_0 efflux transmembrane transporter activity - - - 1.137e-201 654.0
YYD2_k127_3982068_1 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006794 313.0
YYD2_k127_3992887_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.0 1429.0
YYD2_k127_3992887_1 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119 503.0
YYD2_k127_3992887_2 ATPase activity K13527 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001889 278.0
YYD2_k127_3992887_3 Methyltransferase FkbM domain - - - 0.0000000000000000000000000000000000000000002811 167.0
YYD2_k127_3992887_4 DNA mediated transformation - - - 0.00000000000000000000000000000000000000004135 168.0
YYD2_k127_3992887_5 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000007629 127.0
YYD2_k127_3992887_6 DNA mediated transformation K04096 - - 0.0000000000000000000000000007611 119.0
YYD2_k127_3992887_7 Putative auto-transporter adhesin, head GIN domain - - - 0.000000000000000002625 94.0
YYD2_k127_3992887_8 Protein of unknown function (DUF445) - - - 0.00000000000009194 84.0
YYD2_k127_3994792_0 ABC transporter, transmembrane K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 559.0
YYD2_k127_3994792_1 ABC transporter transmembrane region K18890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003645 551.0
YYD2_k127_3994792_2 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000008029 156.0
YYD2_k127_3994792_3 lytic transglycosylase activity K03194 - - 0.000000000001185 80.0
YYD2_k127_4019699_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 462.0
YYD2_k127_4019699_1 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000001243 219.0
YYD2_k127_4019699_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000003197 177.0
YYD2_k127_4019699_3 O-Antigen ligase K18814 - - 0.0000005004 62.0
YYD2_k127_4023505_0 Involved in the tonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000001019 209.0
YYD2_k127_4023505_1 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000006659 130.0
YYD2_k127_4023505_2 Involved in the tonB-independent uptake of proteins K03641 - - 0.000000000009607 72.0
YYD2_k127_4026725_0 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003852 578.0
YYD2_k127_4026725_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009058 520.0
YYD2_k127_4026725_2 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006879 450.0
YYD2_k127_4026725_3 Heparinase II/III-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004171 340.0
YYD2_k127_4036690_0 Peptidase M1, membrane alanine aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 335.0
YYD2_k127_4036690_1 Protein of unknown function (DUF1009) K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 294.0
YYD2_k127_4036690_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000004561 58.0
YYD2_k127_4044931_0 Oxidoreductase NAD-binding domain protein K02030,K03810 - - 1.521e-207 667.0
YYD2_k127_4044931_1 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003228 438.0
YYD2_k127_4044931_2 Glycosyl transferase family 2 K20534 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 391.0
YYD2_k127_4044931_3 Glycosyltransferase like family 2 K16870 - 2.4.1.289 0.0000000000000000000000000000000000000000000000000000000000002194 229.0
YYD2_k127_4044931_4 methyltransferase K05928 - 2.1.1.95 0.000000000000000000000000000000000000000000000000000001088 203.0
YYD2_k127_4044931_5 Psort location Cytoplasmic, score - - - 0.00000000000000008157 86.0
YYD2_k127_4044931_6 Methyltransferase domain - - - 0.0000000000001707 76.0
YYD2_k127_4044931_7 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000003995 69.0
YYD2_k127_4046661_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006781 552.0
YYD2_k127_4046661_1 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 360.0
YYD2_k127_4046661_2 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001704 273.0
YYD2_k127_4046661_3 Copper binding periplasmic protein CusF K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000006541 233.0
YYD2_k127_4046661_4 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000001479 110.0
YYD2_k127_4055895_0 cellulose binding - - - 0.0 1381.0
YYD2_k127_4055895_1 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000000000000000209 194.0
YYD2_k127_4076176_0 Amidohydrolase family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008128 544.0
YYD2_k127_4076176_1 amino acid K20265 GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0006873,GO:0006885,GO:0008150,GO:0008509,GO:0008514,GO:0009987,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0019725,GO:0022804,GO:0022857,GO:0030003,GO:0030004,GO:0030641,GO:0031224,GO:0031226,GO:0034220,GO:0042592,GO:0044425,GO:0044459,GO:0044464,GO:0045852,GO:0046942,GO:0046943,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0051453,GO:0051454,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:0098771,GO:1902475,GO:1903825,GO:1905039 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005433 340.0
YYD2_k127_4083232_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 5.224e-285 890.0
YYD2_k127_4083232_1 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000000005061 229.0
YYD2_k127_4083232_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000483 222.0
YYD2_k127_4083232_3 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000003031 60.0
YYD2_k127_410433_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 491.0
YYD2_k127_410433_1 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 451.0
YYD2_k127_410433_2 amino acid K03294,K20265 - - 0.000000000000000000000000000000000000003601 151.0
YYD2_k127_4106360_0 MviN-like protein K03980 - - 5.845e-198 632.0
YYD2_k127_4106360_1 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009334 489.0
YYD2_k127_4106360_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000123 187.0
YYD2_k127_4106360_3 PFAM peptidase S13 D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.000000000000000000000000000000000000000004975 171.0
YYD2_k127_4106360_4 Pilus assembly protein PilX K02673 - - 0.000000000000001188 89.0
YYD2_k127_4106360_6 Psort location Cytoplasmic, score 8.96 K03653 - 4.2.99.18 0.00005706 49.0
YYD2_k127_4106360_7 Pfam:N_methyl_2 - - - 0.0009113 50.0
YYD2_k127_4114063_0 chorismate binding enzyme K01665,K03342,K13950 - 2.6.1.85,4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000938 343.0
YYD2_k127_4114063_1 transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008438 296.0
YYD2_k127_4123073_0 carbamoyl transferase, NodU family K00612 - - 5.262e-197 631.0
YYD2_k127_4123073_1 ADP-glyceromanno-heptose 6-epimerase activity K01710,K08678 - 4.1.1.35,4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006696 495.0
YYD2_k127_4123073_10 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000000000000000007556 101.0
YYD2_k127_4123073_11 PFAM S23 ribosomal protein - - - 0.000000000000000000007518 97.0
YYD2_k127_4123073_12 Protein of unknown function (DUF465) - - - 0.0000001315 56.0
YYD2_k127_4123073_13 Tetratricopeptide repeat - - - 0.0001418 54.0
YYD2_k127_4123073_2 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 376.0
YYD2_k127_4123073_3 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004083 273.0
YYD2_k127_4123073_4 Glycosyl transferase family 4 K02851 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016043,GO:0016740,GO:0016772,GO:0016780,GO:0030145,GO:0034645,GO:0042546,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0045229,GO:0046872,GO:0046914,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:1901576 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000000002948 252.0
YYD2_k127_4123073_5 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000002342 213.0
YYD2_k127_4123073_6 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000003936 199.0
YYD2_k127_4123073_7 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000001536 158.0
YYD2_k127_4123073_8 Glycoprotease family K01409,K14742 - 2.3.1.234 0.0000000000000000000000000001083 124.0
YYD2_k127_4123073_9 O-Antigen ligase K02847 - - 0.00000000000000000000000001322 124.0
YYD2_k127_412383_0 teichoic acid transport K01990,K09689,K09691 - 3.6.3.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 388.0
YYD2_k127_412383_1 Transport permease protein K09690 - - 0.0000000000000000000000000002161 117.0
YYD2_k127_412383_2 - - - - 0.00000000000103 78.0
YYD2_k127_413658_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 354.0
YYD2_k127_413658_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000001241 75.0
YYD2_k127_413658_2 - - - - 0.0002437 51.0
YYD2_k127_415223_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 305.0
YYD2_k127_415223_1 PFAM cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000003184 258.0
YYD2_k127_415223_2 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.0000002604 52.0
YYD2_k127_415223_3 heme a metabolic process K02259,K03110 - - 0.000002566 51.0
YYD2_k127_416317_0 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 373.0
YYD2_k127_416317_1 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008323 368.0
YYD2_k127_416317_2 - - - - 0.00000000002138 66.0
YYD2_k127_416317_3 Belongs to the class-II aminoacyl-tRNA synthetase family K01880 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0016874,GO:0016875,GO:0046983,GO:0140098,GO:0140101 6.1.1.14 0.00000288 49.0
YYD2_k127_4172901_0 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 495.0
YYD2_k127_4172901_1 PFAM NHL repeat containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007997 415.0
YYD2_k127_4178705_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 444.0
YYD2_k127_4178705_1 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003524 315.0
YYD2_k127_4178705_2 riboflavin synthase, alpha K00793 GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000149 218.0
YYD2_k127_4178705_3 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.0000000000000000000000000000000000000000000000000000007584 200.0
YYD2_k127_4178705_4 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000001583 65.0
YYD2_k127_4203470_0 homoserine dehydrogenase K12524 - 1.1.1.3,2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008155 536.0
YYD2_k127_4214364_0 Integrin alpha (beta-propellor repeats). - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009207 514.0
YYD2_k127_4214364_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K02549 - 4.2.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 388.0
YYD2_k127_4214364_2 COG0666 FOG Ankyrin repeat K06867 - - 0.000000000000000000000000000000000000000000399 181.0
YYD2_k127_4214364_3 amine dehydrogenase activity K20276 - - 0.0000000000000000000000008871 123.0
YYD2_k127_4214364_4 Transcriptional regulator, RpiR family - - - 0.00000000000000000001671 102.0
YYD2_k127_4214364_5 Tetratricopeptide repeat - - - 0.00000000002231 78.0
YYD2_k127_4214364_6 COG0737 5'-nucleotidase 2',3'-cyclic phosphodiesterase and related esterases K01119,K11751 - 3.1.3.5,3.1.3.6,3.1.4.16,3.6.1.45 0.00006976 50.0
YYD2_k127_4231071_0 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 441.0
YYD2_k127_4231071_1 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 404.0
YYD2_k127_4231071_2 Oxidoreductase NAD-binding domain - - - 0.00000000000000000000000000001312 127.0
YYD2_k127_4231071_3 Prokaryotic N-terminal methylation motif - - - 0.000006739 58.0
YYD2_k127_4239294_0 gluconolactonase - - - 0.0000000000000000000000000000000000000000000002554 172.0
YYD2_k127_4239294_1 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) K10794 - 1.21.4.1 0.0000000000000000000000000001362 125.0
YYD2_k127_4239294_3 Domain of unknown function (DUF4149) - - - 0.000002973 55.0
YYD2_k127_425812_0 Elongation factor SelB, winged helix K03833 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000634 519.0
YYD2_k127_425812_1 glycosyl transferase group 1 K00754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000387 408.0
YYD2_k127_4263002_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 4.21e-223 712.0
YYD2_k127_426899_0 PA domain - - - 1.92e-243 765.0
YYD2_k127_426899_1 Penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009252 516.0
YYD2_k127_426899_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004996 302.0
YYD2_k127_426899_3 esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006725 278.0
YYD2_k127_426899_4 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000001005 271.0
YYD2_k127_426899_5 DinB superfamily - - - 0.0000000000000000000000000000000000000000000005663 174.0
YYD2_k127_426899_6 Putative restriction endonuclease - - - 0.000000000000000000000000000000000003784 145.0
YYD2_k127_426899_7 - - - - 0.00004519 48.0
YYD2_k127_4307074_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005021 413.0
YYD2_k127_4307074_1 4Fe-4S single cluster domain K06871 - - 0.00000000000000000000000000000000000000000000000000000000005463 224.0
YYD2_k127_4307074_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000001685 189.0
YYD2_k127_4317139_0 Predicted membrane protein (DUF2339) - - - 0.00000000000000000000000000000000000000000000000000000000000000000002259 256.0
YYD2_k127_4317139_1 membrane - - - 0.000000000000000000000000000000000002077 151.0
YYD2_k127_4317139_2 Protein of unknown function (DUF3772) K05802 - - 0.000000004585 63.0
YYD2_k127_4318782_0 cAMP biosynthetic process K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000001001 276.0
YYD2_k127_4318782_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000000000000000000001248 239.0
YYD2_k127_4318782_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 0.00000000000002057 73.0
YYD2_k127_4323815_0 peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 494.0
YYD2_k127_4323815_1 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008619 370.0
YYD2_k127_4323815_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000001318 161.0
YYD2_k127_4323815_3 IMP dehydrogenase activity - - - 0.000000000000000000000000452 109.0
YYD2_k127_4323815_4 methyltransferase - - - 0.0000000000008185 77.0
YYD2_k127_4324891_0 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 364.0
YYD2_k127_4324891_1 endonuclease I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 342.0
YYD2_k127_4324891_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000001056 53.0
YYD2_k127_4365468_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850,K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 427.0
YYD2_k127_4365468_1 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000001328 178.0
YYD2_k127_4365468_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000000191 182.0
YYD2_k127_4365468_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000003803 162.0
YYD2_k127_4365468_4 - - - - 0.00002545 50.0
YYD2_k127_4365468_5 McrBC 5-methylcytosine restriction system component K19147 - - 0.000194 46.0
YYD2_k127_4380932_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 612.0
YYD2_k127_4380932_1 Transporter-associated region K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 443.0
YYD2_k127_4380932_2 CarD-like/TRCF domain K07736 - - 0.0000000000000000000000000000000000002116 147.0
YYD2_k127_4381_0 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007551 490.0
YYD2_k127_4381_1 SPFH domain-Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802 443.0
YYD2_k127_4381_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006404 340.0
YYD2_k127_4381_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 306.0
YYD2_k127_4381_4 Glucose inhibited division protein A K21401 - 1.3.99.38 0.00000000000000000000000000000000001288 151.0
YYD2_k127_4381_5 Methyltransferase domain - - - 0.000000000000000000000000000000006205 137.0
YYD2_k127_4381_6 VanZ like family - - - 0.00000000000000000001111 97.0
YYD2_k127_4381_7 Domain of unknown function (DUF1768) - - - 0.00000000000000000003814 93.0
YYD2_k127_4385927_0 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003456 274.0
YYD2_k127_4386337_0 serine threonine protein kinase K12132 - 2.7.11.1 4.657e-215 701.0
YYD2_k127_4386337_1 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 338.0
YYD2_k127_4386337_2 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004273 321.0
YYD2_k127_4386337_3 IgA Peptidase M64 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000636 265.0
YYD2_k127_4386337_4 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000521 162.0
YYD2_k127_4387507_0 Actin K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005277 268.0
YYD2_k127_4387507_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000009692 256.0
YYD2_k127_4388693_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004653 474.0
YYD2_k127_4388693_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001595 254.0
YYD2_k127_4388693_2 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000000000007781 179.0
YYD2_k127_4388693_3 TPR repeat - - - 0.0000000000000004994 89.0
YYD2_k127_4388693_4 - - - - 0.00000001974 58.0
YYD2_k127_4388693_5 energy transducer activity K03832 - - 0.0000001353 63.0
YYD2_k127_4402481_0 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 2.425e-222 702.0
YYD2_k127_4402481_1 Domain of unknown function (DUF1731) K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 337.0
YYD2_k127_4402481_2 Involved in the tonB-independent uptake of proteins - - - 0.0000288 53.0
YYD2_k127_4410707_0 Serine aminopeptidase, S33 K00433 - 1.11.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006408 411.0
YYD2_k127_4410707_1 Chlorophyllase enzyme - - - 0.000000000000000000000000000000000000000000000000000000729 200.0
YYD2_k127_4410707_2 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000005378 176.0
YYD2_k127_4410707_3 - - - - 0.0000000000000000000000000000000000000000000198 167.0
YYD2_k127_4410707_4 - - - - 0.000000000000000000000000000000000000154 145.0
YYD2_k127_4410707_5 Smr domain - - - 0.000000000000000000000000000003703 122.0
YYD2_k127_4410707_6 Chlorophyllase - - - 0.0000000000000000000000000113 114.0
YYD2_k127_4411659_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 482.0
YYD2_k127_4411659_1 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 479.0
YYD2_k127_4413040_0 PFAM TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 571.0
YYD2_k127_4420683_0 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009986 505.0
YYD2_k127_4420683_1 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006871 331.0
YYD2_k127_4420683_2 Glycosyl transferase 4-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001154 279.0
YYD2_k127_4423258_0 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 355.0
YYD2_k127_4423258_1 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000009678 74.0
YYD2_k127_4426603_0 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003538 419.0
YYD2_k127_4426603_1 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 313.0
YYD2_k127_4426603_2 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 304.0
YYD2_k127_4426603_3 Cupin - - - 0.0000000000000000000000000000000000000000000000001096 179.0
YYD2_k127_4426603_4 PFAM MgtC SapB transporter K07507 - - 0.000000000000000000000000000000000000000000001133 170.0
YYD2_k127_4426603_5 Putative phosphatase (DUF442) - - - 0.000000000000009557 81.0
