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Overview

ID MAG04642
Name YYD2_bin.6
Sample SMP0125
Taxonomy
Kingdom Bacteria
Phylum Krumholzibacteriota
Class Krumholzibacteriia
Order WVZY01
Family JAKEHA01
Genus JAKEHA01
Species
Assembly information
Completeness (%) 85.27
Contamination (%) 1.08
GC content (%) 65.0
N50 (bp) 15,964
Genome size (bp) 3,655,715

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3038

Gene name Description KEGG GOs EC E-value Score Sequence
YYD2_k127_1003714_0 Permease K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006301 490.0
YYD2_k127_1003714_1 Sodium Bile acid symporter family K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009148 484.0
YYD2_k127_1003714_10 - - - - 0.00000000000000000000000000004715 127.0
YYD2_k127_1003714_11 TRAP transporter T-component - - - 0.00000000000000000000000000006772 127.0
YYD2_k127_1003714_12 regulatory protein, arsR - - - 0.000000000000000000000000105 109.0
YYD2_k127_1003714_13 PFAM Tripartite ATP-independent periplasmic transporter, DctQ component - - - 0.00000000000000000001675 99.0
YYD2_k127_1003714_14 Glycosyl transferases group 1 - - - 0.00000000000000000162 98.0
YYD2_k127_1003714_15 cell redox homeostasis - - - 0.00000000000000001351 93.0
YYD2_k127_1003714_16 Glycosyl transferases group 1 - - - 0.0000000000000001667 91.0
YYD2_k127_1003714_2 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 470.0
YYD2_k127_1003714_3 Bacterial extracellular solute-binding protein, family 7 K11688,K21395 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002276 288.0
YYD2_k127_1003714_4 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001297 280.0
YYD2_k127_1003714_5 Cytochrome C biogenesis protein - - - 0.0000000000000000000000000000000000000000000000000000000195 213.0
YYD2_k127_1003714_6 Glycosyl transferase, family 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000007558 206.0
YYD2_k127_1003714_7 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000001194 195.0
YYD2_k127_1003714_8 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.0000000000000000000000000000000000009889 155.0
YYD2_k127_1003714_9 Protein of unknown function (DUF1698) - - - 0.000000000000000000000000000000000002651 150.0
YYD2_k127_100601_0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 7.004e-272 854.0
YYD2_k127_100601_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K02887,K03628 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 529.0
YYD2_k127_100601_10 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000263 212.0
YYD2_k127_100601_11 response regulator, receiver K02030,K13040 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000003482 212.0
YYD2_k127_100601_12 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000000000000000000000000002953 180.0
YYD2_k127_100601_13 enoyl-[acyl-carrier-protein] reductase (NADH) activity K10780 - 1.3.1.104 0.000000000000000000000000000000000000000000000008038 185.0
YYD2_k127_100601_14 response regulator receiver K07658,K07668 - - 0.00000000000000000000000000000000000002711 147.0
YYD2_k127_100601_15 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000524 135.0
YYD2_k127_100601_16 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity K02372,K16363 - 3.5.1.108,4.2.1.59 0.00000000000000000000000000001124 124.0
YYD2_k127_100601_17 Domain of unknown function (DUF4118) K07646 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 2.7.13.3 0.000000000000000000000007276 114.0
YYD2_k127_100601_18 cellulose binding - - - 0.000000001622 61.0
YYD2_k127_100601_19 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00001662 55.0
YYD2_k127_100601_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 528.0
YYD2_k127_100601_20 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0001433 55.0
YYD2_k127_100601_21 peptidyl-tyrosine sulfation - - - 0.0005497 51.0
YYD2_k127_100601_3 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005058 439.0
YYD2_k127_100601_4 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 413.0
YYD2_k127_100601_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 335.0
YYD2_k127_100601_6 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 331.0
YYD2_k127_100601_7 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 311.0
YYD2_k127_100601_8 Diguanylate cyclase, GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004592 275.0
YYD2_k127_100601_9 Domains GAF, HisKA, HATPase_c, GAF, HD-GYP-related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002468 271.0
YYD2_k127_1043891_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 332.0
YYD2_k127_1043891_1 Deoxynucleoside kinase K15518 - 2.7.1.113 0.000000000000000000000000000000000000000000000000000000000112 213.0
YYD2_k127_1043891_2 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine K00950 - 2.7.6.3 0.00000000000000000000000007433 113.0
YYD2_k127_1043891_3 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000003887 100.0
YYD2_k127_1043891_4 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000005805 94.0
YYD2_k127_1043891_5 WD40-like Beta Propeller Repeat - - - 0.0001073 54.0
YYD2_k127_106738_0 Elongation factor SelB, winged helix K03833 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 443.0
YYD2_k127_106738_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 333.0
YYD2_k127_1077833_0 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.0000000000000000002935 100.0
YYD2_k127_1078706_0 PFAM GlcNAc-PI de-N-acetylase - - - 1.24e-238 764.0
YYD2_k127_1078706_1 Sodium:solute symporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 619.0
YYD2_k127_1078706_10 ERAD pathway - - - 0.0000000265 61.0
YYD2_k127_1078706_2 Pyridoxal-phosphate dependent enzyme K01697,K01738 - 2.5.1.47,4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009462 424.0
YYD2_k127_1078706_3 Surface antigen - - - 0.00000000000000000000000000000000000000000000000000000000000000000003499 245.0
YYD2_k127_1078706_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000000000000000000000000008163 218.0
YYD2_k127_1078706_5 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000003554 224.0
YYD2_k127_1078706_6 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000002547 158.0
YYD2_k127_1078706_7 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000001987 139.0
YYD2_k127_1078706_9 Activator of Hsp90 ATPase - - - 0.00000000000000001094 83.0
YYD2_k127_1092828_0 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00334,K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008837 523.0
YYD2_k127_1092828_1 NAD binding K00333,K13378 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 479.0
YYD2_k127_1092828_2 formate dehydrogenase (NAD+) activity K00336,K18006 - 1.12.1.2,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008019 372.0
YYD2_k127_1092828_3 quinone binding K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007067 329.0
YYD2_k127_1092828_4 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006545 247.0
YYD2_k127_1092828_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000001189 243.0
YYD2_k127_1092828_6 NADH-quinone oxidoreductase K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000001295 191.0
YYD2_k127_1092828_7 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.00000000000000000000000000000000000000966 160.0
YYD2_k127_1092828_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332,K05581,K13378 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0044237,GO:0044424,GO:0044464,GO:0045333,GO:0050136,GO:0055114,GO:0071944 1.6.5.3 0.0000000000000000000000000000000002386 144.0
YYD2_k127_1092828_9 CYTH - - - 0.0004084 48.0
YYD2_k127_1139133_0 PFAM UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005083 425.0
YYD2_k127_1139133_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000003729 235.0
YYD2_k127_1139133_2 Redoxin - - - 0.000000000000000000000000000000000000000000001154 179.0
YYD2_k127_1139133_3 lyase activity - - - 0.000000000000000000000006961 118.0
YYD2_k127_1139133_4 Protein of unknown function (DUF1573) - - - 0.000000000000000003752 96.0
YYD2_k127_1139133_5 Protein of unknown function (DUF1573) - - - 0.00000000000003708 82.0
YYD2_k127_1139133_6 chaperone-mediated protein folding - - - 0.000017 57.0
YYD2_k127_1157976_0 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 1.257e-296 922.0
YYD2_k127_1157976_1 Transglycosylase K05366 GO:0003674,GO:0005488,GO:0005515,GO:0042802 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 571.0
YYD2_k127_1157976_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 457.0
YYD2_k127_1157976_3 antisigma factor binding K04749,K06378 - - 0.000000000000002638 81.0
YYD2_k127_1157976_4 transferase activity, transferring glycosyl groups - - - 0.0000000000009276 83.0
YYD2_k127_1179528_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.0 1199.0
YYD2_k127_1179528_1 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 469.0
YYD2_k127_1179528_2 Saccharopine dehydrogenase C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 418.0
YYD2_k127_1179528_3 Domain of unknown function (DUF4153) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 335.0
YYD2_k127_1179528_4 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000001483 228.0
YYD2_k127_1179528_5 Ferric uptake regulator family K22297 - - 0.00000000000000000000000000000000000000000000000000000002017 203.0
YYD2_k127_1179528_6 Alpha/beta hydrolase of unknown function (DUF1100) K06889 - - 0.0000000000000000005295 100.0
YYD2_k127_1179528_7 Protein kinase domain - - - 0.00000000000000007644 91.0
YYD2_k127_1179528_8 BTB/POZ domain K10457,K10461,K10465 GO:0000151,GO:0005575,GO:0005622,GO:0005623,GO:0031461,GO:0031463,GO:0032991,GO:0044424,GO:0044464,GO:1902494,GO:1990234 - 0.0002441 54.0
YYD2_k127_1179528_9 PhoD-like phosphatase K14274,K14645,K20276 - - 0.0009763 52.0
YYD2_k127_118045_0 PFAM glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 417.0
YYD2_k127_118045_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006393 417.0
YYD2_k127_118045_2 7TM receptor with intracellular HD hydrolase K07037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 313.0
YYD2_k127_118045_3 COGs COG1253 Hemolysins and related protein containing CBS domains - - - 0.000000000000000000000000000000000000000000000000000001461 209.0
YYD2_k127_118045_4 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000003067 97.0
YYD2_k127_118045_5 Involved in DNA repair and RecF pathway recombination K03584 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.00000001771 64.0
YYD2_k127_118259_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 8.994e-223 707.0
YYD2_k127_118259_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 3.594e-220 701.0
YYD2_k127_118259_10 May be involved in recombinational repair of damaged DNA K03631 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000003307 260.0
YYD2_k127_118259_11 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002445 246.0
YYD2_k127_118259_12 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000003198 233.0
YYD2_k127_118259_13 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000001192 217.0
YYD2_k127_118259_14 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0000049,GO:0001731,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016020,GO:0016043,GO:0019222,GO:0019538,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032268,GO:0032270,GO:0032790,GO:0032984,GO:0032988,GO:0032991,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043254,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045727,GO:0045948,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065003,GO:0065007,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901193,GO:1901195,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:1904688,GO:1904690,GO:1990856,GO:1990904,GO:2000112,GO:2000765,GO:2000767 - 0.0000000000000000000000000000000000000000000000000000006018 199.0
YYD2_k127_118259_15 ATP-NAD kinase K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000002163 192.0
YYD2_k127_118259_16 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000001982 178.0
YYD2_k127_118259_17 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000002204 145.0
YYD2_k127_118259_18 Capsular exopolysaccharide family - - - 0.000000000000000000000000000000002833 143.0
YYD2_k127_118259_19 Ribosomal protein L35 K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000327 88.0
YYD2_k127_118259_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004728 563.0
YYD2_k127_118259_20 Heparinase II/III-like protein - - - 0.0000000000000001151 95.0
YYD2_k127_118259_21 Polysaccharide biosynthesis/export protein - - - 0.000000000000282 76.0
YYD2_k127_118259_22 chain length determinant protein - - - 0.0000000000005594 82.0
YYD2_k127_118259_23 Polysaccharide biosynthesis/export protein K01991 - - 0.000000000001563 74.0
YYD2_k127_118259_24 Divergent PAP2 family K09775 - - 0.0000000002408 67.0
YYD2_k127_118259_25 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000005109 70.0
YYD2_k127_118259_26 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00001191 54.0
YYD2_k127_118259_27 Glycosyl transferases group 1 - - - 0.00002639 50.0
YYD2_k127_118259_3 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004967 538.0
YYD2_k127_118259_4 NAD(P)H-binding K01784,K02473 - 5.1.3.2,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007031 377.0
YYD2_k127_118259_5 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009681 378.0
YYD2_k127_118259_6 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 330.0
YYD2_k127_118259_7 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008562 302.0
YYD2_k127_118259_8 PFAM Metallophosphoesterase K09769 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 286.0
YYD2_k127_118259_9 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001342 264.0
YYD2_k127_11904_0 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000005039 269.0
YYD2_k127_11904_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0000000000000000000000000000000000000001486 161.0
YYD2_k127_11904_2 Divergent polysaccharide deacetylase K09798 - - 0.0000000000000000000000000000000000000004031 164.0
YYD2_k127_12614_0 Reverse transcriptase (RNA-dependent DNA polymerase) K00986 - 2.7.7.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004956 509.0
YYD2_k127_12614_1 Transposase - - - 0.0000002278 55.0
YYD2_k127_1275561_0 Enoyl-CoA hydratase/isomerase K15513 - 4.1.2.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 618.0
YYD2_k127_1275561_1 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003898 587.0
YYD2_k127_1275561_2 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 480.0
YYD2_k127_1275561_3 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003753 394.0
YYD2_k127_1275561_4 Thermolysin metallopeptidase, catalytic domain K01400 - 3.4.24.28 0.0000000000000000000000000000000000000000000000000000000000001323 246.0
YYD2_k127_1275561_5 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000009131 170.0
YYD2_k127_1275561_6 LVIVD repeat K01179 - 3.2.1.4 0.00000000000000000000001759 119.0
YYD2_k127_1298114_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 1.43e-229 719.0
YYD2_k127_1298114_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 2.418e-229 719.0
YYD2_k127_1298114_10 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000009107 203.0
YYD2_k127_1298114_11 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000002 100.0
YYD2_k127_1298114_12 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000004652 97.0
YYD2_k127_1298114_13 PFAM ATP synthase, Delta Epsilon chain, beta-sandwich domain K02114 - - 0.0000000000004592 72.0
YYD2_k127_1298114_14 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000001077 69.0
YYD2_k127_1298114_15 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000415 68.0
YYD2_k127_1298114_16 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.00000008391 59.0
YYD2_k127_1298114_17 RNHCP domain - - - 0.000683 47.0
YYD2_k127_1298114_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 568.0
YYD2_k127_1298114_3 aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008343 512.0
YYD2_k127_1298114_4 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009836 391.0
YYD2_k127_1298114_5 Peptidase family M1 domain K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 409.0
YYD2_k127_1298114_6 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001634 278.0
YYD2_k127_1298114_7 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005096 269.0
YYD2_k127_1298114_8 Glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000543 242.0
YYD2_k127_1298114_9 dTDP-4-dehydrorhamnose reductase activity K00067,K01790,K19997 - 1.1.1.133,5.1.3.13,5.1.3.26 0.0000000000000000000000000000000000000000000000000000000000000841 230.0
YYD2_k127_1307478_0 Protein kinase domain K08884 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005819 502.0
YYD2_k127_1307478_1 ferredoxin oxidoreductase, alpha subunit K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005514 368.0
YYD2_k127_1307478_10 - - - - 0.00001389 54.0
YYD2_k127_1307478_2 Di-iron-containing protein involved in the repair of iron-sulfur clusters - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 290.0
YYD2_k127_1307478_3 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000283 251.0
YYD2_k127_1307478_4 Phospholipase/Carboxylesterase K06999 - - 0.00000000000000000000000000000000000001675 145.0
YYD2_k127_1307478_5 transcriptional regulator - - - 0.0000000000000000000000000000004201 130.0
YYD2_k127_1307478_6 4Fe-4S dicluster domain K00176 - 1.2.7.3 0.000000000000000001993 90.0
YYD2_k127_1307478_7 LVIVD repeat K01179 - 3.2.1.4 0.000000000000000002204 100.0
YYD2_k127_1307478_8 DOMON domain-containing protein - - - 0.00000000000000004657 96.0
YYD2_k127_1307478_9 helix_turn_helix multiple antibiotic resistance protein K06075 - - 0.000001232 58.0
YYD2_k127_1312982_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004401 595.0
YYD2_k127_1312982_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006661 546.0
YYD2_k127_1312982_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004175 541.0
YYD2_k127_1312982_3 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 554.0
YYD2_k127_1312982_4 Surface antigen K07277 GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.000000000000000000000000000000000000000000000000000006004 214.0
YYD2_k127_1312982_5 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000268 188.0
YYD2_k127_1312982_6 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000008267 144.0
YYD2_k127_1312982_7 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 6.3.5.6,6.3.5.7 0.000000000000000002422 88.0
YYD2_k127_1312982_8 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000002951 75.0
YYD2_k127_1321443_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 1.338e-270 855.0
YYD2_k127_1321443_1 Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 554.0
YYD2_k127_1321443_10 von Willebrand factor (vWF) type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 302.0
YYD2_k127_1321443_11 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003104 273.0
YYD2_k127_1321443_12 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000002714 262.0
YYD2_k127_1321443_13 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000006399 216.0
YYD2_k127_1321443_14 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000006068 198.0
YYD2_k127_1321443_15 Protein of unknown function (DUF1579) - - - 0.000000000000000000000000000000000003204 153.0
YYD2_k127_1321443_16 Tetratricopeptide repeat - - - 0.000000000000000000000001656 114.0
YYD2_k127_1321443_17 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000007446 78.0
YYD2_k127_1321443_18 Psort location CytoplasmicMembrane, score - - - 0.0000000000155 78.0
YYD2_k127_1321443_19 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.000002417 53.0
YYD2_k127_1321443_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 427.0
YYD2_k127_1321443_3 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004328 389.0
YYD2_k127_1321443_4 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 345.0
YYD2_k127_1321443_5 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 325.0
YYD2_k127_1321443_6 PFAM von Willebrand factor type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 325.0
YYD2_k127_1321443_7 Protein of unknown function DUF58 - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 326.0
YYD2_k127_1321443_8 Oxygen tolerance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009666 330.0
YYD2_k127_1321443_9 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 302.0
YYD2_k127_1323608_0 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 368.0
YYD2_k127_1323608_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001327 258.0
YYD2_k127_1323608_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001314 229.0
YYD2_k127_1323608_3 PFAM regulatory protein, MerR K22491 - - 0.000000000000000000000000000000000000000000000000000000000000000368 231.0
YYD2_k127_1323608_4 COG0367 Asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000009558 224.0
YYD2_k127_1323608_5 asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000001374 166.0
YYD2_k127_1323608_6 Glycosyl transferase 4-like K19002 - 2.4.1.337 0.00000000000000000000003811 113.0
YYD2_k127_1323608_7 PFAM Membrane protein of K08972 - - 0.0000000000000000000004853 102.0
YYD2_k127_1323608_8 Membrane - - - 0.0000000000000000004082 93.0
YYD2_k127_1323608_9 COG0436 Aspartate tyrosine aromatic aminotransferase K00812 - 2.6.1.1 0.00000002699 63.0
YYD2_k127_1402560_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1120.0
YYD2_k127_1402560_1 in signal transduction K08482 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004448 612.0
YYD2_k127_1402560_10 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007586 319.0
YYD2_k127_1402560_11 COGs COG1629 Outer membrane receptor protein mostly Fe transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005884 304.0
YYD2_k127_1402560_12 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005425 288.0
YYD2_k127_1402560_13 ABC-type dipeptide oligopeptide nickel transport K02034,K15582 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001906 274.0
YYD2_k127_1402560_14 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001945 276.0
YYD2_k127_1402560_15 COGs COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002357 260.0
YYD2_k127_1402560_16 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000018 248.0
YYD2_k127_1402560_17 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000001119 243.0
YYD2_k127_1402560_18 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000145 259.0
YYD2_k127_1402560_19 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000001069 229.0
YYD2_k127_1402560_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 550.0
YYD2_k127_1402560_20 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000003233 210.0
YYD2_k127_1402560_21 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000003409 218.0
YYD2_k127_1402560_22 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000001496 203.0
YYD2_k127_1402560_23 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000003597 184.0
YYD2_k127_1402560_24 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000002251 187.0
YYD2_k127_1402560_25 Evidence 4 Homologs of previously reported genes of K15977 - - 0.000000000000000000000000000000000000000002362 161.0
YYD2_k127_1402560_26 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000002072 150.0
YYD2_k127_1402560_27 KaiB K08481 - - 0.0000000000000000000000000000000000001143 144.0
YYD2_k127_1402560_28 Cell wall-associated hydrolase (invasion-associated protein) - - - 0.0000000000000000000000000000000000003224 154.0
YYD2_k127_1402560_29 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000001189 143.0
YYD2_k127_1402560_3 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 421.0
YYD2_k127_1402560_30 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000002158 135.0
YYD2_k127_1402560_31 KaiB domain K08481 - - 0.000000000000000000000000000000001814 134.0
YYD2_k127_1402560_32 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000008116 138.0
YYD2_k127_1402560_33 Peptidase M56 - - - 0.00000000000000000000000000000149 136.0
YYD2_k127_1402560_34 Peptidase family M1 domain K01992 - - 0.00000000000000000000000001055 113.0
YYD2_k127_1402560_35 cellulase activity K01201 - 3.2.1.45 0.000000000000000000000921 111.0
YYD2_k127_1402560_36 biopolymer transport protein K03559 - - 0.00000000000007157 77.0
YYD2_k127_1402560_37 Biopolymer transport protein ExbD/TolR - - - 0.00000028 59.0
YYD2_k127_1402560_38 Peptidase M56 K03646 - - 0.000005271 59.0
YYD2_k127_1402560_4 TIGRFAM oligopeptide dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031,K02032,K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008894 402.0
YYD2_k127_1402560_40 - - - - 0.0004255 53.0
YYD2_k127_1402560_5 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 404.0
YYD2_k127_1402560_6 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 357.0
YYD2_k127_1402560_7 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 367.0
YYD2_k127_1402560_8 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000799 358.0
YYD2_k127_1402560_9 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 334.0
YYD2_k127_1486377_0 COG3335 Transposase and inactivated derivatives K07494 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009797 522.0
YYD2_k127_1486377_1 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002136 455.0
YYD2_k127_1486377_2 Protein of unknown function (DUF1214) - - - 0.00000000000000000000000000000000000000000000000000000000000000000003442 236.0
YYD2_k127_1486377_3 deoxyhypusine monooxygenase activity - - - 0.0002035 46.0
YYD2_k127_1489336_0 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 408.0
YYD2_k127_1489336_1 Protein of unknown function (DUF2723) K16928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 398.0
YYD2_k127_1489336_2 Glycosyltransferase like family 2 K03606,K07011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008352 392.0
YYD2_k127_1489336_3 Polysaccharide biosynthesis protein K01784,K08679 - 5.1.3.2,5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 348.0
YYD2_k127_1489336_4 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 341.0
YYD2_k127_1489336_5 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 318.0
YYD2_k127_1489336_6 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 321.0
YYD2_k127_1489336_7 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001348 313.0
YYD2_k127_1489336_8 Tetratricopeptide repeat - - - 0.0000000000000000000000000000001676 142.0
YYD2_k127_1489336_9 Two component regulator propeller - - - 0.00000000000009988 85.0
YYD2_k127_1508313_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 526.0
YYD2_k127_1508313_1 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007271 340.0
YYD2_k127_1508313_10 Protein of unknown function (DUF2723) - - - 0.000000002085 61.0
YYD2_k127_1508313_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000002117 244.0
YYD2_k127_1508313_3 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000005707 204.0
YYD2_k127_1508313_4 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000003111 187.0
YYD2_k127_1508313_5 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000006114 164.0
YYD2_k127_1508313_6 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000001919 160.0
YYD2_k127_1508313_7 lysyltransferase activity K07027 - - 0.00000000000000000000000005216 125.0
YYD2_k127_1508313_8 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000001449 111.0
YYD2_k127_1508313_9 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000003433 69.0
YYD2_k127_151512_0 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 3.35e-297 926.0
YYD2_k127_151512_1 Methionine synthase K00548 - 2.1.1.13 2.172e-212 674.0
YYD2_k127_151512_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006139,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008254,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009129,GO:0009131,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009173,GO:0009175,GO:0009218,GO:0009222,GO:0009259,GO:0009261,GO:0009987,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0030145,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042578,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046049,GO:0046050,GO:0046131,GO:0046133,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000212 231.0
YYD2_k127_151512_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000001751 224.0
YYD2_k127_151512_4 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000004069 206.0
YYD2_k127_151512_5 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000002062 195.0
YYD2_k127_151512_6 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000006364 183.0
YYD2_k127_151512_7 AMP-binding enzyme K12508 - 6.2.1.34 0.0000000000000000227 85.0
YYD2_k127_151512_8 Bacterial lipid A biosynthesis acyltransferase - - - 0.00000000000000183 89.0
YYD2_k127_1516434_0 copper-translocating P-type ATPase K17686 - 3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004659 494.0
YYD2_k127_1516434_1 cation transport ATPase K01533,K17686 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.4,3.6.3.54 0.000000000000000000000000000000000000000000000000000000008944 199.0
YYD2_k127_1534012_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K02337,K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 1.057e-261 820.0
YYD2_k127_1534012_1 Hypothetical methyltransferase K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007716 337.0
YYD2_k127_1534012_2 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000128 156.0
YYD2_k127_1534012_3 aminopeptidase activity - - - 0.00000000000000000000000000000000006298 149.0
YYD2_k127_1545062_0 Belongs to the LarC family K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000001032 243.0
YYD2_k127_1545062_1 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16786,K16787 - - 0.00000000000000000000000000000000000000000001006 180.0
YYD2_k127_1545062_2 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000001845 167.0
YYD2_k127_1545062_4 DNA-templated transcription, initiation K03088 - - 0.0000000000000000006123 94.0
YYD2_k127_1545062_5 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000001211 93.0
YYD2_k127_1545062_6 Belongs to the peptidase S8 family - - - 0.0000002377 62.0
YYD2_k127_1555935_0 Rhodanese Homology Domain K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009847 514.0
YYD2_k127_1555935_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 469.0
YYD2_k127_1555935_2 amino acid activation for nonribosomal peptide biosynthetic process K17713,K20952 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003386 377.0
YYD2_k127_1555935_3 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 321.0
YYD2_k127_1555935_4 Threonine/Serine exporter, ThrE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007414 292.0
YYD2_k127_1555935_5 protein methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000001343 247.0
YYD2_k127_1555935_6 Transcriptional regulator, BadM Rrf2 family - - - 0.00000000000000000000000000000000000003345 148.0
YYD2_k127_1555935_7 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000002677 151.0
YYD2_k127_1555935_8 signal sequence binding K07152 - - 0.0000000000000000000000000000007038 135.0
YYD2_k127_1570443_0 (AIR) carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000195 276.0
YYD2_k127_1570443_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009558 256.0
YYD2_k127_1570443_2 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000008311 171.0
YYD2_k127_1570443_3 thiolester hydrolase activity K01179,K06889,K10773,K15853 - 3.2.1.4,4.2.99.18 0.00000000000000000000000000000004438 137.0
YYD2_k127_1570443_4 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.000004739 52.0
YYD2_k127_1604047_0 elongation factor G K02355 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0030312,GO:0044237,GO:0044464,GO:0071944 - 1.322e-218 698.0
YYD2_k127_1604047_1 Aldehyde dehydrogenase family K00294 - 1.2.1.88 8.244e-211 667.0
YYD2_k127_1604047_10 extracellular polysaccharide biosynthetic process K01153,K05789,K07011,K16554 - 3.1.21.3 0.000000000000000000000000000000000000000005157 169.0
YYD2_k127_1604047_11 spore germination K07790 - - 0.00000000000000000000000000000000000000002355 167.0
YYD2_k127_1604047_12 PFAM thioesterase superfamily K07107 - - 0.00000000000000000000000000001716 123.0
YYD2_k127_1604047_13 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000003274 131.0
YYD2_k127_1604047_14 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000001096 119.0
YYD2_k127_1604047_15 glycosyl transferase group 1 - - - 0.000000000000000000000007169 114.0
YYD2_k127_1604047_16 acylphosphatase activity K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000000001475 94.0
YYD2_k127_1604047_17 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000007583 102.0
YYD2_k127_1604047_18 - - - - 0.0000000000000000001051 104.0
YYD2_k127_1604047_19 O-antigen polymerase - - - 0.0000000000000000009263 99.0
YYD2_k127_1604047_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000466 588.0
YYD2_k127_1604047_20 O-antigen ligase like membrane protein - - - 0.0000000000000003701 92.0
YYD2_k127_1604047_21 Unextendable partial coding region - - - 0.00000000000006565 72.0
YYD2_k127_1604047_22 Archease protein family (MTH1598/TM1083) - - - 0.00000000000706 73.0
YYD2_k127_1604047_24 two-component system sensor-response regulator hybrid protein - - - 0.00000001214 68.0
YYD2_k127_1604047_25 Yip1 domain - - - 0.00000289 57.0
YYD2_k127_1604047_3 PFAM Formylglycine-generating sulfatase enzyme K11912,K20333 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 424.0
YYD2_k127_1604047_4 Transcriptional regulator - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004717 297.0
YYD2_k127_1604047_5 NAD+ binding K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000196 253.0
YYD2_k127_1604047_6 Diacylglycerol kinase catalytic domain - - - 0.0000000000000000000000000000000000000000000000005672 192.0
YYD2_k127_1604047_7 IclR helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000001638 180.0
YYD2_k127_1604047_8 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000001368 176.0
YYD2_k127_1604047_9 ECF sigma factor - - - 0.0000000000000000000000000000000000000000001073 166.0
YYD2_k127_1611343_0 beta-galactosidase activity K01224 - 3.2.1.89 0.0 1107.0
YYD2_k127_1611343_1 Glycosyl hydrolase family 1 K05350 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 587.0
YYD2_k127_1611343_2 Belongs to the ABC transporter superfamily K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000005655 229.0
YYD2_k127_1611343_3 Hydrolase Family 16 - - - 0.0000000000000000000000000000000000000000001929 176.0
YYD2_k127_1611343_4 Oligopeptide/dipeptide transporter, C-terminal region - - - 0.00000000000000000000000000002521 121.0
YYD2_k127_1617056_0 PrkA AAA domain K07180 - - 0.0 1045.0
YYD2_k127_1617056_1 Belongs to the ClpA ClpB family K03696 GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 - 1.264e-316 989.0
YYD2_k127_1617056_10 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007459 277.0
YYD2_k127_1617056_11 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002586 262.0
YYD2_k127_1617056_12 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000001818 262.0
YYD2_k127_1617056_13 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001349 265.0
YYD2_k127_1617056_14 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0015399,GO:0015405,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051234,GO:0051641,GO:0055085,GO:0070727,GO:0071944,GO:0072657,GO:0089705,GO:0097159,GO:0097367,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1990778 - 0.000000000000000000000000000000000000000000000000000000000000000000008808 240.0
YYD2_k127_1617056_15 Psort location Cytoplasmic, score 8.96 K01463 - - 0.000000000000000000000000000000000000000001446 165.0
YYD2_k127_1617056_16 SAM-dependent methyltransferase - - - 0.00000000000000000000000000000000000000003002 164.0
YYD2_k127_1617056_17 Domain of unknown function (DUF374) K02527,K09778 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000002797 169.0
YYD2_k127_1617056_18 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008654,GO:0009029,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0046401,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.7.1.130 0.00000000000000000000000000000000000006252 162.0
YYD2_k127_1617056_19 AMMECR1 domain-containing protein K09141 - - 0.0000000000000000000000000000000000001025 153.0
YYD2_k127_1617056_2 SpoVR like protein K06415 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 587.0
YYD2_k127_1617056_20 Histidine triad (HIT) protein K02503 - - 0.000000000000000000000000000000000003149 143.0
YYD2_k127_1617056_21 PFAM UvrB UvrC protein K19411 - - 0.00000000000000000000000000000000001649 142.0
YYD2_k127_1617056_22 Belongs to the BshC family K22136 - - 0.00000000000000000000005343 114.0
YYD2_k127_1617056_23 Memo-like protein K06990 - - 0.000000000000000001698 89.0
YYD2_k127_1617056_24 unfolded protein binding K06142 - - 0.00000000000000004459 90.0
YYD2_k127_1617056_25 - - - - 0.000000000000002885 81.0
YYD2_k127_1617056_26 Outer membrane receptor - - - 0.0000000005688 72.0
YYD2_k127_1617056_27 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000006353 50.0
YYD2_k127_1617056_3 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 569.0
YYD2_k127_1617056_4 Belongs to the UPF0229 family K09786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004967 470.0
YYD2_k127_1617056_5 Surface antigen K07277 GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004669 445.0
YYD2_k127_1617056_6 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02372,K02535,K13599,K16363 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0019171 3.5.1.108,4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006564 425.0
YYD2_k127_1617056_7 transferase activity, transferring glycosyl groups K00754 GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 386.0
YYD2_k127_1617056_8 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007703 328.0
YYD2_k127_1617056_9 Catalyzes the specific phosphorylation of arginine residues in proteins K19405 - 2.7.14.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007996 314.0
YYD2_k127_1670344_0 Berberine and berberine like - - - 6.284e-242 753.0
YYD2_k127_1670344_1 Cupin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004853 365.0
YYD2_k127_1670344_2 Cupin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006745 368.0
YYD2_k127_1670344_3 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 333.0
YYD2_k127_1670344_4 extracellular matrix structural constituent - - - 0.0000000000000024 91.0
YYD2_k127_1670344_5 Multicopper oxidase - - - 0.0005655 50.0
YYD2_k127_1670344_6 Uncharacterized conserved protein (DUF2075) K09384 - - 0.0008326 44.0
YYD2_k127_1672314_0 peptidase activity - - - 0.0000000000000000000000004659 106.0
YYD2_k127_1703060_0 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006158 326.0
YYD2_k127_1703060_1 Pyruvate ferredoxin/flavodoxin oxidoreductase K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008777 280.0
YYD2_k127_1703060_2 - - - - 0.000000000000000000000000000000000000000000000006959 179.0
YYD2_k127_1703060_3 Aspartyl protease - - - 0.0000000000000000000000000003829 127.0
YYD2_k127_1703060_4 cellulose binding - - - 0.0000000000000000000000000008237 132.0
YYD2_k127_1703060_5 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00005155 48.0
YYD2_k127_1742803_0 UDP binding domain K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005904 486.0
YYD2_k127_1742803_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710,K12450 GO:0000166,GO:0000271,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005975,GO:0005976,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008460,GO:0009058,GO:0009059,GO:0009225,GO:0009226,GO:0009987,GO:0016051,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019305,GO:0019438,GO:0030312,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044464,GO:0045226,GO:0046379,GO:0046383,GO:0046483,GO:0048037,GO:0050662,GO:0051287,GO:0055086,GO:0070404,GO:0071704,GO:0071944,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 4.2.1.46,4.2.1.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 342.0
YYD2_k127_1742803_2 PFAM NAD-dependent epimerase dehydratase K15856 - 1.1.1.281 0.00000000000000000000000000000000000000000000000000000000000000000000001009 254.0
YYD2_k127_1742803_3 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000003169 228.0
YYD2_k127_1801297_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0045333,GO:0046459,GO:0047456,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 0.0 1123.0
YYD2_k127_1801297_1 Flavin containing amine oxidoreductase - - - 1.468e-217 687.0
YYD2_k127_1801297_10 Peptidase family S49 K04773,K04774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007456 282.0
YYD2_k127_1801297_11 Carboxylesterase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000002133 241.0
YYD2_k127_1801297_12 Flavin reductase like domain - - - 0.00000000000000000000000000000000000000000000000000000000006896 212.0
YYD2_k127_1801297_13 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain - - - 0.00000000000000000000000000000000000000000000000000000007509 203.0
YYD2_k127_1801297_14 Serine threonine protein kinase K08884,K12132 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008360,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0022603,GO:0022604,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036211,GO:0040007,GO:0042304,GO:0043085,GO:0043086,GO:0043170,GO:0043388,GO:0043412,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051055,GO:0051098,GO:0051099,GO:0051101,GO:0051128,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.00000000000000000000000000000001406 147.0
YYD2_k127_1801297_15 Transcriptional regulator, BadM Rrf2 family K13643 - - 0.00000000000000000000000000000007954 130.0
YYD2_k127_1801297_16 SMART iron dependent repressor K03709 - - 0.000000000000000000000000000001196 126.0
YYD2_k127_1801297_17 AMP binding - - - 0.0000000000000000000000000006441 125.0
YYD2_k127_1801297_18 - - - - 0.0000000000003664 79.0
YYD2_k127_1801297_2 Radical SAM superfamily K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 549.0
YYD2_k127_1801297_3 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007087 450.0
YYD2_k127_1801297_4 PFAM Glyoxalase bleomycin resistance protein dioxygenase K00457 - 1.13.11.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 445.0
YYD2_k127_1801297_5 homogentisate 12-dioxygenase K00451 - 1.13.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 415.0
YYD2_k127_1801297_6 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000424 397.0
YYD2_k127_1801297_7 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 337.0
YYD2_k127_1801297_8 Flavin containing amine oxidoreductase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006439 324.0
YYD2_k127_1801297_9 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003833 276.0
YYD2_k127_1809985_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000001129 241.0
YYD2_k127_1809985_1 domain protein - - - 0.0000000000000000000000000000000000001018 158.0
YYD2_k127_1809985_2 EamA-like transporter family - - - 0.000000000000000000000000000000000002567 148.0
YYD2_k127_1809985_3 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.00000000000000000000000000794 123.0
YYD2_k127_1809985_4 SprB repeat - - - 0.0000000000000002454 92.0
YYD2_k127_1836649_0 membrane organization - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 508.0
YYD2_k127_1836649_1 Alpha-acetolactate decarboxylase K01575 - 4.1.1.5 0.00000000000000000000000000000000000000000000000000000000000009432 223.0
YYD2_k127_1836649_2 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000000000000000000000000000009955 189.0
YYD2_k127_1836649_3 Putative molybdenum carrier - - - 0.000000000000000000000000000000000000000001279 164.0
YYD2_k127_1836649_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000001875 152.0
YYD2_k127_1836649_5 PFAM RNP-1 like RNA-binding protein - - - 0.000000000000000000000000000002108 124.0
YYD2_k127_1836649_6 NUDIX domain - - - 0.000000000000000000000003662 107.0
YYD2_k127_1836649_7 domain protein - - - 0.0000000000000004667 91.0
YYD2_k127_1842950_0 FlgD Ig-like domain K21449 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 355.0
YYD2_k127_1842950_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000002587 165.0
YYD2_k127_1842950_2 enzyme involved in biosynthesis of extracellular polysaccharides - - - 0.00000000000000000000000000004969 123.0
YYD2_k127_1842950_3 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.00000000004885 70.0
YYD2_k127_1842950_4 Domain of unknown function (DUF4136) - - - 0.00000001928 65.0
YYD2_k127_1842950_5 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.0000006561 56.0
YYD2_k127_1842950_6 TonB family K03832 - - 0.0000008439 61.0
YYD2_k127_1842950_7 ompA family - - - 0.0003731 52.0
YYD2_k127_1850090_0 PFAM NADH Ubiquinone plastoquinone (complex I) K12137 - - 1.918e-256 803.0
YYD2_k127_1850090_1 Proton-conducting membrane transporter K12141 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 601.0
YYD2_k127_1850090_2 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008691 371.0
YYD2_k127_1850090_3 Hydrogenase 4 membrane K12140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002017 275.0
YYD2_k127_1857233_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567,K04568 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006518,GO:0006520,GO:0006629,GO:0006644,GO:0006650,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009405,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019637,GO:0019752,GO:0030312,GO:0030322,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0040007,GO:0042221,GO:0042391,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046471,GO:0046483,GO:0046486,GO:0046677,GO:0046872,GO:0050896,GO:0051704,GO:0065007,GO:0065008,GO:0071704,GO:0071944,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 407.0
YYD2_k127_1857233_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008301 377.0
YYD2_k127_1857233_2 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0000166,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0004140,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019103,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032551,GO:0032552,GO:0032553,GO:0032554,GO:0032557,GO:0032558,GO:0032564,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000002132 58.0
YYD2_k127_1884519_0 Aminotransferase class I and II K10206 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006099 318.0
YYD2_k127_1884519_1 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.000000000000000000000000000000000000000000000000002059 207.0
YYD2_k127_1884519_2 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000002524 149.0
YYD2_k127_1884519_3 UbiA prenyltransferase family K03179,K04040 - 2.5.1.133,2.5.1.39,2.5.1.62 0.000000000000000000004183 106.0
YYD2_k127_1884519_4 Domain of unknown function (DUF4388) - - - 0.00000000000000000003944 102.0
YYD2_k127_1884519_5 COG0457 FOG TPR repeat - - - 0.00004071 57.0
YYD2_k127_188919_0 polysaccharide catabolic process K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000001005 249.0
YYD2_k127_188919_1 DinB superfamily K07552 - - 0.00000000000000000000000000000000000000000006529 169.0
YYD2_k127_188919_2 Histidine phosphatase superfamily (branch 1) - - - 0.0000000000000001236 87.0
YYD2_k127_188919_3 Protein of unknown function (DUF3175) - - - 0.000000001018 66.0
YYD2_k127_188919_4 - - - - 0.0000001552 59.0
YYD2_k127_1896026_0 Alpha-L-fucosidase K01206 - 3.2.1.51 1.141e-211 666.0
YYD2_k127_1896026_1 NADP Oxidoreductase K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000000483 222.0
YYD2_k127_1920417_0 Histidine kinase - - - 1.071e-243 787.0
YYD2_k127_1920417_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007271 340.0
YYD2_k127_1920417_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 318.0
YYD2_k127_1937451_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006676 543.0
YYD2_k127_1937451_1 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000273 287.0
YYD2_k127_1937451_10 amine dehydrogenase activity - - - 0.000000000149 72.0
YYD2_k127_1937451_11 PBP superfamily domain K02040 - - 0.000000007151 67.0
YYD2_k127_1937451_12 Tetratricopeptide repeat - - - 0.000000009364 69.0
YYD2_k127_1937451_13 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000002886 65.0
YYD2_k127_1937451_2 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000006596 219.0
YYD2_k127_1937451_3 biopolymer transport protein K03559 - - 0.0000000000000000000000000003566 119.0
YYD2_k127_1937451_4 biopolymer transport protein - - - 0.000000000000000000000000008275 115.0
YYD2_k127_1937451_5 Glycosyl transferases group 1 - - - 0.000000000000000000000006497 113.0
YYD2_k127_1937451_6 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000000004885 106.0
YYD2_k127_1937451_7 cellulase activity - - - 0.00000000000000007407 93.0
YYD2_k127_1937451_8 Putative bacterial lipoprotein (DUF799) K21008 - - 0.0000000000003078 78.0
YYD2_k127_1937451_9 Peptidoglycan-synthase activator LpoB - - - 0.000000000001437 76.0
YYD2_k127_1962437_0 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001574 251.0
YYD2_k127_1962437_1 Putative lumazine-binding - - - 0.00000000000000000000000000000002772 130.0
YYD2_k127_1962437_2 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000001158 95.0
YYD2_k127_2000491_0 MgsA AAA+ ATPase C terminal K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004556 475.0
YYD2_k127_2000491_1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 299.0
YYD2_k127_2000491_2 endonuclease activity K07451 - - 0.000000000182 67.0
YYD2_k127_2000491_3 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase - - - 0.0000007844 61.0
YYD2_k127_2013318_0 FAD dependent oxidoreductase K00109,K15736 - 1.1.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 427.0
YYD2_k127_2013318_1 - - - - 0.00000000000000000000000000000000000000000004428 165.0
YYD2_k127_2013318_2 Penicillinase repressor - - - 0.000000000000000000000000000000000004397 141.0
YYD2_k127_2013318_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000009437 125.0
YYD2_k127_2013318_4 - - - - 0.0000000000000000000000000006185 132.0
YYD2_k127_2013318_5 lysyltransferase activity K07027 - - 0.0000000000000000000000004736 117.0
YYD2_k127_2013318_6 Bacterial Ig-like domain - - - 0.000000000000000000004956 106.0
YYD2_k127_202679_0 PFAM type I phosphodiesterase nucleotide pyrophosphatase K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000001876 168.0
YYD2_k127_202679_1 thiolester hydrolase activity K07000 - - 0.00000000000000000000000000000000000003905 156.0
YYD2_k127_202679_2 peptidyl-lysine modification to peptidyl-hypusine K00809 - 2.5.1.46 0.000000000000000000000000000000003267 130.0
YYD2_k127_2075769_0 Mut7-C RNAse domain K09122 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000473 282.0
YYD2_k127_2110458_0 CoA carboxylase activity K01966,K01969 - 2.1.3.15,6.4.1.3,6.4.1.4 7.094e-234 735.0
YYD2_k127_2110458_1 Biotin carboxylase K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 516.0
YYD2_k127_2110458_2 Enoyl-CoA hydratase/isomerase K13766,K15312 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000218 253.0
YYD2_k127_2110458_3 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002433 241.0
YYD2_k127_2110458_4 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000008721 205.0
YYD2_k127_2110458_5 Biotin carboxylase, N-terminal domain - - - 0.0000000000000003522 86.0
YYD2_k127_2110458_6 protein kinase activity - - - 0.0000000002074 66.0
YYD2_k127_2134377_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 GO:0003674,GO:0003824,GO:0003938,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 347.0
YYD2_k127_2134377_1 Carbon-nitrogen hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006383 264.0
YYD2_k127_2134377_2 Serine aminopeptidase, S33 K03928 - 3.1.1.1 0.0000000000000008325 88.0
YYD2_k127_2134377_3 two-component system, chemotaxis family, sensor kinase CheA with response regulator domain K03407 - 2.7.13.3 0.00000001625 68.0
YYD2_k127_2134377_4 DNA binding domain, excisionase family - - - 0.0000002713 57.0
YYD2_k127_2150673_0 - - - - 0.0000000000000000000000000000000000000000000000000000000003698 216.0
YYD2_k127_2150673_1 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase - - - 0.0000000000000000000000000000000000000000000000359 178.0
YYD2_k127_2150673_2 - - - - 0.000000000001094 68.0
YYD2_k127_2183876_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005039 523.0
YYD2_k127_2183876_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 295.0
YYD2_k127_2183876_10 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16785 - - 0.00009613 54.0
YYD2_k127_2183876_2 PDZ domain (Also known as DHR or GLGF) K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000006797 256.0
YYD2_k127_2183876_3 tRNA pseudouridine synthase K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000001338 226.0
YYD2_k127_2183876_4 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000004141 226.0
YYD2_k127_2183876_5 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000003732 213.0
YYD2_k127_2183876_6 Carbon-nitrogen hydrolase K03820 - - 0.000000000000000000000000000000000000000000000000005434 193.0
YYD2_k127_2183876_7 - - - - 0.0000000000000000000000000000000000000000007422 164.0
YYD2_k127_2183876_8 NUDIX domain - - - 0.000000000000000000000000000000000000006109 153.0
YYD2_k127_2183876_9 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000003698 138.0
YYD2_k127_2192830_0 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.00000001822 64.0
YYD2_k127_2267834_0 Peptidase M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007404 327.0
YYD2_k127_2267834_1 membrane-bound metal-dependent K07038 - - 0.000000000000000000000000000000000000000000000000000000000000000000156 237.0
YYD2_k127_2267834_2 NAD binding K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000001638 115.0
YYD2_k127_2277080_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 1.604e-249 780.0
YYD2_k127_2277080_1 General secretory system II protein E domain protein K02652 - - 5.29e-198 632.0
YYD2_k127_2277080_10 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000005252 229.0
YYD2_k127_2277080_11 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000000000000000000003603 211.0
YYD2_k127_2277080_12 - - - - 0.0000000000000000000000000001919 131.0
YYD2_k127_2277080_13 peptidyl-tyrosine sulfation - - - 0.000000000000000000000001261 112.0
YYD2_k127_2277080_14 Surface antigen K07277 - - 0.000000000000000000000001601 121.0
YYD2_k127_2277080_15 Pilus assembly protein, PilO K02664 - - 0.000000000000000000003389 103.0
YYD2_k127_2277080_16 Tetratricopeptide repeat - - - 0.00000000000000002561 95.0
YYD2_k127_2277080_17 TonB-dependent receptor - - - 0.00000000000000002822 97.0
YYD2_k127_2277080_18 Type IV pilin PilA K02650 GO:0005575,GO:0005623,GO:0009289,GO:0042995,GO:0044464 - 0.00000000004025 69.0
YYD2_k127_2277080_19 PFAM Fimbrial assembly family protein K02663 - - 0.00000000009596 69.0
YYD2_k127_2277080_2 Two component, sigma54 specific, transcriptional regulator, Fis family K02667,K07713,K07714,K19641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000708 509.0
YYD2_k127_2277080_20 Tetratricopeptide repeats - - - 0.000000009572 68.0
YYD2_k127_2277080_21 Helix-hairpin-helix motif K02237 - - 0.00000001169 62.0
YYD2_k127_2277080_22 domain, Protein - - - 0.0007453 53.0
YYD2_k127_2277080_3 PFAM Phenylalanine and histidine ammonia-lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008615 470.0
YYD2_k127_2277080_4 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007494 455.0
YYD2_k127_2277080_5 Type II secretion system (T2SS), protein F K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 441.0
YYD2_k127_2277080_6 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 392.0
YYD2_k127_2277080_7 phosphorelay sensor kinase activity K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000002052 283.0
YYD2_k127_2277080_8 Type IV pilus assembly protein PilM; K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006761 250.0
YYD2_k127_2277080_9 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000002794 237.0
YYD2_k127_2288046_0 ATPase associated with various cellular K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 304.0
YYD2_k127_2288046_1 - - - - 0.0000000000000000000000000000000000000000000000000000006825 203.0
YYD2_k127_2288046_2 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000005792 197.0
YYD2_k127_2288046_3 COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.00000000000000000000000000000000000000000000000000005844 194.0
YYD2_k127_2288046_4 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000002004 183.0
YYD2_k127_2288046_5 phosphonoacetaldehyde hydrolase activity - - - 0.0000000000000000000000000000000000000000000000126 179.0
YYD2_k127_2288046_6 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000001099 174.0
YYD2_k127_2288046_7 B12 binding domain - - - 0.0000000000000000000000000000000000000000003541 171.0
YYD2_k127_2288046_8 Domain of unknown function (DUF4397) - - - 0.00000000000000000000000000000006231 136.0
YYD2_k127_2288046_9 Domain of unknown function (DUF378) K09779 - - 0.0000000000000001316 87.0
YYD2_k127_2318251_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.671e-244 768.0
YYD2_k127_2318251_1 phosphoglucosamine mutase activity K01840,K03431,K15778 - 5.4.2.10,5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 372.0
YYD2_k127_2318251_10 - - - - 0.00000000000000000000003046 117.0
YYD2_k127_2318251_11 radical SAM domain protein K06137,K06138 - 1.3.3.11 0.00000000000000000001917 101.0
YYD2_k127_2318251_13 lipolytic protein G-D-S-L family - - - 0.00000000000000001663 95.0
YYD2_k127_2318251_14 - - - - 0.0000000002237 65.0
YYD2_k127_2318251_2 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01668 - 4.1.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003202 282.0
YYD2_k127_2318251_3 Domain of Unknown Function (DUF748) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003561 279.0
YYD2_k127_2318251_4 PFAM Ribonuclease BN-like family K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002487 257.0
YYD2_k127_2318251_5 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000281 254.0
YYD2_k127_2318251_6 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000000000000000000000000000000000000006848 195.0
YYD2_k127_2318251_7 CHRD domain - - - 0.00000000000000000000000000000000000000000004768 168.0
YYD2_k127_2318251_8 endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000004231 143.0
YYD2_k127_2318251_9 PFAM Fibronectin type III domain - - - 0.0000000000000000000000000001585 130.0
YYD2_k127_2331729_0 metalloendopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001592 277.0
YYD2_k127_2331729_1 Beta-lactamase superfamily domain K06136 - - 0.000000000000000000000000000000000000000000000000000000000000001887 226.0
YYD2_k127_2331729_2 - - - - 0.000004284 53.0
YYD2_k127_2335475_0 Ribonucleotide reductase, all-alpha domain K00525 - 1.17.4.1 5e-324 1016.0
YYD2_k127_2335475_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 520.0
YYD2_k127_2335475_2 NADH dehydrogenase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 492.0
YYD2_k127_2335475_3 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002246 247.0
YYD2_k127_2335475_4 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000002897 195.0
YYD2_k127_2335475_5 PFAM DivIVA family protein K04074 - - 0.000000000000000000000005364 112.0
YYD2_k127_2335475_6 ribonuclease BN K07058 - - 0.00000000136 69.0
YYD2_k127_2383278_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 525.0
YYD2_k127_2383278_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 304.0
YYD2_k127_2383278_2 SecD/SecF GG Motif K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000003388 245.0
YYD2_k127_2383278_3 histidine kinase, HAMP K13598 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000007594 256.0
YYD2_k127_2383278_4 Domain of unknown function (DUF4159) - - - 0.000000000000000000000000000000000000000000000000000000000000007403 224.0
YYD2_k127_2383278_5 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000001046 178.0
YYD2_k127_2383278_6 cell septum assembly - - - 0.0000000000000000000000000000003499 142.0
YYD2_k127_2383278_7 cell septum assembly - - - 0.0000000000000000000000000006351 126.0
YYD2_k127_2383278_8 cell envelope organization K05807,K08309 - - 0.000001496 61.0
YYD2_k127_2383278_9 TPR repeat - - - 0.00009507 55.0
YYD2_k127_2400351_0 PAS sensor protein K13243 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0008081,GO:0008144,GO:0008150,GO:0009628,GO:0016787,GO:0016788,GO:0019825,GO:0019826,GO:0020037,GO:0036094,GO:0042578,GO:0043167,GO:0043169,GO:0046872,GO:0046906,GO:0048037,GO:0050896,GO:0070482,GO:0071111,GO:0097159,GO:1901363 3.1.4.52 2.945e-240 777.0
YYD2_k127_2400351_1 Belongs to the peptidase M16 family K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 502.0
YYD2_k127_2400351_2 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000628 495.0
YYD2_k127_2400351_3 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006571 444.0
YYD2_k127_2400351_4 metal-dependent phosphohydrolase HD region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 298.0
YYD2_k127_2400351_5 PFAM HD domain - - - 0.0000000000000000000000000000000000001748 156.0
YYD2_k127_2414611_0 Ribonuclease E/G family K08301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 447.0
YYD2_k127_2414611_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009536,GO:0040007,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000002764 239.0
YYD2_k127_2414611_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000007059 215.0
YYD2_k127_2414611_3 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000008603 186.0
YYD2_k127_2414611_4 Belongs to the DNA glycosylase MPG family K03652 GO:0003674,GO:0003824,GO:0003905,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.2.2.21 0.000000000000000000000000000000000000000000002067 171.0
YYD2_k127_2414611_5 serine-type peptidase activity K08676 - - 0.00000000000000000000000000003435 117.0
YYD2_k127_2414611_6 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000001823 100.0
YYD2_k127_2414611_7 Regulator of Microtubule Dynamics - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005819,GO:0005829,GO:0005856,GO:0012505,GO:0015630,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0072686 - 0.000000000000000004109 94.0
YYD2_k127_2414611_8 long-chain fatty acid transport protein - - - 0.00002776 57.0
YYD2_k127_242884_0 serine-type peptidase activity K08676 - - 0.0 1423.0
YYD2_k127_242884_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 5.991e-219 691.0
YYD2_k127_242884_2 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000002214 247.0
YYD2_k127_242884_3 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000000000000000000000002383 133.0
YYD2_k127_242884_4 Ribosomal prokaryotic L21 protein K02888 - - 0.0000000000000000000006567 100.0
YYD2_k127_242884_5 Domain of unknown function (DUF4214) - - - 0.00000008033 64.0
YYD2_k127_2450073_0 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 403.0
YYD2_k127_2450073_1 Protein of unknown function (DUF1365) K00574,K09701 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002109 277.0
YYD2_k127_2450073_2 NAD FAD-binding protein K06954 - - 0.0000000001863 61.0
YYD2_k127_2456859_0 Prokaryotic cytochrome b561 - - - 0.0 1156.0
YYD2_k127_2456859_1 denitrification pathway K15876 GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0044237,GO:0044425,GO:0045333,GO:0055114 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 521.0
YYD2_k127_2456859_2 Cytochrome b subunit of formate dehydrogenase-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 425.0
YYD2_k127_2456859_3 PFAM 5'-nucleotidase, C-terminal domain K07004 - - 0.0000000000000000000000000000000000000000000000000000000000004298 237.0
YYD2_k127_2456859_4 S-adenosylhomocysteine deaminase activity - - - 0.000000000000000000000000000000000000000000000000000001367 218.0
YYD2_k127_2456859_5 amine dehydrogenase activity K21449 - - 0.00000000000000000000000000000000001536 143.0
YYD2_k127_2456859_6 Evidence 5 No homology to any previously reported sequences K07004 - - 0.00000000000000000009039 105.0
YYD2_k127_2456859_7 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000136 91.0
YYD2_k127_2456859_8 metallopeptidase activity - - - 0.00000000241 71.0
YYD2_k127_2478603_0 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 357.0
YYD2_k127_2478603_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 344.0
YYD2_k127_2478603_10 Polysaccharide biosynthesis protein - - - 0.00000004283 64.0
YYD2_k127_2478603_2 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001084 259.0
YYD2_k127_2478603_3 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005445 255.0
YYD2_k127_2478603_4 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000003768 235.0
YYD2_k127_2478603_5 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000001014 231.0
YYD2_k127_2478603_6 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000007339 218.0
YYD2_k127_2478603_7 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000238 164.0
YYD2_k127_2478603_8 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000003768 141.0
YYD2_k127_2478603_9 glycosyl transferase group 1 - - - 0.0000000000000000000000007761 119.0
YYD2_k127_2487508_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 480.0
YYD2_k127_2487508_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007794 357.0
YYD2_k127_2487508_2 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000411 349.0
YYD2_k127_2487508_3 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001065 281.0
YYD2_k127_2487508_4 Cell wall formation K00075 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008762,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0055114,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000353 228.0
YYD2_k127_2487508_5 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000008209 180.0
YYD2_k127_2487508_6 peptidyl-tyrosine sulfation - - - 0.00000000000000000002537 106.0
YYD2_k127_2487508_7 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000006613 84.0
YYD2_k127_2487508_8 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000007075 81.0
YYD2_k127_2487508_9 Cell division protein FtsQ K03589 - - 0.0000000005568 69.0
YYD2_k127_2540842_0 PFAM NADH flavin oxidoreductase NADH oxidase K00219,K09461 - 1.14.13.40,1.3.1.34 9.3e-304 950.0
YYD2_k127_2540842_1 PFAM AMP-dependent synthetase and ligase K04110 - 6.2.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009973 460.0
YYD2_k127_2540842_2 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 428.0
YYD2_k127_2540842_3 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 362.0
YYD2_k127_2540842_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K00019,K07535 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.30 0.00000000000000000000000000000000000000000000000000000000000000003014 232.0
YYD2_k127_2540842_5 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000008326 153.0
YYD2_k127_2540842_6 Glycosyltransferase - - - 0.00000000000000000000000000000000001005 145.0
YYD2_k127_2540842_7 domain protein - - - 0.00000000000000000000000000000000002631 147.0
YYD2_k127_2548586_0 cellulase activity K06882 - - 0.0000000000000000000000000000000000000000000000263 181.0
YYD2_k127_2548586_1 Evidence 5 No homology to any previously reported sequences K17713 - - 0.00000000000000000001431 105.0
YYD2_k127_2548586_2 Permease MlaE - - - 0.0000000000468 64.0
YYD2_k127_2565021_0 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 2.756e-230 722.0
YYD2_k127_2565021_1 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 8.281e-210 666.0
YYD2_k127_2565021_10 cellulose binding K01179,K21449 - 3.2.1.4 0.000000000000000000001453 111.0
YYD2_k127_2565021_11 ligase activity, forming carbon-carbon bonds K00627,K01960 - 2.3.1.12,6.4.1.1 0.00000000000000001067 96.0
YYD2_k127_2565021_12 PFAM glycoside hydrolase, family 13 domain protein - - - 0.000000000000007283 79.0
YYD2_k127_2565021_13 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000211 66.0
YYD2_k127_2565021_14 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000002332 60.0
YYD2_k127_2565021_2 Biotin carboxylase K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 514.0
YYD2_k127_2565021_3 Belongs to the thiolase family K00626 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005156 460.0
YYD2_k127_2565021_4 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 425.0
YYD2_k127_2565021_5 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 351.0
YYD2_k127_2565021_6 TIGRFAM LAO AO transport system ATPase K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000009811 245.0
YYD2_k127_2565021_7 PFAM cobalamin B12-binding domain protein K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000006758 182.0
YYD2_k127_2565021_8 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.00000000000000000000000000000001847 146.0
YYD2_k127_2565021_9 Conserved repeat domain - - - 0.00000000000000000000000000001712 138.0
YYD2_k127_2594684_0 COG2801 Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 474.0
YYD2_k127_2594684_1 Lantibiotic biosynthesis dehydratase C-term K20483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 321.0
YYD2_k127_2594684_2 HTH-like domain K07497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001096 275.0
YYD2_k127_2594684_3 Lanthionine synthetase C-like protein K20484 - - 0.000000000000000000000000000000000000000003219 173.0
YYD2_k127_2594684_4 transcription factor binding K02584 - - 0.0000000000000000000000003436 109.0
YYD2_k127_2594684_5 PFAM Transposase IS3 K07483 - - 0.000000000000000000001263 98.0
YYD2_k127_2661542_0 PFAM Sulfatase K01130 - 3.1.6.1 0.0 1285.0
YYD2_k127_2661542_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 420.0
YYD2_k127_2661542_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000002886 123.0
YYD2_k127_2661542_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000001516 108.0
YYD2_k127_2661542_4 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000000004509 102.0
YYD2_k127_272443_0 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004301 544.0
YYD2_k127_272443_1 smart pdz dhr glgf K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 400.0
YYD2_k127_272443_2 cellulose binding K00505 - 1.14.18.1 0.000000000000000000003616 109.0
YYD2_k127_272443_3 - - - - 0.000000000001661 75.0
YYD2_k127_2741334_0 extracellular matrix structural constituent - - - 0.0000000000000000000000003035 112.0
YYD2_k127_2741334_1 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000000000006825 109.0
YYD2_k127_2749023_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1253.0
YYD2_k127_2749023_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008309 507.0
YYD2_k127_2749023_2 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005186 331.0
YYD2_k127_2749023_3 pectinesterase activity K10297,K15923,K18197,K19615 - 3.2.1.51,4.2.2.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 307.0
YYD2_k127_2749023_4 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008019 270.0
YYD2_k127_2749023_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001116 278.0
YYD2_k127_2749023_6 cellulose binding - - - 0.00000000000000000000000000000000002371 154.0
YYD2_k127_2749023_7 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000006013 111.0
YYD2_k127_2749023_8 LVIVD repeat K01179 - 3.2.1.4 0.00000006228 54.0
YYD2_k127_2770822_0 PFAM AMP-dependent synthetase and ligase K00666,K18660 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 586.0
YYD2_k127_2770822_1 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000001203 192.0
YYD2_k127_2770822_2 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000001165 172.0
YYD2_k127_2770822_3 Low affinity iron permease - - - 0.00000000000000000000000000000000000000002168 156.0
YYD2_k127_2770822_4 - - - - 0.00000001721 65.0
YYD2_k127_2770822_5 bacterial-type flagellum-dependent cell motility - - - 0.0003042 51.0
YYD2_k127_2780274_0 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004424 449.0
YYD2_k127_2780274_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005905 363.0
YYD2_k127_2780274_10 Polymer-forming cytoskeletal - - - 0.000000000000000000003546 101.0
YYD2_k127_2780274_11 Ribosomal RNA small subunit methyltransferase K03501 - 2.1.1.170 0.00000000000404 71.0
YYD2_k127_2780274_12 domain, Protein - - - 0.0000005867 62.0
YYD2_k127_2780274_2 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 314.0
YYD2_k127_2780274_3 TIGRFAM geranylgeranyl reductase K21401 - 1.3.99.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001439 286.0
YYD2_k127_2780274_4 Belongs to the UPF0173 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002636 273.0
YYD2_k127_2780274_5 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001387 254.0
YYD2_k127_2780274_6 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000007067 226.0
YYD2_k127_2780274_7 Peptidase family M23 - - - 0.0000000000000000000000000000000000002113 151.0
YYD2_k127_2780274_8 Lysine exporter protein (Lyse ygga) K11250 - - 0.00000000000000000000000000005865 125.0
YYD2_k127_2780274_9 PFAM response regulator receiver - - - 0.00000000000000000000001724 106.0
YYD2_k127_2792149_0 Epoxide hydrolase N terminus K01253,K21159 - 3.3.2.9 3.435e-226 708.0
YYD2_k127_2792149_1 Epoxide hydrolase N terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004865 587.0
YYD2_k127_2792149_10 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines K01480 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 3.5.3.11 0.0000000000000000000000000000000000000000000000001406 187.0
YYD2_k127_2792149_11 DGC domain - - - 0.00000000000000000000000000000000000000007829 157.0
YYD2_k127_2792149_12 transposition, DNA-mediated K02342 - 2.7.7.7 0.000000000000000000000000000000000000513 154.0
YYD2_k127_2792149_13 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000001436 143.0
YYD2_k127_2792149_15 Belongs to the UPF0102 family K07460 - - 0.00000000000000002706 86.0
YYD2_k127_2792149_16 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000003391 85.0
YYD2_k127_2792149_17 Belongs to the UPF0109 family K06960 - - 0.000000000000009918 79.0
YYD2_k127_2792149_18 - - - - 0.00000000000004392 76.0
YYD2_k127_2792149_19 - - - - 0.000000000003511 77.0
YYD2_k127_2792149_2 General secretory system II, protein E domain protein K02454 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007322 588.0
YYD2_k127_2792149_20 magnesium chelatase K07391 - - 0.0000000001046 63.0
YYD2_k127_2792149_21 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.000000001357 64.0
YYD2_k127_2792149_22 chelatase subunit ChlI K07391 - - 0.00001525 53.0
YYD2_k127_2792149_23 Copper amine oxidase N-terminal domain - - - 0.0008612 50.0
YYD2_k127_2792149_3 Magnesium chelatase, subunit ChlI K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 478.0
YYD2_k127_2792149_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 439.0
YYD2_k127_2792149_5 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 402.0
YYD2_k127_2792149_6 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000228 243.0
YYD2_k127_2792149_7 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) K02626 - 4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000003928 235.0
YYD2_k127_2792149_8 Cytochrome P460 - - - 0.00000000000000000000000000000000000000000000000000000000000001212 222.0
YYD2_k127_2792149_9 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000166 188.0
YYD2_k127_2810797_0 amine dehydrogenase activity - - - 2.197e-223 726.0
YYD2_k127_2810797_1 Catalyzes the NAD( )-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non- methylotrophic organisms K00122 - 1.17.1.9 1.895e-221 698.0
YYD2_k127_2810797_10 glyoxalase III activity - - - 0.000000000000000000000000000000000002208 143.0
YYD2_k127_2810797_11 Protease prsW family - - - 0.00000000000000000000000000000005243 141.0
YYD2_k127_2810797_12 Sigma-70, region 4 K03088 - - 0.00000000000000000000000004322 119.0
YYD2_k127_2810797_13 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000000003056 107.0
YYD2_k127_2810797_14 Histidine kinase-like ATPase domain - - - 0.00000000000000002492 87.0
YYD2_k127_2810797_15 STAS domain - - - 0.0000000005318 65.0
YYD2_k127_2810797_16 Carboxypeptidase regulatory-like domain - - - 0.0000001249 65.0
YYD2_k127_2810797_2 PFAM peptidase M24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007601 539.0
YYD2_k127_2810797_3 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008378 530.0