YYD2_k127_4426603_7 - - - - 0.000001903 55.0
YYD2_k127_4450464_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.501e-215 682.0
YYD2_k127_4450464_1 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000001867 115.0
YYD2_k127_4459697_0 Peptidase family S41 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 340.0
YYD2_k127_4459697_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001195 278.0
YYD2_k127_4478111_0 TIGRFAM amine acid ABC transporter, permease protein, 3-TM region, His Glu Gln Arg opine family K02029,K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004727 388.0
YYD2_k127_4478111_1 ABC transporter K02028,K02029,K09972,K10010 GO:0000099,GO:0000101,GO:0000166,GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008144,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015184,GO:0015318,GO:0015711,GO:0015804,GO:0015807,GO:0015811,GO:0015849,GO:0016020,GO:0017076,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034220,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072337,GO:0072348,GO:0072349,GO:0097159,GO:0097367,GO:0098656,GO:1901265,GO:1901363,GO:1901682,GO:1902475,GO:1903825,GO:1905039 3.6.3.21 0.00000000000000000000000000000000000000000000000000000000000000000003435 239.0
YYD2_k127_4493266_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 3.395e-233 731.0
YYD2_k127_4493266_1 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000006043 127.0
YYD2_k127_4493266_2 ATP synthase B/B' CF(0) K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0005736 49.0
YYD2_k127_4496607_0 surface antigen variable number - - - 0.00000000000000000000000000000000000000000000000000000000000004566 244.0
YYD2_k127_4496607_1 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000005181 188.0
YYD2_k127_4496607_2 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000000000000001918 197.0
YYD2_k127_4496607_3 peptidylprolyl isomerase K03771 - 5.2.1.8 0.0000001696 61.0
YYD2_k127_4514582_0 4Fe-4S dicluster domain K00184 - - 0.0 1034.0
YYD2_k127_4514582_1 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007547 291.0
YYD2_k127_4517658_0 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 500.0
YYD2_k127_4517658_1 - - - - 0.000000000000000000000000000000000000001559 153.0
YYD2_k127_4528988_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 518.0
YYD2_k127_4528988_1 DNA primase activity K02316 GO:0003674,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090304,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000001502 233.0
YYD2_k127_4528988_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000006866 106.0
YYD2_k127_4550594_0 TIGRFAM carbamoyl-phosphate synthase, large subunit K01955 - 6.3.5.5 0.0 1399.0
YYD2_k127_4550594_1 CoA binding domain K06929 - - 0.00000000000000000000000000000000000000000327 158.0
YYD2_k127_4552875_0 associated with various cellular activities K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002748 259.0
YYD2_k127_4552875_1 Domain of unknown function (DUF4350) - - - 0.0000000009967 69.0
YYD2_k127_4566693_0 Hydrophobe Amphiphile Efflux-1 (HAE1) Family K03296,K18138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004798 528.0
YYD2_k127_4566693_1 Biotin-lipoyl like K03585 - - 0.00000000000000000000000000000000000000003559 157.0
YYD2_k127_457309_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 GO:0003674,GO:0003824,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016491,GO:0016625,GO:0016903,GO:0043873,GO:0050896,GO:0055114 1.2.7.1 0.0 1196.0
YYD2_k127_4583152_0 Tricorn protease homolog K08676 - - 0.0 1225.0
YYD2_k127_4583152_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 3.128e-231 731.0
YYD2_k127_4583152_10 Transposase IS200 like - - - 0.0000000000000000000000000000001134 130.0
YYD2_k127_4583152_11 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000005328 108.0
YYD2_k127_4583152_12 peptidase activity - - - 0.000002018 52.0
YYD2_k127_4583152_2 PFAM Pyridoxal-dependent decarboxylase conserved domain K01580,K01593,K13745 - 4.1.1.105,4.1.1.15,4.1.1.28,4.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005122 587.0
YYD2_k127_4583152_3 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 517.0
YYD2_k127_4583152_4 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009972 382.0
YYD2_k127_4583152_5 4Fe-4S single cluster domain of Ferredoxin I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003095 334.0
YYD2_k127_4583152_6 3'(2'),5'-bisphosphate nucleotidase activity K01082 - 3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000007148 241.0
YYD2_k127_4583152_7 Transposase IS116/IS110/IS902 family - - - 0.0000000000000000000000000000000000000000000000000000000000001602 229.0
YYD2_k127_4583152_8 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.00000000000000000000000000000000000000000001757 162.0
YYD2_k127_4583152_9 Histidine kinase - - - 0.00000000000000000000000000000000276 147.0
YYD2_k127_4587255_0 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008362 274.0
YYD2_k127_4587758_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000007701 221.0
YYD2_k127_4587758_1 - - - - 0.00000000003068 74.0
YYD2_k127_4587758_2 Putative adhesin - - - 0.00003006 55.0
YYD2_k127_4590753_0 Amino acid permease - - - 4.146e-200 643.0
YYD2_k127_4590753_1 ferredoxin-NADP+ reductase activity K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 374.0
YYD2_k127_4590753_2 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007586 273.0
YYD2_k127_4590753_3 Osmosensitive K channel His kinase sensor K07646 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000005726 243.0
YYD2_k127_4590753_4 response regulator K07667 - - 0.000000000000000000000000000000000000000000000000000222 189.0
YYD2_k127_4590753_5 transcriptional - - - 0.0000000000000000001534 94.0
YYD2_k127_4600795_0 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007185 569.0
YYD2_k127_4600795_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000004494 169.0
YYD2_k127_4600795_2 - - - - 0.0000000000000000000001921 103.0
YYD2_k127_4600795_3 Isoprenylcysteine carboxyl methyltransferase (ICMT) family K21310 - 2.1.1.334 0.00000000000005198 73.0
YYD2_k127_4606949_0 Cytochrome c - - - 3.042e-316 1006.0
YYD2_k127_4606949_1 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 469.0
YYD2_k127_4606949_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007787 421.0
YYD2_k127_4606949_3 oxidoreductase activity, acting on diphenols and related substances as donors K02636,K03886 - 1.10.9.1 0.0000000000000000000000000000000000000000000000000000000000004025 217.0
YYD2_k127_4606949_4 Polysaccharide lyase family 4, domain II - - - 0.0000000000000000000000000000000000000000000000000000001056 204.0
YYD2_k127_4606949_5 methyltransferase K18846 - 2.1.1.180 0.0000000000000000000000009309 108.0
YYD2_k127_4606949_6 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000002546 72.0
YYD2_k127_4607992_0 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 - 1.1.1.25,4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008363 317.0
YYD2_k127_4607992_1 RNA 2'-O ribose methyltransferase substrate binding K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000003494 243.0
YYD2_k127_4607992_2 involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000001543 233.0
YYD2_k127_4608994_0 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 582.0
YYD2_k127_4608994_1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840,K03431,K15778 - 5.4.2.10,5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006153 389.0
YYD2_k127_4608994_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 310.0
YYD2_k127_4608994_3 Winged helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001115 292.0
YYD2_k127_4608994_4 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001227 269.0
YYD2_k127_4608994_5 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840,K03431,K15778 - 5.4.2.10,5.4.2.2,5.4.2.8 0.0000000000000003057 80.0
YYD2_k127_4609083_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 472.0
YYD2_k127_4609083_1 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 336.0
YYD2_k127_4609083_2 thymidine kinase activity K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.0000000000000000000000000000000000000000000000000000000000000001461 226.0
YYD2_k127_4609083_3 Protein of unknown function DUF84 - GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0017144,GO:0034641,GO:0042723,GO:0044237,GO:0044281,GO:0046483,GO:0071704,GO:0072527,GO:1901360,GO:1901564 - 0.00000000000000000000001151 111.0
YYD2_k127_4609295_0 Peptidase M16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003454 327.0
YYD2_k127_4609295_1 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001219 289.0
YYD2_k127_4621401_0 Heat shock 70 kDa protein K04043 - - 1.066e-230 728.0
YYD2_k127_4621401_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 416.0
YYD2_k127_4621401_2 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001018 291.0
YYD2_k127_4621401_3 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004069 260.0
YYD2_k127_4621401_4 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000002513 266.0
YYD2_k127_4621401_5 nucleotide metabolic process - - - 0.000000000000000000000000000000000000000000000000000006179 199.0
YYD2_k127_4621401_6 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.000000000000000000000000000000002854 137.0
YYD2_k127_4621401_8 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000006325 85.0
YYD2_k127_4626074_0 Esterase of the alpha-beta hydrolase superfamily K07001 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 4.14e-223 733.0
YYD2_k127_4626074_1 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 584.0
YYD2_k127_4626074_10 PFAM Haloacid dehalogenase domain protein hydrolase - - - 0.000000000000000000000000000003964 129.0
YYD2_k127_4626074_11 Biotin-requiring enzyme - - - 0.00000000000000000002663 97.0
YYD2_k127_4626074_12 - - - - 0.0000001315 56.0
YYD2_k127_4626074_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004262 541.0
YYD2_k127_4626074_3 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 508.0
YYD2_k127_4626074_4 Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 304.0
YYD2_k127_4626074_5 Belongs to the DapA family K01714,K22397 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005975,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016830,GO:0016832,GO:0019520,GO:0019752,GO:0032787,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0046176,GO:0046395,GO:0047440,GO:0071704,GO:0072329,GO:1901575 4.1.2.28,4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000002706 246.0
YYD2_k127_4626074_6 isomerase activity K06998 - 5.3.3.17 0.00000000000000000000000000000000000000000000000000000000000000001198 237.0
YYD2_k127_4626074_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000006849 227.0
YYD2_k127_4626074_8 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000002606 220.0
YYD2_k127_4626074_9 Lysin motif - - - 0.0000000000000000000000000000000000000004503 157.0
YYD2_k127_4639137_0 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 356.0
YYD2_k127_4639137_1 domain, Protein - - - 0.000009197 57.0
YYD2_k127_4640777_0 involved in signal transduction (via phosphorylation) involved in transcriptional regulatory mechanism and in the regulation of secondary metabolites catalytic activity ATP a protein ADP a phosphoprotein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004808 458.0
YYD2_k127_4640777_1 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009819 308.0
YYD2_k127_4640777_2 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009654 303.0
YYD2_k127_4640777_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002133 269.0
YYD2_k127_4640777_4 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000001071 158.0
YYD2_k127_4646596_0 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 371.0
YYD2_k127_4646596_1 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000001614 192.0
YYD2_k127_4646596_2 - - - - 0.0000000000000000000000000000000000000000001033 164.0
YYD2_k127_4646596_3 PFAM von Willebrand factor type A - - - 0.00000000000000000000000000000111 134.0
YYD2_k127_4647875_0 Vault protein inter-alpha-trypsin domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009558 383.0
YYD2_k127_465488_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007963 427.0
YYD2_k127_465488_1 ThiF family K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000006092 189.0
YYD2_k127_4661044_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 3.185e-206 662.0
YYD2_k127_4661044_1 Natural resistance-associated macrophage protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005723 332.0
YYD2_k127_4661044_2 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000001373 222.0
YYD2_k127_4661044_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000003486 157.0
YYD2_k127_4662349_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1923.0
YYD2_k127_4662349_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 296.0
YYD2_k127_4662349_2 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000001473 158.0
YYD2_k127_4662349_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000003323 156.0
YYD2_k127_4662349_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000003843 114.0
YYD2_k127_4670295_0 cellulose binding - - - 3.621e-223 695.0
YYD2_k127_4670295_1 Lactonase, 7-bladed beta-propeller K07404 - 3.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 442.0
YYD2_k127_4670295_2 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007854 428.0
YYD2_k127_4670295_3 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004246 341.0
YYD2_k127_4670295_4 PFAM YdjC family protein K03478 - 3.5.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008263 309.0
YYD2_k127_4670295_5 Activator of Hsp90 ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000306 249.0
YYD2_k127_4670295_6 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.000000000000000000000000000000000000002697 149.0
YYD2_k127_4670295_7 PFAM Glycosyl hydrolase family 3 C terminal domain - - - 0.000000000000001185 83.0
YYD2_k127_4670295_8 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000004082 73.0
YYD2_k127_4670295_9 YHS domain - - - 0.000000001723 62.0
YYD2_k127_4684359_0 von Willebrand factor, type A - - - 0.00000000000000000001158 107.0
YYD2_k127_4684359_1 von Willebrand factor type A domain K07114 - - 0.00000006776 64.0
YYD2_k127_468447_0 Sortilin, neurotensin receptor 3, - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007194 437.0
YYD2_k127_468447_1 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005811 423.0
YYD2_k127_468447_2 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000001077 207.0
YYD2_k127_468447_3 Amino acid permease K03294 - - 0.000000000000000000000000006602 113.0
YYD2_k127_4687319_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006589 561.0
YYD2_k127_4687319_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000006013 230.0
YYD2_k127_4690361_0 Arginase family K01476 - 3.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 332.0
YYD2_k127_4690361_1 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009596 276.0
YYD2_k127_4690361_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001219 273.0
YYD2_k127_4691185_0 DNA polymerase beta thumb K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 380.0
YYD2_k127_4691185_1 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000001721 132.0
YYD2_k127_4691185_2 Domain of unknown function (DUF4440) - - - 0.0000000000000002661 83.0
YYD2_k127_4691491_0 Amidohydrolase family K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009799 576.0
YYD2_k127_4691491_1 COGs COG4299 conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 406.0
YYD2_k127_4691491_2 Sortilin, neurotensin receptor 3, - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007728 314.0
YYD2_k127_4691491_3 Thiol-disulfide oxidoreductase DCC - - - 0.000000000000000000000000000000005247 132.0
YYD2_k127_4691491_4 GYD domain - - - 0.000000000000000000000000002316 115.0
YYD2_k127_469462_0 von Willebrand factor, type A - - - 0.000000000000000000000000000000004902 141.0
YYD2_k127_469462_1 transcriptional regulator K03655 - 3.6.4.12 0.00000000000000000000000000001465 134.0
YYD2_k127_4700516_0 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004022 420.0
YYD2_k127_4700516_1 Putative cyclase K07130 - 3.5.1.9 0.00000000000000000000000000000000000000000000000000624 188.0
YYD2_k127_4700516_2 Putative heavy-metal-binding - - - 0.00000000000000000000000000000000000000000026 162.0
YYD2_k127_4700516_3 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000000000000000006461 168.0
YYD2_k127_4700516_4 6-O-methylguanine DNA methyltransferase, DNA binding domain K07443 - - 0.000000000000000005592 89.0
YYD2_k127_4700516_5 Thioesterase superfamily K02614 - - 0.0000000000000005391 85.0
YYD2_k127_4700516_6 Histidine kinase - - - 0.00000000000251 79.0
YYD2_k127_4700643_0 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000009313 217.0
YYD2_k127_4700643_1 Ferredoxin K00529,K04755,K08952,K08953,K08954,K15765 GO:0005575,GO:0005622,GO:0005623,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044464,GO:0046858 1.18.1.3 0.00000000000000000000000000201 117.0
YYD2_k127_4702699_0 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 310.0
YYD2_k127_4702699_1 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000000000000000001067 223.0
YYD2_k127_4702699_2 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000000526 184.0
YYD2_k127_4702699_3 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000267 121.0
YYD2_k127_4702699_4 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000001796 104.0
YYD2_k127_4702699_5 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000002394 110.0
YYD2_k127_4702699_6 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000379 96.0
YYD2_k127_4702699_7 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.0005003 45.0
YYD2_k127_4703455_0 Forkhead associated domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 340.0
YYD2_k127_4703455_1 serine-type peptidase activity K01990,K08884,K12132,K18912 - 1.14.99.50,2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 324.0
YYD2_k127_4703455_2 Serine Threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000004542 211.0
YYD2_k127_4703455_3 serine threonine protein kinase - - - 0.00005781 55.0
YYD2_k127_4707819_0 Dienelactone hydrolase family - - - 2.082e-286 901.0
YYD2_k127_4707819_1 Amidase K01426 - 3.5.1.4 5.851e-207 656.0
YYD2_k127_4707819_2 Domain of unknown function (DUF4287) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000137 256.0
YYD2_k127_4707819_3 glyoxalase III activity - - - 0.000000000000000000000000000000000000000000000000000000000161 209.0
YYD2_k127_4707819_4 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000005228 144.0
YYD2_k127_4707819_5 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000001162 96.0
YYD2_k127_4707819_6 Belongs to the UPF0102 family K07460 - - 0.00000000000000214 82.0
YYD2_k127_4707819_7 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.00003593 53.0