YYD2_k127_2810797_4 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 483.0
YYD2_k127_2810797_5 23S rRNA (guanine(2445)-N(2))-methyltransferase activity K07444,K12297 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.173,2.1.1.264 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 437.0
YYD2_k127_2810797_6 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000001523 180.0
YYD2_k127_2810797_7 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.0000000000000000000000000000000000000000002439 163.0
YYD2_k127_2810797_8 Class I peptide chain release factor K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.000000000000000000000000000000000000003235 150.0
YYD2_k127_2810797_9 DinB superfamily - - - 0.0000000000000000000000000000000000002203 158.0
YYD2_k127_2831186_0 Amidohydrolase family - - - 0.0 1409.0
YYD2_k127_2831186_1 Peptidase family M3 K01284,K01414 - 3.4.15.5,3.4.24.70 2.686e-276 867.0
YYD2_k127_2831186_10 - - - - 0.00000000000000000000000000000000000000000000000000000000393 207.0
YYD2_k127_2831186_11 - - - - 0.000000000000000000000000000000000000000000000000000000007364 206.0
YYD2_k127_2831186_12 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000000000000000000003749 198.0
YYD2_k127_2831186_13 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000002683 196.0
YYD2_k127_2831186_14 FR47-like protein - - - 0.00000000000000000000000000000000000000007908 156.0
YYD2_k127_2831186_15 PFAM small multidrug resistance protein K11741 - - 0.000000000000000000000000000000000005078 143.0
YYD2_k127_2831186_16 ABC transporter K02049 - - 0.0000000000000000000000000000002769 131.0
YYD2_k127_2831186_17 Protein of unknown function (DUF4242) - - - 0.0000000000000000000000000001531 121.0
YYD2_k127_2831186_18 SnoaL-like domain - - - 0.000000000000000000000000002352 117.0
YYD2_k127_2831186_19 NADPH-dependent FMN reductase - - - 0.00000000000000000000005004 100.0
YYD2_k127_2831186_2 PFAM peptidase S9A prolyl oligopeptidase domain protein beta-propeller K01354 - 3.4.21.83 6.534e-256 809.0
YYD2_k127_2831186_20 GAF domain K08968 - 1.8.4.14 0.0000000000000000001598 97.0
YYD2_k127_2831186_21 positive regulation of macromolecule biosynthetic process K03973 - - 0.000000000000000005651 87.0
YYD2_k127_2831186_22 LVIVD repeat K01179 - 3.2.1.4 0.000000000000244 85.0
YYD2_k127_2831186_23 Divergent 4Fe-4S mono-cluster - - - 0.000000000000386 78.0
YYD2_k127_2831186_24 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.0000001321 66.0
YYD2_k127_2831186_25 protein secretion K20276 - - 0.00001531 59.0
YYD2_k127_2831186_3 cytochrome C peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 544.0
YYD2_k127_2831186_4 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 421.0
YYD2_k127_2831186_5 TIGRFAM ABC transporter, substrate-binding protein, aliphatic sulfonates family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005603 371.0
YYD2_k127_2831186_6 Glyoxalase K07104 - 1.13.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000003623 248.0
YYD2_k127_2831186_7 Protein of unknown function (DUF1211) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002652 241.0
YYD2_k127_2831186_8 HTH domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000005613 235.0
YYD2_k127_2831186_9 PFAM Inositol monophosphatase K01092,K05602 - 3.1.3.15,3.1.3.25 0.00000000000000000000000000000000000000000000000000000000006991 213.0
YYD2_k127_2852247_0 Transposase IS116 IS110 IS902 family protein - - - 0.000000000000000000000000000000000000000000000000000000000009906 224.0
YYD2_k127_2852247_1 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000792 110.0
YYD2_k127_2867739_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 5.714e-284 885.0
YYD2_k127_2867739_1 Belongs to the malate synthase family K01638 - 2.3.3.9 9.561e-236 741.0
YYD2_k127_2867739_10 Peptidase, M16 K07263,K07623 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 443.0
YYD2_k127_2867739_11 Dihydrolipoyl dehydrogenase K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 428.0
YYD2_k127_2867739_12 PFAM Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 422.0
YYD2_k127_2867739_13 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 409.0
YYD2_k127_2867739_14 Dehydrogenase E1 component K00161 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 394.0
YYD2_k127_2867739_15 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 385.0
YYD2_k127_2867739_16 A G-specific adenine glycosylase K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007635 392.0
YYD2_k127_2867739_17 e3 binding domain K00658,K09699 - 2.3.1.168,2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 366.0
YYD2_k127_2867739_18 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 365.0
YYD2_k127_2867739_19 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008382 359.0
YYD2_k127_2867739_2 metallocarboxypeptidase activity K14054 - - 2.199e-229 741.0
YYD2_k127_2867739_20 ATPases associated with a variety of cellular activities K09697 - 3.6.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007422 349.0
YYD2_k127_2867739_21 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113 326.0
YYD2_k127_2867739_22 ABC-2 family transporter protein K09696 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006201 328.0
YYD2_k127_2867739_23 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008054 323.0
YYD2_k127_2867739_24 PFAM pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 306.0
YYD2_k127_2867739_25 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009398 290.0
YYD2_k127_2867739_26 deoxyhypusine monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003092 293.0
YYD2_k127_2867739_27 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000326 278.0
YYD2_k127_2867739_28 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000006312 272.0
YYD2_k127_2867739_29 HD domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006827 273.0
YYD2_k127_2867739_3 FAD linked oxidase domain protein - - - 7.952e-194 615.0
YYD2_k127_2867739_30 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K09818 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001373 259.0
YYD2_k127_2867739_31 Belongs to the UPF0173 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007776 257.0
YYD2_k127_2867739_32 histidine-tRNA ligase activity K01892,K02502 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000336 244.0
YYD2_k127_2867739_33 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid K03328,K16695 - - 0.00000000000000000000000000000000000000000000000000000000000007081 227.0
YYD2_k127_2867739_34 ABC 3 transport family K02075 - - 0.0000000000000000000000000000000000000000000000000000000004709 213.0
YYD2_k127_2867739_35 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000003005 196.0
YYD2_k127_2867739_36 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.000000000000000000000000000000000000000000000000001317 201.0
YYD2_k127_2867739_37 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000001837 191.0
YYD2_k127_2867739_38 Zinc metalloprotease (Elastase) - - - 0.000000000000000000000000000000000000000000000002252 191.0
YYD2_k127_2867739_39 DJ-1 family K03152 - 3.5.1.124 0.0000000000000000000000000000000000000000000000108 177.0
YYD2_k127_2867739_4 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 592.0
YYD2_k127_2867739_40 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009314,GO:0009628,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.0000000000000000000000000000000000000000000006478 175.0
YYD2_k127_2867739_41 Belongs to the helicase family. UvrD subfamily - - - 0.000000000000000000000000000000000000000000003021 176.0
YYD2_k127_2867739_42 Domain of unknown function (DUF892) - - - 0.00000000000000000000000000000000000000000001058 171.0
YYD2_k127_2867739_43 DinB family - - - 0.000000000000000000000000000000000000000006924 159.0
YYD2_k127_2867739_44 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000321 150.0
YYD2_k127_2867739_45 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000001539 123.0
YYD2_k127_2867739_46 PFAM Protein-tyrosine phosphatase, low molecular weight K01104,K20201 - 3.1.3.48,3.9.1.2 0.00000000000000000000000000001665 123.0
YYD2_k127_2867739_48 Polysaccharide deacetylase - - - 0.00000000000000000000000001843 122.0
YYD2_k127_2867739_49 CoA-binding protein K06929 - - 0.00000000000000000000000007464 112.0
YYD2_k127_2867739_5 Fumarylacetoacetate (FAA) hydrolase K01555 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 581.0
YYD2_k127_2867739_50 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.0000000000000000000000005969 121.0
YYD2_k127_2867739_51 Dodecin K09165 - - 0.0000000000000000000000387 104.0
YYD2_k127_2867739_52 extracellular matrix structural constituent - - - 0.00000000000000000000948 106.0
YYD2_k127_2867739_53 - - - - 0.0000000000000000002536 98.0
YYD2_k127_2867739_54 Tfp pilus assembly protein FimV - - - 0.0000000000000000004267 101.0
YYD2_k127_2867739_55 - - - - 0.000000000000002799 84.0
YYD2_k127_2867739_56 Domain of unknown function (DUF4252) - - - 0.00000000000001667 82.0
YYD2_k127_2867739_57 3D domain protein - - - 0.000000003334 67.0
YYD2_k127_2867739_58 domain, Protein - - - 0.000001274 61.0
YYD2_k127_2867739_59 Domain of unknown function (DUF4252) - - - 0.0000288 53.0
YYD2_k127_2867739_6 Isocitrate lyase family K01637 - 4.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005225 561.0
YYD2_k127_2867739_7 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005581 518.0
YYD2_k127_2867739_8 Transketolase, pyrimidine binding domain K00167 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006567 485.0
YYD2_k127_2867739_9 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 466.0
YYD2_k127_2897271_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000001724 248.0
YYD2_k127_2897271_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000008884 59.0
YYD2_k127_2912490_0 DNA polymerase K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0 1080.0
YYD2_k127_2912490_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 380.0
YYD2_k127_2912490_10 Trm112p-like protein K09791 - - 0.00000000000001956 74.0
YYD2_k127_2912490_11 - - - - 0.000000000000759 79.0
YYD2_k127_2912490_12 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000003488 68.0
YYD2_k127_2912490_13 amine dehydrogenase activity - - - 0.00000000001258 76.0
YYD2_k127_2912490_14 - - - - 0.000001898 59.0
YYD2_k127_2912490_15 TRANSCRIPTIONal - - - 0.000002067 55.0
YYD2_k127_2912490_2 Propeptide_C25 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 359.0
YYD2_k127_2912490_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000003753 243.0
YYD2_k127_2912490_4 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000001957 240.0
YYD2_k127_2912490_5 Peptidylprolyl isomerase K01802,K03769,K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000003611 239.0
YYD2_k127_2912490_6 Scavenger mRNA decapping enzyme C-term binding K19710 - 2.7.7.53 0.000000000000000000000000000000000000000000002146 173.0
YYD2_k127_2912490_7 Peptidase family M23 - - - 0.00000000000000000000000000000000000000004475 173.0
YYD2_k127_2912490_8 Two component regulator propeller - - - 0.00000000000000000000000000000000000005158 161.0
YYD2_k127_2912490_9 - - - - 0.00000000000000000001299 103.0
YYD2_k127_295805_0 ABC-type dipeptide transport system periplasmic component K02035 - - 4.243e-212 674.0
YYD2_k127_295805_1 ABC transporter permease K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 466.0
YYD2_k127_295805_2 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003019 385.0
YYD2_k127_295805_3 xyloglucan:xyloglucosyl transferase activity K01216,K07004 - 3.2.1.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009632 392.0
YYD2_k127_295805_4 ABC transporter permease K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001985 377.0
YYD2_k127_295805_5 Glycosyltransferase 36 associated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 355.0
YYD2_k127_295805_6 1,3--beta-D-glucan 3-glucanohydrolase K01186 - 3.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 322.0
YYD2_k127_295805_7 Histidine kinase - - - 0.0000000000000000000002633 97.0
YYD2_k127_2963284_0 alpha beta K06889 - - 0.0000000000000000000000000000000000000002945 166.0
YYD2_k127_2963284_1 CAAX protease self-immunity - - - 0.000000000000002125 83.0
YYD2_k127_2967625_0 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003957 274.0
YYD2_k127_2967625_1 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001455 241.0
YYD2_k127_2967625_2 Protein of unknown function (DUF1254) K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000002775 237.0
YYD2_k127_2967625_3 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000004655 173.0
YYD2_k127_2967625_4 PKD domain - - - 0.0000000000000000000000000000000001671 151.0
YYD2_k127_2967625_5 Belongs to the ompA family - - - 0.000000000000000000000000007659 126.0
YYD2_k127_2967625_6 lipolytic protein G-D-S-L family - - - 0.0000002526 63.0
YYD2_k127_2985212_0 Putative citrate transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 552.0
YYD2_k127_2985212_1 M42 glutamyl aminopeptidase K01258 - 3.4.11.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006104 467.0
YYD2_k127_2985212_10 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0001028 47.0
YYD2_k127_2985212_11 Peptidase family M49 K01277 - 3.4.14.4 0.0006046 44.0
YYD2_k127_2985212_2 major pilin protein fima - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007354 355.0
YYD2_k127_2985212_3 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.0000000000000000000000000000000000000000000000000000001785 204.0
YYD2_k127_2985212_4 Uncharacterized conserved protein (DUF2277) - - - 0.0000000000000000000000000000000003189 133.0
YYD2_k127_2985212_5 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000000000000000001985 136.0
YYD2_k127_2985212_6 glycogen (starch) synthase activity - - - 0.0000000000000000000002696 109.0
YYD2_k127_2985212_7 TIR domain - - - 0.00000000005356 76.0
YYD2_k127_2985212_8 - - - - 0.00000005854 55.0
YYD2_k127_299275_0 Oligoendopeptidase f K01283 - 3.4.15.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005528 544.0
YYD2_k127_299275_1 Belongs to the RtcB family K14415 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006453 499.0
YYD2_k127_299275_10 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000007195 213.0
YYD2_k127_299275_11 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.000000000000000000000000000000000000000000000000000001112 218.0
YYD2_k127_299275_12 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000002876 188.0
YYD2_k127_299275_13 PFAM S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000002484 179.0
YYD2_k127_299275_14 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000003022 151.0
YYD2_k127_299275_15 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000005289 143.0
YYD2_k127_299275_16 Putative heavy-metal-binding - - - 0.00000000000000000000000000000000005256 138.0
YYD2_k127_299275_17 Transporter associated domain K03699 - - 0.00000000000000000000000000000006191 138.0
YYD2_k127_299275_18 MotA/TolQ/ExbB proton channel family K03561,K03562 - - 0.000000000000000000000000005028 121.0
YYD2_k127_299275_19 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.000000000000000000000002914 111.0
YYD2_k127_299275_2 fructose 1,6-bisphosphate 1-phosphatase activity K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016043,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0022607,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901135,GO:1901576 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 486.0
YYD2_k127_299275_20 TPR repeat - - - 0.000000000000000000000003078 115.0
YYD2_k127_299275_21 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997,K01207 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008897,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0018070,GO:0018193,GO:0018209,GO:0018215,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 2.7.8.7,3.2.1.52 0.0000000000000000000002955 108.0
YYD2_k127_299275_22 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.0000000000000000000006138 106.0
YYD2_k127_299275_23 TonB C terminal K03646,K03832 - - 0.0000000000000007044 86.0
YYD2_k127_299275_24 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000004967 81.0
YYD2_k127_299275_26 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000001296 76.0
YYD2_k127_299275_3 ABC transporter substrate-binding protein K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 355.0
YYD2_k127_299275_4 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004414 286.0
YYD2_k127_299275_5 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 - 5.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001296 293.0
YYD2_k127_299275_6 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000002954 246.0
YYD2_k127_299275_7 CBS domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000002903 244.0
YYD2_k127_299275_8 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000002454 236.0
YYD2_k127_299275_9 ZIP Zinc transporter K07238,K11021,K16267 - - 0.000000000000000000000000000000000000000000000000000000003243 209.0
YYD2_k127_3002604_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1088.0
YYD2_k127_3002604_1 Belongs to the aldehyde dehydrogenase family K00128,K00135,K22187 - 1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.79 2.544e-206 652.0
YYD2_k127_3002604_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000000000000000004779 207.0
YYD2_k127_3002604_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000001198 134.0
YYD2_k127_3002604_4 FlgD Ig-like domain - - - 0.000000000000000003004 100.0
YYD2_k127_3002604_5 Heat shock protein DnaJ domain protein - - - 0.00000000000000004277 88.0
YYD2_k127_3002604_6 Belongs to the peptidase S8 family K06113,K12685 - 3.2.1.99 0.0000000000001539 83.0
YYD2_k127_3002604_7 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.00000000001108 74.0
YYD2_k127_3002604_8 photosystem II stabilization - - - 0.0005037 51.0
YYD2_k127_3004034_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 472.0
YYD2_k127_3004034_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006051 387.0
YYD2_k127_3004034_10 Belongs to the MraZ family K03925 - - 0.000000000000001062 82.0
YYD2_k127_3004034_11 Acetyltransferase (GNAT) domain - - - 0.00000000000009771 82.0
YYD2_k127_3004034_12 Dolichyl-phosphate-mannose--protein O-mannosyl transferase - - - 0.000000002186 70.0
YYD2_k127_3004034_13 Methyltransferase - - - 0.000000002369 70.0
YYD2_k127_3004034_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008764,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 340.0
YYD2_k127_3004034_3 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 345.0
YYD2_k127_3004034_4 Belongs to the SEDS family K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000128 256.0
YYD2_k127_3004034_5 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000001809 256.0
YYD2_k127_3004034_6 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000001502 252.0
YYD2_k127_3004034_7 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000083 247.0
YYD2_k127_3004034_8 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000001019 231.0
YYD2_k127_3004034_9 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000005362 110.0
YYD2_k127_3009304_0 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.000000000000000000002197 109.0
YYD2_k127_3009304_1 Belongs to the anti-sigma-factor antagonist family K04749 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000007925 53.0
YYD2_k127_3013455_0 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002006 263.0
YYD2_k127_3013455_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella K01195 - 3.2.1.31 0.0000000000000000000000000000001027 136.0
YYD2_k127_3013455_2 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella K01195 - 3.2.1.31 0.00000000000000000000000004697 125.0
YYD2_k127_3023382_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009391 483.0
YYD2_k127_3023382_1 Spore germination protein K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 462.0
YYD2_k127_3023382_10 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.000000000000000000000000000000000007331 147.0
YYD2_k127_3023382_11 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000005489 107.0
YYD2_k127_3023382_12 MlaD protein K02067 - - 0.0000000000000000000004772 107.0
YYD2_k127_3023382_13 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000000000006096 84.0
YYD2_k127_3023382_14 Carboxylesterase family - - - 0.0000000000000001634 86.0
YYD2_k127_3023382_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K09698 - 6.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 450.0
YYD2_k127_3023382_3 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 441.0
YYD2_k127_3023382_4 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 313.0
YYD2_k127_3023382_5 RimK-like ATP-grasp domain K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000001511 252.0
YYD2_k127_3023382_6 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000007939 242.0
YYD2_k127_3023382_7 LysE type translocator - - - 0.0000000000000000000000000000000000000000000003144 188.0
YYD2_k127_3023382_8 Domain of unknown function (DUF4198) - - - 0.00000000000000000000000000000000000000000003348 184.0
YYD2_k127_3023382_9 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.000000000000000000000000000000000000001758 153.0
YYD2_k127_3037444_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008166 610.0
YYD2_k127_307447_0 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 406.0
YYD2_k127_307447_1 PFAM major facilitator superfamily MFS_1 K08162 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005987 325.0
YYD2_k127_3077326_0 Asparaginase K01424,K13051 - 3.4.19.5,3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009825 357.0
YYD2_k127_3077326_1 - - - - 0.00000000000000000000000000000000004646 147.0
YYD2_k127_3077326_10 extracellular matrix structural constituent - - - 0.0000000000000000002428 104.0
YYD2_k127_3077326_11 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K03088 - - 0.00000901 60.0
YYD2_k127_3077326_2 Immune inhibitor A peptidase M6 K09607 - - 0.00000000000000000000000000000000009302 154.0
YYD2_k127_3077326_3 Immune inhibitor A peptidase M6 - - - 0.0000000000000000000000000000003443 143.0
YYD2_k127_3077326_4 Immune inhibitor A peptidase M6 K09607 - - 0.00000000000000000000000000000186 140.0
YYD2_k127_3077326_5 Trypsin-like serine protease K01337 - 3.4.21.50 0.000000000000000000000004052 114.0
YYD2_k127_3077326_6 cellulose binding K00505 - 1.14.18.1 0.0000000000000000000001257 115.0
YYD2_k127_3077326_7 cellulose binding K00505 - 1.14.18.1 0.0000000000000000000001274 115.0
YYD2_k127_3077326_8 HNH nucleases - - - 0.000000000000000000001978 98.0
YYD2_k127_3077326_9 Histidine kinase-like ATPase domain - - - 0.00000000000000000007308 96.0
YYD2_k127_3078243_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 7.706e-231 728.0
YYD2_k127_3078243_1 Belongs to the NadC ModD family K00278,K00767 GO:0003674,GO:0003824,GO:0004514,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016054,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034213,GO:0034641,GO:0034654,GO:0042737,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0046483,GO:0046496,GO:0046700,GO:0046874,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0072526,GO:0090407,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 1.4.3.16,2.4.2.19 0.000000000000000000000000000000000000000000000000000000000001529 223.0
YYD2_k127_3078243_2 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000176 177.0
YYD2_k127_3078243_3 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000003307 94.0
YYD2_k127_3096315_0 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 379.0
YYD2_k127_3096315_1 glyoxalase III activity - - - 0.000000000000000000000000000000000001517 150.0
YYD2_k127_3096315_2 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K07443 - - 0.0000000000000000000000001457 111.0
YYD2_k127_3096315_3 LVIVD repeat - - - 0.000541 51.0
YYD2_k127_313153_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0030312,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 8.192e-221 721.0
YYD2_k127_313153_1 CobW/HypB/UreG, nucleotide-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 557.0
YYD2_k127_313153_10 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006979 324.0
YYD2_k127_313153_11 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 317.0
YYD2_k127_313153_12 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000003637 267.0
YYD2_k127_313153_13 malonyl coa-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000001601 260.0
YYD2_k127_313153_14 ADP-L-glycero-beta-D-manno-heptose biosynthetic process K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000002795 258.0
YYD2_k127_313153_15 TIGRFAM DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000001423 226.0
YYD2_k127_313153_16 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000001017 209.0
YYD2_k127_313153_17 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000001886 192.0
YYD2_k127_313153_18 repeat-containing protein - - - 0.0000000000000000000000000000000000000000002582 179.0
YYD2_k127_313153_19 ECF sigma factor K03088 - - 0.00000000000000000000000000000000000000001968 161.0
YYD2_k127_313153_2 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000689 554.0
YYD2_k127_313153_20 PFAM Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000002885 173.0
YYD2_k127_313153_21 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000005225 160.0
YYD2_k127_313153_22 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000002566 145.0
YYD2_k127_313153_23 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000002975 141.0
YYD2_k127_313153_24 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.00000000000000000000000000000002171 134.0
YYD2_k127_313153_25 Protein of unknown function (DUF3467) - - - 0.00000000000000000000000002966 111.0
YYD2_k127_313153_26 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000002162 101.0
YYD2_k127_313153_27 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000003323 100.0
YYD2_k127_313153_28 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000005934 90.0
YYD2_k127_313153_29 outer membrane assembly lipoprotein YfiO K05807 - - 0.0000000000000000001261 102.0
YYD2_k127_313153_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005525 519.0
YYD2_k127_313153_30 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0000166,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0004140,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019103,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032551,GO:0032552,GO:0032553,GO:0032554,GO:0032557,GO:0032558,GO:0032564,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000000000000006554 87.0
YYD2_k127_313153_31 long-chain fatty acid transporting porin activity - - - 0.000000000002867 79.0
YYD2_k127_313153_32 Tetratricopeptide repeat - - - 0.0000007089 60.0
YYD2_k127_313153_33 Putative zinc-finger K03088 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.00009875 53.0
YYD2_k127_313153_34 RNA polymerase-associated protein CTR9 homolog K15176 GO:0000122,GO:0000428,GO:0000785,GO:0000993,GO:0001098,GO:0001099,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0008023,GO:0008150,GO:0008152,GO:0008213,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009909,GO:0009910,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0016020,GO:0016043,GO:0016569,GO:0016570,GO:0016571,GO:0016591,GO:0016593,GO:0018022,GO:0018023,GO:0018193,GO:0018205,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0030880,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032259,GO:0032268,GO:0032270,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0033043,GO:0033044,GO:0034243,GO:0034968,GO:0035327,GO:0036211,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044877,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048581,GO:0048831,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051568,GO:0051569,GO:0051571,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070063,GO:0071704,GO:0071840,GO:0080090,GO:0080182,GO:1901564,GO:1902275,GO:1902494,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1905269,GO:1990234,GO:2000026,GO:2000112,GO:2000113,GO:2000241,GO:2000242,GO:2001141,GO:2001252 - 0.0002182 53.0
YYD2_k127_313153_4 Belongs to the FtsK SpoIIIE SftA family K03466 GO:0000003,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0019954,GO:0030436,GO:0031323,GO:0031326,GO:0032502,GO:0043934,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 460.0
YYD2_k127_313153_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003846 425.0
YYD2_k127_313153_6 PFAM Type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 394.0
YYD2_k127_313153_7 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009224 385.0
YYD2_k127_313153_8 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 359.0
YYD2_k127_313153_9 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007391 359.0
YYD2_k127_3132997_0 UDP binding domain K02474 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003785 285.0
YYD2_k127_3132997_1 Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000000000002415 253.0
YYD2_k127_3147814_0 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000004006 113.0
YYD2_k127_32060_0 membrane organization - - - 1.941e-242 775.0
YYD2_k127_32060_1 Cys/Met metabolism PLP-dependent enzyme K01758 - 4.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006407 404.0
YYD2_k127_32060_10 OmpA family K02557 - - 0.000000000000000000000001739 114.0
YYD2_k127_32060_11 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000001109 99.0
YYD2_k127_32060_12 - - - - 0.000000000000001858 79.0
YYD2_k127_32060_14 - - - - 0.0000000000002228 70.0
YYD2_k127_32060_16 Protein of unknown function (DUF1328) - - - 0.000000004754 62.0
YYD2_k127_32060_17 Di-haem oxidoreductase, putative peroxidase - - - 0.00000002421 68.0
YYD2_k127_32060_18 - - - - 0.00000009246 55.0
YYD2_k127_32060_19 Peptidase_C39 like family - - - 0.00002787 57.0
YYD2_k127_32060_2 ATP:ADP antiporter activity K01932,K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 379.0
YYD2_k127_32060_3 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 350.0
YYD2_k127_32060_4 ATP ADP translocase K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007219 333.0
YYD2_k127_32060_5 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 310.0
YYD2_k127_32060_6 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase - - - 0.00000000000000000000000000000000000000000000000003758 189.0
YYD2_k127_32060_7 OsmC-like protein - - - 0.000000000000000000000000000000000000000000000005739 180.0
YYD2_k127_32060_8 GGDEF domain - - - 0.000000000000000000000000000000000000000000000007741 183.0
YYD2_k127_3212262_0 Threonine aldolase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005767 355.0
YYD2_k127_3212262_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000006357 228.0
YYD2_k127_3212262_10 Fibronectin type 3 domain - - - 0.0008077 46.0
YYD2_k127_3212262_2 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000001999 192.0
YYD2_k127_3212262_3 Peptidase family M50 K06402 - - 0.00000000000000000000000000000000000000000003325 175.0
YYD2_k127_3212262_4 Domain of unknown function (DUF366) K09139 - - 0.0000000000000000000000000000000002603 144.0
YYD2_k127_3212262_5 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000003086 142.0
YYD2_k127_3212262_6 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530,K05788 - - 0.000000000000000000000000000003096 122.0
YYD2_k127_3212262_7 queuosine biosynthesis protein QueD K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000006018 102.0
YYD2_k127_3212262_8 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000001902 87.0
YYD2_k127_3212262_9 peptidyl-tyrosine sulfation - - - 0.0000000001129 74.0
YYD2_k127_3226515_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 4.627e-317 992.0
YYD2_k127_3226515_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 569.0
YYD2_k127_3226515_2 bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 474.0
YYD2_k127_3226515_3 SAICAR synthetase K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 355.0
YYD2_k127_3226515_4 PQQ enzyme repeat - - - 0.0000000000000000000000000000000000000000000000000000385 199.0
YYD2_k127_3226515_5 PFAM formyl transferase domain protein K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000004418 192.0
YYD2_k127_3226515_6 soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009274,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000002208 136.0
YYD2_k127_3226515_7 dolichyl monophosphate biosynthetic process K08591 - 2.3.1.15 0.00000000000000000000000558 114.0
YYD2_k127_3226515_8 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000007137 76.0
YYD2_k127_3226515_9 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000004982 69.0
YYD2_k127_3249728_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 8.568e-206 651.0
YYD2_k127_3249728_1 polysaccharide catabolic process K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000001391 263.0
YYD2_k127_3249728_2 LVIVD repeat K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000003049 194.0
YYD2_k127_3249728_3 - - - - 0.00000146 59.0
YYD2_k127_3249728_4 Tetratricopeptide repeat - - - 0.00003246 56.0
YYD2_k127_3297024_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004703 468.0
YYD2_k127_3297024_1 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 421.0
YYD2_k127_3297024_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000007151 177.0
YYD2_k127_3313207_0 endonuclease III K01142,K10773 - 3.1.11.2,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000003019 244.0
YYD2_k127_3313207_1 peptidylprolyl isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000001421 175.0
YYD2_k127_3313207_2 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.000000000000000000000000001293 122.0
YYD2_k127_3313207_3 Transcription factor zinc-finger K09981 - - 0.000003005 54.0
YYD2_k127_3313207_4 peptidyl-tyrosine sulfation - - - 0.0003878 50.0
YYD2_k127_3322906_0 Protein of unknown function (DUF1254) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 586.0
YYD2_k127_3322906_1 RimK-like ATPgrasp N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 543.0
YYD2_k127_3322906_10 N-formylglutamate amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000006075 234.0
YYD2_k127_3322906_11 Cystathionine beta-synthase K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000319 182.0
YYD2_k127_3322906_12 chlorophyll binding K03651,K03771,K07017 - 3.1.4.53,5.2.1.8 0.00000000000000000000000000000000000000000000003878 183.0
YYD2_k127_3322906_13 Protein of unknown function (DUF1697) - - - 0.000000000000000000000000000000000000000000002615 177.0
YYD2_k127_3322906_14 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000001413 150.0
YYD2_k127_3322906_15 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000003655 131.0
YYD2_k127_3322906_16 - - - - 0.00000000000000000000000000000533 122.0
YYD2_k127_3322906_17 - - - - 0.00000000000000000000000000002062 134.0
YYD2_k127_3322906_18 translation initiation factor activity K06996 - - 0.00000000000000000000000001187 122.0
YYD2_k127_3322906_19 - - - - 0.0000000000000000000001149 102.0
YYD2_k127_3322906_2 L-lysine 6-monooxygenase (NADPH-requiring) K07222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 501.0
YYD2_k127_3322906_20 cellulose binding - - - 0.00000000000000002521 89.0
YYD2_k127_3322906_21 C-terminal domain of CHU protein family - - - 0.00000005572 65.0
YYD2_k127_3322906_22 Tricorn protease C1 domain K08676 - - 0.0000006873 62.0
YYD2_k127_3322906_23 Protein of unknown function DUF72 - - - 0.000447 42.0
YYD2_k127_3322906_3 transcription factor binding K15836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003422 504.0
YYD2_k127_3322906_4 Glutamate-cysteine ligase family 2(GCS2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009482 482.0
YYD2_k127_3322906_5 Chorismate mutase type II K14187 - 1.3.1.12,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 433.0
YYD2_k127_3322906_6 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005807 418.0
YYD2_k127_3322906_7 Carbon-nitrogen hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007296 383.0
YYD2_k127_3322906_8 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009549 291.0
YYD2_k127_3322906_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009517 267.0
YYD2_k127_333130_0 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 417.0
YYD2_k127_333130_1 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005421 324.0
YYD2_k127_333130_2 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000002234 185.0
YYD2_k127_333130_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000001276 191.0
YYD2_k127_333130_4 Phospholipid methyltransferase - - - 0.000000000000000000000000000000000000000000001766 169.0
YYD2_k127_333130_5 - - - - 0.00000000000000000000000000000000000135 152.0
YYD2_k127_333130_6 - - - - 0.00000000000000000000000000000000002103 139.0
YYD2_k127_333130_7 - - - - 0.000000000000000000000001499 114.0
YYD2_k127_333130_8 Contains selenocysteine K07401 - - 0.0000000000001855 71.0
YYD2_k127_3335261_0 Protein of unknown function, DUF255 K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004304 448.0
YYD2_k127_3335261_1 Glycosyl transferase family 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 345.0
YYD2_k127_3335261_2 O-methyltransferase K00588 - 2.1.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000000001725 261.0
YYD2_k127_3335261_3 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000007571 237.0
YYD2_k127_3335261_4 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.00000000000000000000000000000000000000000000000000000000000002554 218.0
YYD2_k127_3335261_5 Belongs to the phosphoglycerate mutase family K02226 - 3.1.3.73 0.000000000000000000000000006073 119.0
YYD2_k127_3335261_6 COG0438 Glycosyltransferase - - - 0.00000000000000000002835 106.0
YYD2_k127_3335771_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 555.0
YYD2_k127_3335771_1 COGs COG1022 Long-chain acyl-CoA synthetase (AMP-forming) K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 510.0
YYD2_k127_3335771_10 Hemolysin III K11068 - - 0.00000000000000000000000000000000000000000000000000000000000000000002541 243.0