YYD2_k127_4731164_0 CHAT domain - - - 1.093e-254 799.0
YYD2_k127_473291_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.1e-260 818.0
YYD2_k127_473291_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000005214 267.0
YYD2_k127_473291_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000002148 160.0
YYD2_k127_473291_3 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000006815 139.0
YYD2_k127_473291_4 - - - - 0.00000000000000000000000000000006983 134.0
YYD2_k127_473291_5 - - - - 0.0000000000002965 77.0
YYD2_k127_473291_6 Lipopolysaccharide-assembly - - - 0.0000000000009628 78.0
YYD2_k127_473291_7 Binds directly to 16S ribosomal RNA K02968 - - 0.000003036 50.0
YYD2_k127_4739074_0 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002443 321.0
YYD2_k127_4739074_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 304.0
YYD2_k127_4739074_2 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000001431 221.0
YYD2_k127_4739074_3 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000000000000000000000000000000000000000005704 198.0
YYD2_k127_4752437_0 TIGRFAM VWFA-related Acidobacterial domain K07114,K12511 - - 0.000000000004204 77.0
YYD2_k127_4752437_1 - K05826 - - 0.000000004176 60.0
YYD2_k127_4752437_2 Erythromycin esterase K06880 - - 0.0008778 50.0
YYD2_k127_4784374_0 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008549 461.0
YYD2_k127_4784374_1 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000003495 222.0
YYD2_k127_4809157_0 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000005049 240.0
YYD2_k127_4809157_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000003415 160.0
YYD2_k127_4809157_2 - - - - 0.000000000002801 74.0
YYD2_k127_4809157_3 ADP-glyceromanno-heptose 6-epimerase activity K00754,K08678,K13613 - 4.1.1.35 0.00000002064 58.0
YYD2_k127_4809157_4 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.00001145 50.0
YYD2_k127_4814720_0 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 411.0
YYD2_k127_4816100_0 beta-keto acid cleavage enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316 570.0
YYD2_k127_4816100_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007528 548.0
YYD2_k127_4816100_2 transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 406.0
YYD2_k127_4816100_3 NADPH quinone reductase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000001655 166.0
YYD2_k127_4816100_4 Bacterial DNA-binding protein K03530 - - 0.00000000000000000000001273 103.0
YYD2_k127_4816100_5 transcriptional K22295 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000002524 87.0
YYD2_k127_4816908_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 417.0
YYD2_k127_4816908_1 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008346 424.0
YYD2_k127_4816908_2 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 371.0
YYD2_k127_4830316_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 3.218e-276 861.0
YYD2_k127_4830316_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528,K16203 GO:0000270,GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0003977,GO:0005488,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006629,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009252,GO:0009273,GO:0009987,GO:0016051,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0019134,GO:0022610,GO:0030203,GO:0030260,GO:0033692,GO:0034637,GO:0034645,GO:0035635,GO:0040007,GO:0042546,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044406,GO:0044409,GO:0044419,GO:0044650,GO:0046872,GO:0051701,GO:0051704,GO:0051806,GO:0051828,GO:0070569,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008085 426.0
YYD2_k127_4830316_2 Required for morphogenesis under gluconeogenic growth conditions - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 315.0
YYD2_k127_4830316_3 Tetratricopeptide repeat - - - 0.000004229 57.0
YYD2_k127_4862394_0 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009247 370.0
YYD2_k127_4862394_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 316.0
YYD2_k127_4862394_2 lipid kinase activity - - - 0.0000000000000000000000000000000001519 145.0
YYD2_k127_4865700_0 Putative glutamine amidotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000967 440.0
YYD2_k127_4865700_1 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000000000000000000000000000002646 233.0
YYD2_k127_4865700_2 Peptidase C14 caspase catalytic subunit p20 - - - 0.0000000000000000000000000000000000000000000000004399 188.0
YYD2_k127_4868559_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 530.0
YYD2_k127_4868559_1 ankyrin repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 398.0
YYD2_k127_4868559_2 PFAM amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 373.0
YYD2_k127_4868559_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 311.0
YYD2_k127_4868559_4 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000000000001314 220.0
YYD2_k127_4868559_5 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000000000000000000000003425 185.0
YYD2_k127_4868559_6 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000000005626 166.0
YYD2_k127_4868559_7 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000001972 141.0
YYD2_k127_4868559_8 FAD dependent oxidoreductase - - - 0.0000000000000000000000000004455 116.0
YYD2_k127_4868559_9 protein conserved in bacteria K04750 - - 0.00000000000000000000000313 107.0
YYD2_k127_4872641_0 TIGRFAM iron-sulfur cluster binding protein K18929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 476.0
YYD2_k127_4872641_1 PFAM Alcohol dehydrogenase GroES-like domain K00008,K00060 - 1.1.1.103,1.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008111 461.0
YYD2_k127_4872641_2 Periplasmic binding proteins and sugar binding domain of LacI family K10439,K10552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 455.0
YYD2_k127_4872641_3 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008557 304.0
YYD2_k127_4872641_4 Cysteine-rich domain K18928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002509 284.0
YYD2_k127_4872641_5 Fumarylacetoacetate (FAA) hydrolase family K01826 - 5.3.3.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000001954 272.0
YYD2_k127_4872641_6 Amidohydrolase K07046 - - 0.00000000000000000000000000001942 119.0
YYD2_k127_4872641_7 Pfam:DUF162 K00782 - - 0.00000000000000000000002339 109.0
YYD2_k127_4882415_0 SpoVR like protein K06415 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006632 562.0
YYD2_k127_4882415_1 Belongs to the UPF0229 family K09786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 497.0
YYD2_k127_4882415_2 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 286.0
YYD2_k127_4882415_3 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003664 291.0
YYD2_k127_4882415_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000009675 233.0
YYD2_k127_4882415_5 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000000000000006678 149.0
YYD2_k127_4882415_6 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000001433 120.0
YYD2_k127_4882415_7 PrcB C-terminal - - - 0.00000002 62.0
YYD2_k127_4887089_0 PFAM Major Facilitator Superfamily K08191 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 436.0
YYD2_k127_4887089_1 D-galactarate dehydratase Altronate K01685,K01708 - 4.2.1.42,4.2.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006239 396.0
YYD2_k127_4887089_2 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008311 354.0
YYD2_k127_4887089_3 glucosamine-6-phosphate deaminase activity K01057,K02564 - 3.1.1.31,3.5.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 351.0
YYD2_k127_4894418_0 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000643 481.0
YYD2_k127_4908846_0 Radical SAM superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004874 256.0
YYD2_k127_4908846_1 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000544 175.0
YYD2_k127_4908846_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000001629 70.0
YYD2_k127_4908846_3 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.0000007855 53.0
YYD2_k127_4921283_0 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 300.0
YYD2_k127_4921283_1 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003895 278.0
YYD2_k127_4921283_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001403 249.0
YYD2_k127_4921283_3 Sulfate ABC transporter substrate-binding protein K02048 - - 0.00000000000000000000000000000000000000000000000000000000000000000005733 243.0
YYD2_k127_4921283_4 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000000000000000000008915 206.0
YYD2_k127_4921283_5 TIGRFAM sulfate ABC transporter, inner membrane subunit CysT K02046 - - 0.000000000000000000000000000000000000000000000000000215 196.0
YYD2_k127_4921283_6 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752,K13818 - 2.7.7.77 0.000000000000000000000000001354 119.0
YYD2_k127_4921283_7 Protein of unknown function (DUF2490) - - - 0.0000001398 61.0
YYD2_k127_4921283_8 of the alpha beta superfamily K06889 - - 0.000001132 60.0
YYD2_k127_4925932_0 Protein of unknown function (DUF3417) K00688 - 2.4.1.1 9.779e-242 766.0
YYD2_k127_4925932_1 Leucine-rich repeat K13730 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 389.0
YYD2_k127_4925932_2 Appr-1'-p processing enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000192 210.0
YYD2_k127_4925932_3 Serine Threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000003998 204.0
YYD2_k127_4925932_5 Protein of unknown function (DUF971) - - - 0.00000000000000000000000002172 111.0
YYD2_k127_4925932_6 - - - - 0.00000000000000000000001723 103.0
YYD2_k127_4925932_7 Protein of unknown function (DUF2847) - - - 0.000000000000000000002703 97.0
YYD2_k127_4925932_8 Domain of unknown function (DUF4384) - - - 0.00000000000009833 81.0
YYD2_k127_493138_0 PFAM peptidase S9 prolyl oligopeptidase active site domain protein K01322,K01354 - 3.4.21.26,3.4.21.83 3.566e-264 831.0
YYD2_k127_493138_1 ThiS family K21029,K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000832 122.0
YYD2_k127_493138_2 Belongs to the arginase family K01476 - 3.5.3.1 0.000000000000000000000000003286 122.0
YYD2_k127_493138_4 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.0000000001038 65.0
YYD2_k127_4936479_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000002668 202.0
YYD2_k127_4936479_2 - - - - 0.0007 43.0
YYD2_k127_4949206_0 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006117 322.0
YYD2_k127_4949206_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009353 316.0
YYD2_k127_4949206_2 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000007103 211.0
YYD2_k127_4949206_3 xanthine dehydrogenase activity K04108 - 1.3.7.9 0.000000000000000000000000000000000000000000006119 167.0
YYD2_k127_4960401_0 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 556.0
YYD2_k127_4960401_1 Type II secretion system (T2SS), protein F K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 416.0
YYD2_k127_4960401_2 sigma-54 factor interaction domain-containing protein K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 358.0
YYD2_k127_4960401_3 phosphorelay sensor kinase activity K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006193 306.0
YYD2_k127_4963261_0 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 402.0
YYD2_k127_4963261_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 411.0
YYD2_k127_4963261_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000001037 174.0
YYD2_k127_4963261_3 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000008221 157.0
YYD2_k127_4963261_4 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000004573 141.0
YYD2_k127_4963261_5 Glyoxalase-like domain - - - 0.00000000000000000000000001408 124.0
YYD2_k127_4963261_6 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.000000000000000000000000362 105.0
YYD2_k127_4978928_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895,K01907 - 6.2.1.1,6.2.1.16 2.703e-291 906.0
YYD2_k127_4978928_1 NADPH quinone reductase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007615 505.0
YYD2_k127_4978928_2 Taurine dioxygenase K03119 - 1.14.11.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 385.0
YYD2_k127_4985183_0 homoserine kinase activity K00823,K07250 - 2.6.1.19,2.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007242 561.0
YYD2_k127_4985183_1 homoserine kinase activity K00823,K07250 - 2.6.1.19,2.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 297.0
YYD2_k127_4985183_2 Beta-lactamase - - - 0.0000000000000000000000001023 113.0
YYD2_k127_4997754_0 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 336.0
YYD2_k127_4997754_1 COGs COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 342.0
YYD2_k127_4997754_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007757 320.0
YYD2_k127_4997754_3 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000002235 226.0
YYD2_k127_4998275_0 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005874 580.0
YYD2_k127_4998275_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003496 445.0
YYD2_k127_4998275_10 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000003405 113.0
YYD2_k127_4998275_11 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.000000000000000000000004324 106.0
YYD2_k127_4998275_12 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000008601 92.0
YYD2_k127_4998275_13 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000002302 60.0
YYD2_k127_4998275_14 PFAM Methyltransferase type 11 - - - 0.000715 50.0
YYD2_k127_4998275_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 413.0
YYD2_k127_4998275_3 PFAM Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004183 292.0
YYD2_k127_4998275_4 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000003304 239.0
YYD2_k127_4998275_5 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000004748 238.0
YYD2_k127_4998275_6 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.00000000000000000000000000000000000000008737 159.0
YYD2_k127_4998275_7 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.0000000000000000000000000000000001751 134.0
YYD2_k127_4998275_8 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000003743 136.0
YYD2_k127_4998275_9 PFAM Phosphoribosyltransferase - - - 0.0000000000000000000000000000000007771 140.0
YYD2_k127_499861_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006889 394.0
YYD2_k127_499861_2 heme oxygenase (decyclizing) activity - - - 0.0000000000000000000000000000000000000000003938 159.0
YYD2_k127_499861_3 Prolyl oligopeptidase - - - 0.000000000000000002865 89.0
YYD2_k127_499861_4 tRNA wobble adenosine to inosine editing - - - 0.00000000000000001329 87.0
YYD2_k127_4998701_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 424.0
YYD2_k127_4998701_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000104 235.0
YYD2_k127_4998701_2 ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000002157 200.0
YYD2_k127_4998701_3 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000001143 196.0
YYD2_k127_5000260_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 524.0
YYD2_k127_5000260_1 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 433.0
YYD2_k127_5000260_2 Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001548 284.0
YYD2_k127_5000260_3 DNA ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000007089 257.0
YYD2_k127_5000260_4 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000008231 152.0
YYD2_k127_5000260_5 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.000000000000000000000007245 107.0
YYD2_k127_5000260_6 YceI-like domain - - - 0.0000000000001253 79.0
YYD2_k127_5020970_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 449.0
YYD2_k127_5023466_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 9.262e-231 726.0
YYD2_k127_5023466_1 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 407.0
YYD2_k127_5023466_2 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 316.0
YYD2_k127_5023466_3 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000006147 268.0
YYD2_k127_5023466_4 GAF domain K08968 - 1.8.4.14 0.000000000000000000000000000000000000000000000000000001284 198.0
YYD2_k127_5023466_5 Peptidase M14, carboxypeptidase A - - - 0.0000000000000000007895 88.0
YYD2_k127_5026928_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006012 433.0
YYD2_k127_5026928_1 Beta-lactamase class C and other penicillin binding K01286 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001673 291.0
YYD2_k127_5026928_2 TPR repeat Sel1-like repeat Tetratricopeptide TPR_3 Tetratricopeptide TPR_2 - - - 0.0000003665 60.0
YYD2_k127_5028554_0 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003607 421.0
YYD2_k127_5028654_0 von Willebrand factor (vWF) type A domain K07114 - - 0.0000000000000000000001559 109.0
YYD2_k127_5028654_1 iron ion homeostasis - - - 0.00000000000000000003035 103.0
YYD2_k127_5028654_2 PFAM regulatory protein GntR HTH K07979 - - 0.000000000000000009336 88.0
YYD2_k127_5028654_3 oxidoreductase activity - - - 0.0000156 51.0
YYD2_k127_5031310_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003023 541.0
YYD2_k127_5031310_1 dna ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 435.0
YYD2_k127_5031310_10 - - - - 0.00000223 53.0
YYD2_k127_5031310_2 Ribonuclease HII K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 375.0
YYD2_k127_5031310_3 DNA ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000005812 208.0
YYD2_k127_5031310_4 Zinc carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000353 208.0
YYD2_k127_5031310_5 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000000000000000001285 203.0
YYD2_k127_5031310_6 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.0000000000000000000000000000000001996 136.0
YYD2_k127_5031310_7 von Willebrand factor, type A - - - 0.00000000000000000000000000002537 132.0
YYD2_k127_5031310_8 Response regulator, receiver K06147 - - 0.00000000000000000006446 95.0
YYD2_k127_5043783_0 Belongs to the GSP D family K02280 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002527 279.0
YYD2_k127_5043783_1 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.00000000000000000000000000000000000000000000005513 179.0
YYD2_k127_5045000_0 Tricorn protease C1 domain K08676 - - 1.521e-195 621.0
YYD2_k127_5062447_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 454.0
YYD2_k127_5062447_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000009707 258.0
YYD2_k127_5065391_0 Tfp pilus assembly protein FimV - - - 5.14e-196 616.0
YYD2_k127_5065391_1 DinB superfamily - - - 0.00000000000000000000000000000000001394 143.0
YYD2_k127_5065391_2 cellulase activity - - - 0.00000000001092 75.0
YYD2_k127_5067776_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007334 559.0
YYD2_k127_5072044_0 Aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005288 517.0
YYD2_k127_5072044_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 474.0
YYD2_k127_5072044_2 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 365.0
YYD2_k127_5072044_3 - - - - 0.00000000000000000000000000000000000000000001445 167.0