YYD2_k127_3335771_11 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000002816 191.0
YYD2_k127_3335771_12 virion core protein, lumpy skin disease virus - - - 0.000000000000000000000000000000000000000000000003457 181.0
YYD2_k127_3335771_13 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K06996 - - 0.0000000000000000000000000000000000000000000008328 175.0
YYD2_k127_3335771_15 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00000000000000000000000000000000000008705 161.0
YYD2_k127_3335771_16 membrane K15977 - - 0.0000000000000000000000000000000000002232 145.0
YYD2_k127_3335771_17 ferredoxin-NADP+ reductase activity - - - 0.0000000000000000000000000000008191 134.0
YYD2_k127_3335771_18 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000002035 125.0
YYD2_k127_3335771_19 - - - - 0.0000000000000000000000009877 108.0
YYD2_k127_3335771_2 COG0477 Permeases of the major facilitator superfamily K08151 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 440.0
YYD2_k127_3335771_20 - - - - 0.00000000000000000000001755 107.0
YYD2_k127_3335771_21 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.00000000000000002849 94.0
YYD2_k127_3335771_22 Protein of unknown function (DUF3175) - - - 0.0000000001921 69.0
YYD2_k127_3335771_23 Protein of unknown function (DUF1648) - - - 0.0000005779 57.0
YYD2_k127_3335771_3 heat shock protein binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009166 401.0
YYD2_k127_3335771_4 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 398.0
YYD2_k127_3335771_5 Pyridine nucleotide-disulphide oxidoreductase K00384,K21567 - 1.18.1.2,1.19.1.1,1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000293 332.0
YYD2_k127_3335771_6 PFAM SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000177 273.0
YYD2_k127_3335771_7 racemase activity, acting on amino acids and derivatives K01779 - 5.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001664 272.0
YYD2_k127_3335771_8 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003494 275.0
YYD2_k127_3335771_9 polysaccharide catabolic process K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000001127 254.0
YYD2_k127_3346399_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 8.2e-244 779.0
YYD2_k127_3346399_1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 317.0
YYD2_k127_3346399_2 Coenzyme F420 hydrogenase dehydrogenase, beta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002536 294.0
YYD2_k127_3346399_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K16950 - - 0.0000000000007074 76.0
YYD2_k127_3355994_0 Sodium:neurotransmitter symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 544.0
YYD2_k127_3355994_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008823 514.0
YYD2_k127_3355994_10 GAF domain-containing protein K08968 - 1.8.4.14 0.0000000000000000000000000000000000000000000000000000000000006119 216.0
YYD2_k127_3355994_11 exo-alpha-(2->6)-sialidase activity K01186 GO:0001573,GO:0003674,GO:0003824,GO:0004308,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006664,GO:0006665,GO:0006672,GO:0006687,GO:0006689,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009311,GO:0009313,GO:0009987,GO:0016020,GO:0016042,GO:0016052,GO:0016787,GO:0016798,GO:0016997,GO:0019377,GO:0030149,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044424,GO:0044464,GO:0046466,GO:0046479,GO:0046514,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903509 3.2.1.18 0.0000000000000000000000000000000000000000004712 182.0
YYD2_k127_3355994_12 RNA-binding - - - 0.0000000000000000000000000000002912 126.0
YYD2_k127_3355994_13 Multicopper oxidase K04753 - - 0.00000000000000000000000000001096 138.0
YYD2_k127_3355994_14 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000003542 123.0
YYD2_k127_3355994_15 methyltransferase - - - 0.00000000000000000000007838 110.0
YYD2_k127_3355994_16 Acetyltransferase (Isoleucine patch superfamily) - - - 0.000000000000000000007976 101.0
YYD2_k127_3355994_17 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000001889 98.0
YYD2_k127_3355994_19 Acyl carrier protein - - - 0.0000000002122 66.0
YYD2_k127_3355994_2 Belongs to the ATP-dependent AMP-binding enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 504.0
YYD2_k127_3355994_3 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007 439.0
YYD2_k127_3355994_4 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 355.0
YYD2_k127_3355994_5 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 327.0
YYD2_k127_3355994_6 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 323.0
YYD2_k127_3355994_7 TonB-dependent receptor plug K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004034 304.0
YYD2_k127_3355994_8 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000002976 279.0
YYD2_k127_3355994_9 Belongs to the MtfA family K09933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001781 251.0
YYD2_k127_3367225_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008003 571.0
YYD2_k127_3367225_1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 417.0
YYD2_k127_3367225_2 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000009189 170.0
YYD2_k127_3367225_3 Transglutaminase-like superfamily - - - 0.000000000000000000003946 108.0
YYD2_k127_3367225_4 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000001651 56.0
YYD2_k127_3385138_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000007483 226.0
YYD2_k127_3385138_1 PFAM CBS domain containing protein K06402 - - 0.0000000000000000000000000000000000000000000000000001932 199.0
YYD2_k127_3385138_2 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000004024 179.0
YYD2_k127_3385138_3 beta-fructofuranosidase activity - - - 0.000000000000000001814 100.0
YYD2_k127_3385138_4 Glycosyl hydrolase family 70 K01142,K01176 - 3.1.11.2,3.2.1.1 0.000000000000001479 91.0
YYD2_k127_3385138_5 peptidyl-tyrosine sulfation - - - 0.00000000000002156 83.0
YYD2_k127_3385138_6 domain, Protein - - - 0.00000000007694 75.0
YYD2_k127_3402021_0 Domain of unknown function (DUF1957) K16149 - 2.4.1.18 1.391e-219 694.0
YYD2_k127_3402021_1 glycogen phosphorylase activity K00688,K00691 - 2.4.1.1,2.4.1.8 7.229e-205 661.0
YYD2_k127_3402021_2 Belongs to the glycosyl hydrolase 57 family K22451 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 503.0
YYD2_k127_3402021_3 Glycosyl transferase 4-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 359.0
YYD2_k127_3402021_4 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000002554 182.0
YYD2_k127_3409618_0 FeoA - - - 3.149e-294 920.0
YYD2_k127_3409618_1 lysine biosynthetic process via aminoadipic acid - - - 8.241e-211 681.0
YYD2_k127_3409618_10 cellulose binding - - - 0.000000000000000000001558 112.0
YYD2_k127_3409618_2 Belongs to the aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 542.0
YYD2_k127_3409618_3 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008967 491.0
YYD2_k127_3409618_4 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001309 314.0
YYD2_k127_3409618_5 iron dependent repressor K03709 - - 0.0000000000000000000000000000000000000000000000000000000000000000003908 236.0
YYD2_k127_3409618_6 iron ion homeostasis K03322,K03709,K04758 - - 0.000000000000000000000000000000000000000000000000000000000000000001478 243.0
YYD2_k127_3409618_7 Beta-lactamase - - - 0.00000000000000000000000000000000000000001478 167.0
YYD2_k127_3409618_9 cellulase activity K01201 - 3.2.1.45 0.000000000000000000000008985 116.0
YYD2_k127_3431659_0 Carbon starvation protein K06200 - - 1.365e-203 647.0
YYD2_k127_3431659_1 PFAM Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 502.0
YYD2_k127_3431659_2 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 386.0
YYD2_k127_3431659_3 lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.0000000000000000004548 99.0
YYD2_k127_3447707_0 helicase activity - - - 2.967e-236 756.0
YYD2_k127_3447707_1 ABC transporter transmembrane region K11085 - - 5.568e-233 735.0
YYD2_k127_3447707_10 PFAM Aminotransferase class I and II K00639,K00652,K01906 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29,2.3.1.47,6.2.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 312.0
YYD2_k127_3447707_11 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000003705 232.0
YYD2_k127_3447707_12 PAP2 superfamily - - - 0.0000000000000000000000000000000000000000000000000000000001474 214.0
YYD2_k127_3447707_13 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000002028 213.0
YYD2_k127_3447707_14 transferase activity, transferring acyl groups - - - 0.00000000000000000000000000000000000000000000000000004821 190.0
YYD2_k127_3447707_15 DinB family - - - 0.00000000000000000000000000000000000000000000003537 174.0
YYD2_k127_3447707_16 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000001759 160.0
YYD2_k127_3447707_17 Diacylglycerol kinase catalytic domain (presumed) K07029 - 2.7.1.107 0.000000000000000000000000000000006661 139.0
YYD2_k127_3447707_18 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000000002832 127.0
YYD2_k127_3447707_19 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000003609 130.0
YYD2_k127_3447707_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 2.79e-211 676.0
YYD2_k127_3447707_20 lipid kinase activity - - - 0.0000000000000000001114 101.0
YYD2_k127_3447707_21 Acyltransferase K00655 - 2.3.1.51 0.000000000000001401 87.0
YYD2_k127_3447707_22 - - - - 0.000001471 58.0
YYD2_k127_3447707_3 PFAM multicopper oxidase type 3 - - - 5.916e-209 672.0
YYD2_k127_3447707_4 DNA polymerase K02337,K14162 GO:0000731,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0018130,GO:0019438,GO:0019985,GO:0030312,GO:0031668,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042276,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044464,GO:0046483,GO:0046677,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:1901360,GO:1901362,GO:1901576 2.7.7.7 2.033e-202 641.0
YYD2_k127_3447707_5 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 1.341e-201 638.0
YYD2_k127_3447707_6 ERAP1-like C-terminal domain K01256,K01263 - 3.4.11.14,3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 623.0
YYD2_k127_3447707_7 Pyridine nucleotide-disulphide oxidoreductase K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008729 536.0
YYD2_k127_3447707_8 Cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000712 394.0
YYD2_k127_3447707_9 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 323.0
YYD2_k127_3493431_0 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001452 280.0
YYD2_k127_3520717_0 Domain of unknown function (DUF4139) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004109 428.0
YYD2_k127_3520717_1 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000002471 255.0
YYD2_k127_3520717_2 Rhomboid family - - - 0.000000000000000000000000000000000000000000000008354 183.0
YYD2_k127_3520717_3 Thioredoxin K03671 - - 0.0000000000000000000000000000000000000007533 156.0
YYD2_k127_3520717_4 Preprotein translocase SecG subunit K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000000209 73.0
YYD2_k127_3520717_5 Protein of unknown function (DUF4446) - - - 0.000000001735 65.0
YYD2_k127_3537271_0 PFAM deoxyhypusine synthase K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009429 532.0
YYD2_k127_3537271_1 Glycosyltransferase like family 2 K11936 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 452.0
YYD2_k127_3537271_10 - - - - 0.0000000000000000000000000000000000002132 149.0
YYD2_k127_3537271_11 KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.000000000000000000000000000000000006307 149.0
YYD2_k127_3537271_12 deacetylase K21478 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000001804 145.0
YYD2_k127_3537271_13 DOMON domain-containing protein - - - 0.00000000000000000000000000000004691 141.0
YYD2_k127_3537271_14 FlgD Ig-like domain K21449 - - 0.00000000000000006207 94.0
YYD2_k127_3537271_15 - - - - 0.0000000000000008222 84.0
YYD2_k127_3537271_16 - - - - 0.000000000000002742 78.0
YYD2_k127_3537271_17 - - - - 0.00000000001989 65.0
YYD2_k127_3537271_18 Sigma factor PP2C-like phosphatases - - - 0.00000000003766 74.0
YYD2_k127_3537271_19 - - - - 0.000000006517 68.0
YYD2_k127_3537271_2 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 404.0
YYD2_k127_3537271_20 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000001691 64.0
YYD2_k127_3537271_21 Protein of unknown function (DUF1549) - - - 0.0004528 48.0
YYD2_k127_3537271_3 stress-induced mitochondrial fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 320.0
YYD2_k127_3537271_4 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001022 265.0
YYD2_k127_3537271_5 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002246 248.0
YYD2_k127_3537271_6 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000000000000000000000000000000000000000000009294 246.0
YYD2_k127_3537271_7 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000001832 235.0
YYD2_k127_3537271_8 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000002514 205.0
YYD2_k127_3537271_9 Belongs to the uridine kinase family K00876 - 2.7.1.48 0.00000000000000000000000000000000000002687 153.0
YYD2_k127_3556598_0 C-methyltransferase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 567.0
YYD2_k127_3556598_1 epimerase dehydratase K01710,K01784 - 4.2.1.46,5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 506.0
YYD2_k127_3556598_10 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000004579 208.0
YYD2_k127_3556598_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00066 - 1.1.1.132 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 501.0
YYD2_k127_3556598_3 Nucleotidyl transferase K00978 - 2.7.7.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006012 370.0
YYD2_k127_3556598_4 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 361.0
YYD2_k127_3556598_5 pfam abc K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003976 338.0
YYD2_k127_3556598_6 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001958 259.0
YYD2_k127_3556598_7 PFAM glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005796 258.0
YYD2_k127_3556598_8 ABC-2 type transporter K01992,K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001215 251.0
YYD2_k127_3556598_9 involved in lipopolysaccharide K03606 - - 0.000000000000000000000000000000000000000000000000000000000002406 217.0
YYD2_k127_3585818_0 Beta-lactamase - - - 3.017e-263 826.0
YYD2_k127_3585818_1 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K01955 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000001627 243.0
YYD2_k127_3585818_10 lipoprotein NlpE involved in copper resistance - - - 0.000006622 55.0
YYD2_k127_3585818_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000007789 250.0
YYD2_k127_3585818_3 involved in chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000002019 177.0
YYD2_k127_3585818_4 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000001788 152.0
YYD2_k127_3585818_5 Multicopper oxidase K04753 - - 0.00000000000000000000000000000001643 148.0
YYD2_k127_3585818_7 Acid phosphatase homologues - - - 0.000000000000000000000002813 112.0
YYD2_k127_3585818_8 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000001586 98.0
YYD2_k127_3585818_9 cellulose binding K13735 - - 0.000000000002021 78.0
YYD2_k127_3593067_0 COGs COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 522.0
YYD2_k127_3593067_1 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003421 405.0
YYD2_k127_3593067_2 OST-HTH/LOTUS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000481 271.0
YYD2_k127_3593067_3 OST-HTH/LOTUS domain - - - 0.0000000000000000000000000007666 115.0
YYD2_k127_3593067_4 SdrD B-like domain - - - 0.0000000000000000000000000008061 129.0
YYD2_k127_3616733_0 Beta-eliminating lyase K01667 - 4.1.99.1 4.02e-214 672.0
YYD2_k127_3616733_1 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01668 - 4.1.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 469.0
YYD2_k127_3616733_2 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000005195 156.0
YYD2_k127_3616733_3 Multicopper oxidase K04753 - - 0.000000000000000001324 100.0
YYD2_k127_3616733_4 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000002686 93.0
YYD2_k127_3626009_0 Sigma factor PP2C-like phosphatases K04757,K07315 - 2.7.11.1,3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000734 572.0
YYD2_k127_3626009_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000001146 196.0
YYD2_k127_3626009_2 Cellulose biosynthesis protein BcsQ K03496 - - 0.0000000000000000000000000000000000000000000001534 176.0
YYD2_k127_3626009_3 Anti-sigma factor antagonist K04749,K06378 - - 0.000000000000000000000000000000009162 133.0
YYD2_k127_3626009_4 Anti-sigma factor antagonist K04749,K06378 - - 0.0000000000000000000000000004053 118.0
YYD2_k127_3626009_5 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000008008 121.0
YYD2_k127_3626009_6 Anti-sigma factor antagonist K04749,K06378 - - 0.000000000000000002517 102.0
YYD2_k127_3626009_7 Anti-sigma factor antagonist K02066,K04749 - - 0.000000000000002439 92.0
YYD2_k127_3626009_8 domain protein - - - 0.00000000003428 79.0
YYD2_k127_3626009_9 Tetratricopeptide repeat - - - 0.000007826 58.0
YYD2_k127_3630074_0 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 473.0
YYD2_k127_3630074_1 MreB/Mbl protein K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006683 466.0
YYD2_k127_3630074_10 rod shape-determining protein MreD K03571 - - 0.0002804 50.0
YYD2_k127_3630074_11 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0004809 47.0
YYD2_k127_3630074_2 TIGRFAM Glyceraldehyde-3-phosphate dehydrogenase, type I K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 445.0
YYD2_k127_3630074_3 Penicillin-binding protein 2 K05515 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0071972,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 381.0
YYD2_k127_3630074_4 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005759 302.0
YYD2_k127_3630074_5 RadC-like JAB domain K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000003053 235.0
YYD2_k127_3630074_6 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000345 202.0
YYD2_k127_3630074_7 regulation of cell shape K03570 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007163,GO:0008150,GO:0008360,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0030428,GO:0031224,GO:0031226,GO:0042546,GO:0043621,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071554,GO:0071840,GO:0071944,GO:0071963 - 0.00000000000000000000000007961 117.0
YYD2_k127_3630074_8 PFAM Phosphoribosyltransferase K02242 - - 0.000000000000000000004861 103.0
YYD2_k127_3630074_9 Rhomboid family - - - 0.00000000001634 76.0
YYD2_k127_3645474_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169,K03737 - 1.2.7.1 0.0 1564.0
YYD2_k127_3645474_1 2-hydroxyglutaryl-CoA dehydratase, D-component K04113 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009256 614.0
YYD2_k127_3645474_10 Helix-hairpin-helix class 2 (Pol1 family) motifs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 367.0
YYD2_k127_3645474_11 Benzoyl-CoA reductase subunit K04115 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004277 325.0
YYD2_k127_3645474_12 Domain of unknown function (DUF4010) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 326.0
YYD2_k127_3645474_13 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000005256 248.0
YYD2_k127_3645474_14 Enoyl-(Acyl carrier protein) reductase K00023,K00059 - 1.1.1.100,1.1.1.36 0.0000000000000000000000000000000000000000000000000000003515 208.0
YYD2_k127_3645474_15 pfam nudix - - - 0.00000000000000000000000000000000000000000000002609 174.0
YYD2_k127_3645474_16 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000001674 140.0
YYD2_k127_3645474_17 nuclear chromosome segregation - - - 0.000000000000000000000002449 115.0
YYD2_k127_3645474_18 helix_turn_helix, Lux Regulon - - - 0.000000000000005659 85.0
YYD2_k127_3645474_19 FeoA K04758 - - 0.000000000000687 76.0
YYD2_k127_3645474_2 oxidoreductase activity, acting on diphenols and related substances as donors K09471 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0044424,GO:0044464,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 543.0
YYD2_k127_3645474_20 Stress-induced bacterial acidophilic repeat motif - - - 0.000000008349 65.0
YYD2_k127_3645474_21 Single Cache domain 2 K02480 - 2.7.13.3 0.00000001793 58.0
YYD2_k127_3645474_3 Enoyl-CoA hydratase/isomerase K07539 - 3.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 506.0
YYD2_k127_3645474_4 ferrous iron transmembrane transporter activity K04759 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004481 494.0
YYD2_k127_3645474_5 Benzoyl-CoA reductase subunit K04114 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002295 479.0
YYD2_k127_3645474_6 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 462.0
YYD2_k127_3645474_7 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 439.0
YYD2_k127_3645474_8 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 421.0
YYD2_k127_3645474_9 Alanine dehydrogenase/PNT, C-terminal domain K07538 - 1.1.1.368 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 376.0
YYD2_k127_3651904_0 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 486.0
YYD2_k127_3651904_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 296.0
YYD2_k127_3651904_2 transcription factor binding K02584,K11914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003585 297.0
YYD2_k127_3651904_3 Belongs to the peptidase S8 family - - - 0.000000001226 70.0
YYD2_k127_367042_0 Protein export membrane protein - - - 1.53e-322 1016.0
YYD2_k127_367042_1 DNA helicase K03657 GO:0000018,GO:0000166,GO:0000287,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0009892,GO:0009987,GO:0010605,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030312,GO:0030554,GO:0031323,GO:0031324,GO:0032392,GO:0032508,GO:0032552,GO:0032554,GO:0032558,GO:0032564,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0036094,GO:0040007,GO:0042623,GO:0043138,GO:0043140,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0045910,GO:0045934,GO:0046483,GO:0046872,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051276,GO:0051716,GO:0060255,GO:0060542,GO:0060543,GO:0065007,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.000000000000000000000000000000000000000000000001876 201.0
YYD2_k127_367042_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000002548 185.0
YYD2_k127_367042_3 HNH nucleases - - - 0.0000000000000000000000071 111.0
YYD2_k127_367042_4 resistance protein K15725 - - 0.00000004097 65.0
YYD2_k127_367042_5 COG0210 Superfamily I DNA and RNA - - - 0.000005626 60.0
YYD2_k127_3686123_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 1.109e-230 733.0
YYD2_k127_3686123_1 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 524.0
YYD2_k127_3686123_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009592 277.0
YYD2_k127_3686123_3 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000002866 213.0
YYD2_k127_3686123_4 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000002241 202.0
YYD2_k127_3686123_5 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000002783 180.0
YYD2_k127_3686123_6 YCII-related domain - - - 0.00000000000000000000000000000002268 132.0
YYD2_k127_3686123_7 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 GO:0003674,GO:0003824,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.15,2.7.6.3 0.00000000000000000000000001016 121.0
YYD2_k127_3686123_8 - - - - 0.0001209 45.0
YYD2_k127_3761876_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000008614 137.0
YYD2_k127_3761876_1 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000003505 126.0
YYD2_k127_3761876_2 PFAM Amino acid permease K03294 - - 0.000000000000000000000000004451 119.0
YYD2_k127_3761876_3 Acetyltransferase (GNAT) domain - - - 0.0000000000002419 78.0
YYD2_k127_3772117_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 2.188e-253 792.0
YYD2_k127_3784990_0 Sulfite exporter TauE/SafE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 323.0
YYD2_k127_3784990_1 alpha beta - - - 0.0000000000000000000000000000000000000000000007726 189.0
YYD2_k127_3784990_3 HYR domain - - - 0.0000000000000000000002043 111.0
YYD2_k127_3784990_4 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032991,GO:0032993,GO:0033554,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 3.4.21.88 0.000000000000162 71.0
YYD2_k127_3798216_0 AcrB/AcrD/AcrF family K15726 - - 0.0 1161.0
YYD2_k127_3798216_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 4.888e-289 907.0
YYD2_k127_3798216_10 HlyD family secretion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004409 367.0
YYD2_k127_3798216_11 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 373.0
YYD2_k127_3798216_12 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009659 274.0
YYD2_k127_3798216_13 Surface antigen - - - 0.0000000000000000000000000000000000000000000000000000000000000000008524 243.0
YYD2_k127_3798216_14 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000008952 235.0
YYD2_k127_3798216_15 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000003332 218.0
YYD2_k127_3798216_16 Protein of unknown function (DUF1349) - - - 0.00000000000000000000000000000000000000000000000000000000006856 229.0
YYD2_k127_3798216_17 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000001331 198.0
YYD2_k127_3798216_18 cellulose binding - - - 0.000000000000000000000000000000000000000007522 176.0
YYD2_k127_3798216_19 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000133 166.0
YYD2_k127_3798216_2 haloacid dehalogenase-like hydrolase K01534 - 3.6.3.3,3.6.3.5 1.069e-207 668.0
YYD2_k127_3798216_20 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000001091 153.0
YYD2_k127_3798216_21 peptidyl-tyrosine sulfation K13992 - - 0.00000000000000000000000000000000000002779 153.0
YYD2_k127_3798216_22 NlpC/P60 family - - - 0.00000000000000000000000000002089 124.0
YYD2_k127_3798216_23 Belongs to the GbsR family - - - 0.0000000000000000000000003338 114.0
YYD2_k127_3798216_24 GAF domain-containing protein K08968 - 1.8.4.14 0.00000000000000000000008751 112.0
YYD2_k127_3798216_25 Protein of unknown function (DUF2905) - - - 0.0000000000000001096 89.0
YYD2_k127_3798216_26 Stage II sporulation protein E (SpoIIE) - - - 0.00000000005184 71.0
YYD2_k127_3798216_27 cellulose binding - - - 0.0000001581 65.0
YYD2_k127_3798216_28 guanyl-nucleotide exchange factor activity - - - 0.0001326 51.0
YYD2_k127_3798216_3 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 1.187e-207 670.0
YYD2_k127_3798216_4 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 5.515e-197 633.0
YYD2_k127_3798216_5 Protein of unknown function (DUF3641) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 428.0
YYD2_k127_3798216_6 Peptidase family M49 K01277 - 3.4.14.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 429.0
YYD2_k127_3798216_7 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 409.0
YYD2_k127_3798216_8 Belongs to the MIP aquaporin (TC 1.A.8) family K02440,K06188 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005335 378.0
YYD2_k127_3798216_9 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004878 376.0
YYD2_k127_3825644_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 4.639e-257 815.0
YYD2_k127_3825644_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009175 529.0
YYD2_k127_3825644_10 PFAM glycoside hydrolase, family 13 domain protein - - - 0.00000000001226 79.0
YYD2_k127_3825644_11 peptidase activity, acting on L-amino acid peptides K07752 - 3.4.17.22 0.0000000001699 62.0
YYD2_k127_3825644_12 - - - - 0.00005972 45.0
YYD2_k127_3825644_2 PFAM acyl-CoA dehydrogenase domain protein K00252 - 1.3.8.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005146 466.0
YYD2_k127_3825644_3 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0040007,GO:0044424,GO:0044464,GO:0055114 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 463.0
YYD2_k127_3825644_4 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 421.0
YYD2_k127_3825644_5 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 402.0
YYD2_k127_3825644_6 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 309.0
YYD2_k127_3825644_7 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009093 294.0
YYD2_k127_3825644_8 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002329 283.0
YYD2_k127_3825644_9 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000223 208.0
YYD2_k127_3833582_0 ABC transporter - - - 6.578e-244 767.0
YYD2_k127_3833582_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000002858 224.0
YYD2_k127_3833582_2 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000002362 199.0
YYD2_k127_3833582_3 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000001549 166.0
YYD2_k127_3833582_4 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000001694 158.0
YYD2_k127_3833582_5 Cupin domain - - - 0.00000000000000007163 88.0
YYD2_k127_3833582_6 RibD C-terminal domain - - - 0.000000004378 57.0
YYD2_k127_3836087_0 Elements of external origin K07494 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005995 563.0
YYD2_k127_3836087_1 NADH flavin oxidoreductases, Old Yellow Enzyme family K00219 - 1.3.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000555 294.0
YYD2_k127_3836087_2 Parallel beta-helix repeats - - - 0.0000000000000000000000000003962 117.0
YYD2_k127_3839114_0 Multicopper oxidase K06324 - 1.16.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 360.0
YYD2_k127_3839114_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0000002702 63.0
YYD2_k127_3842664_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 1.728e-207 653.0
YYD2_k127_3842664_1 PFAM Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000354 244.0
YYD2_k127_3842664_2 Protein of unknown function (DUF541) K09797 - - 0.00000000000000000000000000000000000000000000000000001607 199.0
YYD2_k127_3842664_3 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000001014 171.0
YYD2_k127_3842664_4 Participates in initiation and elongation during chromosome replication K02314 GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 0.00000000000000000009708 100.0
YYD2_k127_3844965_0 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 388.0
YYD2_k127_3844965_1 Peptidase M28 - - - 0.00000000000000000000000000000000000000000000000000000001261 210.0
YYD2_k127_3844965_2 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000005759 123.0
YYD2_k127_3844965_3 Participates in both transcription termination and antitermination K02600 GO:0001000,GO:0001121,GO:0001125,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043175,GO:0043244,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000476 102.0
YYD2_k127_3890652_0 Alpha-L-fucosidase K01206 - 3.2.1.51 7.851e-204 642.0
YYD2_k127_3890652_1 NADP Oxidoreductase K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000001875 224.0
YYD2_k127_3895662_0 - K01992 - - 4.8e-309 971.0
YYD2_k127_3895662_1 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 547.0
YYD2_k127_3895662_10 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000001525 165.0
YYD2_k127_3895662_11 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000004862 150.0
YYD2_k127_3895662_12 Acyl-CoA hydrolase - - - 0.0000000000000000000000000000000000008842 143.0
YYD2_k127_3895662_13 Roadblock/LC7 domain - - - 0.000000000000000000000000000000000008808 142.0
YYD2_k127_3895662_14 DoxX - - - 0.0000000000000000000000000000000007026 136.0
YYD2_k127_3895662_15 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000001962 103.0
YYD2_k127_3895662_16 Methylenetetrahydrofolate reductase - - - 0.00000000003004 74.0
YYD2_k127_3895662_17 Fe-S protein K06938 - - 0.000000002187 65.0
YYD2_k127_3895662_18 Recombinase zinc beta ribbon domain K06400 - - 0.00000006571 61.0
YYD2_k127_3895662_19 Resolvase - - - 0.0000006825 53.0
YYD2_k127_3895662_2 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 418.0
YYD2_k127_3895662_20 - - - - 0.00004157 53.0
YYD2_k127_3895662_3 PFAM ABC transporter related K01990,K09697 - 3.6.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 359.0
YYD2_k127_3895662_4 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003991 344.0
YYD2_k127_3895662_5 carboxylic acid catabolic process K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 313.0
YYD2_k127_3895662_6 ADP-ribosylation factor family K06883 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000514 279.0
YYD2_k127_3895662_7 Group 1 family - - - 0.000000000000000000000000000000000000000000000000000000000000006233 231.0
YYD2_k127_3895662_8 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000002047 223.0
YYD2_k127_3895662_9 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000004778 201.0
YYD2_k127_3906647_0 Domains REC, sigma54 interaction, HTH8 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005766 438.0
YYD2_k127_3906647_1 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 344.0
YYD2_k127_3906647_2 Transglycosylase SLT domain K08307,K12204 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 316.0
YYD2_k127_3906647_3 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000009979 196.0
YYD2_k127_3906647_4 PFAM ATP-binding region, ATPase domain protein K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000083 192.0
YYD2_k127_3906647_5 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000004721 159.0
YYD2_k127_3906647_7 Bacterial regulatory protein, Fis family K10943 - - 0.000001459 57.0
YYD2_k127_3906647_8 response regulator, receiver - - - 0.00002928 55.0
YYD2_k127_3924360_0 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 428.0
YYD2_k127_3924360_1 Dna alkylation repair - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005611 273.0
YYD2_k127_3924360_2 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000006631 257.0
YYD2_k127_3924360_3 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000002074 182.0
YYD2_k127_3924360_4 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000008043 169.0
YYD2_k127_3924360_5 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.000000000000000000000000007958 126.0
YYD2_k127_3945678_0 PFAM ABC transporter K06158 - - 4.691e-206 659.0
YYD2_k127_3945678_1 Leukotriene A4 hydrolase, C-terminal - - - 2.346e-194 630.0
YYD2_k127_3945678_10 choline monooxygenase K00499 - 1.14.15.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 337.0
YYD2_k127_3945678_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005974 292.0
YYD2_k127_3945678_12 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002825 279.0
YYD2_k127_3945678_13 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003247 271.0
YYD2_k127_3945678_14 ADP-ribosylglycohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002086 264.0
YYD2_k127_3945678_15 short chain dehydrogenase K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001091 263.0
YYD2_k127_3945678_16 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002109 260.0
YYD2_k127_3945678_17 copper resistance - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004545 260.0
YYD2_k127_3945678_18 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003723 244.0
YYD2_k127_3945678_19 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004507 269.0
YYD2_k127_3945678_2 DNA polymerase alpha chain like domain K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 578.0
YYD2_k127_3945678_20 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000004689 241.0
YYD2_k127_3945678_21 Protein of unknown function (DUF1214) - - - 0.000000000000000000000000000000000000000000000000000000000001977 221.0
YYD2_k127_3945678_22 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000007649 219.0
YYD2_k127_3945678_23 Linear amide C-N hydrolases, choloylglycine hydrolase family K01442 - 3.5.1.24 0.00000000000000000000000000000000000000000000000000000000001278 221.0
YYD2_k127_3945678_24 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000008259 218.0
YYD2_k127_3945678_25 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000000000000000000000000004858 193.0
YYD2_k127_3945678_26 Glycerophosphodiester phosphodiesterase family protein - - - 0.0000000000000000000000000000000000000000000000000001339 196.0
YYD2_k127_3945678_27 cellulose binding - - - 0.000000000000000000000000000000000000000000000000001523 206.0
YYD2_k127_3945678_28 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000005986 191.0
YYD2_k127_3945678_29 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000000000000000000000003168 179.0
YYD2_k127_3945678_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 536.0
YYD2_k127_3945678_30 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000003675 180.0
YYD2_k127_3945678_31 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000486 171.0
YYD2_k127_3945678_32 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000327 171.0
YYD2_k127_3945678_33 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000002629 160.0
YYD2_k127_3945678_34 mRNA catabolic process K06950,K09163 - - 0.0000000000000000000000000000000000000007963 156.0
YYD2_k127_3945678_35 Glycine cleavage T-protein C-terminal barrel domain K00605,K06980 - 2.1.2.10 0.00000000000000000000000000000000000002872 156.0
YYD2_k127_3945678_36 DinB family - - - 0.000000000000000000000000000000005286 134.0
YYD2_k127_3945678_37 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000444 130.0
YYD2_k127_3945678_38 cellulose binding K13735 - - 0.00000000000000000000000000003328 134.0
YYD2_k127_3945678_39 ECF sigma factor K03088 - - 0.00000000000000000000000000005948 123.0
YYD2_k127_3945678_4 Domain of unknown function (DUF5117) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 522.0
YYD2_k127_3945678_40 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000007141 126.0
YYD2_k127_3945678_41 Transcriptional regulator - - - 0.0000000000000000000000000001148 119.0
YYD2_k127_3945678_42 protein secretion K20276 - - 0.000000000000000000000007534 121.0
YYD2_k127_3945678_44 - - - - 0.000000000000000003481 92.0
YYD2_k127_3945678_45 lipolytic protein G-D-S-L family - - - 0.00000000000006796 85.0
YYD2_k127_3945678_46 Bacterial Ig-like domain - - - 0.00000000000007186 85.0
YYD2_k127_3945678_47 - - - - 0.0000000000002439 77.0
YYD2_k127_3945678_48 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000228 77.0
YYD2_k127_3945678_49 - - - - 0.000000001666 68.0
YYD2_k127_3945678_5 Cys/Met metabolism PLP-dependent enzyme K01739,K01760,K01761 - 2.5.1.48,4.4.1.11,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005199 501.0
YYD2_k127_3945678_50 metal-dependent membrane protease K07052 - - 0.0000009897 60.0
YYD2_k127_3945678_51 Matrixin - - - 0.000003222 63.0
YYD2_k127_3945678_52 amine dehydrogenase activity - - - 0.000009357 57.0
YYD2_k127_3945678_53 Psort location CytoplasmicMembrane, score - - - 0.0007293 49.0
YYD2_k127_3945678_6 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006207 423.0
YYD2_k127_3945678_7 TrkA-N domain K03316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 436.0
YYD2_k127_3945678_8 Bacterial protein of unknown function (DUF839) K07093 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 365.0
YYD2_k127_3945678_9 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 346.0
YYD2_k127_3961016_0 PD-(D/E)XK endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000001295 226.0
YYD2_k127_3961016_1 C-methyltransferase C-terminal domain K00568,K20444 - 2.1.1.222,2.1.1.64 0.00000000000000000000000214 104.0
YYD2_k127_3961016_2 extracellular matrix structural constituent - - - 0.000004765 56.0
YYD2_k127_3961016_3 COG3291 FOG PKD repeat - - - 0.00006436 56.0
YYD2_k127_3961016_4 Septum formation initiator - - - 0.0008562 43.0
YYD2_k127_3981322_0 cystathionine gamma-synthase activity K01739,K01758,K01760,K01761 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004121,GO:0004123,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48,4.4.1.1,4.4.1.11,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006256 470.0
YYD2_k127_3981322_1 Cystathionine beta-synthase K01697 GO:0003674,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008144,GO:0016020,GO:0019842,GO:0030170,GO:0030312,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0071944,GO:0097159,GO:1901363 4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 364.0
YYD2_k127_3981322_2 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744,K09774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006485 345.0
YYD2_k127_3981322_3 domain protein K13735 - - 0.0000000000000000000000000000000000000000000000000002021 213.0
YYD2_k127_3981322_4 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000001811 144.0
YYD2_k127_3981322_5 endonuclease activity K07451 - - 0.000000000000000000000000000001402 134.0
YYD2_k127_3981322_6 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000000000000003249 113.0
YYD2_k127_3981322_7 - - - - 0.00000000000000000000000008309 126.0
YYD2_k127_3981322_8 ROK family K00845 GO:0003674,GO:0003824,GO:0004340,GO:0004396,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019637,GO:0044237,GO:0044238,GO:0044262,GO:0044424,GO:0044464,GO:0046835,GO:0051156,GO:0071704,GO:1901135 2.7.1.2 0.0000001593 55.0
YYD2_k127_3981322_9 - - - - 0.0000003102 57.0
YYD2_k127_399106_0 LytB protein K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 476.0
YYD2_k127_399106_1 cytochrome C peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004511 301.0
YYD2_k127_399106_2 PFAM AhpC TSA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003269 262.0
YYD2_k127_399106_3 CBS domain - - - 0.00000000000000000000000000000000000000000001063 165.0
YYD2_k127_399106_4 Predicted integral membrane protein (DUF2269) - - - 0.000000000000000000003954 100.0
YYD2_k127_399106_5 - - - - 0.000000000000000009938 90.0
YYD2_k127_399106_6 - - - - 0.00000000000003577 83.0
YYD2_k127_399106_7 Domain of unknown function (DUF4440) - - - 0.0000003243 63.0
YYD2_k127_4009338_0 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637 404.0
YYD2_k127_4009338_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 369.0
YYD2_k127_4009338_10 - - - - 0.000000000000000000005451 100.0
YYD2_k127_4009338_11 Glycosyl hydrolase family 70 K01142,K01176 - 3.1.11.2,3.2.1.1 0.000000000000006216 88.0
YYD2_k127_4009338_12 PFAM Major Facilitator Superfamily - - - 0.00000000000005291 84.0
YYD2_k127_4009338_13 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.000000000004794 68.0
YYD2_k127_4009338_14 phosphorelay signal transduction system - - - 0.0000001841 60.0
YYD2_k127_4009338_15 TIGRFAM MJ0042 family finger-like protein - - - 0.0002443 51.0
YYD2_k127_4009338_2 pyrroloquinoline quinone binding K00117 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000776 323.0
YYD2_k127_4009338_3 ADP-ribosylation factor family K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.0000000000000000000000000000000000000000000000000000000000000000003708 245.0
YYD2_k127_4009338_4 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000002015 196.0
YYD2_k127_4009338_5 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17105 - 2.5.1.42 0.000000000000000000000000000000000002797 148.0
YYD2_k127_4009338_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000001268 138.0
YYD2_k127_4009338_7 phosphorelay signal transduction system K02488,K04757 - 2.7.11.1,2.7.7.65 0.0000000000000000000000283 110.0
YYD2_k127_4009338_8 Domain of unknown function (DUF4136) - - - 0.00000000000000000000005681 111.0
YYD2_k127_4009338_9 - - - - 0.0000000000000000000004311 111.0
YYD2_k127_4033482_0 SPTR Peptidase S8 and S53 subtilisin kexin sedolisin K01113,K14645,K17713 - 3.1.3.1 0.0000000000000000000000000000007582 142.0
YYD2_k127_4033482_1 Fibronectin type III domain protein - - - 0.0000002552 64.0
YYD2_k127_4048497_0 Angiotensin-converting enzyme K01283 - 3.4.15.1 6.168e-246 773.0
YYD2_k127_4048497_1 Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0070011,GO:0070012,GO:0071704,GO:0140096,GO:1901564 3.4.21.83 3.944e-226 735.0
YYD2_k127_4048497_10 PFAM Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000009853 273.0
YYD2_k127_4048497_11 Putative FMN-binding domain K07734 - - 0.000000000000000000000000000000000000000000000000001406 190.0
YYD2_k127_4048497_12 AMP-binding enzyme C-terminal domain K16029 - - 0.00000000000000000000000000000000000000000000000002259 198.0
YYD2_k127_4048497_13 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000158 178.0
YYD2_k127_4048497_14 DNA polymerase Ligase (LigD) - - - 0.00000000000000000000000000000000000000000000001835 174.0
YYD2_k127_4048497_15 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000004504 149.0
YYD2_k127_4048497_16 Bacterial transcription activator, effector binding domain K13652 - - 0.000000000000000000000000000008882 124.0
YYD2_k127_4048497_17 transferase activity, transferring acyl groups K03824,K15520 - 2.3.1.189 0.000000000000000000000000001566 128.0
YYD2_k127_4048497_18 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000001209 84.0
YYD2_k127_4048497_19 STAS domain K04749 - - 0.000000000000000472 83.0
YYD2_k127_4048497_2 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 497.0
YYD2_k127_4048497_20 Beta-lactamase superfamily domain - - - 0.00000000000004694 81.0
YYD2_k127_4048497_21 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.000000571 61.0
YYD2_k127_4048497_3 PA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002468 490.0
YYD2_k127_4048497_4 Threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008393 479.0
YYD2_k127_4048497_5 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 353.0
YYD2_k127_4048497_6 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family K18139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004509 322.0
YYD2_k127_4048497_7 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 301.0
YYD2_k127_4048497_8 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002233 267.0
YYD2_k127_4048497_9 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009036 266.0
YYD2_k127_4070169_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 321.0
YYD2_k127_4070169_1 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004713 333.0
YYD2_k127_4070169_2 glyoxalase III activity - - - 0.00000000000000000000000000000000000000000000000000000000000002335 218.0
YYD2_k127_4070169_3 PFAM Alpha beta hydrolase K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000128 184.0
YYD2_k127_4070169_4 - - - - 0.00000000000000000000000000000000000001352 151.0
YYD2_k127_4070169_5 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000141 151.0
YYD2_k127_4070169_6 regulation of RNA biosynthetic process - - - 0.000000000000000000000000000000000000407 145.0
YYD2_k127_4070169_7 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.00000000000006646 73.0
YYD2_k127_4070169_8 cellulose binding K00505 - 1.14.18.1 0.0000000000716 75.0
YYD2_k127_4070169_9 O-methyltransferase - - - 0.00002037 54.0
YYD2_k127_4074036_0 Acetyl-CoA hydrolase/transferase N-terminal domain K18118,K22214 GO:0003674,GO:0003824,GO:0003986,GO:0006082,GO:0006083,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0008410,GO:0008775,GO:0009987,GO:0016289,GO:0016740,GO:0016782,GO:0016787,GO:0016788,GO:0016790,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0043821,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0046459,GO:0071704 2.8.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005372 614.0
YYD2_k127_4074036_1 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 450.0
YYD2_k127_4074036_10 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009934 250.0
YYD2_k127_4074036_11 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000002266 232.0
YYD2_k127_4074036_12 glyoxalase K07032 - - 0.0000000000000000000000000000000000000000000000000000000000000000246 226.0
YYD2_k127_4074036_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001442 227.0
YYD2_k127_4074036_14 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000001305 222.0
YYD2_k127_4074036_15 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000000000000000000000887 209.0
YYD2_k127_4074036_16 Prolyl oligopeptidase family - - - 0.0000000000000000000000000000000000000000000000000000000003958 214.0
YYD2_k127_4074036_17 MaoC like domain - - - 0.000000000000000000000000000000000000000000000000000000008394 201.0
YYD2_k127_4074036_18 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000001011 201.0
YYD2_k127_4074036_19 SMART Integrin alpha beta-propellor repeat protein - - - 0.000000000000000000000000000000000000000000000000000004677 216.0
YYD2_k127_4074036_2 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 420.0
YYD2_k127_4074036_20 Serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000006245 215.0
YYD2_k127_4074036_21 Cupin superfamily (DUF985) - - - 0.000000000000000000000000000000000000000000000000001235 187.0
YYD2_k127_4074036_22 Domain of unknown function (DUF4034) - - - 0.00000000000000000000000000000000000000000000000004721 191.0
YYD2_k127_4074036_23 methyltransferase - - - 0.00000000000000000000000000000000000000000000001104 186.0
YYD2_k127_4074036_24 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000141 185.0
YYD2_k127_4074036_25 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000003008 166.0
YYD2_k127_4074036_26 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000003524 171.0
YYD2_k127_4074036_27 Low affinity iron permease - - - 0.000000000000000000000000000000000000000004072 158.0
YYD2_k127_4074036_28 acetyltransferase K03827 - - 0.00000000000000000000000000000000000000001083 168.0
YYD2_k127_4074036_29 Protein of unknown function (DUF1428) - - - 0.00000000000000000000000000000000000000008806 154.0
YYD2_k127_4074036_3 Acetohydroxy acid isomeroreductase, NADPH-binding domain K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 362.0
YYD2_k127_4074036_30 PFAM CoA-binding domain protein K06929 - - 0.0000000000000000000000000000000000000001871 156.0
YYD2_k127_4074036_31 SnoaL-like domain - - - 0.00000000000000000000000000000004263 139.0
YYD2_k127_4074036_32 Protein of unknown function (DUF2721) - - - 0.00000000000000000000000000000004896 140.0
YYD2_k127_4074036_33 - - - - 0.00000000000000000000000000001241 130.0
YYD2_k127_4074036_34 Ribosomal subunit interface protein - - - 0.00000000000000000000000008047 109.0
YYD2_k127_4074036_35 Domain of unknown function (DU1801) - - - 0.000000000000000000002216 105.0
YYD2_k127_4074036_36 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000006068 88.0
YYD2_k127_4074036_38 - - - - 0.000000000000006421 78.0
YYD2_k127_4074036_39 - - - - 0.000000000002566 67.0
YYD2_k127_4074036_4 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003688 351.0
YYD2_k127_4074036_40 Sigma-70, region 4 K03088 - - 0.000000000006597 73.0
YYD2_k127_4074036_41 response to hydrogen peroxide - - - 0.00000000001213 71.0
YYD2_k127_4074036_42 Chagasin family peptidase inhibitor I42 K14475 - - 0.000000000347 66.0
YYD2_k127_4074036_43 - - - - 0.0000000005757 72.0
YYD2_k127_4074036_44 Membrane-bound lysozyme-inhibitor of c-type lysozyme - - - 0.0000002728 63.0
YYD2_k127_4074036_45 - - - - 0.00000233 58.0
YYD2_k127_4074036_46 EamA-like transporter family K15268 - - 0.0004132 44.0
YYD2_k127_4074036_5 Formate/nitrite transporter K06212,K21993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006344 350.0
YYD2_k127_4074036_6 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 293.0
YYD2_k127_4074036_7 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 287.0
YYD2_k127_4074036_8 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001796 258.0
YYD2_k127_4074036_9 beta-lactamase K01286 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000004229 267.0
YYD2_k127_4109598_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 4.864e-234 741.0
YYD2_k127_4109598_1 PFAM isocitrate isopropylmalate dehydrogenase K00030,K07246 - 1.1.1.41,1.1.1.83,1.1.1.93,4.1.1.73 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 361.0
YYD2_k127_4109598_2 PFAM Na-Ca exchanger integrin-beta4 peptidase-like FG-GAP K20276 - - 0.00000000000000000000000000000000000000002014 173.0
YYD2_k127_4109598_3 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000005543 157.0
YYD2_k127_4109598_4 LytB protein K03527 - 1.17.7.4 0.00000000000000000000649 94.0
YYD2_k127_4109598_5 peptidase activity, acting on L-amino acid peptides K07752 - 3.4.17.22 0.0000000000000001564 94.0
YYD2_k127_4123656_0 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003462 418.0
YYD2_k127_4158824_0 DNA polymerase Ligase (LigD) - - - 7.639e-249 784.0
YYD2_k127_4158824_1 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000006935 179.0
YYD2_k127_4160755_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 550.0
YYD2_k127_4160755_1 glucose sorbosone K00117 - 1.1.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008255 273.0
YYD2_k127_4172983_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1062.0
YYD2_k127_4172983_1 Glutamate synthase, NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 1.006e-229 723.0
YYD2_k127_4172983_2 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 492.0
YYD2_k127_4187075_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 1.571e-296 933.0
YYD2_k127_4187075_1 Elongation factor G C-terminus K06207 GO:0000027,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006996,GO:0008150,GO:0009266,GO:0009408,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071826,GO:0071840 - 4.087e-296 920.0
YYD2_k127_4187075_10 glucosamine-1-phosphate N-acetyltransferase activity K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002576 286.0
YYD2_k127_4187075_11 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000008319 248.0
YYD2_k127_4187075_12 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000008972 246.0
YYD2_k127_4187075_13 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000000000000000000000000005429 209.0
YYD2_k127_4187075_14 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000007859 211.0
YYD2_k127_4187075_15 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000002737 186.0
YYD2_k127_4187075_16 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000007247 196.0
YYD2_k127_4187075_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000001608 157.0
YYD2_k127_4187075_18 iron-sulfur cluster assembly K07400 - - 0.0000000000000000000000000000000000000005308 159.0
YYD2_k127_4187075_19 GGDEF domain - - - 0.0000000000000000000000000000000000000007591 168.0
YYD2_k127_4187075_2 Electron transfer flavoprotein-ubiquinone K00311 - 1.5.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 580.0
YYD2_k127_4187075_20 HAD superfamily (subfamily IG) hydrolase 5'-Nucleotidase - - - 0.00000000000000000000000000000000000004571 158.0
YYD2_k127_4187075_21 PFAM BioY family K03523 - - 0.0000000000000000000000000000000004892 138.0
YYD2_k127_4187075_22 - - - - 0.000000000000000000000000000000009958 132.0
YYD2_k127_4187075_23 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.0000000000000000000000000004135 117.0
YYD2_k127_4187075_24 - - - - 0.00000000000000000000002165 107.0
YYD2_k127_4187075_25 - - - - 0.000000000000000000001534 102.0
YYD2_k127_4187075_26 peptidyl-tyrosine sulfation - - - 0.0000000000000000002073 104.0
YYD2_k127_4187075_27 LVIVD repeat K01179 - 3.2.1.4 0.000000000000001203 92.0
YYD2_k127_4187075_28 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0030312,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.00000000000001462 85.0
YYD2_k127_4187075_29 Copper binding proteins, plastocyanin/azurin family - - - 0.00000000002012 69.0
YYD2_k127_4187075_3 FAD linked oxidases, C-terminal domain K00104,K18930 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 524.0
YYD2_k127_4187075_31 Uncharacterized conserved protein (DUF2203) - - - 0.0000003519 59.0
YYD2_k127_4187075_32 Heparinase II/III-like protein - - - 0.0000009062 63.0
YYD2_k127_4187075_33 COG1520 FOG WD40-like repeat - - - 0.0002301 52.0
YYD2_k127_4187075_4 Aldo/keto reductase family - GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0009987,GO:0015672,GO:0030001,GO:0034220,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 388.0
YYD2_k127_4187075_5 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 380.0
YYD2_k127_4187075_6 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 389.0
YYD2_k127_4187075_7 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 405.0
YYD2_k127_4187075_8 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 339.0
YYD2_k127_4187075_9 ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000632 343.0
YYD2_k127_4189109_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1133.0
YYD2_k127_4189109_1 Transporter K03305 - - 8.168e-260 807.0
YYD2_k127_4189109_10 Belongs to the glycosyl hydrolase 18 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005222 320.0
YYD2_k127_4189109_11 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006927 308.0
YYD2_k127_4189109_12 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000004156 278.0
YYD2_k127_4189109_13 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001243 246.0
YYD2_k127_4189109_14 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009879 242.0
YYD2_k127_4189109_15 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000001589 240.0
YYD2_k127_4189109_16 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000004606 219.0
YYD2_k127_4189109_17 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000005214 203.0
YYD2_k127_4189109_18 - - - - 0.000000000000000000000000000000000000000000000000002796 203.0
YYD2_k127_4189109_19 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000000000000000000000000000001605 191.0
YYD2_k127_4189109_2 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 2.856e-254 800.0
YYD2_k127_4189109_20 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000001841 186.0
YYD2_k127_4189109_21 PFAM Haloacid dehalogenase domain protein hydrolase - - - 0.000000000000000000000000000000000000000000008469 181.0
YYD2_k127_4189109_22 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) K02823 - - 0.0000000000000000000000000000000000000004869 160.0
YYD2_k127_4189109_23 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000003243 136.0
YYD2_k127_4189109_24 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000002521 121.0
YYD2_k127_4189109_25 Transcription factor zinc-finger K09981 - - 0.000000000000000000000001029 108.0
YYD2_k127_4189109_26 Methyltransferase domain - - - 0.0000000000000000000002488 107.0
YYD2_k127_4189109_27 Protein of unknown function (DUF2892) - - - 0.00000000000000000005114 91.0
YYD2_k127_4189109_28 guanyl-nucleotide exchange factor activity - - - 0.000000000000000001152 96.0
YYD2_k127_4189109_29 Tetratricopeptide repeat - - - 0.00000000000000007182 95.0
YYD2_k127_4189109_3 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 2.287e-233 733.0
YYD2_k127_4189109_30 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.000000000000003817 89.0
YYD2_k127_4189109_31 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00000000001843 69.0
YYD2_k127_4189109_32 - - - - 0.00000000002907 71.0
YYD2_k127_4189109_33 Bacterial protein of unknown function (DUF883) - - - 0.00000000007374 69.0
YYD2_k127_4189109_34 COG NOG19114 non supervised orthologous group - - - 0.000005493 53.0
YYD2_k127_4189109_4 Formiminotransferase-cyclodeaminase K00603,K13990 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005388 605.0
YYD2_k127_4189109_5 Polysaccharide biosynthesis protein K01711,K15856 - 1.1.1.281,4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 425.0
YYD2_k127_4189109_6 metalloendopeptidase activity K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009295 413.0
YYD2_k127_4189109_7 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 410.0
YYD2_k127_4189109_8 Belongs to the ATCase OTCase family K00608,K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 394.0
YYD2_k127_4189109_9 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000485 387.0
YYD2_k127_4198867_0 Required for chromosome condensation and partitioning K03529,K19171 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000313 256.0
YYD2_k127_4198867_1 peptidoglycan binding - - - 0.0005438 52.0
YYD2_k127_4201558_0 glutamine synthetase K01915 - 6.3.1.2 1.668e-228 717.0
YYD2_k127_4201558_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006792 401.0
YYD2_k127_4201558_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000436 338.0
YYD2_k127_4201558_3 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000111 299.0
YYD2_k127_4201558_4 short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000558 112.0
YYD2_k127_4201558_5 cellulose binding - - - 0.0000000000000000000000007456 112.0
YYD2_k127_4231271_0 Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007218 369.0
YYD2_k127_4231271_1 LVIVD repeat - - - 0.0000000000000000000000000000000000000000000001891 178.0
YYD2_k127_4231271_2 bacterial-type flagellum-dependent cell motility K01119,K06113,K12685,K20276 - 3.1.3.6,3.1.4.16,3.2.1.99 0.0000000000002911 72.0
YYD2_k127_4231271_3 guanyl-nucleotide exchange factor activity - - - 0.00000000007996 74.0
YYD2_k127_4236136_0 3-beta hydroxysteroid dehydrogenase/isomerase family K08678 - 4.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 387.0
YYD2_k127_4236136_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00000000000000000000000000001646 121.0
YYD2_k127_426716_0 PFAM Nucleotidyl transferase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 303.0
YYD2_k127_426716_1 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 298.0
YYD2_k127_426716_10 protein trimerization - - - 0.000002809 60.0
YYD2_k127_426716_11 N-acetylmuramoyl-L-alanine amidase K01448 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.5.1.28 0.000578 53.0
YYD2_k127_426716_2 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000007351 135.0
YYD2_k127_426716_3 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000004592 131.0
YYD2_k127_426716_4 Cell Wall K01448 - 3.5.1.28 0.00000000000000000000000002321 126.0
YYD2_k127_426716_5 Receptor family ligand binding region K01999 - - 0.00000000000000000000003638 116.0
YYD2_k127_426716_6 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000006045 94.0
YYD2_k127_426716_7 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000001515 94.0
YYD2_k127_426716_8 peptidylprolyl isomerase K03769,K07533 - 5.2.1.8 0.00000000000000007079 94.0
YYD2_k127_426716_9 TIGRFAM TonB family protein K03832 - - 0.0000000005762 70.0
YYD2_k127_4273686_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 1.829e-200 657.0
YYD2_k127_4273686_1 recombinase activity - - - 0.0000000000000000000000127 111.0
YYD2_k127_4283280_0 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000003665 232.0
YYD2_k127_4283280_1 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.0000000000000000000000000000000000000000000000000003174 197.0
YYD2_k127_4283280_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 GO:0001510,GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0003824,GO:0004808,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016782,GO:0016783,GO:0030488,GO:0032259,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.8.1.13 0.0000000000000000000000000000000000002474 147.0
YYD2_k127_4283280_3 peptidyl-tyrosine sulfation - - - 0.00000000000000008596 91.0
YYD2_k127_429868_0 Amidinotransferase K01482 - 3.5.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000004454 269.0
YYD2_k127_429868_1 PFAM Collagen-binding surface protein Cna-like, B-type domain - - - 0.000000000000000000000000000000000002422 157.0
YYD2_k127_4316311_0 PFAM DAHP synthetase I KDSA K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 428.0
YYD2_k127_4316311_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 350.0
YYD2_k127_4316311_2 Protein of unknown function (DUF3641) - - - 0.000000000000000000000000000000000000000000000000000000000000002187 237.0
YYD2_k127_4316311_3 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000000000000000000055 184.0
YYD2_k127_4316311_4 N-6 DNA Methylase - - - 0.000000000000000807 79.0
YYD2_k127_4321253_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 585.0
YYD2_k127_4321253_1 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000001739 198.0
YYD2_k127_4321253_2 NADH:flavin oxidoreductase / NADH oxidase family K00219 - 1.3.1.34 0.00000000000000000000000006052 109.0
YYD2_k127_4321253_3 PFAM Surface antigen variable number repeat K07277 - - 0.0000000000000002012 92.0
YYD2_k127_4321253_4 Putative adhesin - - - 0.000000000000001858 88.0
YYD2_k127_4321253_5 Polymer-forming cytoskeletal - - - 0.00001036 57.0
YYD2_k127_4321253_6 Putative zinc-finger - - - 0.00008313 52.0
YYD2_k127_4325854_0 Amidinotransferase K01478 - 3.5.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 509.0
YYD2_k127_4325854_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 497.0
YYD2_k127_4325854_10 ABC-2 type transporter K01992 - - 0.000213 54.0
YYD2_k127_4325854_11 lipolytic protein G-D-S-L family - - - 0.0004343 52.0
YYD2_k127_4325854_12 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.0006667 44.0
YYD2_k127_4325854_2 Belongs to the carbamate kinase family K00926 - 2.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 390.0
YYD2_k127_4325854_3 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006997 256.0
YYD2_k127_4325854_4 RNA pseudouridylate synthase K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000002396 212.0
YYD2_k127_4325854_5 endonuclease III K01247 - 3.2.2.21 0.000000000000000000000000000000002942 132.0
YYD2_k127_4325854_6 Domain of unknown function (DUF4136) - - - 0.0000000000000000000000000219 123.0
YYD2_k127_4325854_7 - - - - 0.0000000000000000000005124 101.0
YYD2_k127_4325854_8 ABC-type multidrug transport system, permease component K01992 - - 0.0000000000004578 83.0
YYD2_k127_4325854_9 ABC-2 type transporter K01992 - - 0.0000000007959 72.0
YYD2_k127_4337009_0 Peptidase S9, prolyl oligopeptidase active site domain protein K01322 - 3.4.21.26 1.809e-267 846.0
YYD2_k127_4337009_1 synthetase (ADP forming), alpha K01905,K09181,K22224 - 6.2.1.13 1.679e-195 639.0
YYD2_k127_4337009_10 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000004334 270.0
YYD2_k127_4337009_11 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003825 253.0
YYD2_k127_4337009_12 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000003025 222.0
YYD2_k127_4337009_13 methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000008578 187.0
YYD2_k127_4337009_14 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000002499 186.0
YYD2_k127_4337009_15 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000001101 173.0
YYD2_k127_4337009_16 translation initiation factor activity K06996 - - 0.0000000000000000000000000000000005567 136.0
YYD2_k127_4337009_17 Cupin domain K11312 - - 0.0000000000000000000000000000001741 129.0
YYD2_k127_4337009_18 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.0000000000000000000000000000005353 130.0
YYD2_k127_4337009_19 low molecular weight K03741 - 1.20.4.1 0.0000000000000000000000000691 112.0
YYD2_k127_4337009_2 glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005348 477.0
YYD2_k127_4337009_20 HNH nucleases - - - 0.0000000000000000000461 94.0
YYD2_k127_4337009_21 ThiS family K03154 - - 0.000000000003659 68.0
YYD2_k127_4337009_22 allantoin biosynthetic process - - - 0.0001692 53.0
YYD2_k127_4337009_23 - - - - 0.000224 53.0
YYD2_k127_4337009_3 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005501 436.0
YYD2_k127_4337009_4 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 389.0
YYD2_k127_4337009_5 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 385.0
YYD2_k127_4337009_6 pyrroloquinoline quinone binding K00117 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000679 352.0
YYD2_k127_4337009_7 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 322.0
YYD2_k127_4337009_8 Peptidase, M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003818 324.0
YYD2_k127_4337009_9 Peptidase M16 inactive domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001217 310.0
YYD2_k127_4340121_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003508 287.0
YYD2_k127_4340121_1 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000002564 232.0
YYD2_k127_4340121_2 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000008347 188.0
YYD2_k127_4340121_3 Thioredoxin K12057 - - 0.00000000000000000002477 100.0
YYD2_k127_4340121_4 Putative prokaryotic signal transducing protein - - - 0.0000000000000000001387 93.0
YYD2_k127_4340121_5 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000006742 84.0
YYD2_k127_4340121_6 - - - - 0.0005863 49.0
YYD2_k127_4345769_0 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 542.0
YYD2_k127_4345769_1 Uncharacterized conserved protein (DUF2075) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 350.0
YYD2_k127_4345769_2 ROK family K00845,K13967,K19979,K20433 - 2.7.1.188,2.7.1.2,2.7.1.214,2.7.1.60,5.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009715 347.0
YYD2_k127_4345769_3 Large extracellular alpha-helical protein K09607 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005253 357.0
YYD2_k127_4345769_4 lipolytic protein G-D-S-L family K00612 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001286 270.0
YYD2_k127_4345769_5 Metallo-peptidase family M12B Reprolysin-like - - - 0.000000000000000000000000008975 129.0
YYD2_k127_4345769_6 calcium- and calmodulin-responsive adenylate cyclase activity K01179 - 3.2.1.4 0.0000000000001032 86.0
YYD2_k127_4345769_7 - - - - 0.0000000003092 62.0
YYD2_k127_4345769_8 - - - - 0.0000001081 63.0
YYD2_k127_4353365_0 Sulfate permease family K01673,K03321 - 4.2.1.1 9.939e-209 662.0
YYD2_k127_4353365_1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and K03182 - 4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 595.0
YYD2_k127_4353365_10 - - - - 0.0000000000000000000000000000000000000000000000000000001479 209.0
YYD2_k127_4353365_11 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008694,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.5.1.129 0.0000000000000000000000000000000000000000000000000000007006 200.0
YYD2_k127_4353365_12 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000000000000435 181.0
YYD2_k127_4353365_13 COG0346 Lactoylglutathione lyase and related lyases - - - 0.00000000000000000000000000000000000000000000000396 175.0
YYD2_k127_4353365_14 MgtC family K07507 GO:0008150,GO:0009405,GO:0044419,GO:0051704 - 0.00000000000000000000000000000000000001506 149.0
YYD2_k127_4353365_15 protein conserved in bacteria - - - 0.00000000000000000000000000000000000915 143.0
YYD2_k127_4353365_16 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.00000000000000000000000000000000319 139.0
YYD2_k127_4353365_17 Parallel beta-helix repeats - - - 0.00000000000000000000000000000658 130.0
YYD2_k127_4353365_18 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.000000000000000000000002018 108.0
YYD2_k127_4353365_19 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000008239 104.0
YYD2_k127_4353365_2 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003901 370.0
YYD2_k127_4353365_20 Protein involved in outer membrane biogenesis - - - 0.000000000000000000002892 103.0
YYD2_k127_4353365_21 Glycosyl transferase 4-like domain - - - 0.00000000000000000001499 107.0
YYD2_k127_4353365_22 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.00000000000000000002043 104.0
YYD2_k127_4353365_23 - - - - 0.0000000000000000001784 96.0
YYD2_k127_4353365_24 Sugar-specific transcriptional regulator TrmB - - - 0.0000000000000004646 88.0
YYD2_k127_4353365_25 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000005961 62.0
YYD2_k127_4353365_26 membrane - - - 0.00001367 58.0
YYD2_k127_4353365_3 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 321.0
YYD2_k127_4353365_4 Belongs to the peptidase S51 family K05995 - 3.4.13.21 0.000000000000000000000000000000000000000000000000000000000000000000000009112 252.0
YYD2_k127_4353365_5 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000002599 244.0
YYD2_k127_4353365_6 phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000007842 225.0
YYD2_k127_4353365_7 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000001762 219.0
YYD2_k127_4353365_8 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000001915 225.0
YYD2_k127_4353365_9 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000008646 208.0
YYD2_k127_437630_0 Binding-protein-dependent transport system inner membrane component K02037,K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 625.0
YYD2_k127_437630_1 inorganic phosphate transmembrane transporter activity K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 617.0
YYD2_k127_437630_2 phosphate ion binding K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003559 451.0
YYD2_k127_437630_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 429.0
YYD2_k127_437630_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009722 366.0
YYD2_k127_437630_5 PFAM response regulator receiver K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000225 263.0
YYD2_k127_437630_6 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000000000000000000000000000000000000000001891 231.0
YYD2_k127_437630_7 PhoU domain K02039 - - 0.000000000000000000000000000000000000000000000000000009597 203.0
YYD2_k127_437630_8 hydrolase activity, hydrolyzing O-glycosyl compounds K01337 - 3.4.21.50 0.00006125 48.0
YYD2_k127_4394973_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 2.102e-221 715.0
YYD2_k127_4394973_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 481.0
YYD2_k127_4394973_2 Belongs to the CinA family K03742 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000003738 261.0
YYD2_k127_4394973_3 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000007111 96.0
YYD2_k127_4394973_4 Modulates RecA activity K03565 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000005032 83.0
YYD2_k127_4394973_5 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000004463 76.0
YYD2_k127_4394973_7 - - - - 0.00000007581 64.0
YYD2_k127_4427421_0 Belongs to the ATP-dependent AMP-binding enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007896 417.0
YYD2_k127_4427421_1 lipolytic protein G-D-S-L family K20306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001361 284.0
YYD2_k127_4427421_2 Domain of unknown function (DUF4918) - - - 0.0000000000000000000000000000000000000000000000000000000000000009539 226.0
YYD2_k127_4427421_3 PFAM aldo keto reductase - - - 0.000000000000000000000000000000000000002135 153.0
YYD2_k127_4427421_4 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000002731 128.0
YYD2_k127_4427421_5 Glycosyl transferase, family 2 - - - 0.000000000000000000615 100.0
YYD2_k127_4427421_6 Phosphopantetheine attachment site - - - 0.0003329 49.0
YYD2_k127_4449118_0 FlgD Ig-like domain K21449 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 522.0
YYD2_k127_4449118_1 phosphatase K01083,K07004 - 3.1.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000913 388.0
YYD2_k127_4449118_2 Tfp pilus assembly protein, pilus retraction ATPase PilT K02669 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 372.0
YYD2_k127_4449118_3 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.000000000000000000000000004228 119.0
YYD2_k127_4449118_4 mercury ion transmembrane transporter activity - - - 0.000000000000001621 81.0
YYD2_k127_4449118_5 Domain of unknown function (DUF1508) - - - 0.00000002337 61.0
YYD2_k127_4464298_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007422 347.0
YYD2_k127_4464298_1 PFAM oxidoreductase FAD NAD(P)-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 291.0
YYD2_k127_4464298_2 FAD linked oxidases, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007673 271.0
YYD2_k127_4464298_3 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000003164 217.0
YYD2_k127_4464298_4 PFAM Pyruvate K00177 - 1.2.7.3 0.0000000000000000000000000000000000000000000001434 181.0
YYD2_k127_4464298_5 4Fe-4S single cluster domain K05337 - - 0.00000004516 64.0
YYD2_k127_4473162_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.593e-227 727.0
YYD2_k127_4473162_1 Ribosomal protein S1 K02945,K03527,K12132 GO:0005575,GO:0005576,GO:0018995,GO:0020003,GO:0030430,GO:0033643,GO:0033646,GO:0033655,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0065010 1.17.7.4,2.7.11.1 1.906e-212 676.0
YYD2_k127_4473162_10 Belongs to the pseudouridine synthase RsuA family K06178,K06182 - 5.4.99.21,5.4.99.22 0.0000000000000000000000000000000000000000000000000000002669 203.0
YYD2_k127_4473162_11 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000000002273 195.0
YYD2_k127_4473162_12 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000008096 165.0
YYD2_k127_4473162_13 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000000000002244 166.0
YYD2_k127_4473162_14 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0000000000000000000000000000003497 130.0
YYD2_k127_4473162_15 TIGRFAM 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000002702 115.0