YYD2_k127_5072044_4 YCII-related domain - - - 0.0000000000000000000000000000000000000000002715 160.0
YYD2_k127_5072044_5 Thioesterase superfamily K07107 - - 0.000000002217 63.0
YYD2_k127_5085099_0 PFAM ROK family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 400.0
YYD2_k127_5085099_1 Belongs to the ompA family - - - 0.0000000000000002337 84.0
YYD2_k127_5088678_0 Fibronectin type III-like domain K05349 - 3.2.1.21 0.0 1028.0
YYD2_k127_5088678_1 Metallo-beta-lactamase superfamily - - - 0.000000000003941 66.0
YYD2_k127_5098192_0 radical SAM domain protein K04070 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000002432 233.0
YYD2_k127_5098192_1 radical SAM domain protein K04070 - 1.97.1.4 0.000000000000000000000000000001557 124.0
YYD2_k127_5098192_2 Protein of unknown function (DUF2721) - - - 0.000000000000000003878 89.0
YYD2_k127_5109681_0 Glycosyl hydrolase family 47 K01230 - 3.2.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005964 565.0
YYD2_k127_5109681_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 437.0
YYD2_k127_5109681_2 peptidoglycan biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000001343 243.0
YYD2_k127_5109681_3 PFAM Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000001095 225.0
YYD2_k127_5112406_0 transport - - - 3.068e-276 886.0
YYD2_k127_5130817_0 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008251 364.0
YYD2_k127_5130817_1 Tim44 K15539 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 319.0
YYD2_k127_5130817_2 Peptidase M16 inactive domain K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003145 285.0
YYD2_k127_5130817_3 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000007822 215.0
YYD2_k127_5130817_4 Trypsin-like peptidase domain - - - 0.000000000000000000000000000000000000000000000000000002694 205.0
YYD2_k127_5130817_5 peptidase M15B and M15C DD-carboxypeptidase VanY - - - 0.0000000000000000002621 100.0
YYD2_k127_5130817_6 Membrane K08988 - - 0.000000000000004405 83.0
YYD2_k127_5155814_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000445 349.0
YYD2_k127_5155814_1 - - - - 0.000000000000000000000000000000000000000000000000001486 192.0
YYD2_k127_5155814_2 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000006641 156.0
YYD2_k127_5155814_3 PFAM S23 ribosomal protein - - - 0.0000000000000000000006961 96.0
YYD2_k127_5155814_4 PFAM S23 ribosomal protein - - - 0.000008338 49.0
YYD2_k127_5155835_0 PFAM Amino acid permease K03294 - - 1.065e-210 670.0
YYD2_k127_5155835_1 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 610.0
YYD2_k127_5155835_2 protein conserved in cyanobacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004638 273.0
YYD2_k127_5155835_3 Universal stress protein - - - 0.0000000000000001424 91.0
YYD2_k127_5155835_4 PFAM Rhodanese domain protein - - - 0.00000000000006797 76.0
YYD2_k127_5155835_5 response to heat K03668,K09914 - - 0.000000000006042 76.0
YYD2_k127_5156883_0 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004433 478.0
YYD2_k127_5156883_1 - - - - 0.000000000000000000000000000001514 136.0
YYD2_k127_5188903_0 5'-nucleotidase, C-terminal domain K01119 - 3.1.3.6,3.1.4.16 3.073e-212 672.0
YYD2_k127_5188903_2 glycosyl transferase family - - - 0.0003491 53.0
YYD2_k127_5211704_0 NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 555.0
YYD2_k127_5211704_1 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001277 258.0
YYD2_k127_5211704_2 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K00340 - 1.6.5.3 0.0000000000000000000000000001221 119.0
YYD2_k127_5212093_0 ABC transporter K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008647 477.0
YYD2_k127_5212093_1 PFAM YicC-like family, N-terminal region - - - 0.000000000000000000000000000000000000000000000000000000002556 210.0
YYD2_k127_5212093_2 response regulator receiver K02483,K07658 - - 0.000000000000000000000000000000000000000000000000000000003389 207.0
YYD2_k127_5212093_3 chlorophyll binding - - - 0.0000000000000000000000000000000000000002208 168.0
YYD2_k127_5214483_0 phosphoesterase, PA-phosphatase related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006235 515.0
YYD2_k127_5214483_1 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 351.0
YYD2_k127_5214483_2 Membrane - - - 0.00000000000002973 83.0
YYD2_k127_5223963_0 Alginate lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 546.0
YYD2_k127_5223963_1 Alginate lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002046 271.0
YYD2_k127_5228664_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004596 424.0
YYD2_k127_5228664_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005431 381.0
YYD2_k127_5228664_2 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 354.0
YYD2_k127_5228664_3 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000002821 254.0
YYD2_k127_5228664_4 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000008775 196.0
YYD2_k127_5228664_5 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000003468 128.0
YYD2_k127_5243987_0 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 518.0
YYD2_k127_5243987_1 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000887 281.0
YYD2_k127_526529_0 Formamidopyrimidine-DNA glycosylase H2TH domain K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007312 389.0
YYD2_k127_526529_1 protein with SCP PR1 domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 350.0
YYD2_k127_526529_2 Periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000001559 152.0
YYD2_k127_5270909_0 DHH family K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003754 276.0
YYD2_k127_5270909_1 PFAM ATP corrinoid adenosyltransferase BtuR CobO CobP K19221 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000001993 195.0
YYD2_k127_5270909_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000001866 184.0
YYD2_k127_5270909_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000005158 88.0
YYD2_k127_5270909_4 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000001333 56.0
YYD2_k127_528502_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.041e-208 658.0
YYD2_k127_528502_1 TIGRFAM acetaldehyde dehydrogenase (acetylating) K00132 - 1.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 454.0
YYD2_k127_528502_2 BMC - - - 0.00000000000000000000000000000000000006317 146.0
YYD2_k127_528502_3 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.000000000000000000000000009307 115.0
YYD2_k127_528502_4 Belongs to the UPF0237 family K07166 - - 0.0000000000000000001714 94.0
YYD2_k127_528502_5 Helix-turn-helix domain - - - 0.000000000000006191 81.0
YYD2_k127_528975_0 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 592.0
YYD2_k127_528975_1 Pyridoxal-dependent decarboxylase conserved domain K01593,K01634 - 4.1.1.105,4.1.1.28,4.1.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 363.0
YYD2_k127_5314938_0 GTP-binding protein TypA K06207 - - 4.469e-258 808.0
YYD2_k127_5314938_1 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000005828 224.0
YYD2_k127_5314938_2 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000001669 175.0
YYD2_k127_5314938_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000537 168.0
YYD2_k127_5319251_0 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 400.0
YYD2_k127_5319251_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000001119 241.0
YYD2_k127_5319251_2 NfeD-like C-terminal, partner-binding - - - 0.00000000000005797 78.0
YYD2_k127_5333114_0 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004134 421.0
YYD2_k127_5333114_1 Permease, YjgP YjgQ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001125 284.0
YYD2_k127_5333114_2 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000714 175.0
YYD2_k127_5333114_3 Involved in DNA repair and RecF pathway recombination K03474,K03584 GO:0008150,GO:0009314,GO:0009628,GO:0050896 2.6.99.2 0.00000000000000000000000000000000000000008121 160.0
YYD2_k127_5333114_4 S-adenosyl-L-homocysteine hydrolase, NAD binding domain K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.00000000000000000000000000000000000000008359 152.0
YYD2_k127_5333114_5 - - - - 0.000000000000000002174 90.0
YYD2_k127_5333114_6 - - - - 0.0000299 48.0
YYD2_k127_5339811_0 asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 407.0
YYD2_k127_5339811_1 PFAM glycosyl transferase group 1 - - - 0.00000000009717 64.0
YYD2_k127_5343448_0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002661 508.0
YYD2_k127_5343448_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 464.0
YYD2_k127_5343448_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0000000000000000000000000000000000000002092 161.0
YYD2_k127_5343448_11 protocatechuate 3,4-dioxygenase activity K00449 - 1.13.11.3 0.0000000000000000000000000000000001053 143.0
YYD2_k127_5343448_12 Haem-binding domain - - - 0.0000000000000000000000000000000007734 137.0
YYD2_k127_5343448_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000000003372 128.0
YYD2_k127_5343448_14 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000001822 118.0
YYD2_k127_5343448_15 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000004539 78.0
YYD2_k127_5343448_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000004752 73.0
YYD2_k127_5343448_17 Putative porin - - - 0.00003169 57.0
YYD2_k127_5343448_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 319.0
YYD2_k127_5343448_3 Protein of unknown function (DUF1385) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003686 258.0
YYD2_k127_5343448_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000005663 243.0
YYD2_k127_5343448_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000038 231.0
YYD2_k127_5343448_6 DNA-templated transcription, initiation - - - 0.0000000000000000000000000000000000000000000000000000003942 209.0
YYD2_k127_5343448_7 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.00000000000000000000000000000000000000000000000000002039 197.0
YYD2_k127_5343448_8 PhoU domain K02039 - - 0.0000000000000000000000000000000000000000000000008053 183.0
YYD2_k127_5343448_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000001143 177.0
YYD2_k127_5356581_0 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008587 470.0
YYD2_k127_5356581_1 phosphohydrolases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 337.0
YYD2_k127_5356581_2 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000000000000000001785 210.0
YYD2_k127_5356581_3 Protein of unknown function (DUF4199) - - - 0.000000000000000000000000000000000000000000000000005946 188.0
YYD2_k127_5356581_4 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000008237 173.0
YYD2_k127_5356581_5 Protein of unknown function (DUF4199) - - - 0.000000000000000000000000000000000000000000005873 171.0
YYD2_k127_5356581_6 arogenate dehydratase activity K05359,K20102 GO:0003674,GO:0003824,GO:0004664,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006558,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009314,GO:0009416,GO:0009507,GO:0009536,GO:0009628,GO:0009637,GO:0009642,GO:0009645,GO:0009987,GO:0010244,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0019438,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0047769,GO:0050896,GO:0071704,GO:0080167,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 4.2.1.51,4.2.1.91 0.0000000000000000000000000000000000006542 147.0
YYD2_k127_5356581_7 Chorismate mutase type II K14170 - 4.2.1.51,5.4.99.5 0.0000000000004545 73.0
YYD2_k127_5356854_0 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000007346 255.0
YYD2_k127_5356854_1 Lamin Tail Domain K07004 - - 0.0000000000000000000000000000000000000000000008249 192.0
YYD2_k127_5356854_2 Extracellular nuclease K07004 - - 0.000000000000000000000000001945 131.0
YYD2_k127_5356854_3 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.0000001736 60.0
YYD2_k127_5368562_0 Peptidase S46 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 337.0
YYD2_k127_5368562_1 - - - - 0.00000000000000000000000000000000000969 140.0
YYD2_k127_5368942_0 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000008426 223.0
YYD2_k127_5368942_2 von Willebrand factor, type A - - - 0.000000002111 65.0
YYD2_k127_5368942_3 Protein conserved in bacteria - - - 0.0003238 51.0
YYD2_k127_5384094_0 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 310.0
YYD2_k127_5384094_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000125 187.0
YYD2_k127_5384094_2 PFAM OsmC family protein K04063 - - 0.00000000000000000000000000000000000000000000004137 173.0
YYD2_k127_5384094_3 META domain K03929 - - 0.00000000000000000000000001007 115.0
YYD2_k127_5384094_4 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000000000000000000002031 110.0
YYD2_k127_5384094_5 - - - - 0.00000000000000000000005964 104.0
YYD2_k127_5384094_6 Periplasmic or secreted lipoprotein - - - 0.00000000001409 64.0
YYD2_k127_5389560_0 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008729 558.0
YYD2_k127_5389560_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00008835 48.0
YYD2_k127_5389965_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K04105,K04110 - 6.2.1.25,6.2.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004818 514.0
YYD2_k127_5389965_1 Aminotransferase class-V K01556 - 3.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007284 460.0
YYD2_k127_5389965_2 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 411.0
YYD2_k127_5389965_3 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008442 383.0
YYD2_k127_5389965_4 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001053 297.0
YYD2_k127_5389965_5 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006084,GO:0006139,GO:0006163,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009117,GO:0009150,GO:0009259,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019442,GO:0019637,GO:0019693,GO:0019752,GO:0020037,GO:0022607,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043603,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051186,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0072521,GO:0097159,GO:1901135,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.00000000000000000000000000000000000000000000000000000000001373 216.0
YYD2_k127_5389965_6 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000001898 107.0
YYD2_k127_5389965_7 Thioesterase-like superfamily K01075 - 3.1.2.23 0.000000000000000000293 92.0
YYD2_k127_5394397_0 alpha-L-rhamnosidase - - - 2.71e-231 739.0
YYD2_k127_5394707_0 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 415.0
YYD2_k127_5394707_1 Large family of predicted nucleotide-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 355.0
YYD2_k127_5394707_2 PFAM Basic membrane lipoprotein K07335 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 332.0
YYD2_k127_5394707_3 ABC transporter K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004934 300.0
YYD2_k127_5394707_4 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.000000000000000000000000000000000000000000000001009 184.0
YYD2_k127_5394707_5 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) - - - 0.0000000000000000000000000000000000000000000004797 171.0
YYD2_k127_5396681_0 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000001525 165.0
YYD2_k127_5396681_1 PHP domain protein - - - 0.00000000000000000000000000000000003265 149.0
YYD2_k127_5396681_2 Stress responsive A/B Barrel Domain - - - 0.000000000000001537 80.0
YYD2_k127_5396681_3 Domain of unknown function (DU1801) - - - 0.0000004301 54.0
YYD2_k127_5396681_4 Forms a complex with YaeT, YfiO, and NlpB K17713 - - 0.0002518 51.0
YYD2_k127_539911_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000002622 240.0
YYD2_k127_539911_1 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000004049 199.0
YYD2_k127_539911_2 Cation transport regulator - - - 0.0000000000000000000000000000000000000000000004224 173.0
YYD2_k127_539911_3 PFAM von Willebrand factor type A - - - 0.00000000000000000000000000000000000000000001661 176.0
YYD2_k127_539911_4 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000005441 93.0
YYD2_k127_539911_5 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000001137 89.0
YYD2_k127_539911_6 CsbD-like - - - 0.0000000118 59.0
YYD2_k127_5400350_0 Belongs to the aldehyde dehydrogenase family K22187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000084 517.0
YYD2_k127_5400350_1 AMP-binding enzyme C-terminal domain K00666,K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008911 431.0
YYD2_k127_5400350_10 Protein of unknown function (DUF3108) - - - 0.0000000003704 72.0
YYD2_k127_5400350_2 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 415.0
YYD2_k127_5400350_3 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007569 334.0
YYD2_k127_5400350_4 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000001982 226.0
YYD2_k127_5400350_5 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000006167 224.0
YYD2_k127_5400350_7 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.00000000000000000000000000000000000131 142.0
YYD2_k127_5400350_8 high-affinity ferrous iron transmembrane transporter activity K07243 - - 0.0000000000000000000000000001894 126.0
YYD2_k127_5400350_9 Protein of unknown function (DUF3108) - - - 0.0000000001209 74.0
YYD2_k127_5400552_0 DNA methylase K07316 - 2.1.1.72 3.281e-270 857.0
YYD2_k127_5400552_1 DNA helicase - - - 0.00000000000000000000000000000000000000000000000000000000004504 213.0
YYD2_k127_5408665_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000717 376.0
YYD2_k127_5408665_1 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 350.0
YYD2_k127_5408665_2 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000818 108.0
YYD2_k127_5408665_3 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000001015 103.0
YYD2_k127_5411417_0 - - - - 0.00000000000000000000000000000000000000000000000000000002769 206.0
YYD2_k127_5411417_1 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000002302 144.0
YYD2_k127_5411417_2 peptidyl-tyrosine sulfation - - - 0.000004704 52.0
YYD2_k127_5411613_0 response regulator K02667 - - 0.00000000000000000000000000000000000000000000001439 180.0
YYD2_k127_5411613_1 Pfam:N_methyl_2 - - - 0.0000000000000000001845 94.0
YYD2_k127_5421488_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000006992 209.0
YYD2_k127_5421488_1 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000000000000006046 139.0
YYD2_k127_5421488_2 Transcriptional regulator - - - 0.000000000000000000000000002857 111.0
YYD2_k127_5422625_0 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000002672 173.0