YYD2_k127_4473162_16 HNH nucleases - - - 0.0000000000000000000001411 109.0
YYD2_k127_4473162_17 Bacterial Ig-like domain K07156 - - 0.0000000000000005245 91.0
YYD2_k127_4473162_18 Binds directly to 16S ribosomal RNA K02968 - - 0.00000005767 57.0
YYD2_k127_4473162_19 Belongs to the Smg family K03747 - - 0.0000005488 59.0
YYD2_k127_4473162_2 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 576.0
YYD2_k127_4473162_3 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 497.0
YYD2_k127_4473162_4 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 409.0
YYD2_k127_4473162_5 Tryptophanyl-tRNA synthetase K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 389.0
YYD2_k127_4473162_6 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000824 293.0
YYD2_k127_4473162_7 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002296 288.0
YYD2_k127_4473162_8 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000277 224.0
YYD2_k127_4473162_9 tyrosine recombinase XerC K03733 - - 0.00000000000000000000000000000000000000000000000000000002194 209.0
YYD2_k127_449522_0 Large extracellular alpha-helical protein K06894 - - 0.000000000000000000000000000000000000000000000000000003701 217.0
YYD2_k127_4534921_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000866 327.0
YYD2_k127_4534921_1 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000001436 197.0
YYD2_k127_4534921_2 MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000007587 106.0
YYD2_k127_4534921_3 PFAM Uncharacterised protein family (UPF0164) - - - 0.00000000000002333 85.0
YYD2_k127_4534921_4 Tetratricopeptide repeat - - - 0.0000000002289 75.0
YYD2_k127_4534921_5 ompA family - - - 0.00000001389 67.0
YYD2_k127_4534921_6 NHL repeat containing 3 - GO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0006810,GO:0006887,GO:0006955,GO:0008150,GO:0009987,GO:0012505,GO:0016192,GO:0030141,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032940,GO:0034774,GO:0035578,GO:0036230,GO:0042119,GO:0042582,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0044422,GO:0044424,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0060205,GO:0070013,GO:0097708,GO:0099503 - 0.00000002774 66.0
YYD2_k127_4534921_7 belongs to the glycosyl hydrolase 13 family - - - 0.0001183 56.0
YYD2_k127_4567521_0 domain, Protein - - - 0.000000000000000000002705 109.0
YYD2_k127_4567521_1 Polyphosphate kinase 2 (PPK2) - - - 0.000000000001212 68.0
YYD2_k127_4567521_2 COG0346 Lactoylglutathione lyase and related lyases K15975 - - 0.000003578 49.0
YYD2_k127_4607888_0 FeS assembly protein SufB K07033,K09014 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0008150,GO:0008152,GO:0009536,GO:0009842,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0071840 - 9.619e-250 779.0
YYD2_k127_4607888_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 557.0
YYD2_k127_4607888_2 FeS assembly ATPase SufC K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 355.0
YYD2_k127_4607888_3 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007143 358.0
YYD2_k127_4607888_4 TIGRFAM SUF system FeS assembly protein, NifU family K04488 - - 0.0000000000000000000000000000000000000000000000000003071 188.0
YYD2_k127_4607888_5 Disulphide isomerase - - - 0.00000000000000000000000000000000000000000000000001293 183.0
YYD2_k127_4607888_6 - - - - 0.0000000000000000000000000000000004468 137.0
YYD2_k127_4607888_7 metal-sulfur cluster biosynthetic enzyme K02612 - - 0.0000000000000000000000000000000007235 134.0
YYD2_k127_4616289_0 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 520.0
YYD2_k127_4616289_1 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391 366.0
YYD2_k127_4616289_2 COG NOG06100 non supervised orthologous group - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007849 293.0
YYD2_k127_4616289_3 PFAM MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000001905 154.0
YYD2_k127_4616289_4 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000000000001081 143.0
YYD2_k127_4616289_5 Protein of unknown function (DUF3450) - - - 0.000000000000000000000000000000000003079 149.0
YYD2_k127_4616289_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000001434 149.0
YYD2_k127_4616289_7 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000009625 97.0
YYD2_k127_4623141_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family K13687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008926 281.0
YYD2_k127_4623141_1 serine protease - - - 0.0000000000000000000000000000000000000000000000000000001175 201.0
YYD2_k127_4623141_2 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000008969 201.0
YYD2_k127_4623141_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000074 136.0
YYD2_k127_4623141_4 Metallo-peptidase family M12B Reprolysin-like - - - 0.00000000000000000000000000003579 134.0
YYD2_k127_4623141_5 Dodecin K09165 - - 0.00000000000000000000906 93.0
YYD2_k127_4623141_6 PKD domain K07282 - - 0.00000000000000002422 96.0
YYD2_k127_4627536_0 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005401 269.0
YYD2_k127_4627536_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.0000000000000000000000000000000000000000000000000003538 196.0
YYD2_k127_4627536_2 Glycosyl transferase WecB/TagA/CpsF family - - - 0.00000000000000000000000000000000254 140.0
YYD2_k127_4627536_3 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.00000000109 70.0
YYD2_k127_4627536_4 Tetratricopeptide repeat - - - 0.0000413 53.0
YYD2_k127_4627536_5 Fibronectin type 3 domain-containing protein K06882 - - 0.00008852 54.0
YYD2_k127_4629428_0 AMP-binding enzyme K01895 - 6.2.1.1 1.447e-237 763.0
YYD2_k127_4629428_1 cellulose binding - - - 3.22e-223 724.0
YYD2_k127_4629428_10 - - - - 0.00000000000000007448 80.0
YYD2_k127_4629428_11 Belongs to the peptidase S8 family - - - 0.000002454 60.0
YYD2_k127_4629428_2 Protein of unknown function (DUF2569) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004371 443.0
YYD2_k127_4629428_3 PFAM aminotransferase class V - GO:0001505,GO:0003674,GO:0003824,GO:0004760,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006082,GO:0006520,GO:0006544,GO:0006545,GO:0006807,GO:0008150,GO:0008152,GO:0008453,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0019265,GO:0019752,GO:0042133,GO:0042136,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 333.0
YYD2_k127_4629428_4 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 317.0
YYD2_k127_4629428_5 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000001372 168.0
YYD2_k127_4629428_6 Domain of unknown function (DUF5122) beta-propeller - - - 0.000000000000000000000000000000000001837 156.0
YYD2_k127_4629428_7 Protein of unknown function (DUF3307) - - - 0.00000000000000000000000000000164 136.0
YYD2_k127_4629428_8 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000009086 115.0
YYD2_k127_4629428_9 - - - - 0.00000000000000002551 87.0
YYD2_k127_4665636_0 4Fe-4S binding domain - - - 4.04e-259 818.0
YYD2_k127_4665636_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006317 507.0
YYD2_k127_4665636_10 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000002361 129.0
YYD2_k127_4665636_11 glycosyl transferase - - - 0.0000000000000000000000000003564 119.0
YYD2_k127_4665636_12 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000003454 98.0
YYD2_k127_4665636_13 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.000000000000000152 92.0
YYD2_k127_4665636_14 Membrane - - - 0.0000000009634 69.0
YYD2_k127_4665636_2 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 438.0
YYD2_k127_4665636_3 Peptidase family M20/M25/M40 K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000754 434.0
YYD2_k127_4665636_4 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 334.0
YYD2_k127_4665636_5 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01658,K01664 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000002911 245.0
YYD2_k127_4665636_6 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.000000000000000000000000000000000000000000000000000002135 201.0
YYD2_k127_4665636_7 Iron-storage protein K02217 - 1.16.3.2 0.00000000000000000000000000000000000000000527 160.0
YYD2_k127_4665636_8 Heparinase II/III N-terminus - - - 0.000000000000000000000000000000000000000009938 175.0
YYD2_k127_4665636_9 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000004133 142.0
YYD2_k127_4671538_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008363 568.0
YYD2_k127_4671538_1 PFAM Histone deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009326 316.0
YYD2_k127_4671538_2 Haloacid dehalogenase-like hydrolase - - - 0.00000000129 59.0
YYD2_k127_4672313_0 Belongs to the thiolase family K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008372 484.0
YYD2_k127_4672313_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 365.0
YYD2_k127_4672313_2 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 334.0
YYD2_k127_4672313_3 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049 323.0
YYD2_k127_4672313_4 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000007212 230.0
YYD2_k127_4672313_5 acid phosphatase activity - - - 0.000000000000001804 85.0
YYD2_k127_4672313_6 cellulose binding K00505 - 1.14.18.1 0.00000000005511 76.0
YYD2_k127_4672313_7 Damage-inducible protein DinB - - - 0.000000009807 65.0
YYD2_k127_4672313_8 acid phosphatase activity - - - 0.00004703 54.0
YYD2_k127_4672331_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000003258 266.0
YYD2_k127_4672331_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000006312 211.0
YYD2_k127_4672331_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000009127 203.0
YYD2_k127_4672331_3 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02841,K02843,K12982 - - 0.00000000000000000000000000000000000001896 159.0
YYD2_k127_4672331_4 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.00000000000000000000000000004621 122.0
YYD2_k127_4672331_5 cold-shock protein K03704 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000001889 92.0
YYD2_k127_4672331_6 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000008116 101.0
YYD2_k127_4672331_7 C4-type zinc ribbon domain K07164 - - 0.000002251 55.0
YYD2_k127_4679002_0 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 523.0
YYD2_k127_4679002_1 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006467 477.0
YYD2_k127_4679002_10 Translation elongation factor K03833 - - 0.000000000005994 69.0
YYD2_k127_4679002_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 361.0
YYD2_k127_4679002_3 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001007 230.0
YYD2_k127_4679002_4 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000002029 225.0
YYD2_k127_4679002_5 TIGR00255 family - - - 0.0000000000000000000000000000000000000000000000000000002982 204.0
YYD2_k127_4679002_6 protein conserved in bacteria K09922 - - 0.0000000000000000000000000000000000000000000000000008042 185.0
YYD2_k127_4679002_7 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000007996 196.0
YYD2_k127_4679002_8 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.000000000000000000000000000000002178 146.0
YYD2_k127_4679002_9 HNH nucleases - - - 0.0000000000000000002832 94.0
YYD2_k127_469661_0 Asparaginyl-tRNA synthetase K01893 GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006253 553.0
YYD2_k127_469661_1 PFAM FecR protein K20276 - - 0.00000000000000000000000000000000000009532 164.0
YYD2_k127_4701444_0 Carbamoyltransferase C-terminus K00612 - - 1.478e-247 796.0
YYD2_k127_4701444_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 438.0
YYD2_k127_4701444_2 zinc finger K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 304.0
YYD2_k127_4701444_3 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004973 309.0
YYD2_k127_4701444_4 - - - - 0.0000000000000001842 91.0
YYD2_k127_4701444_5 - - - - 0.00000000001395 68.0
YYD2_k127_4701444_6 - - - - 0.0000006071 61.0
YYD2_k127_4702764_0 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 1.036e-205 671.0
YYD2_k127_4702764_1 PFAM amidohydrolase 2 - - - 0.0000000000000000000000000000000000000000003865 160.0
YYD2_k127_4709341_0 Peptidase family M1 domain K01992 - - 4.313e-321 1030.0
YYD2_k127_4709341_1 (ABC) transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008583 404.0
YYD2_k127_4731753_0 4Fe-4S dicluster domain K00184 - - 6.41e-269 857.0
YYD2_k127_4731753_1 Highly conserved protein containing a thioredoxin domain K06888 - - 1.013e-236 751.0
YYD2_k127_4731753_10 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002632 283.0
YYD2_k127_4731753_11 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001294 276.0
YYD2_k127_4731753_12 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001733 268.0
YYD2_k127_4731753_13 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.0000000000000000000000000000000000000000000000000000000000000000002508 242.0
YYD2_k127_4731753_14 cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000007471 228.0
YYD2_k127_4731753_15 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0030312,GO:0032984,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000001398 217.0
YYD2_k127_4731753_16 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000001751 218.0
YYD2_k127_4731753_17 Peptidoglycan-synthase activator LpoB K07337 - - 0.00000000000000000000000000000000000000000000000000000000005677 211.0
YYD2_k127_4731753_18 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000001733 209.0
YYD2_k127_4731753_19 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.000000000000000000000000000000000000000000000000000000003827 209.0
YYD2_k127_4731753_2 heme-copper terminal oxidase activity K02274 - 1.9.3.1 4.286e-235 740.0
YYD2_k127_4731753_20 Domain of unknown function (DUF1949) - - - 0.00000000000000000000000000000000000000000000000000000001566 203.0
YYD2_k127_4731753_21 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000002674 185.0
YYD2_k127_4731753_22 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000000000000000000000000000000000004562 178.0
YYD2_k127_4731753_23 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000003646 171.0
YYD2_k127_4731753_24 Ferredoxin - - - 0.000000000000000000000000000000000000000001908 168.0
YYD2_k127_4731753_25 Pfam Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000002778 163.0
YYD2_k127_4731753_26 Ribosomal protein S9/S16 K02996 - - 0.00000000000000000000000000000000000003867 151.0
YYD2_k127_4731753_27 protein conserved in bacteria K09859 - - 0.000000000000000000000000000000000000313 161.0
YYD2_k127_4731753_28 Cytochrome c, class I K08738 - - 0.00000000000000000000000000000000002519 151.0
YYD2_k127_4731753_29 zinc metalloprotease K11749 - - 0.00000000000000000000000000000001252 136.0
YYD2_k127_4731753_3 Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 522.0
YYD2_k127_4731753_30 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000142 117.0
YYD2_k127_4731753_31 ParB-like nuclease domain - - - 0.0000000000000000006827 94.0
YYD2_k127_4731753_32 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.000000000000001939 79.0
YYD2_k127_4731753_33 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000004331 72.0
YYD2_k127_4731753_34 CAAX protease self-immunity K07052 - - 0.0000000002117 69.0
YYD2_k127_4731753_4 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000763 434.0
YYD2_k127_4731753_5 thymidylate synthase (FAD) activity K03465 - 2.1.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 409.0
YYD2_k127_4731753_6 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 346.0
YYD2_k127_4731753_7 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 298.0
YYD2_k127_4731753_8 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005145 297.0
YYD2_k127_4731753_9 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275,K02297 - 1.10.3.10,1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 299.0
YYD2_k127_4740100_0 ABC-type Fe3 transport system permease component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 479.0
YYD2_k127_4740100_1 ABC-type spermidine putrescine transport systems, ATPase components K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 334.0
YYD2_k127_4740100_2 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000768 269.0
YYD2_k127_4740100_3 Dihaem cytochrome c - - - 0.0004809 47.0
YYD2_k127_479612_0 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006002 319.0
YYD2_k127_479612_1 maltose binding K02027,K17329 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 324.0
YYD2_k127_479612_10 metallopeptidase activity K01387,K01730,K20276 - 3.4.24.3,4.2.2.6 0.00005883 57.0
YYD2_k127_479612_11 - - - - 0.0003851 45.0
YYD2_k127_479612_2 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000003799 283.0
YYD2_k127_479612_3 PFAM binding-protein-dependent transport systems inner membrane component K02025,K17242 - - 0.00000000000000000000000000000000000000000000000000000000000008231 226.0
YYD2_k127_479612_4 Binding-protein-dependent transport system inner membrane component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000009706 233.0
YYD2_k127_479612_5 PFAM ExsB family protein K06864 - - 0.0000000000000000000000000000000000000000000000000000002068 200.0
YYD2_k127_479612_6 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000000000000000006725 208.0
YYD2_k127_479612_7 Glycoside hydrolase family 3 K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000001384 210.0
YYD2_k127_479612_8 Peptidase family C25 - - - 0.00000000003638 78.0
YYD2_k127_4799868_0 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 417.0
YYD2_k127_4799868_1 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007755 395.0
YYD2_k127_4799868_2 polysaccharide catabolic process K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006188 291.0
YYD2_k127_4799868_3 polysaccharide catabolic process K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007468 285.0
YYD2_k127_4799868_4 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000001576 228.0
YYD2_k127_4799868_5 - - - - 0.000000000000000000000000000000000000000000000481 191.0
YYD2_k127_4799868_6 amine dehydrogenase activity - - - 0.000000000000000000000000000000006205 137.0
YYD2_k127_4799868_7 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000006441 97.0
YYD2_k127_4799868_8 Outer membrane efflux protein - - - 0.000000126 64.0
YYD2_k127_4799868_9 Belongs to the ompA family K03286 - - 0.000351 51.0
YYD2_k127_4840913_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002565 297.0
YYD2_k127_4840913_1 His Kinase A (phospho-acceptor) domain - - - 0.0000000000000000000000000000000000000000000000001774 198.0
YYD2_k127_4840913_2 metal-dependent phosphohydrolase, HD sub domain K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000003485 129.0
YYD2_k127_4840913_3 endonuclease activity K07451 - - 0.000000000003608 76.0
YYD2_k127_4857778_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009337 481.0
YYD2_k127_4857778_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05996,K07752 - 3.4.17.18,3.4.17.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 346.0
YYD2_k127_4857778_2 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001081 274.0
YYD2_k127_4857778_3 Protein of unknown function (DUF2892) - - - 0.000000000001419 70.0
YYD2_k127_4857778_4 extracellular matrix structural constituent - - - 0.000000000004394 79.0
YYD2_k127_4857778_5 - - - - 0.000000623 55.0
YYD2_k127_4859758_0 carbohydrate binding K21298 - 2.4.1.333 1.421e-234 751.0
YYD2_k127_4864991_0 Peptidase S8 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 402.0
YYD2_k127_4864991_1 PFAM formate-tetrahydrofolate ligase FTHFS K01938 - 6.3.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 357.0
YYD2_k127_4864991_3 Uncharacterised protein family UPF0066 K01628 - 4.1.2.17 0.00000000000000000000000000000000000000001246 158.0
YYD2_k127_4864991_4 Metallo-peptidase family M12 - - - 0.0000000000000000000000000000009168 141.0
YYD2_k127_4864991_5 cellulase activity K01186,K01197,K05988,K11931,K21449 - 3.2.1.11,3.2.1.18,3.2.1.35 0.0000000000000000005648 103.0
YYD2_k127_4864991_6 Belongs to the peptidase S8 family K14645 - - 0.0000000000008888 79.0
YYD2_k127_4872411_0 Domain of unknown function (DUF1998) K06877 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009301 628.0
YYD2_k127_4872411_1 Surface antigen variable number K07278 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 408.0
YYD2_k127_4872411_10 - - - - 0.00000000002721 76.0
YYD2_k127_4872411_2 Protein involved in meta-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 340.0
YYD2_k127_4872411_3 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007543 265.0
YYD2_k127_4872411_4 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000000000000000000000000000000000000000000000000000004129 215.0
YYD2_k127_4872411_5 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000127 156.0
YYD2_k127_4872411_7 LVIVD repeat K01179 - 3.2.1.4 0.000000000000000000000000002366 114.0
YYD2_k127_4872411_8 RNase_H superfamily K07502 - - 0.000000000000000000000000002368 126.0
YYD2_k127_4872411_9 long-chain fatty acid transport protein - - - 0.0000000000000000000005279 105.0
YYD2_k127_4893535_0 ABC transporter K06147,K18890 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003158 597.0
YYD2_k127_4893535_1 cystathionine gamma-synthase activity K01739,K01740,K01760,K01761 - 2.5.1.48,2.5.1.49,4.4.1.11,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007105 568.0
YYD2_k127_4893535_10 Alpha/beta hydrolase family - - - 0.0008517 52.0
YYD2_k127_4893535_2 ABC transporter, transmembrane region K18889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004752 457.0
YYD2_k127_4893535_3 3-demethylubiquinone-9 3-O-methyltransferase activity K16328 - 2.7.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 317.0
YYD2_k127_4893535_4 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000002963 240.0
YYD2_k127_4893535_5 PFAM Abortive infection protein - - - 0.00000000000000000000000000000000000001006 156.0
YYD2_k127_4893535_6 DinB superfamily - - - 0.00000000000000000000000000000000004368 144.0
YYD2_k127_4893535_7 Protein of unknown function (DUF3224) - - - 0.0000000000000000000000000000000001146 143.0
YYD2_k127_4893535_8 Sigma-54 interaction domain K10126 - - 0.0000000000000000003091 96.0
YYD2_k127_4893535_9 Domain of unknown function (DUF4388) - - - 0.0006528 52.0
YYD2_k127_4913478_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003638 498.0
YYD2_k127_4913478_1 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 460.0
YYD2_k127_4913478_10 vitamin B12 dependent methionine synthase, activation K00548 - 2.1.1.13 0.0000000000000000000000000001477 124.0
YYD2_k127_4913478_11 YceI-like domain - - - 0.000000000000000000000009329 110.0
YYD2_k127_4913478_12 protein secretion K09800 - - 0.000000000000000001406 99.0
YYD2_k127_4913478_13 extracellular matrix structural constituent - - - 0.0000004804 57.0
YYD2_k127_4913478_14 Cupin - - - 0.00004383 52.0
YYD2_k127_4913478_15 STAS domain - - - 0.0003108 48.0
YYD2_k127_4913478_2 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 339.0
YYD2_k127_4913478_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002966 311.0
YYD2_k127_4913478_4 Ankyrin repeat K15502,K15503,K15504 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003749 290.0
YYD2_k127_4913478_5 cellulase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002001 258.0
YYD2_k127_4913478_6 B12 binding domain K14084 - - 0.00000000000000000000000000000000000000000000000000000000003575 212.0
YYD2_k127_4913478_7 Homocysteine S-methyltransferase K00297,K00547,K00548 - 1.5.1.20,2.1.1.10,2.1.1.13 0.00000000000000000000000000000000000000000000000000000000462 211.0
YYD2_k127_4913478_8 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000003644 193.0
YYD2_k127_4913478_9 PFAM DinB family protein - - - 0.00000000000000000000000000001655 125.0
YYD2_k127_4926457_0 ABC-type sugar transport system periplasmic component K10439 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 351.0
YYD2_k127_4926457_1 - - - - 0.0000000000000000000000009487 110.0
YYD2_k127_4944043_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 2.01e-293 922.0
YYD2_k127_4944043_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008245 512.0
YYD2_k127_4944043_10 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000001776 221.0
YYD2_k127_4944043_11 HlyD membrane-fusion protein of T1SS K01993 - - 0.00000000000000000000000000000000000005666 154.0
YYD2_k127_4944043_12 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000000000000001296 105.0
YYD2_k127_4944043_13 Beta-lactamase superfamily domain - - - 0.000000000000000006176 98.0
YYD2_k127_4944043_14 Evidence 5 No homology to any previously reported sequences K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.00000000000000001486 92.0
YYD2_k127_4944043_15 protein trimerization K15368 - - 0.0000000002834 69.0
YYD2_k127_4944043_16 Histidine kinase - - - 0.0000000005694 61.0
YYD2_k127_4944043_17 Belongs to the sulfur carrier protein TusA family - - - 0.000000707 55.0
YYD2_k127_4944043_18 Phosphoribosyl transferase domain K00759 - 2.4.2.7 0.0000009881 50.0
YYD2_k127_4944043_19 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00001591 47.0
YYD2_k127_4944043_2 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007658 520.0
YYD2_k127_4944043_20 Domain of unknown function (DUF4870) - - - 0.0003578 51.0
YYD2_k127_4944043_3 Domains REC, sigma54 interaction, HTH8 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 475.0
YYD2_k127_4944043_4 Membrane dipeptidase (Peptidase family M19) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 339.0
YYD2_k127_4944043_5 ABC-type multidrug transport system ATPase component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 331.0
YYD2_k127_4944043_6 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004194 307.0
YYD2_k127_4944043_7 Proline dehydrogenase K00318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000464 286.0
YYD2_k127_4944043_8 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002394 259.0
YYD2_k127_4944043_9 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000007995 244.0
YYD2_k127_494650_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate K03701 - - 7.367e-282 894.0
YYD2_k127_494650_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 4.718e-214 686.0
YYD2_k127_494650_2 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 345.0
YYD2_k127_494650_3 Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004158 292.0
YYD2_k127_494650_4 MazG family K02428,K02499 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000006427 211.0
YYD2_k127_494650_5 SMART PAS domain containing protein - - - 0.000000000000000000000000000000001129 147.0
YYD2_k127_494650_6 phosphohistidine phosphatase, SixA K08296 - - 0.000000000000000000000000008692 121.0
YYD2_k127_494650_7 cheY-homologous receiver domain - - - 0.0000000000000001686 86.0
YYD2_k127_494650_8 His Kinase A (phosphoacceptor) domain - - - 0.000001783 61.0
YYD2_k127_494650_9 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0007915 52.0
YYD2_k127_5011632_0 Rieske [2Fe-2S] domain K18068 - 1.14.12.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 305.0
YYD2_k127_5011632_1 Thermostable hemolysin - - - 0.0000000000000000006451 90.0
YYD2_k127_5011632_2 ATPases associated with a variety of cellular activities K01996 - - 0.00000000005432 64.0
YYD2_k127_5026073_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007471 340.0
YYD2_k127_5026073_1 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006428 326.0
YYD2_k127_5026073_2 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000003541 231.0
YYD2_k127_5026073_3 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000004252 178.0
YYD2_k127_5026073_4 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000003394 165.0
YYD2_k127_5026073_5 HNH nucleases - - - 0.00000000000000000000000000000000000001826 158.0
YYD2_k127_5026073_6 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000001656 149.0
YYD2_k127_5026073_7 SpoVG K06412 - - 0.00000000000000000000000175 107.0
YYD2_k127_5026073_8 Glycosyl hydrolase family 70 K01142,K01176 - 3.1.11.2,3.2.1.1 0.00000004065 67.0
YYD2_k127_5026073_9 PFAM Fibronectin, type III domain K01179,K06882 - 3.2.1.4 0.00000009309 66.0
YYD2_k127_5030050_0 COG NOG10142 non supervised orthologous group - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006349 519.0
YYD2_k127_5030050_1 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000473 457.0
YYD2_k127_5030050_2 Fumarase C C-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002691 392.0
YYD2_k127_5030050_3 PFAM regulatory protein LuxR K13041 - - 0.00000000000000000000000000000000000000000000000000000000000008958 228.0
YYD2_k127_5030050_4 Protein of unknown function, DUF481 - - - 0.00000000000000000000000000000000000000000009152 173.0
YYD2_k127_5030050_5 - - - - 0.0000000000000000000000000004898 117.0
YYD2_k127_5030050_6 Pfam Response regulator receiver - - - 0.000000000000000000000000003961 118.0
YYD2_k127_5035002_0 Carbamoyltransferase C-terminus K00612 - - 1.093e-232 733.0
YYD2_k127_5035002_1 Belongs to the peptidase S16 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008264 583.0
YYD2_k127_5035002_2 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007892 365.0
YYD2_k127_5035002_3 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000002753 258.0
YYD2_k127_5035002_4 Cobalamin (Vitamin B12) biosynthesis CbiM protein K02007 - - 0.000000000000007206 83.0
YYD2_k127_5035002_5 - - - - 0.000000000512 64.0
YYD2_k127_5035002_6 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000203 56.0
YYD2_k127_5038126_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 423.0
YYD2_k127_5038126_1 Glycosyl transferase 4-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008242 350.0
YYD2_k127_5038126_2 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 326.0
YYD2_k127_5038126_3 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009639 255.0
YYD2_k127_5038126_4 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000002107 231.0
YYD2_k127_5038126_5 NAD(P)H-binding K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000002575 233.0
YYD2_k127_5038126_6 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000001279 184.0
YYD2_k127_5038126_7 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000005166 191.0
YYD2_k127_5038126_8 polysaccharide export K01991 - - 0.000000000000000000000000000000000001816 156.0
YYD2_k127_5053229_0 amino acid activation for nonribosomal peptide biosynthetic process K17713,K20952 - - 0.0000000000000000000000000000000000000000000000006656 198.0
YYD2_k127_5053229_1 SPTR Peptidase S8 and S53 subtilisin kexin sedolisin K01113,K14645,K17713 - 3.1.3.1 0.0000000000000000000000000000000000000001796 173.0
YYD2_k127_5053229_2 Fibronectin type 3 domain - - - 0.0000002828 64.0
YYD2_k127_5053598_0 L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004722 572.0
YYD2_k127_5053598_1 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004834 376.0
YYD2_k127_5053598_10 COG2723 Beta-glucosidase 6-phospho-beta-glucosidase beta- galactosidase - - - 0.000000000000000005576 85.0
YYD2_k127_5053598_11 peptidase activity, acting on L-amino acid peptides - - - 0.0000000000000002552 94.0
YYD2_k127_5053598_12 PFAM YbbR family protein - - - 0.0000000000003189 80.0
YYD2_k127_5053598_13 PFAM Peptidoglycan-binding lysin domain - - - 0.000000000279 72.0
YYD2_k127_5053598_14 PFAM VanZ like family - - - 0.000000001032 64.0
YYD2_k127_5053598_2 smart pdz dhr glgf K04771,K04772 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 343.0
YYD2_k127_5053598_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 331.0
YYD2_k127_5053598_4 PhoH-like protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 321.0
YYD2_k127_5053598_5 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000002172 182.0
YYD2_k127_5053598_6 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000001746 186.0
YYD2_k127_5053598_7 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000009039 157.0
YYD2_k127_5053598_8 Calcineurin-like phosphoesterase K03269 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 0.0000000000000000000000000000000000001002 151.0
YYD2_k127_5053598_9 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.000000000000000000000007517 107.0
YYD2_k127_5073743_0 COG0346 Lactoylglutathione lyase and related lyases K15975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008765 355.0
YYD2_k127_5073743_1 phospholipase Carboxylesterase K06999 - - 0.00000000000000000000000000000001297 138.0
YYD2_k127_5073743_2 Polyphosphate kinase 2 (PPK2) - - - 0.00000000000089 68.0
YYD2_k127_507640_0 4 iron, 4 sulfur cluster binding - - - 2.911e-221 698.0
YYD2_k127_507640_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000008053 183.0
YYD2_k127_507640_2 NHL repeat - - - 0.00000000000005409 81.0
YYD2_k127_5104014_0 nitrous-oxide reductase activity K00376,K02275 GO:0000041,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006812,GO:0006825,GO:0008150,GO:0015677,GO:0030001,GO:0042597,GO:0044464,GO:0051179,GO:0051234 1.7.2.4,1.9.3.1 0.0 1028.0
YYD2_k127_5104014_1 Periplasmic copper-binding protein (NosD) K07218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 425.0
YYD2_k127_5104014_10 2 iron, 2 sulfur cluster binding - - - 0.000000000000000004255 90.0
YYD2_k127_5104014_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005973 308.0
YYD2_k127_5104014_3 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016491,GO:0016651,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002615 289.0
YYD2_k127_5104014_4 lipoprotein involved in nitrous oxide reduction K19342 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000102 259.0
YYD2_k127_5104014_5 ABC transporter K19340 - - 0.00000000000000000000000000000000000000000000000000000000000000000002981 239.0
YYD2_k127_5104014_6 PFAM Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000006381 252.0
YYD2_k127_5104014_7 ABC-2 family transporter protein K19341 - - 0.000000000000000000000000000000000000000000000000000000000000007911 227.0
YYD2_k127_5104014_8 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000004616 163.0
YYD2_k127_5104014_9 Cytochrome c - - - 0.00000000000000000000000000000000004702 141.0
YYD2_k127_5123582_0 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 324.0
YYD2_k127_5123582_1 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001609 239.0
YYD2_k127_5123582_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001249 240.0
YYD2_k127_5123582_3 Transcriptional coactivator pterin dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000000000009196 153.0
YYD2_k127_5123582_4 Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia K01426 - 3.5.1.4 0.00000000000000000000000000000000006777 150.0
YYD2_k127_5123582_5 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000002582 129.0
YYD2_k127_5123582_6 ECF sigma factor - - - 0.00000000000000000000000007758 113.0
YYD2_k127_5123582_7 Thioesterase-like superfamily K01075 - 3.1.2.23 0.0000000000000000000000002772 111.0
YYD2_k127_5123582_8 Beta-lactamase superfamily domain - - - 0.000000000000000008765 94.0
YYD2_k127_5123582_9 Putative zinc-finger - - - 0.0006758 48.0
YYD2_k127_5128355_0 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 1.892e-201 647.0
YYD2_k127_5128355_1 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006255 588.0
YYD2_k127_5128355_10 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000003429 146.0
YYD2_k127_5128355_11 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000009151 81.0
YYD2_k127_5128355_12 Staphylococcal nuclease homologue - - - 0.000000000008733 74.0
YYD2_k127_5128355_13 PFAM Sulfatase K01130 - 3.1.6.1 0.000001286 50.0
YYD2_k127_5128355_2 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008057 609.0
YYD2_k127_5128355_3 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003809 520.0
YYD2_k127_5128355_4 Pyruvate ferredoxin oxidoreductase and related K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 473.0
YYD2_k127_5128355_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 374.0
YYD2_k127_5128355_6 PFAM thiamine pyrophosphate protein domain protein TPP-binding K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 300.0
YYD2_k127_5128355_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000007691 229.0
YYD2_k127_5128355_8 Protein of unknown function (DUF664) - - - 0.0000000000000000000000000000000000000000002261 164.0
YYD2_k127_5128355_9 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000001794 168.0
YYD2_k127_5134230_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 1.789e-207 664.0
YYD2_k127_5134230_1 Specifically methylates the N7 position of guanine in position 535 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.000000003125 65.0
YYD2_k127_5134230_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0007318 42.0
YYD2_k127_5162881_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 7.478e-222 716.0
YYD2_k127_5162881_1 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005156 282.0
YYD2_k127_5162881_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000006362 105.0
YYD2_k127_5162881_3 ThiS family K03636 - - 0.0000001848 56.0
YYD2_k127_5167736_0 Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 394.0
YYD2_k127_5167736_1 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000009686 218.0
YYD2_k127_5167736_2 cellulose binding - - - 0.000000000000000000000000000000000000000000000000003049 197.0
YYD2_k127_5167736_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000003703 128.0
YYD2_k127_5167736_4 lipolytic protein G-D-S-L family - - - 0.000000000000000000004018 106.0
YYD2_k127_5167736_5 xylanase chitin deacetylase - - - 0.000002458 54.0
YYD2_k127_5168896_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 324.0
YYD2_k127_5168896_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007661 301.0
YYD2_k127_5168896_2 SMART PAS domain containing protein - - - 0.0000000000000000000000000000000000007885 154.0
YYD2_k127_5168896_3 Cytochrome c - - - 0.00000000000000000000000000003129 132.0
YYD2_k127_5168896_4 response regulator - - - 0.0001809 53.0
YYD2_k127_5171245_0 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 516.0
YYD2_k127_5171245_1 converts alpha-aldose to the beta-anomer - - - 0.00000000000000000000000000000000000000000000000000006933 199.0
YYD2_k127_5171245_2 - - - - 0.00000000000000000000000001212 120.0
YYD2_k127_5171245_3 PFAM TfoX domain protein K07343 - - 0.00000000000000000000004336 103.0