YYD2_k127_5422625_1 Peroxisomal biogenesis factor 5 K13342,K20915 GO:0000038,GO:0000268,GO:0001764,GO:0002119,GO:0002164,GO:0003008,GO:0003674,GO:0005048,GO:0005052,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005782,GO:0005794,GO:0005829,GO:0006082,GO:0006464,GO:0006605,GO:0006612,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006807,GO:0006810,GO:0006886,GO:0006928,GO:0006996,GO:0007005,GO:0007006,GO:0007029,GO:0007031,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009791,GO:0009987,GO:0010256,GO:0012505,GO:0015031,GO:0015833,GO:0015919,GO:0016020,GO:0016042,GO:0016043,GO:0016054,GO:0016477,GO:0016558,GO:0016560,GO:0016561,GO:0016567,GO:0017038,GO:0019395,GO:0019538,GO:0019752,GO:0019899,GO:0021537,GO:0021543,GO:0021795,GO:0021885,GO:0021895,GO:0021953,GO:0021987,GO:0022008,GO:0022029,GO:0022607,GO:0030154,GO:0030182,GO:0030258,GO:0030900,GO:0031090,GO:0031267,GO:0031333,GO:0031903,GO:0031907,GO:0031974,GO:0032446,GO:0032459,GO:0032460,GO:0032462,GO:0032463,GO:0032501,GO:0032502,GO:0032787,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034440,GO:0034613,GO:0036211,GO:0040008,GO:0040011,GO:0040014,GO:0040018,GO:0042221,GO:0042277,GO:0042493,GO:0042579,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043412,GO:0043436,GO:0043574,GO:0043933,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0045046,GO:0045184,GO:0045927,GO:0046395,GO:0046907,GO:0047485,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048638,GO:0048639,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0050877,GO:0050896,GO:0050905,GO:0051020,GO:0051094,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051259,GO:0051262,GO:0051641,GO:0051649,GO:0051674,GO:0055085,GO:0055114,GO:0060322,GO:0061024,GO:0065002,GO:0065003,GO:0065007,GO:0070013,GO:0070647,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072329,GO:0072347,GO:0072594,GO:0072657,GO:0072662,GO:0072663,GO:0090150,GO:0098588,GO:0098805,GO:1901090,GO:1901091,GO:1901093,GO:1901094,GO:1901564,GO:1901575 - 0.0004457 52.0
YYD2_k127_5432154_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5,6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005827 463.0
YYD2_k127_5432936_0 Vault protein inter-alpha-trypsin domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 626.0
YYD2_k127_5432936_1 TIGRFAM TonB family protein K03832 - - 0.0000000000000000002375 100.0
YYD2_k127_5436388_0 Belongs to the BshC family K22136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003161 260.0
YYD2_k127_5436388_1 Belongs to the DapA family K01714,K22397 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005975,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016830,GO:0016832,GO:0019520,GO:0019752,GO:0032787,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0046176,GO:0046395,GO:0047440,GO:0071704,GO:0072329,GO:1901575 4.1.2.28,4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000001457 239.0
YYD2_k127_5437248_0 peptidase S9B dipeptidylpeptidase IV domain protein K01278 - 3.4.14.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 602.0
YYD2_k127_5437248_1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000001198 216.0
YYD2_k127_5437248_2 Protein of unknown function (DUF3309) - - - 0.0000000000000001336 79.0
YYD2_k127_5443042_0 cephalosporin hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002766 364.0
YYD2_k127_5443042_1 NAD dependent epimerase/dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000007032 242.0
YYD2_k127_5443042_2 Methyltransferase domain - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464 - 0.000000000000000000000000000001864 125.0
YYD2_k127_5443042_3 methyltransferase K16648 - - 0.00000000000000000000000000002082 129.0
YYD2_k127_546207_0 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K07291 - 2.7.8.34 0.000000000000000000000000000000000000000000000000000001726 199.0
YYD2_k127_546207_1 Protein of unknown function (DUF1572) - - - 0.000000000000000000000000000000000247 138.0
YYD2_k127_546207_2 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000002205 119.0
YYD2_k127_54621_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 628.0
YYD2_k127_54621_1 Hydrolase Family 16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009083 320.0
YYD2_k127_54621_2 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000001463 133.0
YYD2_k127_54621_3 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K05365 - 2.4.1.129,3.4.16.4 0.00000006702 61.0
YYD2_k127_5474812_0 Domain of unknown function (DUF4070) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006102 499.0
YYD2_k127_5474812_1 Polyphosphate kinase 2 (PPK2) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 469.0
YYD2_k127_5483974_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008246 285.0
YYD2_k127_5483974_1 Domain of unknown function (DUF4157) - - - 0.000000000000000000000000000000000000000000000000001793 194.0
YYD2_k127_5483974_2 - - - - 0.000000000000000000509 88.0
YYD2_k127_5492461_0 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 465.0
YYD2_k127_5492461_1 PEP-utilising enzyme, N-terminal K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 388.0
YYD2_k127_5492461_2 RNA polymerase sigma-54 factor K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 344.0
YYD2_k127_5492461_3 lipopolysaccharide-transporting ATPase activity K01990,K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009819 307.0
YYD2_k127_5492461_4 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001302 265.0
YYD2_k127_5492461_5 lipopolysaccharide transport K09774 - - 0.000000000000000000000000000000000000000159 172.0
YYD2_k127_5492461_6 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.000000000000000000000000000000001532 137.0
YYD2_k127_5492461_7 PTS system fructose IIA component K02793,K02794,K02821 - 2.7.1.191,2.7.1.194 0.00000000000000000000000000000003028 130.0
YYD2_k127_5492461_9 - - - - 0.0003206 49.0
YYD2_k127_549998_0 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 4.948e-290 912.0
YYD2_k127_5501040_0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000003456 161.0
YYD2_k127_5501040_1 Two component regulator propeller - - - 0.000000000000000000000001169 120.0
YYD2_k127_5501234_0 X-Pro dipeptidyl-peptidase (S15 family) K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007137 568.0
YYD2_k127_5501234_1 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000786 260.0
YYD2_k127_5501234_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000006812 214.0
YYD2_k127_5501234_3 - - - - 0.000000000000000000000000000000000000000000000000003595 193.0
YYD2_k127_5501234_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000001367 74.0
YYD2_k127_5504472_0 siderophore transport K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 604.0
YYD2_k127_5504472_1 COG0644 Dehydrogenases (flavoproteins) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006622 284.0
YYD2_k127_5504472_2 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000323 130.0
YYD2_k127_551965_0 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006284 352.0
YYD2_k127_551965_1 Belongs to the MlaE permease family K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000373 239.0
YYD2_k127_551965_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000001419 131.0
YYD2_k127_551965_3 ABC transporter, ATP-binding protein K02065 - - 0.0000000000000007782 83.0
YYD2_k127_5521033_0 - - - - 0.00000000000000000000000000000000000000000000000002031 187.0
YYD2_k127_5521033_1 Protein of unknown function (DUF1569) - - - 0.0000000000000000000000001293 111.0
YYD2_k127_5533374_0 transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005756 537.0
YYD2_k127_5533374_1 Protein conserved in bacteria - - - 0.0001293 53.0
YYD2_k127_5540216_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 587.0
YYD2_k127_5540216_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004626 397.0
YYD2_k127_5540216_2 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000003011 190.0
YYD2_k127_5540216_3 PFAM Single-stranded nucleic acid binding R3H K06346 - - 0.0000000000000000009169 92.0
YYD2_k127_5545621_0 beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009175 432.0
YYD2_k127_5545621_1 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005004 418.0
YYD2_k127_5545621_2 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 297.0
YYD2_k127_5545621_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000001842 273.0
YYD2_k127_5545621_4 CoA binding domain K06929 - - 0.00000000000000000000000000000000000000000000000000000000001593 209.0
YYD2_k127_5545621_5 Transposase IS200 like - - - 0.00000000000000000000000000000000000000000000000000000001209 205.0
YYD2_k127_5545621_6 - - - - 0.0000000000000000000001172 109.0
YYD2_k127_5545621_8 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00001996 51.0
YYD2_k127_5548486_0 TonB dependent receptor K16090 - - 9.113e-208 662.0
YYD2_k127_5548486_1 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001487 285.0
YYD2_k127_5548486_2 Prokaryotic dksA/traR C4-type zinc finger - - - 0.00000000003137 71.0
YYD2_k127_5552192_0 Catalyzes the conversion of 1-proline-5-carboxylate dehydrogenase to L-glutamate K00294 - 1.2.1.88 1.148e-211 669.0
YYD2_k127_5552192_1 PFAM FAD linked oxidase domain protein K00102 - 1.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000529 509.0
YYD2_k127_5552192_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 453.0
YYD2_k127_5552192_3 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000181 201.0
YYD2_k127_5555038_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 2.195e-290 914.0
YYD2_k127_5555038_1 PFAM Peptidase M19, renal dipeptidase K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003587 319.0
YYD2_k127_5555038_2 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000006296 246.0
YYD2_k127_5556872_0 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 613.0
YYD2_k127_5556872_1 Probable molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000001573 169.0
YYD2_k127_5556872_2 CoA binding domain K06929 - - 0.0000000000000000000000000000000003502 133.0
YYD2_k127_5556872_3 Domain of unknown function (DUF4178) - - - 0.000000000000000000000000000000006681 135.0
YYD2_k127_5556872_4 Domain of Unknown Function (DUF350) - - - 0.0000000000000001839 84.0
YYD2_k127_5562069_0 PFAM sigma-54 factor interaction domain-containing protein K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 446.0
YYD2_k127_5562069_1 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity K06188 GO:0003674,GO:0005215,GO:0005372,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006833,GO:0006884,GO:0006950,GO:0006970,GO:0008150,GO:0008361,GO:0009628,GO:0009987,GO:0009992,GO:0015250,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0042044,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0050896,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008616 357.0
YYD2_k127_5562069_2 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000008451 203.0
YYD2_k127_5562069_3 Domain of unknown function (DUF4136) - - - 0.000000000686 66.0
YYD2_k127_5568313_0 C-terminus of AA_permease K03294 - - 1.123e-227 715.0
YYD2_k127_5568313_1 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 377.0
YYD2_k127_5568313_2 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006204 346.0
YYD2_k127_5568313_3 Polysaccharide lyase family 4, domain II - - - 0.000000000000000000000000000000000000000000000007218 180.0
YYD2_k127_5568313_4 Acetyltransferase (GNAT) domain K03817 - - 0.000000000000000000013 92.0
YYD2_k127_5579352_0 Putative zinc binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 535.0
YYD2_k127_5579352_1 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004339 273.0
YYD2_k127_5579352_2 ADP-glyceromanno-heptose 6-epimerase activity K01709 - 4.2.1.45 0.00000000000000000008993 90.0
YYD2_k127_5597267_0 von Willebrand factor, type A - - - 0.00000000000000000000000001151 123.0
YYD2_k127_5597267_1 PFAM Adenylate cyclase K05873 - 4.6.1.1 0.00000000000000000005602 94.0
YYD2_k127_5597267_2 - - - - 0.00001301 54.0
YYD2_k127_5613108_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 5.369e-225 710.0
YYD2_k127_5613108_1 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006983 483.0
YYD2_k127_5613108_2 PFAM cobalamin B12-binding domain protein K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000009498 197.0
YYD2_k127_5613108_3 Belongs to the enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000001355 201.0
YYD2_k127_5613108_4 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000191 151.0
YYD2_k127_5613108_5 tetratricopeptide repeat - - - 0.0000953 54.0
YYD2_k127_5614264_0 regulation of DNA-templated transcription, elongation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 505.0
YYD2_k127_5614264_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 392.0
YYD2_k127_5614264_2 surface antigen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001089 289.0
YYD2_k127_5614264_3 Protein of unknown function (DUF4239) - - - 0.00006381 46.0
YYD2_k127_5621095_0 nucleotidyltransferase K07074 - - 0.000000000000000000000000001161 124.0
YYD2_k127_5621313_0 FtsX-like permease family - - - 1.211e-243 777.0
YYD2_k127_5621313_1 MacB-like periplasmic core domain - - - 5.981e-237 757.0
YYD2_k127_5621313_2 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002672 566.0
YYD2_k127_5621313_3 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000002812 143.0
YYD2_k127_5623820_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 299.0
YYD2_k127_5623820_1 Phage integrase, N-terminal SAM-like domain K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001 272.0
YYD2_k127_5626880_0 MatE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005058 584.0
YYD2_k127_5626880_1 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004112 286.0
YYD2_k127_5626880_2 DJ-1/PfpI family K05520 - 3.5.1.124 0.000000000000000000000000000000000000000000000000000000000000000000000000000009016 266.0
YYD2_k127_5634776_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 315.0
YYD2_k127_5634776_1 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002017 263.0
YYD2_k127_5634776_2 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000004755 156.0
YYD2_k127_5634776_3 protein conserved in bacteria K21470 - - 0.000000000000006716 87.0
YYD2_k127_5636649_0 Secretin and TonB N terminus short domain K02666 - - 0.0000000000000000000000000000000000000000000000000000000000009827 233.0
YYD2_k127_5636649_1 Staphylococcal nuclease homologues - - - 0.000000000000000000001543 107.0
YYD2_k127_5636649_2 Type IV pilus assembly protein PilM; K02662 - - 0.000000000000000000005159 96.0
YYD2_k127_5636649_3 Roadblock/LC7 domain - - - 0.000000000000001106 83.0
YYD2_k127_5636649_4 PFAM Pilus assembly protein PilO K02664 - - 0.000004329 57.0
YYD2_k127_5649126_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 3.13e-261 819.0
YYD2_k127_5649126_1 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 432.0
YYD2_k127_5649126_2 Deoxyhypusine synthase K00809 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008612,GO:0009058,GO:0009987,GO:0010467,GO:0016740,GO:0016765,GO:0018193,GO:0018205,GO:0019538,GO:0034038,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 291.0
YYD2_k127_5649141_0 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 479.0
YYD2_k127_5649141_1 Possible lysine decarboxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003308 274.0
YYD2_k127_5649141_2 Sodium calcium exchanger membrane K07300 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001013 259.0
YYD2_k127_5649141_3 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0000000000000000000000000000165 118.0
YYD2_k127_5662593_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 580.0
YYD2_k127_5662593_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 340.0
YYD2_k127_5662593_2 - - - - 0.000000000004889 73.0
YYD2_k127_5662593_3 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.0006089 44.0
YYD2_k127_566510_0 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 583.0
YYD2_k127_566510_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008712 314.0
YYD2_k127_566510_2 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000004524 132.0
YYD2_k127_566510_3 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000007288 122.0
YYD2_k127_566510_4 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000176 115.0
YYD2_k127_566510_5 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000003579 104.0
YYD2_k127_566510_6 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000001218 92.0
YYD2_k127_5670497_0 ThiS family K21029,K21147 - 2.7.7.80,2.8.1.11 4.771e-201 636.0
YYD2_k127_5670497_1 JAB/MPN domain - - - 0.00000000000000000000000000000000000000000008038 164.0
YYD2_k127_5670497_2 Cys/Met metabolism PLP-dependent enzyme K01739,K01758,K01760,K17217 - 2.5.1.48,4.4.1.1,4.4.1.2,4.4.1.8 0.000000000001039 68.0
YYD2_k127_5675789_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 344.0
YYD2_k127_5675789_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005812 315.0
YYD2_k127_5686680_0 Belongs to the glycosyl hydrolase 2 family - - - 3.561e-243 795.0
YYD2_k127_5686680_1 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002729 454.0
YYD2_k127_5686680_2 COG NOG06097 non supervised orthologous group - - - 0.000000000000000000000000000000000000000000001733 169.0
YYD2_k127_568685_0 Putative modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005988 542.0
YYD2_k127_5687805_0 Male sterility protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 590.0
YYD2_k127_5687805_1 ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005575 409.0
YYD2_k127_5687805_2 conserved protein (COG2071) K09166 - - 0.00000000000000000000000000000000000000000000000000000000000001193 223.0
YYD2_k127_5687805_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000007977 181.0
YYD2_k127_5687805_4 energy transducer activity K03832 - - 0.00001652 57.0
YYD2_k127_5689729_0 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 443.0
YYD2_k127_5689729_1 Aldehyde dehydrogenase family K22445 - 1.2.99.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000598 443.0
YYD2_k127_5689729_2 thiolester hydrolase activity K01179,K06889,K10773,K15853 - 3.2.1.4,4.2.99.18 0.0000000008536 63.0
YYD2_k127_5691209_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 569.0
YYD2_k127_5691209_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000001607 220.0
YYD2_k127_5691209_2 Disulphide isomerase - - - 0.00000000000000000000000000000000000000000000000000001093 192.0
YYD2_k127_5691209_3 - - - - 0.0000000000000000000000000000002201 128.0
YYD2_k127_5691209_4 PFAM Uncharacterised protein family UPF0079, ATPase K06925 - - 0.0000000000000000000000005259 111.0
YYD2_k127_5691209_5 Conserved hypothetical protein 95 - - - 0.000000000000000000000001739 106.0
YYD2_k127_5697367_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 4.642e-224 710.0
YYD2_k127_5697367_1 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 306.0
YYD2_k127_5697367_2 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000005527 260.0
YYD2_k127_5697367_3 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000001175 115.0
YYD2_k127_5697367_4 Tetratricopeptide repeat - - - 0.00003695 56.0
YYD2_k127_5706503_0 PspA/IM30 family K03969 - - 0.0000000000000000000000000000000000002065 151.0
YYD2_k127_5706503_1 - - - - 0.00000000000000004357 91.0
YYD2_k127_5706503_2 Tetratricopeptide repeat - - - 0.000000001101 68.0
YYD2_k127_5722484_0 TIGRFAM outer membrane protein assembly complex, YaeT protein K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 448.0