YYD2_k127_5171245_4 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000001121 93.0
YYD2_k127_5190639_0 PFAM Acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006524 284.0
YYD2_k127_5190639_1 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 GO:0003674,GO:0003824,GO:0004016,GO:0009975,GO:0016829,GO:0016849 2.7.7.85 0.0000000000000000000000000000000000000000000000000000000000000000000002194 246.0
YYD2_k127_5190639_2 dihydropteroate synthase K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000004342 188.0
YYD2_k127_5190639_3 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000003941 67.0
YYD2_k127_5205657_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007211 581.0
YYD2_k127_5205657_1 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000009295 211.0
YYD2_k127_5205657_2 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000001843 69.0
YYD2_k127_5224675_0 homoserine dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007849 524.0
YYD2_k127_5224675_1 PFAM NAD-dependent epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000717 376.0
YYD2_k127_5224675_2 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005433 282.0
YYD2_k127_5224675_3 C-methyltransferase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002881 278.0
YYD2_k127_5224675_4 ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005501 273.0
YYD2_k127_5224675_5 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K00067,K01790 - 1.1.1.133,5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000002208 229.0
YYD2_k127_5224675_7 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000003278 166.0
YYD2_k127_5224675_8 antisigma factor binding K04749 - - 0.000000000006612 71.0
YYD2_k127_5224675_9 protein histidine kinase activity K06375 - - 0.00000000012 70.0
YYD2_k127_5243758_0 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000841 580.0
YYD2_k127_5243758_1 Histidine kinase-like ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000009296 218.0
YYD2_k127_5276883_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 6.648e-210 659.0
YYD2_k127_5276883_1 infection protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005351 257.0
YYD2_k127_5276883_3 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.00000000000000000000000000002961 126.0
YYD2_k127_5276883_4 YceI-like domain - - - 0.000000000000000000001091 102.0
YYD2_k127_5276883_5 - - - - 0.00000000000006872 76.0
YYD2_k127_5276883_6 TIGRFAM FemAB-related protein, PEP-CTERM system-associated - - - 0.000000003534 68.0
YYD2_k127_5283837_0 single-stranded DNA 5'-3' exodeoxyribonuclease activity K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 334.0
YYD2_k127_5283837_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000625 327.0
YYD2_k127_5283837_2 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007903 285.0
YYD2_k127_5283837_3 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000000001224 175.0
YYD2_k127_5283837_4 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation K06287 - - 0.000000000000000000000000000000000000001129 158.0
YYD2_k127_5283837_5 SnoaL-like domain - - - 0.0000000000000000000000000001365 122.0
YYD2_k127_5283837_6 phosphoglycerate mutase K02226,K22316 GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006401,GO:0006725,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016891,GO:0016893,GO:0017144,GO:0018130,GO:0019438,GO:0019439,GO:0032296,GO:0033013,GO:0033014,GO:0034641,GO:0034655,GO:0042364,GO:0042578,GO:0043170,GO:0043755,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046700,GO:0051186,GO:0051188,GO:0071667,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 3.1.26.4,3.1.3.73 0.000000000000000000000000003603 121.0
YYD2_k127_5283837_7 C4-type zinc ribbon domain K07164,K22391 - 3.5.4.16 0.000000000000000003153 93.0
YYD2_k127_5283837_8 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000000002462 89.0
YYD2_k127_5286632_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 619.0
YYD2_k127_5286632_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035597,GO:0035600,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050497,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:0090304,GO:1901360 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 480.0
YYD2_k127_5286632_2 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 447.0
YYD2_k127_5286632_3 Belongs to the peptidase S41A family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 314.0
YYD2_k127_5286632_4 phosphoserine phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001208 271.0
YYD2_k127_5286632_5 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001451 266.0
YYD2_k127_5286632_6 Cytochrome c - - - 0.000000000000000000000000000000000000000000002511 171.0
YYD2_k127_5286632_7 - - - - 0.0000000000000000000000008729 112.0
YYD2_k127_5286632_8 domain protein K20276 - - 0.0000000000000005544 93.0
YYD2_k127_5286632_9 Membrane - - - 0.00000000000001341 85.0
YYD2_k127_5293524_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1314.0
YYD2_k127_5293524_1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K04085 - - 3.014e-254 794.0
YYD2_k127_5293524_10 Evidence 5 No homology to any previously reported sequences K03088 - - 0.000000000003098 80.0
YYD2_k127_5293524_11 Alkylmercury lyase - - - 0.0000000003777 72.0
YYD2_k127_5293524_12 Alkylmercury lyase - - - 0.0000000588 56.0
YYD2_k127_5293524_13 exo-alpha-(2->6)-sialidase activity - - - 0.000003278 59.0
YYD2_k127_5293524_2 Chalcone and stilbene synthases, C-terminal domain K16167 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006629,GO:0006725,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009273,GO:0009698,GO:0009699,GO:0009714,GO:0009715,GO:0009987,GO:0016020,GO:0016043,GO:0019438,GO:0019748,GO:0022607,GO:0032991,GO:0034081,GO:0042180,GO:0042181,GO:0042546,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0071554,GO:0071704,GO:0071766,GO:0071770,GO:0071840,GO:0071944,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 344.0
YYD2_k127_5293524_3 Biotin-lipoyl like K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 327.0
YYD2_k127_5293524_4 Domain of unknown function (DUF3413) K07014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001558 284.0
YYD2_k127_5293524_5 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000000000000000000000000000000001986 172.0
YYD2_k127_5293524_6 Isoprenylcysteine carboxyl methyltransferase (ICMT) family K16168 - - 0.0000000000000000000000000000000000000002474 156.0
YYD2_k127_5293524_7 PFAM Fibronectin type III domain - - - 0.0000000000000000000000000000004611 142.0
YYD2_k127_5293524_8 - - - - 0.0000000000000001297 81.0
YYD2_k127_5293524_9 cellulose binding - - - 0.0000000000007329 82.0
YYD2_k127_5294572_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009536,GO:0040007,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005471 400.0
YYD2_k127_5294572_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000008999 250.0
YYD2_k127_5294572_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000004996 188.0
YYD2_k127_5294572_3 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000007563 146.0
YYD2_k127_5294572_4 Response regulator receiver - - - 0.000000000000000000000000003588 129.0
YYD2_k127_5311270_0 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000005946 119.0
YYD2_k127_5311270_1 lipolytic protein G-D-S-L family - - - 0.000003798 58.0
YYD2_k127_5311270_2 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0008628 49.0
YYD2_k127_5367482_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 587.0
YYD2_k127_5367482_1 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 451.0
YYD2_k127_5367482_10 Heparinase II/III-like protein - - - 0.000000000000000000000002787 120.0
YYD2_k127_5367482_11 WD domain, G-beta repeat - - - 0.0000002803 58.0
YYD2_k127_5367482_12 Peptidase family M28 K05994 - 3.4.11.10 0.00004452 57.0
YYD2_k127_5367482_2 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008977 435.0
YYD2_k127_5367482_3 HI0933-like protein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 435.0
YYD2_k127_5367482_4 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 410.0
YYD2_k127_5367482_5 histidine kinase, dimerisation and phosphoacceptor region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 317.0
YYD2_k127_5367482_6 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000000000001598 241.0
YYD2_k127_5367482_7 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001098 232.0
YYD2_k127_5367482_8 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000008998 235.0
YYD2_k127_5367482_9 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000001123 161.0
YYD2_k127_5373427_0 iron assimilation - - - 4.119e-221 692.0
YYD2_k127_5373427_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00383 - 1.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 604.0
YYD2_k127_5373427_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005308 533.0
YYD2_k127_5373427_3 Asparaginase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 501.0
YYD2_k127_5373427_4 Glutaminase K01425 - 3.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 394.0
YYD2_k127_5373427_5 - K07221 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 356.0
YYD2_k127_5373427_6 Tfp pilus assembly protein FimV - - - 0.000000000000000000000000000000000000000000000000000000000000000002026 239.0
YYD2_k127_5373427_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000006572 226.0
YYD2_k127_5373427_8 - - - - 0.0000000000000000000000000003989 125.0
YYD2_k127_5373427_9 Fumarase C C-terminus - - - 0.000004886 48.0
YYD2_k127_5417949_0 Succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 9.267e-312 965.0
YYD2_k127_5417949_1 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000673 356.0
YYD2_k127_5417949_10 Haem-binding domain - - - 0.00000000000000000000000000000000000000000000000000001561 192.0
YYD2_k127_5417949_11 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.000000000000000000000000000000000000000000000000000355 192.0
YYD2_k127_5417949_12 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000002042 185.0
YYD2_k127_5417949_13 endonuclease activity K07451 - - 0.0000000003937 61.0
YYD2_k127_5417949_14 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004721,GO:0005488,GO:0005524,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008772,GO:0009987,GO:0016208,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0017076,GO:0018105,GO:0018193,GO:0018209,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050790,GO:0065007,GO:0065009,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.11.5 0.00055 46.0
YYD2_k127_5417949_2 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 316.0
YYD2_k127_5417949_3 dTDP biosynthetic process K00560,K00943 - 2.1.1.45,2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000001448 282.0
YYD2_k127_5417949_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000001645 260.0
YYD2_k127_5417949_5 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000002625 253.0
YYD2_k127_5417949_6 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000001321 236.0
YYD2_k127_5417949_7 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000001699 223.0
YYD2_k127_5417949_8 transferase activity, transferring glycosyl groups K00754,K19422 GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.0000000000000000000000000000000000000000000000000000004426 207.0
YYD2_k127_5417949_9 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000004778 195.0
YYD2_k127_5429252_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009763 606.0
YYD2_k127_5429252_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K08483 - 2.7.3.9,2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 536.0
YYD2_k127_5429252_10 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 290.0
YYD2_k127_5429252_11 Bifunctional phosphoglucose phosphomannose isomerase K15916 - 5.3.1.8,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000003553 263.0
YYD2_k127_5429252_12 - - - - 0.000000000000000000000000000000000000000000000008354 183.0
YYD2_k127_5429252_13 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000001233 175.0
YYD2_k127_5429252_14 endonuclease activity K07451 - - 0.0000000000000000000000000000000001018 149.0
YYD2_k127_5429252_15 PTS system sorbose subfamily IIB component K02794,K19507 - 2.7.1.191 0.000000000000000000000000000005744 129.0
YYD2_k127_5429252_16 Peptidase M56 - - - 0.0000000000000000001013 104.0
YYD2_k127_5429252_17 sigma 54 modulation protein K05808 - - 0.0000000000000000001386 92.0
YYD2_k127_5429252_18 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0000000000000001194 80.0
YYD2_k127_5429252_19 Lipopolysaccharide-assembly, LptC-related K09774,K11719 - - 0.00000000000001353 81.0
YYD2_k127_5429252_2 Amino-transferase class IV K03342 - 2.6.1.85,4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000482 495.0
YYD2_k127_5429252_20 PTS HPr component phosphorylation site K11189 - - 0.0000000003601 67.0
YYD2_k127_5429252_21 PTS system mannose/fructose/sorbose family IID component - - - 0.0000000003835 72.0
YYD2_k127_5429252_22 Evidence 5 No homology to any previously reported sequences - - - 0.0000004204 61.0
YYD2_k127_5429252_24 COG2893 Phosphotransferase system, mannose fructose-specific component IIA K02793 - 2.7.1.191 0.0000174 57.0
YYD2_k127_5429252_3 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007526 481.0
YYD2_k127_5429252_4 Lipase maturation factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008615 489.0
YYD2_k127_5429252_5 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 366.0
YYD2_k127_5429252_6 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 334.0
YYD2_k127_5429252_7 lipopolysaccharide transport protein B ATP-binding component of ABC superfamily K01990,K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 321.0
YYD2_k127_5429252_8 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 324.0
YYD2_k127_5429252_9 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004271 299.0
YYD2_k127_5440514_0 HI0933-like protein - - - 4.725e-234 746.0
YYD2_k127_5440514_1 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003602 459.0
YYD2_k127_5440514_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170,K00187 - 1.2.7.1,1.2.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006654 383.0
YYD2_k127_5458228_0 PFAM Glycosyl transferases group 1 K16703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004278 428.0
YYD2_k127_5458228_1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid K03328,K16695 - - 0.0000000000000000000000000001353 124.0
YYD2_k127_5458228_2 3-demethylubiquinone-9 3-O-methyltransferase activity K06219 - - 0.0000000000000000000000000003819 124.0
YYD2_k127_5458228_3 Cna B domain protein - - - 0.00000521 59.0
YYD2_k127_5458228_4 Sulfotransferase domain - - - 0.00002837 57.0
YYD2_k127_5474361_0 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 4.975e-236 759.0
YYD2_k127_5474361_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 521.0
YYD2_k127_5474361_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008449 368.0
YYD2_k127_5474361_3 HAD-superfamily hydrolase, subfamily IB, PSPase-like - - - 0.000000000000000000000000000000000000001224 160.0
YYD2_k127_5474361_4 - - - - 0.0000000000000000000000000000000000000119 160.0
YYD2_k127_5474361_5 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000004459 143.0
YYD2_k127_5474361_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08256 - 2.4.1.345,2.7.8.5 0.00000000000000000000000000000000008495 141.0
YYD2_k127_5504791_0 Belongs to the DNA photolyase family K01669 GO:0000003,GO:0000166,GO:0000719,GO:0001101,GO:0002252,GO:0002376,GO:0003006,GO:0003674,GO:0003824,GO:0003904,GO:0003913,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005773,GO:0006139,GO:0006259,GO:0006281,GO:0006290,GO:0006325,GO:0006338,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006874,GO:0006875,GO:0006950,GO:0006952,GO:0006974,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007623,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009314,GO:0009414,GO:0009415,GO:0009416,GO:0009605,GO:0009606,GO:0009607,GO:0009615,GO:0009628,GO:0009637,GO:0009638,GO:0009642,GO:0009645,GO:0009646,GO:0009648,GO:0009719,GO:0009725,GO:0009785,GO:0009791,GO:0009881,GO:0009882,GO:0009888,GO:0009893,GO:0009909,GO:0009911,GO:0009987,GO:0010033,GO:0010035,GO:0010073,GO:0010075,GO:0010118,GO:0010228,GO:0010244,GO:0010617,GO:0014070,GO:0016043,GO:0016604,GO:0016829,GO:0016830,GO:0017076,GO:0019222,GO:0019637,GO:0019725,GO:0022414,GO:0022603,GO:0023052,GO:0030003,GO:0030522,GO:0030554,GO:0031323,GO:0031325,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0033993,GO:0034641,GO:0035639,GO:0036094,GO:0038023,GO:0040008,GO:0042221,GO:0042592,GO:0042726,GO:0042752,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0048037,GO:0048507,GO:0048509,GO:0048511,GO:0048518,GO:0048522,GO:0048571,GO:0048573,GO:0048574,GO:0048580,GO:0048582,GO:0048583,GO:0048608,GO:0048638,GO:0048731,GO:0048831,GO:0048856,GO:0048878,GO:0050660,GO:0050662,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051094,GO:0051186,GO:0051239,GO:0051240,GO:0051276,GO:0051480,GO:0051607,GO:0051704,GO:0051707,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055086,GO:0060089,GO:0061458,GO:0065007,GO:0065008,GO:0070013,GO:0071214,GO:0071478,GO:0071482,GO:0071483,GO:0071704,GO:0071840,GO:0071949,GO:0072387,GO:0072503,GO:0072507,GO:0090304,GO:0097159,GO:0097367,GO:0098542,GO:0098771,GO:0104004,GO:0140097,GO:1900618,GO:1901265,GO:1901360,GO:1901363,GO:1901371,GO:1901564,GO:1901700,GO:1902347,GO:1905421,GO:2000024,GO:2000026,GO:2000028,GO:2000241,GO:2000243,GO:2000377,GO:2000379 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008451 578.0
YYD2_k127_5504791_1 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000001182 241.0
YYD2_k127_5504791_2 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000008604 203.0
YYD2_k127_5504791_3 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000000000001389 158.0
YYD2_k127_5504791_4 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.000000000000000000000000000000000005296 147.0
YYD2_k127_5504791_5 membrane - - - 0.0000000000000000000000000000005191 133.0
YYD2_k127_5504791_6 domain, Protein - - - 0.0000000000000000000001573 112.0
YYD2_k127_5504791_7 domain, Protein - - - 0.000000002052 70.0
YYD2_k127_5523441_0 4Fe-4S dicluster domain K00184 - - 2.092e-239 772.0
YYD2_k127_5523441_1 Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007482 433.0
YYD2_k127_5548988_0 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214 - 3.2.1.68 1.195e-222 710.0
YYD2_k127_5548988_1 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 353.0
YYD2_k127_5548988_2 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 312.0
YYD2_k127_5548988_3 Cytochrome c mono- and diheme variants - - - 0.000000000000000000000000000000000000000000000000000000000001055 216.0
YYD2_k127_5548988_4 pyridoxamine 5-phosphate - - - 0.00000000000008715 76.0
YYD2_k127_5549269_0 Uncharacterized protein family UPF0004 K18707 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035598,GO:0035600,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050497,GO:0071704,GO:0090304,GO:1901360 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 371.0
YYD2_k127_5549269_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000001235 218.0
YYD2_k127_5549269_2 Tetratricopeptide repeat - - - 0.00000005085 64.0
YYD2_k127_5549269_3 - - - - 0.00000008511 62.0
YYD2_k127_5551620_0 Peptidase family C25 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 346.0
YYD2_k127_5551620_1 LVIVD repeat K01179 - 3.2.1.4 0.0000000000000002073 80.0
YYD2_k127_5557676_0 PFAM Cytochrome c assembly protein K02198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004408 617.0
YYD2_k127_5557676_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 357.0
YYD2_k127_5557676_10 subunit of a heme lyase K02200 - - 0.0000000001131 74.0
YYD2_k127_5557676_11 - - - - 0.00000001394 60.0
YYD2_k127_5557676_12 endonuclease activity K07451 - - 0.00000005402 65.0
YYD2_k127_5557676_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005004 285.0
YYD2_k127_5557676_3 Cytochrome C assembly protein K02195 GO:0001539,GO:0002048,GO:0002049,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006518,GO:0006629,GO:0006643,GO:0006664,GO:0006807,GO:0006810,GO:0006928,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009237,GO:0009247,GO:0009636,GO:0009987,GO:0015886,GO:0016020,GO:0016021,GO:0016209,GO:0016491,GO:0016684,GO:0019184,GO:0019290,GO:0019748,GO:0031224,GO:0031226,GO:0034641,GO:0040011,GO:0042221,GO:0043043,GO:0043107,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044425,GO:0044459,GO:0044464,GO:0044550,GO:0046467,GO:0048870,GO:0050896,GO:0051179,GO:0051181,GO:0051186,GO:0051188,GO:0051234,GO:0051674,GO:0051716,GO:0055114,GO:0070887,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0071973,GO:0071975,GO:0071977,GO:0071978,GO:0097237,GO:0097588,GO:0098754,GO:0098869,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901678,GO:1903509,GO:1990748 - 0.000000000000000000000000000000000000000000000000000000000000000003861 233.0
YYD2_k127_5557676_4 PFAM ABC transporter related K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000007006 180.0
YYD2_k127_5557676_5 PFAM cytochrome c-type biogenesis protein CcmB K02194 - - 0.0000000000000000000000000000000000000000000396 180.0
YYD2_k127_5557676_6 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.00000000000000000000000000000000000000002265 155.0
YYD2_k127_5557676_7 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000651 149.0
YYD2_k127_5557676_8 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000001033 123.0
YYD2_k127_5557676_9 - - - - 0.000000000000000000001751 109.0
YYD2_k127_5566539_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 563.0
YYD2_k127_5566539_1 Cytochrome b(N-terminal)/b6/petB K00410,K00412,K02635,K02637 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 407.0
YYD2_k127_5566539_2 Cytochrome c554 and c-prime K03620 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 348.0
YYD2_k127_5566539_3 4Fe-4S binding domain K08358 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 305.0
YYD2_k127_5566539_4 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 GO:0003674,GO:0003824,GO:0004735,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0017144,GO:0018130,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0055114,GO:0055129,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002373 284.0
YYD2_k127_5566539_5 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K04013,K15876 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001309 253.0
YYD2_k127_5566539_6 Rieske [2Fe-2S] domain K00411,K02636,K03886 - 1.10.2.2,1.10.9.1 0.0000000000000000000000000000000000000000000001036 173.0
YYD2_k127_5566539_7 Prokaryotic cytochrome b561 - - - 0.000000000000000000001309 103.0
YYD2_k127_5640423_0 Glycosyltransferase Family 4 - - - 8.607e-298 925.0
YYD2_k127_5640423_1 PFAM RNA recognition motif - - - 0.000000000000000000000000000000008455 133.0
YYD2_k127_5640423_2 PFAM RNP-1 like RNA-binding protein - - - 0.000000000000000000003625 96.0
YYD2_k127_5640423_3 protein secretion - - - 0.00000001187 58.0
YYD2_k127_5654573_0 response regulator K07782 - - 0.000000000000000000000000000000000000000000003483 178.0
YYD2_k127_5654573_1 GGDEF domain - - - 0.0000000000000000000000000000000000000007883 152.0
YYD2_k127_5654573_2 translation release factor activity - - - 0.0000000000000000000000000007728 124.0
YYD2_k127_5658940_0 PA domain - - - 4.213e-202 644.0
YYD2_k127_5658940_1 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 499.0
YYD2_k127_5658940_2 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 341.0
YYD2_k127_5664854_0 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005013 284.0
YYD2_k127_5664854_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005651 283.0
YYD2_k127_5664854_2 SMART phosphoesterase PHP domain protein - - - 0.000000000000000000000000000000000000000001371 179.0
YYD2_k127_5666513_0 Heat shock 70 kDa protein K04043 - - 3.999e-249 782.0
YYD2_k127_5666513_1 GTPase activity K03596 - - 0.0000000000000000000000000000000000000000000000000000000000000000003675 231.0
YYD2_k127_5666513_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000003662 221.0
YYD2_k127_5666513_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000004643 224.0
YYD2_k127_5666513_4 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000001803 160.0
YYD2_k127_5666513_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000006005 126.0
YYD2_k127_5666513_6 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000001675 106.0
YYD2_k127_5672013_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 614.0
YYD2_k127_5672013_1 PFAM Alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 511.0
YYD2_k127_5672013_2 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003524 333.0
YYD2_k127_5672013_3 Intradiol ring-cleavage dioxygenase K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000000006908 217.0
YYD2_k127_5672013_4 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000317 81.0
YYD2_k127_5679443_0 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 329.0
YYD2_k127_5679443_1 oxidation-reduction process K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000000000001614 185.0
YYD2_k127_5679443_2 Cupin - - - 0.000000000000000000000000000000000000000000001642 169.0
YYD2_k127_5681731_0 - - - - 0.0000000000000000000000000000000000000000000000000000000001074 212.0
YYD2_k127_5681731_1 Protein of unknown function (DUF998) - - - 0.0000000000000000000000000000000000000003127 162.0
YYD2_k127_5681731_2 - - - - 0.0000000000000000000000000000000008142 143.0
YYD2_k127_5713211_0 nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 405.0
YYD2_k127_5713211_1 PFAM Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000004574 182.0
YYD2_k127_5713211_2 recA bacterial DNA recombination protein K03553 - - 0.0000000000000000000000000000000000000000000000000962 183.0
YYD2_k127_5713211_3 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104,K03325,K03741,K03892,K18701 - 1.20.4.1,2.8.4.2,3.1.3.48 0.0000000000000000000000000000000000000000006409 161.0
YYD2_k127_5713211_4 TfoX N-terminal domain - - - 0.0000000000000000000000000000000006469 135.0
YYD2_k127_5715379_0 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 409.0
YYD2_k127_5715379_1 domain, Protein - - - 0.000000000000000000000000984 111.0
YYD2_k127_576188_0 Dehydrogenase K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003466 434.0
YYD2_k127_576188_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 293.0
YYD2_k127_576188_2 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001443 270.0
YYD2_k127_576188_3 Electron transfer flavoprotein domain K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005819 246.0
YYD2_k127_576188_4 - - - - 0.0000000000000000000000002296 124.0
YYD2_k127_576188_5 LVIVD repeat K01179 - 3.2.1.4 0.000000000000000739 78.0
YYD2_k127_5763929_0 Ser Thr phosphatase family protein - - - 5.524e-321 1036.0
YYD2_k127_5763929_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.207e-314 982.0
YYD2_k127_5763929_10 cellulose binding - - - 0.0000000000000000000000000000000000000000000009634 186.0
YYD2_k127_5763929_11 PFAM Single-stranded nucleic acid binding R3H K06346 - - 0.000000000000000000000000000000008958 136.0
YYD2_k127_5763929_12 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000001583 119.0
YYD2_k127_5763929_13 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000001009 98.0
YYD2_k127_5763929_14 FlgD Ig-like domain - - - 0.0000000000000000002338 105.0
YYD2_k127_5763929_15 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000000004616 76.0
YYD2_k127_5763929_16 Integral membrane protein TerC family - - - 0.00000000000007161 76.0
YYD2_k127_5763929_17 Protein of unknown function (DUF721) - - - 0.00000000004079 67.0
YYD2_k127_5763929_18 Evidence 5 No homology to any previously reported sequences - - - 0.0000001188 64.0
YYD2_k127_5763929_19 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000001909 56.0
YYD2_k127_5763929_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.3 8.991e-273 854.0
YYD2_k127_5763929_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004212 465.0
YYD2_k127_5763929_4 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008142 336.0
YYD2_k127_5763929_5 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001067 280.0
YYD2_k127_5763929_6 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003239 269.0
YYD2_k127_5763929_7 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000008413 229.0
YYD2_k127_5763929_8 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000000000000004216 199.0
YYD2_k127_5763929_9 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000002432 196.0
YYD2_k127_5768464_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 3.71e-208 658.0
YYD2_k127_5768464_1 Domain of unknown function (DUF4143) K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002196 273.0
YYD2_k127_5768464_3 - - - - 0.000000000000000002652 89.0
YYD2_k127_5768464_4 - - - - 0.0000000000005699 74.0
YYD2_k127_5768464_5 E1-E2 ATPase K17686 - 3.6.3.54 0.000000001043 59.0
YYD2_k127_5773464_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 3.618e-206 672.0
YYD2_k127_5773464_1 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 399.0
YYD2_k127_5773464_10 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000003782 87.0
YYD2_k127_5773464_11 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.000000000000000005877 96.0
YYD2_k127_5773464_12 Histidine kinase K00936,K01719,K01768,K02030,K02584,K10441,K13924,K20962 - 2.1.1.80,2.7.13.3,3.1.1.61,3.1.4.52,3.6.3.17,4.2.1.75,4.6.1.1 0.000000003142 71.0
YYD2_k127_5773464_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004464 407.0
YYD2_k127_5773464_3 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006874 370.0
YYD2_k127_5773464_4 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus K00057 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0047952,GO:0055114 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 326.0
YYD2_k127_5773464_5 FeS-containing Cyanobacterial-specific oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003673 289.0
YYD2_k127_5773464_6 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000002127 210.0
YYD2_k127_5773464_7 Glycerol-3-phosphate acyltransferase K08591 - 2.3.1.15 0.00000000000000000000000000000000000001447 161.0
YYD2_k127_5773464_8 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000000000000005819 115.0
YYD2_k127_5773464_9 helix_turn_helix, mercury resistance K19591,K22491 - - 0.000000000000000000000006384 109.0
YYD2_k127_5779764_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1285.0
YYD2_k127_5779764_1 PFAM glycosyl transferase family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 8.432e-245 783.0
YYD2_k127_5779764_10 Ompa motb domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006916 276.0
YYD2_k127_5779764_11 Domains HisKA, HATPase_c - - - 0.0000000000000000000000000000000000000000000000000000000000000000001592 243.0
YYD2_k127_5779764_12 Oxidoreductase NAD-binding domain K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000001872 198.0
YYD2_k127_5779764_13 Biotin-lipoyl like K03585 - - 0.00000000000000000000000000000000000000000000000001492 197.0
YYD2_k127_5779764_14 NapC/NirT cytochrome c family, N-terminal region K15876 - - 0.00000000000000000000000000000000000000000000003329 180.0
YYD2_k127_5779764_15 transmembrane transporter activity - - - 0.000000000000000000000000000000003069 148.0
YYD2_k127_5779764_16 endonuclease activity K07451 - - 0.00000000000000000000000000000000981 141.0
YYD2_k127_5779764_17 - - - - 0.0000000000000000000000000005958 129.0
YYD2_k127_5779764_18 OmpA family K02557 - - 0.00000000000000003535 98.0
YYD2_k127_5779764_19 protein conserved in bacteria - - - 0.0000000000000001527 88.0
YYD2_k127_5779764_2 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 1.107e-231 728.0
YYD2_k127_5779764_20 NHL repeat - - - 0.0000000007588 71.0
YYD2_k127_5779764_21 Belongs to the peptidase S8 family K14645 - - 0.0000001768 64.0
YYD2_k127_5779764_3 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 1.005e-203 643.0
YYD2_k127_5779764_4 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004148,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006103,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006520,GO:0006544,GO:0006546,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009058,GO:0009063,GO:0009069,GO:0009071,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015036,GO:0016054,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0017144,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019464,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036094,GO:0036211,GO:0042133,GO:0042135,GO:0042737,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0043648,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045250,GO:0045252,GO:0045254,GO:0046390,GO:0046395,GO:0046483,GO:0046496,GO:0046872,GO:0046914,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0065007,GO:0065008,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0097159,GO:0106077,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000866 616.0
YYD2_k127_5779764_5 AcrB/AcrD/AcrF family K03296 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 631.0
YYD2_k127_5779764_6 COG3387 Glucoamylase and related glycosyl K01178 - 3.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 550.0
YYD2_k127_5779764_7 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003924 476.0
YYD2_k127_5779764_8 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00627 GO:0003674,GO:0003824,GO:0004742,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016407,GO:0016417,GO:0016418,GO:0016740,GO:0016746,GO:0016747,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030523,GO:0031405,GO:0031406,GO:0032787,GO:0032991,GO:0033293,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045254,GO:0046390,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1902494,GO:1990204 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 466.0
YYD2_k127_5779764_9 Domain of unknown function DUF11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004476 386.0
YYD2_k127_5809007_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 2.255e-244 790.0
YYD2_k127_5809007_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 632.0
YYD2_k127_5809007_2 drug transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007214 555.0
YYD2_k127_5809007_3 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 372.0
YYD2_k127_5809007_4 PFAM NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000176 271.0
YYD2_k127_5809007_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000006489 174.0
YYD2_k127_5809007_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000004735 128.0
YYD2_k127_5809007_7 Trypsin-like serine protease - - - 0.0000000000000000000006346 107.0
YYD2_k127_5809007_8 - - - - 0.0002281 47.0
YYD2_k127_5832417_0 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119 424.0
YYD2_k127_5832417_1 56kDa selenium binding protein (SBP56) K17285 - - 0.00000000000000000000000000000000000000000000000000000000313 207.0
YYD2_k127_5835634_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 526.0
YYD2_k127_5835634_1 Pyridine nucleotide-disulphide oxidoreductase K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 405.0
YYD2_k127_5835634_10 Aminotransferase K00812,K22457 GO:0003674,GO:0003824,GO:0008483,GO:0016740,GO:0016769,GO:0047297 2.6.1.1,2.6.1.14 0.00000000000000000000000000000000000000000000000000000369 207.0
YYD2_k127_5835634_11 PFAM GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.00000000000000000000000000000000000000000000000004947 187.0
YYD2_k127_5835634_12 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K00082,K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000879 146.0
YYD2_k127_5835634_13 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000283 138.0
YYD2_k127_5835634_14 Transcriptional - - - 0.000000000000003169 85.0
YYD2_k127_5835634_15 Two component regulator propeller - - - 0.000000001409 70.0
YYD2_k127_5835634_16 bacterioferritin comigratory protein K03564 - 1.11.1.15 0.00000002304 63.0
YYD2_k127_5835634_17 Trypsin-like serine protease K01337 - 3.4.21.50 0.0000004274 62.0
YYD2_k127_5835634_18 - - - - 0.00002301 49.0
YYD2_k127_5835634_2 Major facilitator Superfamily K08217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 363.0
YYD2_k127_5835634_3 Metallopeptidase family M24 K01262,K01271 - 3.4.11.9,3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 337.0
YYD2_k127_5835634_4 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004385 317.0
YYD2_k127_5835634_5 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 297.0
YYD2_k127_5835634_6 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006171 293.0
YYD2_k127_5835634_7 Domain of unknown function (DUF3473) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006426 280.0
YYD2_k127_5835634_8 SMART phosphoesterase PHP domain protein K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000002349 216.0
YYD2_k127_5835634_9 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000002114 204.0
YYD2_k127_585225_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821,K03918,K07250,K13524 - 2.6.1.11,2.6.1.17,2.6.1.19,2.6.1.22,2.6.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 537.0
YYD2_k127_585225_1 cytochrome - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006459 270.0
YYD2_k127_585225_2 metal-dependent hydrolase with the TIM-barrel fold - - - 0.00000000000000000000000000000000000000000000000000000000001251 226.0
YYD2_k127_585225_3 protein secretion K20276 - - 0.0000000000003234 83.0
YYD2_k127_5859208_0 peroxiredoxin activity - - - 0.000000000000000000000000000000000000000000000000000000000006496 214.0
YYD2_k127_5859208_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000000000000002419 207.0
YYD2_k127_5859208_2 Disulphide bond corrector protein DsbC K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000258 180.0
YYD2_k127_5859208_3 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000000000000000001281 149.0
YYD2_k127_5862695_0 secretion ATPase, PEP-CTERM locus subfamily K02450 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001405 252.0