YYD2_k127_5723850_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008382 313.0
YYD2_k127_5723850_1 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000004049 190.0
YYD2_k127_572526_0 ATPase activity K13527 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006992 471.0
YYD2_k127_572526_1 WD40 repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000001046 254.0
YYD2_k127_5728777_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 486.0
YYD2_k127_5731479_0 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000004547 228.0
YYD2_k127_5731479_1 von Willebrand factor, type A - - - 0.00000000002616 72.0
YYD2_k127_5731479_2 zinc metalloprotease K11749 - - 0.0000000009285 67.0
YYD2_k127_5731479_3 - - - - 0.00004521 54.0
YYD2_k127_5735222_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004881 274.0
YYD2_k127_5735222_1 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000004986 186.0
YYD2_k127_5740041_0 ABC transporter K10441 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 580.0
YYD2_k127_5740041_1 Amidohydrolase family K05603 - 3.5.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 471.0
YYD2_k127_5740041_2 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003404 432.0
YYD2_k127_5740041_3 PRMT5 arginine-N-methyltransferase K11434 - 2.1.1.319 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004815 367.0
YYD2_k127_5740041_4 CobQ CobB MinD ParA nucleotide binding domain K08252,K13661,K16554,K16692 - 2.7.10.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007614 368.0
YYD2_k127_5740041_5 lipoprotein transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001032 274.0
YYD2_k127_5740041_6 Uncharacterised nucleotidyltransferase - - - 0.00000000000000000000000000000000000000000000000000000002538 213.0
YYD2_k127_5740041_7 ABC transporter K06147,K06148 - - 0.00000000000000000000000000000235 122.0
YYD2_k127_5740041_8 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.00000000000000003861 85.0
YYD2_k127_5741611_0 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 493.0
YYD2_k127_5741611_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 347.0
YYD2_k127_574349_0 2-epimerase K16213 - 5.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008966 462.0
YYD2_k127_574349_1 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008241 400.0
YYD2_k127_574349_2 peptidase dimerisation domain protein K01436 - - 0.000000000000000000000000000000000000000000000000000000001655 210.0
YYD2_k127_574354_0 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000003228 174.0
YYD2_k127_574354_1 PFAM Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000003664 162.0
YYD2_k127_574354_2 Glycosyl transferase, family 2 - - - 0.0000000000000000000001315 104.0
YYD2_k127_5753950_0 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 7.026e-263 820.0
YYD2_k127_5753950_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000004959 271.0
YYD2_k127_5753950_2 DNA-templated transcription, initiation K02405 - - 0.000000000000000000000000000000000000000000000000003881 187.0
YYD2_k127_5753950_3 ADP-ribosylglycohydrolase - - - 0.00000000000000000000000002979 111.0
YYD2_k127_5753950_4 deoxyhypusine monooxygenase activity - - - 0.000003317 57.0
YYD2_k127_5759738_0 Galactokinase galactose-binding signature K00849 - 2.7.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 401.0
YYD2_k127_5759738_1 Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005578 326.0
YYD2_k127_5759738_2 Aldose 1-epimerase K01785 - 5.1.3.3 0.00000000000000000000000000000000000000000000000000000246 195.0
YYD2_k127_5761269_0 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009211 385.0
YYD2_k127_5761269_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 297.0
YYD2_k127_5761269_2 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000001722 195.0
YYD2_k127_5770802_0 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008169 320.0
YYD2_k127_5770802_1 PFAM Forkhead-associated protein - - - 0.00000000000008161 78.0
YYD2_k127_5770802_2 Membrane - - - 0.000000003314 64.0
YYD2_k127_5778726_0 Belongs to the proline racemase family K01777 - 5.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004437 416.0
YYD2_k127_5778726_1 MOSC N-terminal beta barrel domain K07140 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001814 251.0
YYD2_k127_5778726_2 PFAM peptidase M15B and M15C DD-carboxypeptidase VanY endolysin - - - 0.00000000000000000000000000007824 127.0
YYD2_k127_5778726_3 - - - - 0.00009065 55.0
YYD2_k127_5780356_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006213 559.0
YYD2_k127_5780356_1 AMMECR1 K06990,K09141 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005673 336.0
YYD2_k127_5780356_2 TIGRFAM geranylgeranyl reductase - - - 0.0000000000000000000000000000000000000002778 163.0
YYD2_k127_5784000_0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006636 559.0
YYD2_k127_5784000_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006443 481.0
YYD2_k127_5784000_2 - K00262 - 1.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005454 452.0
YYD2_k127_5784000_3 PAS domain K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000408 344.0
YYD2_k127_5784000_4 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001726 276.0
YYD2_k127_5784000_5 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000000007588 239.0
YYD2_k127_5792544_0 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 559.0
YYD2_k127_5792544_1 Enoyl-CoA hydratase K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006188 280.0
YYD2_k127_579844_0 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000000000000000000000000001024 244.0
YYD2_k127_581701_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006937 536.0
YYD2_k127_581701_1 aminopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009417 453.0
YYD2_k127_581701_2 - - - - 0.0000000000000000000000000000000000000000006877 164.0
YYD2_k127_581701_3 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.0000000000000000000000000000000000781 135.0
YYD2_k127_581701_4 - - - - 0.000000000000000000000000000000388 125.0
YYD2_k127_5840552_0 PFAM GH3 auxin-responsive promoter - - - 0.0000000000002159 83.0
YYD2_k127_5840552_1 fatty acid desaturase - - - 0.000000000001718 77.0
YYD2_k127_5840552_2 Tetratricopeptide repeat - - - 0.0000002118 59.0
YYD2_k127_5840552_3 AI-2E family transporter - - - 0.0002845 49.0
YYD2_k127_5859799_0 Protease prsW family - - - 0.00000000000000000000000000000000000000000000000000000000000000000003564 241.0
YYD2_k127_5859799_1 tRNA 3'-trailer cleavage K00784,K01120 - 3.1.26.11,3.1.4.17 0.00000000000000000000000000000000000000000000000000002051 198.0
YYD2_k127_5860477_0 Amidohydrolase family K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007175 555.0
YYD2_k127_5860477_1 Putative serine dehydratase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 377.0
YYD2_k127_5860477_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 333.0
YYD2_k127_5860477_3 - - - - 0.0000000000000000000000000000000000000000006734 160.0
YYD2_k127_5860477_4 pyrroloquinoline quinone binding K01206,K01218 - 3.2.1.51,3.2.1.78 0.0000000000000000000000000000001365 130.0
YYD2_k127_5860477_5 protein trimerization - - - 0.000000000000000000000000001709 117.0
YYD2_k127_5860477_6 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000000000000000000000002771 109.0
YYD2_k127_5860477_7 Psort location Cytoplasmic, score - - - 0.000000000000008592 82.0
YYD2_k127_5860477_8 SpoVT / AbrB like domain - - - 0.00000002161 57.0
YYD2_k127_5860477_9 Helix-turn-helix domain - - - 0.000004332 56.0
YYD2_k127_5867735_0 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 333.0
YYD2_k127_5867735_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 317.0
YYD2_k127_5867735_2 OsmC-like protein K07397 - - 0.000000000000000000000000000000000000000002276 159.0
YYD2_k127_5867735_3 Lytic transglycosylase catalytic K08309 - - 0.000000000000000000000000001202 122.0
YYD2_k127_5867735_4 Domain of unknown function (DUF4081) K06976 - - 0.0000000000000000000000002032 117.0
YYD2_k127_5867735_5 - - - - 0.0000000000000000000000006145 118.0
YYD2_k127_5867735_6 - - - - 0.000000000000000000001255 106.0
YYD2_k127_5867735_7 Two component, sigma54 specific, transcriptional regulator, Fis family K07712,K07713,K07714,K10943 - - 0.0000000000000000002128 93.0
YYD2_k127_5867735_8 Outer membrane lipoprotein - - - 0.0000004605 59.0
YYD2_k127_5867735_9 - - - - 0.0000007159 60.0
YYD2_k127_5871967_0 O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 610.0
YYD2_k127_5871967_1 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000000006747 204.0
YYD2_k127_5871967_2 N-acetylmuramoyl-L-alanine amidase K01447 - 3.5.1.28 0.000000000000000000000000000000000003545 147.0
YYD2_k127_5871967_3 Putative esterase K07017 - - 0.0000000000000003374 85.0
YYD2_k127_5881698_0 Diacylglycerol kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001113 284.0
YYD2_k127_5881698_1 Sortilin, neurotensin receptor 3, - - - 0.000000000000000000000000000000000000000000000000003818 185.0
YYD2_k127_5881698_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000001053 122.0
YYD2_k127_5920797_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003266 449.0
YYD2_k127_5920797_1 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.0000000000000000000000000000000000161 145.0
YYD2_k127_5925613_0 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 480.0
YYD2_k127_5925613_1 TIGRFAM channel protein, hemolysin III family K11068 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001878 244.0
YYD2_k127_5925613_2 Belongs to the peptidase M48B family - - - 0.000000000000000000000000000000000000000000000000000000000000000001204 236.0
YYD2_k127_5925613_3 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000000006307 186.0
YYD2_k127_5925613_4 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000004958 55.0
YYD2_k127_5929803_0 PFAM Beta-eliminating lyase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 362.0
YYD2_k127_5929803_1 FGGY family of carbohydrate kinases, C-terminal domain K00851 - 2.7.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 370.0
YYD2_k127_5929803_2 Transcription factor zinc-finger - - - 0.0000000000000000000000000000000000000000000000000000000000844 212.0
YYD2_k127_593960_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009359 574.0
YYD2_k127_593960_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004801 510.0
YYD2_k127_593960_2 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 481.0
YYD2_k127_593960_3 Tricorn protease homolog - - - 0.00000001195 59.0
YYD2_k127_5944627_0 Prolyl oligopeptidase family - - - 4.278e-196 633.0
YYD2_k127_5944627_2 Forkhead associated domain - - - 0.00000000000000000000000000000000002656 153.0
YYD2_k127_5946464_0 enterobactin catabolic process - - - 3.339e-285 885.0
YYD2_k127_5946464_1 transmembrane transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 340.0
YYD2_k127_5946464_2 ADP-ribosylglycohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001694 240.0
YYD2_k127_5946464_3 - - - - 0.00000000000000000000000000000001307 136.0
YYD2_k127_5946464_6 Endonuclease/Exonuclease/phosphatase family - - - 0.00000003091 59.0
YYD2_k127_5946464_7 Pyridoxal-phosphate dependent enzyme - - - 0.0008002 42.0
YYD2_k127_5946799_0 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004947 536.0
YYD2_k127_5946799_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000012 295.0
YYD2_k127_595415_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 428.0
YYD2_k127_595415_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 385.0
YYD2_k127_595415_2 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 306.0
YYD2_k127_595415_3 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K22024 - 1.1.1.408,1.1.1.409 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 297.0
YYD2_k127_595415_4 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000001325 213.0
YYD2_k127_595415_5 response regulator - - - 0.0000000000000000000000000000000009371 145.0
YYD2_k127_595415_6 Hfq protein - - - 0.0000000000000000000000006636 108.0
YYD2_k127_595415_7 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.000000000000000001022 90.0
YYD2_k127_595415_8 7TM diverse intracellular signalling - - - 0.0000000000000001879 85.0
YYD2_k127_595415_9 Cell division protein FtsQ K03589 - - 0.000000000002043 78.0
YYD2_k127_595873_0 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000008348 241.0
YYD2_k127_595873_1 Thioredoxin-like K02199 - - 0.00000000000000000000003809 107.0
YYD2_k127_595873_2 Tetratricopeptide repeat - - - 0.000000000005814 78.0
YYD2_k127_5963033_0 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001346 279.0
YYD2_k127_5963033_1 Domain of Unknown function (DUF542) K07322 - - 0.000000000000000000000000000000000000000000000000000000000000000000006849 241.0
YYD2_k127_5963033_2 Cupin domain - - - 0.000000000000000000000000006053 113.0
YYD2_k127_5963033_3 Di-iron-containing protein involved in the repair of iron-sulfur clusters - - - 0.00000000001104 68.0
YYD2_k127_5967399_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 557.0
YYD2_k127_5967399_1 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 486.0
YYD2_k127_5967399_2 efflux transmembrane transporter activity K02004 - - 0.000000000000001696 78.0
YYD2_k127_5975989_0 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 302.0
YYD2_k127_5975989_1 glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 306.0
YYD2_k127_5975989_2 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000001394 62.0
YYD2_k127_5978413_0 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 478.0
YYD2_k127_5978413_1 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000581 469.0
YYD2_k127_5978413_2 double-stranded DNA 3'-5' exodeoxyribonuclease activity K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004461 294.0
YYD2_k127_5978413_3 PFAM peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004097 280.0
YYD2_k127_5978413_4 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000009518 248.0
YYD2_k127_5978413_5 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000002952 171.0
YYD2_k127_5978413_6 - - - - 0.000000000000000000000000000000000000003408 152.0
YYD2_k127_5978413_8 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000000000001207 109.0
YYD2_k127_5978413_9 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000005702 99.0
YYD2_k127_5982061_0 Belongs to the binding-protein-dependent transport system permease family K10559,K10561 - - 2.244e-264 829.0
YYD2_k127_5982061_1 Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system K10562 - 3.6.3.17 1.39e-198 632.0
YYD2_k127_5982061_2 Branched-chain amino acid transport system / permease component K10560 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 351.0
YYD2_k127_5989876_0 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 3.237e-194 623.0
YYD2_k127_5989876_1 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 538.0
YYD2_k127_5989876_2 Enoyl-CoA hydratase/isomerase K07516 - 1.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 490.0
YYD2_k127_5989876_3 Zn-dependent hydrolase, glyoxylase - - - 0.00000000000000000000000000000000000000000000000001336 192.0
YYD2_k127_5989876_4 - - - - 0.0000000000000000000000000000000002381 138.0
YYD2_k127_5989876_5 PDZ DHR GLGF domain protein - - - 0.0000000000000000000000000000000008205 145.0
YYD2_k127_5989876_6 C4-type zinc ribbon domain K07164 - - 0.00000000000000004794 90.0
YYD2_k127_5990271_0 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009399 473.0
YYD2_k127_5990271_1 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 441.0
YYD2_k127_5990271_2 RNA recognition motif - - - 0.0000000000000000000000000000000007627 136.0
YYD2_k127_5992596_0 HlyD family secretion protein K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 297.0
YYD2_k127_5992596_1 Predicted membrane protein (DUF2254) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001132 290.0
YYD2_k127_5992596_2 Protein of unknown function (DUF4239) - - - 0.00000000000000000000000000000000000000000001872 171.0
YYD2_k127_5992596_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000004441 119.0
YYD2_k127_5992596_4 Ion channel - - - 0.000000000000000000000002348 108.0
YYD2_k127_6010118_0 Phytanoyl-CoA dioxygenase (PhyH) K00477 - 1.14.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000002683 250.0
YYD2_k127_6010118_1 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000009177 169.0
YYD2_k127_6010118_2 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000009437 125.0
YYD2_k127_601653_0 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 4.009e-242 760.0
YYD2_k127_601653_1 PFAM Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000001654 137.0
YYD2_k127_601653_2 metallophosphoesterase K07098 - - 0.0000001131 57.0
YYD2_k127_6019838_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006629 339.0
YYD2_k127_6019838_1 phosphatidate phosphatase activity K19302 - 3.6.1.27 0.00000000000000000000000000000000000000002793 160.0
YYD2_k127_6019838_2 PhoQ Sensor K07640 - 2.7.13.3 0.00000000000000000000000000000000000000005032 156.0
YYD2_k127_6019838_3 ATPase family associated with various cellular activities (AAA) - - - 0.000003249 55.0
YYD2_k127_602880_0 Dipeptidyl peptidase IV (DPP IV) K01278 - 3.4.14.5 8.141e-274 860.0
YYD2_k127_6032815_0 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 395.0
YYD2_k127_6032815_1 cheY-homologous receiver domain - - - 0.000000000000000000000000001262 116.0
YYD2_k127_6032815_2 Acyltransferase family - - - 0.0000000002994 67.0
YYD2_k127_6032815_3 phosphorelay sensor kinase activity K02668 - 2.7.13.3 0.00000375 57.0
YYD2_k127_6041622_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 1.255e-305 947.0
YYD2_k127_6041622_1 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009457 293.0
YYD2_k127_6041622_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000003144 209.0
YYD2_k127_6041622_3 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000001038 139.0
YYD2_k127_6046805_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 7.692e-288 901.0
YYD2_k127_6046805_1 WD-40 repeat - - - 0.00001895 57.0
YYD2_k127_6054452_0 TIGRFAM rhamnulose-1-phosphate aldolase alcohol dehydrogenase - - - 1e-323 1005.0
YYD2_k127_6054452_1 sugar isomerase K01820 - 5.3.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 533.0
YYD2_k127_6082551_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1310.0
YYD2_k127_6082551_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000009709 246.0
YYD2_k127_6082551_2 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000001468 165.0
YYD2_k127_6082551_3 outer membrane efflux protein - - - 0.00000000002069 74.0
YYD2_k127_6086354_0 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004579 302.0
YYD2_k127_6086354_1 lysine biosynthetic process via aminoadipic acid - - - 0.0000000002001 66.0
YYD2_k127_6086354_2 lysine biosynthetic process via aminoadipic acid - - - 0.00002307 55.0
YYD2_k127_6093216_0 Type IV pilus assembly protein PilM; K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001148 249.0
YYD2_k127_6093216_1 O-acyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000001223 245.0
YYD2_k127_6093216_2 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000006742 179.0
YYD2_k127_6094201_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 358.0
YYD2_k127_6094201_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000644 239.0
YYD2_k127_6101233_0 Trypsin - - - 0.0000002405 54.0
YYD2_k127_6101233_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000001874 61.0
YYD2_k127_6102641_0 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 593.0
YYD2_k127_6102641_1 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007541 584.0
YYD2_k127_6102641_2 PFAM monooxygenase FAD-binding - - - 0.000000000000000000000000000000000000000000000000000000000008555 218.0
YYD2_k127_6102641_3 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000002162 101.0
YYD2_k127_6105413_0 Cytochrome C oxidase subunit II, periplasmic domain K00376 - 1.7.2.4 7.711e-235 732.0
YYD2_k127_6105413_1 Protein of unknown function (DUF1706) - - - 0.000000000000000000000000005814 118.0
YYD2_k127_6105413_2 lipoprotein involved in nitrous oxide reduction - - - 0.00000000194 61.0
YYD2_k127_6105937_0 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008388 397.0
YYD2_k127_6105937_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 316.0
YYD2_k127_6105937_2 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000005934 271.0
YYD2_k127_6105937_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000001899 248.0
YYD2_k127_6105937_4 Tetratricopeptide repeat - - - 0.000000008289 62.0
YYD2_k127_6105937_5 PFAM transposase IS200-family protein K07491 - - 0.000004233 58.0
YYD2_k127_6116382_0 PFAM NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008855 376.0
YYD2_k127_6116382_1 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000001728 147.0
YYD2_k127_6116382_2 chemotaxis K03408 - - 0.0000008977 53.0
YYD2_k127_6118192_0 ZIP Zinc transporter K07238,K11021,K16267 - - 0.00000000000000000000000000000000000000000000000000000000000002759 223.0
YYD2_k127_6118192_1 PFAM Class II aldolase adducin K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000000000007793 216.0
YYD2_k127_6118192_2 LemA family K03744 - - 0.0000000000000000000000000000000000000000000408 168.0
YYD2_k127_6118192_3 nucleotidyltransferase activity - - - 0.00000000000000000000000000000000001633 144.0
YYD2_k127_6118192_4 BMC K04027 - - 0.0000000000000000000000000000000001892 133.0
YYD2_k127_6118192_5 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028,K08697 - - 0.000000000000000000000000000006516 120.0
YYD2_k127_6118192_6 TPM domain K06872 - - 0.00000000000000000000000006859 118.0
YYD2_k127_6118192_7 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.000000000000000000000001108 106.0
YYD2_k127_6118192_8 Ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.00002691 50.0
YYD2_k127_6119321_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004137 594.0
YYD2_k127_612050_0 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006805 514.0
YYD2_k127_612050_1 Ion transport 2 domain protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000442 261.0
YYD2_k127_612050_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000001397 257.0
YYD2_k127_612050_3 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005655 250.0
YYD2_k127_612050_4 D,d-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000005376 225.0
YYD2_k127_612050_5 ADP-L-glycero-beta-D-manno-heptose biosynthetic process K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000003406 152.0
YYD2_k127_612050_6 Polysaccharide biosynthesis protein K12454 - 5.1.3.10 0.000000000000000000000000002964 121.0
YYD2_k127_6121875_0 glycoside hydrolase family 38 K01191 - 3.2.1.24 0.0 1441.0
YYD2_k127_6121875_1 PFAM Chlorite dismutase - - - 0.00000001131 56.0
YYD2_k127_6124810_0 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004898 448.0
YYD2_k127_6124810_1 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 364.0
YYD2_k127_6124810_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 320.0
YYD2_k127_6124810_3 PFAM phospholipase Carboxylesterase - - - 0.00000000000000000000000000000000000000000000000000009333 195.0
YYD2_k127_6124810_4 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.0000000000000000000000000000000000001118 143.0
YYD2_k127_6124810_5 PFAM sigma-54 factor interaction domain-containing protein K00575 - 2.1.1.80 0.0000000000000000000000000005915 117.0
YYD2_k127_6133734_0 - - - - 0.000000000000000000000000000000000000000005052 163.0
YYD2_k127_6133734_1 LGFP repeat - - - 0.0000000000003379 82.0
YYD2_k127_6133734_2 Glycoside hydrolase, family 19 K03791 - - 0.00000000002188 74.0
YYD2_k127_6144684_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 486.0
YYD2_k127_6144684_1 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006501 382.0
YYD2_k127_6144684_2 Beta-lactamase K17836 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000003852 250.0
YYD2_k127_6146064_0 DNA polymerase K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0 1041.0
YYD2_k127_6146064_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 385.0
YYD2_k127_6146064_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 374.0
YYD2_k127_6146064_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 338.0
YYD2_k127_6146064_4 Cobyrinic acid ac-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 293.0
YYD2_k127_6146064_5 Bifunctional nuclease K08999 - - 0.00000000000000000000000000000000000000000000000003472 183.0
YYD2_k127_6146064_6 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000001991 145.0
YYD2_k127_6146064_7 Belongs to the ParB family K03497 - - 0.000000000000000000000000001088 117.0
YYD2_k127_6155154_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 3.637e-298 936.0
YYD2_k127_6155154_1 Pectate lyase superfamily protein - - - 2.829e-194 620.0
YYD2_k127_6155154_2 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352 492.0
YYD2_k127_6155154_3 Transcriptional regulator, LysR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 329.0
YYD2_k127_6155154_4 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052,K21360 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006790,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009651,GO:0009941,GO:0009987,GO:0016143,GO:0016144,GO:0019748,GO:0019757,GO:0019758,GO:0019760,GO:0019761,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044249,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0050896,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006519 271.0
YYD2_k127_6155154_5 PFAM PemK-like protein K07171 - - 0.00000000000000000000000001606 113.0
YYD2_k127_6155154_6 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.0000000000000000000000002445 114.0
YYD2_k127_6155154_7 - - - - 0.00005869 48.0
YYD2_k127_6156223_0 Dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005639 405.0
YYD2_k127_6156223_1 Belongs to the CinA family K03742 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 399.0
YYD2_k127_6156223_2 Universal stress protein family - - - 0.000000000000000006496 89.0
YYD2_k127_6156223_3 TPM domain K06872 - - 0.00000000000004383 79.0
YYD2_k127_6156223_4 Peptidase family M28 - - - 0.0005913 44.0
YYD2_k127_6180302_0 ATPase associated with various cellular K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 377.0
YYD2_k127_6180302_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000007613 186.0
YYD2_k127_6180302_2 Protein of unknown function DUF58 - - - 0.000000000000000003491 98.0
YYD2_k127_6180302_3 Pfam:N_methyl_2 - - - 0.000000003131 64.0
YYD2_k127_6181508_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 457.0
YYD2_k127_6181508_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 289.0
YYD2_k127_6181508_2 RDD family - - - 0.0000000000000000000000000000000000000000000378 171.0
YYD2_k127_6186112_0 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009805 308.0
YYD2_k127_6186112_1 ABC transporter K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000008129 258.0
YYD2_k127_6186112_2 PFAM Branched-chain amino acid transport system permease component K02057 - - 0.00000000000000000000000000005784 119.0
YYD2_k127_6189089_0 - - - - 1.122e-242 764.0
YYD2_k127_6189557_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 1.368e-309 969.0
YYD2_k127_6189557_1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008689 415.0
YYD2_k127_6189557_2 FAD linked oxidases, C-terminal domain K00803 - 2.5.1.26 0.00000000001258 67.0
YYD2_k127_6198504_0 cellulose binding - - - 0.0 1069.0
YYD2_k127_6198504_1 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 502.0
YYD2_k127_6198504_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 466.0
YYD2_k127_6198504_3 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003886 373.0
YYD2_k127_6198504_4 CHASE3 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008894 293.0
YYD2_k127_6198504_5 Transcriptional regulator - - - 0.0000000000000000000000000000000002119 138.0
YYD2_k127_6198504_6 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000000000009546 132.0
YYD2_k127_6201756_0 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 353.0
YYD2_k127_6201756_1 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 313.0
YYD2_k127_6201756_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009116 325.0
YYD2_k127_6201756_3 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000001402 119.0
YYD2_k127_6201756_5 COG3678 P pilus assembly Cpx signaling pathway, periplasmic inhibitor zinc-resistance associated protein K06006 - - 0.0000743 53.0
YYD2_k127_6210258_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 474.0
YYD2_k127_6210258_1 Protein of unknown function (DUF1800) - - - 0.00000000000000000000000000000000000000000000000000000007616 207.0
YYD2_k127_6216916_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007058 417.0
YYD2_k127_6216916_1 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004727 311.0
YYD2_k127_6232930_0 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000482 522.0
YYD2_k127_6232930_1 protein kinase related protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 477.0
YYD2_k127_6232930_2 Iron-containing alcohol dehydrogenase K00001,K13954 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 395.0
YYD2_k127_6232930_3 - - - - 0.0000000000000000000000000000000000000000000000000003514 191.0
YYD2_k127_6232930_4 protein kinase related protein - - - 0.0000000000000000000000000000000000000000000002499 178.0
YYD2_k127_623577_0 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006823 358.0
YYD2_k127_623577_1 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000003169 241.0
YYD2_k127_623577_2 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000005434 137.0
YYD2_k127_623577_3 Carbohydrate family 9 binding domain-like - - - 0.0000000000000001707 84.0
YYD2_k127_6244849_0 ASPIC and UnbV - - - 2.274e-235 742.0
YYD2_k127_6244849_1 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000001696 222.0
YYD2_k127_6244849_2 - - - - 0.000000000000000000000000000000000009825 138.0
YYD2_k127_6244849_3 hydroperoxide reductase activity K01607 - 4.1.1.44 0.0000000000000000000000000000000001985 133.0
YYD2_k127_6265866_0 von Willebrand factor, type A K07114 - - 2.865e-220 703.0
YYD2_k127_6265866_1 - - - - 0.0000000000000000000000863 105.0
YYD2_k127_6268539_0 Belongs to the glycosyl hydrolase 43 family - - - 1.215e-211 670.0
YYD2_k127_6268539_1 Glycosyl Hydrolase Family 88 K15532 - 3.2.1.172 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 461.0
YYD2_k127_6268539_2 PFAM KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008912 268.0
YYD2_k127_6268539_3 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000005853 239.0
YYD2_k127_6268539_4 FCD K05799 - - 0.000000000000000000000000000000000000000000000000000000000000000004226 234.0
YYD2_k127_6268639_0 Belongs to the glycosyl hydrolase 31 family K01811 - 3.2.1.177 3.331e-308 954.0
YYD2_k127_6268639_1 Sulfatase-modifying factor enzyme 1 - - - 0.0000004761 55.0
YYD2_k127_6276229_0 5TM C-terminal transporter carbon starvation CstA K06200 - - 1.92e-219 696.0
YYD2_k127_6276229_1 Tricorn protease C1 domain K08676 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000232 252.0
YYD2_k127_6278036_0 Amidohydrolase family K01466 - 3.5.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006931 512.0
YYD2_k127_6278036_1 Belongs to the allantoicase family K01477 - 3.5.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003521 460.0
YYD2_k127_6278036_2 xanthine dehydrogenase activity K13479 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000004161 270.0
YYD2_k127_6278036_3 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000001156 209.0
YYD2_k127_6278036_4 ChrR Cupin-like domain - - - 0.00000000000000000000000000000000000000000005097 162.0
YYD2_k127_6278036_5 allantoin biosynthetic process K01477,K16840 - 3.5.3.4,4.1.1.97 0.0000000000000000000000000000000000000000001016 165.0
YYD2_k127_6278036_6 integral membrane protein - - - 0.00000000006993 72.0
YYD2_k127_6286781_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 7.466e-215 683.0
YYD2_k127_6286781_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004852 278.0
YYD2_k127_6286781_2 peptidyl-tyrosine sulfation K03217,K06872 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004208 271.0
YYD2_k127_6286781_3 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000008766 175.0
YYD2_k127_6286781_4 Lecithin:cholesterol acyltransferase - - - 0.0000000000000000002777 97.0
YYD2_k127_6315493_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.432e-253 790.0
YYD2_k127_6315493_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005201 516.0
YYD2_k127_6315493_2 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005499 362.0
YYD2_k127_6315493_3 - - - - 0.0000000000000000000000000000000000000000000000000000000008603 209.0
YYD2_k127_6315493_4 ECF sigma factor - - - 0.000000000000000000000000000000002594 136.0
YYD2_k127_6329103_0 PBS lyase HEAT-like repeat - - - 0.000000005762 69.0
YYD2_k127_6329103_1 deoxyhypusine monooxygenase activity - - - 0.000003797 59.0
YYD2_k127_6345743_0 GrpB protein - - - 0.00000000000000000000006869 104.0
YYD2_k127_6345743_1 GrpB protein - - - 0.0000003612 55.0
YYD2_k127_6345743_2 Participates in transcription elongation, termination and antitermination K02601 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016020,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0030312,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043244,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.0007178 45.0
YYD2_k127_6364518_0 Radical SAM - - - 1.025e-220 702.0
YYD2_k127_6364518_1 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000001046 209.0
YYD2_k127_6365117_0 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005337 609.0
YYD2_k127_6365117_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 533.0
YYD2_k127_6365117_2 cAMP biosynthetic process K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 435.0
YYD2_k127_6365117_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002824 277.0
YYD2_k127_6365117_4 gluconolactonase activity K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000137 270.0
YYD2_k127_6365117_5 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001892 243.0
YYD2_k127_6365117_6 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000003319 176.0
YYD2_k127_6377662_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 9.853e-219 686.0
YYD2_k127_6377662_1 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000004113 259.0
YYD2_k127_6377662_2 Domain of unknown function (DUF3391) - - - 0.0000000000000523 77.0
YYD2_k127_6383026_0 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 345.0
YYD2_k127_6383026_1 phosphoserine phosphatase activity K07315,K16928 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000002097 226.0
YYD2_k127_6383026_2 helix-turn-helix- domain containing protein, AraC type K13653 - - 0.000000000000000000000000000000000000000000007684 167.0
YYD2_k127_6383026_3 Histidine kinase - - - 0.0000000000000000000000001509 107.0
YYD2_k127_6383614_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003949 493.0
YYD2_k127_6383614_1 reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 291.0
YYD2_k127_6383614_2 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000003159 222.0
YYD2_k127_6383614_3 Aminoglycoside 3-N-acetyltransferase - - - 0.0000000000000000000000000005143 124.0
YYD2_k127_6383614_4 - - - - 0.000000000414 61.0
YYD2_k127_6388597_0 Radical SAM - - - 0.0 1008.0
YYD2_k127_6394017_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 2.844e-198 634.0
YYD2_k127_6394017_1 PFAM tRNA synthetase, class II (G, H, P and S) K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007091 371.0
YYD2_k127_6394017_2 Protein of unknown function (DUF1572) - - - 0.000000000000000000000000000000000000000000000000000000000000000001477 232.0
YYD2_k127_6394017_3 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000139 194.0
YYD2_k127_6394017_4 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000003759 164.0
YYD2_k127_6394017_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000267 121.0
YYD2_k127_6394017_6 Periplasmic or secreted lipoprotein - - - 0.0000001075 65.0
YYD2_k127_6394017_7 JAB/MPN domain K21140 - 3.13.1.6 0.0007178 45.0
YYD2_k127_6403792_0 PFAM Type II secretion system protein E K02652 - - 2.29e-218 691.0
YYD2_k127_6403792_1 PFAM Type II secretion system F domain K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004759 276.0
YYD2_k127_6403792_2 Protein of unknown function (DUF1003) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001323 262.0
YYD2_k127_6403792_3 von Willebrand factor (vWF) type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000002794 244.0
YYD2_k127_6403792_4 von Willebrand factor, type A - - - 0.000000000000000000000000000000000000000000000005744 188.0
YYD2_k127_6403792_5 Low affinity iron permease - - - 0.00000000000000000000000000000000000000000000003244 174.0
YYD2_k127_6403792_6 Belongs to the GSP D family K02453 - - 0.000000000000000000000000000000000000000005739 178.0
YYD2_k127_6403792_7 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000003375 122.0
YYD2_k127_6403792_8 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000001829 123.0
YYD2_k127_6403792_9 Pilus assembly protein K02461,K02662,K02663,K12288 GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.0001558 53.0
YYD2_k127_6423121_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006198 456.0
YYD2_k127_6423121_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000000000000000000000000000001413 220.0
YYD2_k127_6423121_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000002697 169.0
YYD2_k127_649170_0 Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004773 275.0
YYD2_k127_649170_1 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000000000000000000000000001142 200.0
YYD2_k127_660871_0 PQQ-like domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000002386 230.0
YYD2_k127_660871_1 Biotin-lipoyl like K02005 - - 0.00000000000000000000000000000000000000000000000000000003066 215.0
YYD2_k127_660871_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000002859 186.0
YYD2_k127_660871_3 PFAM Forkhead-associated protein - - - 0.000000000000000000000001252 110.0
YYD2_k127_674045_0 serine threonine protein kinase K12132 - 2.7.11.1 1.547e-199 653.0
YYD2_k127_674045_1 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 306.0
YYD2_k127_674045_2 BON domain K04065 - - 0.0004634 50.0
YYD2_k127_67648_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 1.716e-199 643.0
YYD2_k127_67648_1 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000009871 235.0
YYD2_k127_67648_2 Isochorismatase family - - - 0.0000000000000000000000000000000000000000001906 164.0
YYD2_k127_676510_0 Peptidase M56 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003361 474.0
YYD2_k127_676510_1 ATP dependent DNA ligase C terminal region K10747 GO:0000287,GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0030312,GO:0033554,GO:0034641,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0140097,GO:1901360,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004362 406.0
YYD2_k127_676510_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0040007,GO:0042886,GO:0042887,GO:0043953,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.000000000000000000000000000000000000001486 160.0
YYD2_k127_676510_3 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid - - - 0.000000000000000001343 87.0
YYD2_k127_676510_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117 - - 0.000000001185 64.0
YYD2_k127_685774_0 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.000000000000000000000000000000000000000000000133 172.0
YYD2_k127_685774_1 Histidine kinase - - - 0.0000000000000000000000002337 111.0
YYD2_k127_685774_2 ABC-type multidrug transport system ATPase component - - - 0.0000984 52.0
YYD2_k127_688177_0 Belongs to the glycosyl hydrolase 57 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006189 312.0
YYD2_k127_688177_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001239 241.0
YYD2_k127_688177_2 transcriptional regulator sugar kinase K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000001441 232.0
YYD2_k127_706478_0 Peptidase family M49 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 499.0
YYD2_k127_706478_1 Abhydrolase domain containing 18 - - - 0.000000000000000000000000000000000000006765 150.0
YYD2_k127_710501_0 PAS domain K00575,K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 363.0
YYD2_k127_710501_1 protein-glutamate methylesterase K00575,K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007065 335.0
YYD2_k127_714641_0 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000121 277.0
YYD2_k127_714641_1 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004725 257.0
YYD2_k127_714641_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000005511 233.0
YYD2_k127_714641_3 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000000002632 209.0
YYD2_k127_714997_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 401.0
YYD2_k127_714997_1 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 335.0
YYD2_k127_722914_0 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 535.0
YYD2_k127_722914_1 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 392.0
YYD2_k127_722914_2 - - - - 0.00000000000000000000000000000000000001096 159.0
YYD2_k127_722914_3 response to oxidative stress - - - 0.00000000000000000000000000000000000429 144.0
YYD2_k127_722914_4 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000121 61.0
YYD2_k127_724250_0 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000001327 207.0
YYD2_k127_724250_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000895 115.0
YYD2_k127_724250_2 AMP binding - - - 0.00000000000000009104 91.0
YYD2_k127_724250_3 cog cog1924 - - - 0.0000000000001284 74.0
YYD2_k127_724250_4 Di-iron-containing protein involved in the repair of iron-sulfur clusters - - - 0.00000000008665 66.0
YYD2_k127_724250_5 Universal stress protein - - - 0.0000000002122 72.0
YYD2_k127_729847_0 protease with the C-terminal PDZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009175 332.0
YYD2_k127_729847_1 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001991 282.0
YYD2_k127_729847_2 lipid kinase, YegS Rv2252 BmrU family - - - 0.0000000000000000000000000000000000000000000002324 177.0
YYD2_k127_730064_0 COG3119 Arylsulfatase A and related enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 529.0
YYD2_k127_730064_1 crp fnr family K01420 - - 0.00000000000000000000000000000000000000000000000000000000405 206.0
YYD2_k127_730064_2 PKD domain - - - 0.0000000000000000000000000000000000000000000000000000001209 217.0
YYD2_k127_730064_3 Pkd domain containing protein - - - 0.00000000000382 79.0
YYD2_k127_735143_0 dna ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 429.0
YYD2_k127_735143_1 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 329.0
YYD2_k127_735143_2 ATP dependent DNA ligase C terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006473 287.0
YYD2_k127_735143_3 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000008784 233.0
YYD2_k127_739787_0 Bacterial protein of unknown function (DUF885) - - - 5.194e-204 656.0
YYD2_k127_739787_1 PFAM Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000002087 142.0
YYD2_k127_766416_0 von Willebrand factor, type A - - - 0.0000000000000000002194 102.0
YYD2_k127_77145_0 MatE - - - 2.207e-218 688.0
YYD2_k127_77145_1 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 361.0
YYD2_k127_77145_2 PFAM DGPFAETKE family protein - - - 0.0000000000000000000000000000000000000000000000000000000002093 206.0
YYD2_k127_77145_3 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000669 206.0
YYD2_k127_77145_4 - - - - 0.0000000000000000000000000000000000000000004296 165.0
YYD2_k127_772146_0 Belongs to the MIP aquaporin (TC 1.A.8) family - - - 0.000000000000000000000000000000000000000000000000003342 185.0
YYD2_k127_772146_1 low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000106 166.0
YYD2_k127_772146_2 Protein of unknown function (DUF3224) - - - 0.000000000000000000000000000000000000000004081 160.0
YYD2_k127_772146_3 SnoaL-like domain K06893 - - 0.00000000000000000000000000000000003362 138.0
YYD2_k127_772146_4 chlorophyll binding - - - 0.000000001272 67.0
YYD2_k127_772146_5 Tetratricopeptide repeat - - - 0.000004121 55.0
YYD2_k127_791866_0 PFAM TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 571.0
YYD2_k127_791866_1 Transmembrane and TPR repeat-containing protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0008150,GO:0012505,GO:0016020,GO:0031984,GO:0042175,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0048878,GO:0050801,GO:0055065,GO:0055074,GO:0055080,GO:0065007,GO:0065008,GO:0072507,GO:0098771,GO:0098827 - 0.000001268 60.0
YYD2_k127_791866_2 oxidoreductase activity - - - 0.0000058 54.0
YYD2_k127_804159_0 enzyme involved in inositol metabolism K03337 - 5.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 357.0
YYD2_k127_804159_1 PFAM Short-chain dehydrogenase reductase SDR K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 331.0
YYD2_k127_804159_2 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003757 298.0
YYD2_k127_804159_3 Protein conserved in bacteria - - - 0.00000000000000007246 94.0
YYD2_k127_804159_4 Cupin 2, conserved barrel domain protein - - - 0.0000000000000005695 84.0
YYD2_k127_806078_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005789 412.0
YYD2_k127_806078_1 Belongs to the PEP-utilizing enzyme family K01006,K01007 - 2.7.9.1,2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007757 388.0
YYD2_k127_806078_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 368.0
YYD2_k127_806078_3 FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 335.0
YYD2_k127_806078_4 DNA ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 309.0
YYD2_k127_806078_5 PFAM Pyridoxal-dependent decarboxylase conserved domain K01580,K01593,K13745 - 4.1.1.105,4.1.1.15,4.1.1.28,4.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 314.0
YYD2_k127_806078_6 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000000005675 103.0
YYD2_k127_807585_1 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002262 282.0
YYD2_k127_807585_2 Transthyretin K05689,K07127 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006139,GO:0006144,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009112,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0016812,GO:0033971,GO:0034641,GO:0042579,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:1901360,GO:1901564 3.5.2.17 0.000000000000000000000000000000002828 132.0
YYD2_k127_824249_0 Aminotransferase class-III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 589.0
YYD2_k127_824249_1 cell shape determining protein MreB K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004641 507.0
YYD2_k127_824249_2 acetylesterase activity - - - 0.000000000000000000000000000000000002861 153.0
YYD2_k127_825717_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006927 479.0
YYD2_k127_825717_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000004725 93.0
YYD2_k127_832371_0 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000000001481 166.0
YYD2_k127_832371_1 Protein of unknown function (DUF3108) - - - 0.000000000003384 70.0
YYD2_k127_837830_0 Alcohol dehydrogenase GroES-like domain K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006218 559.0
YYD2_k127_837830_1 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000004738 220.0
YYD2_k127_841638_0 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 507.0
YYD2_k127_841638_1 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006163 445.0
YYD2_k127_841638_2 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 357.0
YYD2_k127_841638_3 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005303 312.0
YYD2_k127_841638_4 PFAM beta-lactamase K17836 - 3.5.2.6 0.0000000000000000000000000000000000000000000000003877 188.0
YYD2_k127_841638_5 lactoylglutathione lyase activity K05606 - 5.1.99.1 0.00000000000000000000000000000000000000000000003021 173.0
YYD2_k127_841638_6 Cupin domain - - - 0.00000000000000000000000000000000000000000000006752 171.0
YYD2_k127_841638_7 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000004817 145.0
YYD2_k127_841638_8 PFAM Fibronectin type III domain - - - 0.000000000000000003032 100.0
YYD2_k127_841638_9 Phosphoenolpyruvate phosphomutase K03417 - 4.1.3.30 0.000000000000006343 76.0
YYD2_k127_8596_0 peptidase M24B X-Pro dipeptidase aminopeptidase domain protein K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 440.0
YYD2_k127_8596_1 Carbon monoxide dehydrogenase subunit G (CoxG) K09386 - - 0.0000000000000000000000000000000000761 139.0
YYD2_k127_8596_2 SMART tyrosine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000001082 134.0
YYD2_k127_869694_0 Belongs to the glycosyl hydrolase 3 family K05349 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0008422,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0015926,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 3.2.1.21 9.797e-251 797.0
YYD2_k127_869694_1 TIGRFAM VWFA-related Acidobacterial domain - - - 0.00000000000002125 85.0
YYD2_k127_873050_0 FAD dependent oxidoreductase K00303,K21061 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 533.0
YYD2_k127_873050_1 DinB family - - - 0.000000000000000000000000000000000000005366 151.0
YYD2_k127_873050_2 dehydratase - - - 0.000000000000000000000000000000000375 136.0
YYD2_k127_873050_3 - - - - 0.00000000000000000000000000000001041 130.0
YYD2_k127_873050_4 Alpha/beta hydrolase family K07020 - - 0.0000000000000000000002405 99.0
YYD2_k127_873050_5 Zinc ion binding K11997,K12035 GO:0003008,GO:0003012,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0006936,GO:0006941,GO:0006996,GO:0007010,GO:0007610,GO:0007626,GO:0008150,GO:0008152,GO:0008270,GO:0008345,GO:0009653,GO:0009987,GO:0010927,GO:0016043,GO:0016567,GO:0016740,GO:0019538,GO:0019725,GO:0019787,GO:0022607,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030036,GO:0030154,GO:0030239,GO:0030537,GO:0031032,GO:0031674,GO:0032446,GO:0032501,GO:0032502,GO:0032989,GO:0036211,GO:0042592,GO:0042692,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043292,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044444,GO:0044449,GO:0044464,GO:0046716,GO:0046872,GO:0046914,GO:0048468,GO:0048646,GO:0048747,GO:0048856,GO:0048869,GO:0051146,GO:0055001,GO:0055002,GO:0060249,GO:0061061,GO:0065007,GO:0065008,GO:0070647,GO:0070925,GO:0071704,GO:0071840,GO:0097435,GO:0099080,GO:0099081,GO:0099512,GO:0140096,GO:1901564 2.3.2.27 0.00000000000005611 84.0
YYD2_k127_879393_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.588e-232 728.0
YYD2_k127_879393_1 SPFH Band 7 PHB domain protein - - - 0.00000000000000000000000000000000000003007 149.0
YYD2_k127_879393_2 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000009324 146.0
YYD2_k127_879393_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000022 118.0
YYD2_k127_879393_4 PFAM Bacterial regulatory proteins, gntR family K07979 - - 0.0000000000000000000001944 102.0
YYD2_k127_886516_0 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005363 456.0
YYD2_k127_886516_1 MacB-like periplasmic core domain - - - 0.00000000002762 68.0
YYD2_k127_890697_0 Tetratricopeptide repeat - - - 6.483e-199 638.0
YYD2_k127_890697_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 307.0
YYD2_k127_890697_2 epimerase dehydratase K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007151 299.0
YYD2_k127_890697_3 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000000000000006955 146.0
YYD2_k127_890697_4 Methionine biosynthesis protein MetW - - - 0.000000000000001609 85.0
YYD2_k127_892761_0 Amidohydrolase family - - - 8.001e-211 662.0
YYD2_k127_892761_1 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000009087 134.0
YYD2_k127_895907_0 Heparinase II/III-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 333.0
YYD2_k127_895907_1 Glutamine amidotransferase domain K01953 - 6.3.5.4 0.0000000000000000000007516 96.0
YYD2_k127_895907_2 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase - - - 0.0000000000000000415 94.0
YYD2_k127_89672_0 PFAM phospholipase Carboxylesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002323 252.0
YYD2_k127_89672_1 Protein of unknown function (DUF1211) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001118 239.0
YYD2_k127_89672_2 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000002784 141.0
YYD2_k127_896938_0 Carboxymethylenebutenolidase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007316 444.0
YYD2_k127_896938_1 PD-(D/E)XK nuclease superfamily K16898 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000002576 223.0
YYD2_k127_898689_0 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 330.0
YYD2_k127_898689_1 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000001389 242.0
YYD2_k127_898689_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000329 215.0
YYD2_k127_898689_3 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000003463 203.0
YYD2_k127_906478_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 466.0
YYD2_k127_906478_1 Wd-40 repeat - - - 0.00000000000000000000000000000000000000000000000000000000001748 223.0
YYD2_k127_925425_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004352 435.0
YYD2_k127_925425_1 Aldolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004273 372.0
YYD2_k127_925425_2 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.000308 49.0
YYD2_k127_94686_0 AMP-binding enzyme K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000008228 205.0
YYD2_k127_94686_1 O-Antigen ligase K02847 - - 0.000000000000000000000000000000000000000000000393 185.0
YYD2_k127_94686_2 Tetratricopeptide repeat K12261,K13342 GO:0000268,GO:0003674,GO:0005048,GO:0005052,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005829,GO:0006082,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0015031,GO:0015833,GO:0015919,GO:0016020,GO:0016042,GO:0016043,GO:0016054,GO:0016558,GO:0016560,GO:0017038,GO:0019395,GO:0019752,GO:0030258,GO:0030674,GO:0031090,GO:0031903,GO:0032787,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034440,GO:0034613,GO:0042277,GO:0042579,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0045184,GO:0046395,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0055114,GO:0060090,GO:0065002,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:0098588,GO:0098805,GO:1901575,GO:1990351,GO:1990415,GO:1990429 - 0.00005582 55.0
YYD2_k127_948435_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 382.0
YYD2_k127_948435_1 helix_turn_helix, Lux Regulon K03556 - - 0.000000000004454 76.0
YYD2_k127_949317_0 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 501.0
YYD2_k127_949317_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 475.0
YYD2_k127_949317_2 two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 357.0
YYD2_k127_949317_3 PFAM Peptidase M16 inactive domain K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 331.0
YYD2_k127_949317_4 Trypsin-like serine protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001196 271.0
YYD2_k127_949317_5 histone H2A K63-linked ubiquitination K08884,K11894 - 2.7.11.1 0.0000000000002858 83.0
YYD2_k127_949317_6 - - - - 0.00000005583 59.0
YYD2_k127_967263_0 Glutamine amidotransferases class-II K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 566.0
YYD2_k127_967263_1 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 409.0
YYD2_k127_967263_2 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005744 325.0
YYD2_k127_967263_3 Formyl transferase K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000005453 251.0
YYD2_k127_967263_4 domain protein K02238 - - 0.0000000000000000000000000000000000000000000001363 183.0
YYD2_k127_967369_0 AMP-binding enzyme K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 525.0
YYD2_k127_967369_1 Bacterial regulatory proteins, tetR family K13770 - - 0.00000000000000000000000000000000000000000000000009273 184.0
YYD2_k127_967369_2 mechanosensitive ion channel - - - 0.00000000000000000002979 94.0
YYD2_k127_967369_3 Transposase IS200 like - - - 0.000000000000000000629 93.0
YYD2_k127_986043_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007135 282.0
YYD2_k127_986043_1 FecR protein - - - 0.00000000000000000000000000000000000000000000000000004896 212.0
YYD2_k127_986043_2 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000004531 150.0
YYD2_k127_998958_0 glycyl-tRNA aminoacylation K01880 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009345,GO:0009987,GO:0010467,GO:0016070,GO:0016594,GO:0016597,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042165,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046983,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006288 509.0
YYD2_k127_998958_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.00000000000000000000000004793 108.0
YYD2_k127_998958_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000004447 61.0