YYD2_k127_5862695_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000008787 215.0
YYD2_k127_5862695_2 Capsular exopolysaccharide family - - - 0.000000000000000002595 95.0
YYD2_k127_5862695_3 CobQ CobB MinD ParA nucleotide binding domain K08252,K13661,K16554,K16692 - 2.7.10.1 0.0000000000005512 82.0
YYD2_k127_5875580_0 PglZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002661 534.0
YYD2_k127_5875580_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 431.0
YYD2_k127_5875580_10 endonuclease activity K07451 - - 0.0000000000000000000004772 107.0
YYD2_k127_5875580_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 GO:0001676,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0003824,GO:0003989,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006417,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0009058,GO:0009317,GO:0009329,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0017148,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032787,GO:0032991,GO:0034248,GO:0034249,GO:0042759,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:0097159,GO:1901363,GO:1901576,GO:1902494,GO:1990234,GO:2000112,GO:2000113 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 355.0
YYD2_k127_5875580_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003042 276.0
YYD2_k127_5875580_4 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000008305 221.0
YYD2_k127_5875580_5 Transcriptional regulator sugar kinase K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000292 198.0
YYD2_k127_5875580_6 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772,K03783,K03815 - 2.4.2.1,2.4.2.28 0.000000000000000000000000000000000007816 147.0
YYD2_k127_5875580_7 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.00000000000000000000000000001099 125.0
YYD2_k127_5875580_8 PFAM Uncharacterised P-loop hydrolase UPF0079 K06925 - - 0.0000000000000000000000004738 110.0
YYD2_k127_5875580_9 Universal bacterial protein YeaZ K14742 - - 0.000000000000000000000002897 116.0
YYD2_k127_589644_0 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 497.0
YYD2_k127_589644_1 Phosphate transporter family K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004895 406.0
YYD2_k127_589644_10 COG0457 FOG TPR repeat - - - 0.0002926 54.0
YYD2_k127_589644_2 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 394.0
YYD2_k127_589644_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000003085 194.0
YYD2_k127_589644_4 phosphate transport regulator K07220 - - 0.000000000000000000000000000000000000000000000002823 180.0
YYD2_k127_589644_5 Glycosyl hydrolase-like 10 - - - 0.0000000000000000000000000000000000000000000001824 188.0
YYD2_k127_589644_6 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000008273 115.0
YYD2_k127_589644_7 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000003357 94.0
YYD2_k127_589644_9 Recombinase - - - 0.0000136 50.0
YYD2_k127_5910993_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004182 520.0
YYD2_k127_5910993_1 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 341.0
YYD2_k127_5910993_2 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000000000000000001975 164.0
YYD2_k127_5918616_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008193 441.0
YYD2_k127_5918616_1 - - - - 0.00000000000000000000000000000000000000000002072 177.0
YYD2_k127_5918616_2 DNA-binding transcription factor activity - - - 0.00000000000000000000000000000000000008374 145.0
YYD2_k127_5918616_3 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000003124 156.0
YYD2_k127_5918616_4 glyoxalase III activity - - - 0.0000000000000000000000000000000000007918 145.0
YYD2_k127_5918616_5 Protein of unknown function (DUF1579) - - - 0.00000000000000000000000000000004597 131.0
YYD2_k127_5919044_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 9.086e-260 823.0
YYD2_k127_5919044_1 ABC transporter K02021,K06147,K06148,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 514.0
YYD2_k127_5919044_10 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000001737 233.0
YYD2_k127_5919044_11 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000004722 213.0
YYD2_k127_5919044_12 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000004201 208.0
YYD2_k127_5919044_13 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000001392 202.0
YYD2_k127_5919044_14 involved in cell wall biogenesis - - - 0.00000000000000000000000000000000000000000000000001323 193.0
YYD2_k127_5919044_15 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000623 180.0
YYD2_k127_5919044_16 AMMECR1 K06990,K09141 - - 0.000000000000000000000000000000000000000000001504 180.0
YYD2_k127_5919044_17 PFAM glycosyl transferase family 9 K02843 - - 0.0000000000000000000000000000000000001809 159.0
YYD2_k127_5919044_18 Cytidylyltransferase-like - - - 0.00000000000000000000000000000000009003 150.0
YYD2_k127_5919044_2 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009202 303.0
YYD2_k127_5919044_20 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.0000000000000000000000002321 120.0
YYD2_k127_5919044_21 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000001288 97.0
YYD2_k127_5919044_22 Belongs to the small heat shock protein (HSP20) family - - - 0.000000000003133 74.0
YYD2_k127_5919044_23 Domain of unknown function (DUF4340) - - - 0.0000000006306 71.0
YYD2_k127_5919044_24 polysaccharide export K01991 - - 0.000000001943 65.0
YYD2_k127_5919044_25 PFAM glycosyl transferase family 9 - - - 0.0000002283 63.0
YYD2_k127_5919044_3 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001973 274.0
YYD2_k127_5919044_4 protocatechuate 3,4-dioxygenase activity K00449 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000000000000000000001919 246.0
YYD2_k127_5919044_5 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000000000000005068 241.0
YYD2_k127_5919044_6 Bacterial sugar transferase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000638 240.0
YYD2_k127_5919044_7 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000009418 241.0
YYD2_k127_5919044_8 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000005444 236.0
YYD2_k127_5919044_9 ABC-type uncharacterized transport system K01992 - - 0.000000000000000000000000000000000000000000000000000000000000005777 236.0
YYD2_k127_5919553_0 PFAM AMP-dependent synthetase and ligase K04110 - 6.2.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 348.0
YYD2_k127_5919553_1 Creatinine amidohydrolase K01470 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000001008 253.0
YYD2_k127_5919553_2 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000006356 176.0
YYD2_k127_5928434_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000852 573.0
YYD2_k127_5928434_1 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000005095 203.0
YYD2_k127_5928434_2 phosphoprotein phosphatase activity K14680 - 6.5.1.3 0.00000000000000000000000000000000000000000001482 173.0
YYD2_k127_5928434_3 cAMP biosynthetic process - - - 0.00001332 55.0
YYD2_k127_5928434_4 serine-type peptidase activity K01990,K08884,K12132,K18912 - 1.14.99.50,2.7.11.1 0.00009822 47.0
YYD2_k127_5945064_0 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005575 499.0
YYD2_k127_5945064_1 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 412.0
YYD2_k127_5945064_10 Helix-turn-helix domain - - - 0.0000000000006121 79.0
YYD2_k127_5945064_2 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002459 291.0
YYD2_k127_5945064_3 PFAM OmpA MotB domain protein K03286 - - 0.000000000000000000000000000000000000000000000000000000000000001953 242.0
YYD2_k127_5945064_4 PFAM glycosyl transferase family 9 K02843 - - 0.00000000000000000000000000000000000004202 166.0
YYD2_k127_5945064_5 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000104 153.0
YYD2_k127_5945064_6 radical SAM domain protein - - - 0.0000000000000000000000000000003813 133.0
YYD2_k127_5945064_7 L-threonylcarbamoyladenylate synthase K01465,K07479,K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061710,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87,3.5.2.3 0.0000000000000000000001564 110.0
YYD2_k127_5945064_8 Domain of unknown function (DUF1844) - - - 0.0000000000000000000015 98.0
YYD2_k127_5945064_9 Cupin domain - - - 0.000000000000000001707 97.0
YYD2_k127_5965149_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 2.607e-198 649.0
YYD2_k127_5965149_1 Putative neutral zinc metallopeptidase K06973 - - 0.000000000000000000000000000000000000000000000000000000002989 207.0
YYD2_k127_5965149_2 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000000000000000002802 214.0
YYD2_k127_5965149_3 - - - - 0.0000000000000000000000003559 120.0
YYD2_k127_5965149_4 lipolytic protein G-D-S-L family - - - 0.00000003602 65.0
YYD2_k127_5981061_0 CoA enzyme activase uncharacterised domain (DUF2229) - - - 0.0 1563.0
YYD2_k127_5981061_1 DEAD DEAH box helicase K03724 - - 8.567e-291 915.0
YYD2_k127_5981061_10 hydrolase activity, hydrolyzing O-glycosyl compounds K01337 - 3.4.21.50 0.000002725 49.0
YYD2_k127_5981061_2 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 595.0
YYD2_k127_5981061_3 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000306 265.0
YYD2_k127_5981061_4 TIGRFAM geranylgeranyl reductase K21401 - 1.3.99.38 0.0000000000000000000000000000000000000000000000000000000000000000001609 244.0
YYD2_k127_5981061_5 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000001726 241.0
YYD2_k127_5981061_6 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) K07069 - - 0.000000000000000000000000000002858 121.0
YYD2_k127_5981061_7 Response regulator receiver - - - 0.00000000000000000000000000004137 134.0
YYD2_k127_5981061_8 PFAM Response regulator receiver domain - - - 0.0000000000000001333 93.0
YYD2_k127_5981061_9 - - - - 0.0000000004952 65.0
YYD2_k127_5983916_0 Monomeric isocitrate dehydrogenase K00031 - 1.1.1.42 0.0 1039.0
YYD2_k127_5983916_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005153 394.0
YYD2_k127_5983916_2 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.000000000000000000000000000000000000000000000001123 190.0
YYD2_k127_6005189_0 DinB superfamily - - - 0.000000000000000000000000000005575 122.0
YYD2_k127_6005189_1 Sigma-70 region 2 K03088 - - 0.000000000000000000000004834 109.0
YYD2_k127_6005189_2 - - - - 0.0000000000002004 79.0
YYD2_k127_6005189_3 TonB dependent receptor - - - 0.000000005539 69.0
YYD2_k127_601105_0 Peptidase C39 family - - - 0.00000000000000000000000000000000000038 162.0
YYD2_k127_601105_1 CHAT domain K04771,K18546 - 3.4.21.107 0.0000000000000000000005896 112.0
YYD2_k127_601105_2 CAAX protease self-immunity K07052 - - 0.00000000000003073 83.0
YYD2_k127_6032155_0 pfam abc K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 323.0
YYD2_k127_6032155_1 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007942 323.0
YYD2_k127_6032155_2 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005087 303.0
YYD2_k127_6032155_3 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001438 289.0
YYD2_k127_6032155_4 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001449 263.0
YYD2_k127_6032155_5 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000004099 212.0
YYD2_k127_6032155_6 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0070930,GO:0071704,GO:0097159,GO:1901363,GO:1901564 - 0.000000000000000000000000000000000000000000000000455 179.0
YYD2_k127_6032155_7 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000008154 184.0
YYD2_k127_6032155_8 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000001618 175.0
YYD2_k127_6032155_9 Sporulation and spore germination - - - 0.00000000000000000000007789 109.0
YYD2_k127_6045942_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000522 509.0
YYD2_k127_6045942_1 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 338.0
YYD2_k127_6045942_2 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000007628 181.0
YYD2_k127_6045942_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000003789 126.0
YYD2_k127_6045942_4 haloacid dehalogenase-like hydrolase K01079 - 3.1.3.3 0.0000000000000000001386 97.0
YYD2_k127_6045942_5 PFAM Methylamine - - - 0.0000000000000000003192 95.0
YYD2_k127_6045942_6 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000000003932 92.0
YYD2_k127_6045942_7 - - - - 0.00000009584 54.0
YYD2_k127_6045942_8 Putative zinc-finger - - - 0.000001533 53.0
YYD2_k127_6047468_0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 8.197e-214 676.0
YYD2_k127_6047468_1 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 375.0
YYD2_k127_6047468_2 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 359.0
YYD2_k127_6047468_3 Cytochrome P460 - - - 0.00000000000000000000000000000000000000000000000006758 182.0
YYD2_k127_6047468_4 DoxX K15977 - - 0.0000000000000000000000000000202 130.0
YYD2_k127_6047468_5 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000002308 119.0
YYD2_k127_6047468_6 Proton-conducting membrane transporter K12141 - - 0.000004207 49.0
YYD2_k127_6065176_0 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III C terminal K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 484.0
YYD2_k127_6065176_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 465.0
YYD2_k127_6065176_10 MacB-like periplasmic core domain K02004 - - 0.000000000006979 68.0
YYD2_k127_6065176_11 CarboxypepD_reg-like domain - - - 0.0000000000176 80.0
YYD2_k127_6065176_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006963 423.0
YYD2_k127_6065176_3 Belongs to the peptidase S8 family K08651,K13274,K13276,K13277 - 3.4.21.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009256 435.0
YYD2_k127_6065176_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003985 396.0
YYD2_k127_6065176_5 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 324.0
YYD2_k127_6065176_6 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.000000000000000000000000000000000000002205 170.0
YYD2_k127_6065176_7 Domain of unknown function (DUF4386) - - - 0.00000000000000000000000000000000000001355 155.0
YYD2_k127_6065176_8 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000000000000000000000003618 152.0
YYD2_k127_6065176_9 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000001623 129.0
YYD2_k127_6069128_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.216e-245 801.0
YYD2_k127_6069128_1 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005448 578.0
YYD2_k127_6069128_10 cell division ATP-binding protein FtsE K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000005052 247.0
YYD2_k127_6069128_11 NAD(P)H-binding K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000004171 239.0
YYD2_k127_6069128_13 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000001603 231.0
YYD2_k127_6069128_14 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000003718 234.0
YYD2_k127_6069128_15 Aminotransferase class I and II K14267 - 2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000001537 229.0
YYD2_k127_6069128_16 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000121 235.0
YYD2_k127_6069128_17 Peptidase family M23 K21471 GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000005266 220.0
YYD2_k127_6069128_18 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.00000000000000000000000000000000000000000001482 173.0
YYD2_k127_6069128_19 Aerotolerance regulator N-terminal - - - 0.0000000000000000000000000000000000000000001637 181.0
YYD2_k127_6069128_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003865 501.0
YYD2_k127_6069128_20 Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation K09811 - - 0.000000000000000000000000000000000000006722 157.0
YYD2_k127_6069128_21 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.00000000000000000000000000000002516 143.0
YYD2_k127_6069128_22 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.00000000000000000000000000000003665 140.0
YYD2_k127_6069128_23 peptidyl-prolyl isomerase K01802,K03769,K03770 - 5.2.1.8 0.000000000000000000000000000001472 136.0
YYD2_k127_6069128_24 ACT domain protein K00003,K00058,K01754,K04767 - 1.1.1.3,1.1.1.399,1.1.1.95,4.3.1.19 0.0000000000000000000000000009657 126.0
YYD2_k127_6069128_25 Protein of unknown function (DUF502) - - - 0.000000000000000000000000002425 119.0
YYD2_k127_6069128_26 Thiol disulfide interchange protein - - - 0.0000000000000000000000001539 119.0
YYD2_k127_6069128_27 amine dehydrogenase activity - - - 0.000000000000000000000106 113.0
YYD2_k127_6069128_28 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769,K03770 - 5.2.1.8 0.0000000000000000004106 102.0
YYD2_k127_6069128_3 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 427.0
YYD2_k127_6069128_30 Fibronectin type 3 domain - - - 0.000000000000002503 89.0
YYD2_k127_6069128_31 acid phosphatase activity K01727 - 4.2.2.1 0.000000000000003228 89.0
YYD2_k127_6069128_32 Evidence 5 No homology to any previously reported sequences - - - 0.000000001871 59.0
YYD2_k127_6069128_33 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000002587 64.0
YYD2_k127_6069128_34 FAD-NAD(P)-binding K01069 - 3.1.2.6 0.00000003026 59.0
YYD2_k127_6069128_35 Motility related/secretion protein - - - 0.000008924 57.0
YYD2_k127_6069128_36 Lipopolysaccharide assembly protein A domain K08992 - - 0.0008134 46.0
YYD2_k127_6069128_4 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005498 391.0
YYD2_k127_6069128_5 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005435 355.0
YYD2_k127_6069128_6 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 322.0
YYD2_k127_6069128_7 PFAM Integral membrane protein TerC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 316.0
YYD2_k127_6069128_8 PFAM Integral membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 301.0
YYD2_k127_6069128_9 Radical SAM domain protein K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000007075 266.0
YYD2_k127_6071094_0 phosphoserine phosphatase activity K01768,K07315 - 3.1.3.3,4.6.1.1 0.000000000000000000000000000000000000000001577 165.0
YYD2_k127_6071094_1 Uncharacterised protein family UPF0047 - GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.000004213 55.0
YYD2_k127_6080532_0 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000001607 217.0
YYD2_k127_6080532_1 Uncharacterized protein conserved in bacteria (DUF2237) K09966 - - 0.000000000000000000000000000000000000000000000004486 177.0
YYD2_k127_6080532_2 thiolester hydrolase activity K06889 - - 0.000000000000000002809 87.0
YYD2_k127_6087026_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 404.0
YYD2_k127_6087026_1 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000005762 258.0
YYD2_k127_6087026_2 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000008242 222.0
YYD2_k127_6087026_3 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000002601 166.0
YYD2_k127_6087026_4 Preprotein translocase subunit K03210 - - 0.00000000000000000003499 96.0
YYD2_k127_6087026_5 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000003356 92.0
YYD2_k127_6087026_6 AsmA family K07289 - - 0.0003771 54.0
YYD2_k127_6087187_0 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000538 249.0
YYD2_k127_6087187_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella K01195 - 3.2.1.31 0.000000000000000000000003892 119.0
YYD2_k127_6087187_2 May be involved in the transport of PQQ or its precursor to the periplasm K06136,K06167 - 3.1.4.55 0.00002068 48.0
YYD2_k127_6134150_0 - - - - 0.00000000000000000000000000000003344 134.0
YYD2_k127_6134150_1 - - - - 0.000000000000000002489 99.0
YYD2_k127_6153121_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005854 597.0
YYD2_k127_6153121_1 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006543 590.0
YYD2_k127_6153121_10 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007038 246.0
YYD2_k127_6153121_11 PFAM Uroporphyrinogen III synthase HEM4 K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000002289 196.0
YYD2_k127_6153121_12 Glycosyltransferase - - - 0.000000000000000000000000000000000000000000000000002531 201.0
YYD2_k127_6153121_13 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000006972 145.0
YYD2_k127_6153121_14 Las17-binding protein actin regulator - - - 0.00000000000000000000000003512 119.0
YYD2_k127_6153121_15 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000007813 115.0
YYD2_k127_6153121_2 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006094 532.0
YYD2_k127_6153121_3 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006753 507.0
YYD2_k127_6153121_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006822 509.0
YYD2_k127_6153121_5 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 460.0
YYD2_k127_6153121_6 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005684 346.0
YYD2_k127_6153121_7 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 343.0
YYD2_k127_6153121_8 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008674 333.0
YYD2_k127_6153121_9 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 329.0
YYD2_k127_6184546_0 thiolester hydrolase activity K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 436.0
YYD2_k127_6184546_1 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000264 61.0
YYD2_k127_6233561_0 Dimerisation domain of Zinc Transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008633 363.0
YYD2_k127_6233561_1 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit K01768,K07315 - 3.1.3.3,4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 351.0
YYD2_k127_6233561_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 331.0
YYD2_k127_6233561_3 PFAM FIST C domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001777 293.0
YYD2_k127_6233561_4 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000000000000000000002137 201.0
YYD2_k127_6243735_0 Domain of unknown function(DUF2779) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003559 433.0
YYD2_k127_6243735_1 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008146 334.0
YYD2_k127_6243735_2 RelA SpoT domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000005344 237.0
YYD2_k127_6243735_3 - - - - 0.00000000000000000000000000000001547 131.0
YYD2_k127_6243735_4 Protein tyrosine kinase - - - 0.000000000000000000000000342 108.0
YYD2_k127_6243735_5 cellulose binding K13735 - - 0.00000000000000000002847 94.0
YYD2_k127_6245057_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1364.0
YYD2_k127_6245057_1 OPT oligopeptide transporter protein - - - 1.307e-286 894.0
YYD2_k127_6245057_10 PrcB C-terminal - - - 0.00000000000000000142 94.0
YYD2_k127_6245057_11 - - - - 0.00000000008673 70.0
YYD2_k127_6245057_12 AcrB/AcrD/AcrF family K03296 - - 0.0000000008054 63.0
YYD2_k127_6245057_13 Chagasin family peptidase inhibitor I42 K14475 - - 0.00000001239 64.0
YYD2_k127_6245057_14 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.000001127 59.0
YYD2_k127_6245057_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC - - - 2.153e-238 752.0
YYD2_k127_6245057_3 Pirin C-terminal cupin domain K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005848 448.0
YYD2_k127_6245057_4 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11747 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008971 454.0
YYD2_k127_6245057_5 SERine Proteinase INhibitors - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000931 394.0
YYD2_k127_6245057_6 HlyD family secretion protein K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005957 331.0
YYD2_k127_6245057_7 OsmC-like protein K04063 - - 0.00000000000000000000000000000000000000005227 167.0
YYD2_k127_6245057_9 - - - - 0.00000000000000000000248 107.0
YYD2_k127_6257695_0 Fumarase C C-terminus K01679 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 546.0
YYD2_k127_6257695_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006798 428.0
YYD2_k127_6257695_2 tryptophan 2,3-dioxygenase activity K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008615 331.0
YYD2_k127_6257695_3 Domain of unknown function (DUF3943) - - - 0.00000000000000000000000000000000000000000000000000000000000000002114 248.0
YYD2_k127_6257695_4 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000001226 201.0
YYD2_k127_6257695_5 endonuclease activity K07451 - - 0.000000000000000000000000005365 122.0
YYD2_k127_6257695_6 - - - - 0.0000000000000004967 86.0
YYD2_k127_6257695_7 Tetratricopeptide repeat - - - 0.0000001126 64.0
YYD2_k127_626521_0 Surface antigen - - - 0.00000000002567 77.0
YYD2_k127_626521_1 Transcriptional regulator - - - 0.00001153 49.0
YYD2_k127_6274013_0 glucosamine-6-phosphate deaminase activity K01057,K02564 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 3.1.1.31,3.5.99.6 2.462e-278 876.0
YYD2_k127_6274013_1 phosphorelay signal transduction system K02481,K07713,K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004479 490.0
YYD2_k127_6274013_10 Glycine cleavage H-protein - - - 0.0000000000000000000000000000000000000000000000000001898 197.0
YYD2_k127_6274013_11 AraC-like ligand binding domain - - - 0.0000000000000000000000000000000007961 134.0
YYD2_k127_6274013_12 PFAM MgtC SapB transporter K07507 - - 0.00000000000000000000000000000006986 130.0
YYD2_k127_6274013_13 LVIVD repeat - - - 0.0000000000000000000000000004289 132.0
YYD2_k127_6274013_14 Peptidase family M54 K06974 - - 0.000000000000000000000003213 109.0
YYD2_k127_6274013_15 FlgD Ig-like domain K13669 - - 0.00000000001267 78.0
YYD2_k127_6274013_16 Glycosyl hydrolase family 70 K01142,K01176 - 3.1.11.2,3.2.1.1 0.00000000219 71.0
YYD2_k127_6274013_17 positive regulation of translation initiation in response to endoplasmic reticulum stress - - - 0.00008796 56.0
YYD2_k127_6274013_2 Bacterial Ig-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 472.0
YYD2_k127_6274013_3 Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 421.0
YYD2_k127_6274013_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008626 388.0
YYD2_k127_6274013_5 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007804 387.0
YYD2_k127_6274013_6 PFAM malic K00027,K00029 - 1.1.1.38,1.1.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 316.0
YYD2_k127_6274013_7 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005393 302.0
YYD2_k127_6274013_8 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002225 276.0
YYD2_k127_6274013_9 lipid kinase activity - - - 0.0000000000000000000000000000000000000000000000000000002935 204.0
YYD2_k127_6280888_0 Oligopeptide transporter OPT - - - 3.656e-286 893.0
YYD2_k127_6280888_1 OPT oligopeptide transporter protein - GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0008150,GO:0016020,GO:0022857,GO:0051179,GO:0051234,GO:0055085 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 482.0
YYD2_k127_6280888_10 - - - - 0.0000000000000007273 83.0
YYD2_k127_6280888_12 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.0000000005399 66.0
YYD2_k127_6280888_13 PFAM AhpC TSA family K03564 - 1.11.1.15 0.0000000005671 68.0
YYD2_k127_6280888_14 - - - - 0.00008683 54.0
YYD2_k127_6280888_15 cell redox homeostasis - - - 0.0003012 52.0
YYD2_k127_6280888_2 cytochrome C - - - 0.00000000000000000000000000000000000000000000000000001193 203.0
YYD2_k127_6280888_4 - - - - 0.00000000000000000000000000000000000000000001638 177.0
YYD2_k127_6280888_5 - - - - 0.0000000000000000000000000000000000000003119 165.0
YYD2_k127_6280888_7 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.000000000000000000000000000000000001087 156.0
YYD2_k127_6280888_8 Methyltransferase FkbM domain - - - 0.0000000000000000000005903 106.0
YYD2_k127_6280888_9 peptidase activity, acting on L-amino acid peptides K07752 - 3.4.17.22 0.00000000000000000006536 104.0
YYD2_k127_6291092_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0 1055.0
YYD2_k127_6291092_1 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 330.0
YYD2_k127_6291092_10 tRNA processing K06864 - - 0.000000001139 66.0
YYD2_k127_6291092_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008223 284.0
YYD2_k127_6291092_3 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000009017 252.0
YYD2_k127_6291092_4 phosphoserine phosphatase activity K01768,K07315 - 3.1.3.3,4.6.1.1 0.000000000000000000000000000000000000000000000000003276 206.0
YYD2_k127_6291092_5 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000554 125.0
YYD2_k127_6291092_6 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000006447 116.0
YYD2_k127_6291092_7 STAS domain K04749 - - 0.00000000000000000006295 103.0
YYD2_k127_6291092_8 sigma factor antagonist activity K04757,K06379,K08282,K17752 - 2.7.11.1 0.00000000000000002198 87.0
YYD2_k127_6291092_9 zinc ion binding K06204 - - 0.0000000000000002295 87.0
YYD2_k127_6314331_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 9.245e-202 632.0
YYD2_k127_6314331_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 582.0
YYD2_k127_6314331_10 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000000917 212.0
YYD2_k127_6314331_11 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000003834 206.0
YYD2_k127_6314331_12 Forms part of the polypeptide exit tunnel K02926 - - 0.0000000000000000000000000000000000000000000000000000003956 210.0
YYD2_k127_6314331_13 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000001273 182.0
YYD2_k127_6314331_14 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000004984 181.0
YYD2_k127_6314331_15 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000006744 160.0
YYD2_k127_6314331_16 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000002385 158.0
YYD2_k127_6314331_17 Binds to the 23S rRNA K02876 - - 0.0000000000000000000000000000000000000003805 156.0
YYD2_k127_6314331_18 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000000000000000000000000000000000002504 142.0
YYD2_k127_6314331_19 Involved in the binding of tRNA to the ribosomes K02946 GO:0001072,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0015935,GO:0019219,GO:0019222,GO:0019538,GO:0022626,GO:0022627,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0140110,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000002832 143.0
YYD2_k127_6314331_2 rRNA binding K02886 GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 381.0
YYD2_k127_6314331_20 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000002676 131.0
YYD2_k127_6314331_21 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000007997 121.0
YYD2_k127_6314331_22 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.00000000000000000000000000006993 118.0
YYD2_k127_6314331_23 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000003042 115.0
YYD2_k127_6314331_24 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000002871 102.0
YYD2_k127_6314331_25 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015934,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.00000000000000000000001961 103.0
YYD2_k127_6314331_26 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000003125 99.0
YYD2_k127_6314331_27 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) K02907 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000007283 79.0
YYD2_k127_6314331_28 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000002695 74.0
YYD2_k127_6314331_29 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000001826 65.0
YYD2_k127_6314331_3 Metallopeptidase family M24 K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 301.0
YYD2_k127_6314331_30 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000004404 50.0
YYD2_k127_6314331_4 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000271 282.0
YYD2_k127_6314331_5 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009194 254.0
YYD2_k127_6314331_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000000000000000000000001644 255.0
YYD2_k127_6314331_7 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000001005 233.0
YYD2_k127_6314331_8 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000002208 229.0
YYD2_k127_6314331_9 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0000027,GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000002984 222.0
YYD2_k127_6326601_0 peptidase S9 prolyl oligopeptidase active site - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 2.274e-292 912.0
YYD2_k127_6326601_1 membrane organization K07126,K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 604.0
YYD2_k127_6326601_10 - - - - 0.00000000000000000000000000000000001326 149.0
YYD2_k127_6326601_11 oligosaccharyl transferase activity - - - 0.000000000000000000001679 109.0
YYD2_k127_6326601_12 lipolytic protein G-D-S-L family - - - 0.000000000000003932 88.0
YYD2_k127_6326601_13 Non-essential cell division protein that could be required for efficient cell constriction K20276 - - 0.000000000000007497 88.0
YYD2_k127_6326601_14 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000904 56.0
YYD2_k127_6326601_2 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 420.0
YYD2_k127_6326601_3 Neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 343.0
YYD2_k127_6326601_4 phosphorelay signal transduction system K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005331 301.0
YYD2_k127_6326601_5 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003863 279.0
YYD2_k127_6326601_6 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000001127 185.0
YYD2_k127_6326601_7 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000002765 169.0
YYD2_k127_6326601_8 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000004424 154.0
YYD2_k127_6326601_9 regulatory protein LysR K21703 - - 0.00000000000000000000000000000000001226 147.0
YYD2_k127_6377603_0 Permease YjgP YjgQ family protein K07091,K11720 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 306.0
YYD2_k127_6377603_1 Permease YjgP YjgQ K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000002025 242.0
YYD2_k127_6377603_2 methyltransferase - - - 0.00000000000000000000000000000004132 144.0
YYD2_k127_666994_0 Amino acid permease - - - 1.066e-205 664.0
YYD2_k127_68487_0 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K05816,K10111,K10191 - 3.6.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000437 350.0
YYD2_k127_68487_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000109 177.0
YYD2_k127_68487_2 MotA/TolQ/ExbB proton channel family K03561,K03562 - - 0.00000000000000000000000000000000000000000009301 167.0
YYD2_k127_68487_3 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000005789 151.0
YYD2_k127_68487_4 Tetratricopeptide repeat - - - 0.00000000000000000194 97.0
YYD2_k127_68487_5 energy transducer activity K03832 - - 0.000000000000000002113 96.0
YYD2_k127_68487_6 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000001683 81.0
YYD2_k127_68487_7 Long-chain fatty acid transport protein K06076 - - 0.00009 55.0
YYD2_k127_71130_0 Heat shock 70 kDa protein K04043 - - 9.083e-277 864.0
YYD2_k127_71130_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008548 617.0
YYD2_k127_71130_10 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000532 239.0
YYD2_k127_71130_11 phosphoserine phosphatase activity K01768,K07315 - 3.1.3.3,4.6.1.1 0.0000000000000000000000000000000000000000000000002704 184.0
YYD2_k127_71130_12 - - - - 0.000000000002249 72.0
YYD2_k127_71130_13 - - - - 0.00000000001018 75.0
YYD2_k127_71130_14 lysyltransferase activity K07027 - - 0.0000000003607 72.0
YYD2_k127_71130_15 - - - - 0.00000000746 66.0
YYD2_k127_71130_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 589.0
YYD2_k127_71130_3 Zn_pept - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 535.0
YYD2_k127_71130_4 metal-dependent hydrolase with the TIM-barrel fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005396 509.0
YYD2_k127_71130_5 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008383 486.0
YYD2_k127_71130_6 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 453.0
YYD2_k127_71130_7 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 416.0
YYD2_k127_71130_8 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 365.0
YYD2_k127_71130_9 Poly A polymerase head domain K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007328 317.0
YYD2_k127_734148_0 Invasin, domain 3 K13735 - - 0.0000000000000000000419 106.0
YYD2_k127_734148_1 PFAM Carbohydrate-binding module 48 (Isoamylase N-terminal domain) - - - 0.000000000000000007363 87.0
YYD2_k127_734148_2 metal-dependent hydrolase of the TIM-barrel fold K07045 - - 0.000000000000000888 81.0
YYD2_k127_734148_3 PFAM glycoside hydrolase, family 13 domain protein - - - 0.000000002108 71.0
YYD2_k127_734148_4 PFAM glycoside hydrolase, family 13 domain protein - - - 0.000001283 58.0
YYD2_k127_739861_0 Regulator of chromosome condensation (RCC1) repeat - - - 0.000000000000000000001257 107.0
YYD2_k127_739861_1 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 0.000000003247 61.0
YYD2_k127_739861_2 domain protein - - - 0.000000005758 66.0
YYD2_k127_739861_3 TonB C terminal K03646 - - 0.0002397 52.0
YYD2_k127_790233_0 deacetylase - - - 0.00000000000000000000000000000001419 138.0
YYD2_k127_790233_1 Acetyltransferase (GNAT) domain - - - 0.000003969 59.0
YYD2_k127_813495_0 PFAM monooxygenase FAD-binding K20940 - 1.14.13.218 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 527.0
YYD2_k127_813495_1 Stress responsive A/B Barrel Domain - - - 0.000000000000000000000000000000004007 130.0
YYD2_k127_813495_2 - - - - 0.00000000001684 74.0
YYD2_k127_818185_0 Type II/IV secretion system protein K02283,K20527 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 534.0
YYD2_k127_818185_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008462 542.0
YYD2_k127_818185_10 type II secretion system protein K12511 - - 0.0000000000000000000000000000000000000000000000000000003701 204.0
YYD2_k127_818185_11 MotA TolQ ExbB proton channel K03561,K03562 - - 0.000000000000000000000000000000000000000000000000000002182 199.0
YYD2_k127_818185_12 PFAM 3-demethylubiquinone-9 K04750 - - 0.0000000000000000000000000000000000000000000000000003788 189.0
YYD2_k127_818185_13 type II secretion system protein K12510 - - 0.00000000000000000000000000000000000000000000000001314 197.0
YYD2_k127_818185_14 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000009099 191.0
YYD2_k127_818185_15 Flp pilus assembly protein, ATPase CpaE K02282 - - 0.00000000000000000000000000000000000000000000501 178.0
YYD2_k127_818185_16 PFAM SAF domain K02279 - - 0.00000000000000000000000000000000001072 148.0
YYD2_k127_818185_17 Domain of unknown function (DUF4956) - - - 0.0000000000000000000000000000000004991 146.0
YYD2_k127_818185_18 SdiA-regulated - - - 0.0000000000000000000000000000000005235 143.0
YYD2_k127_818185_19 - - - - 0.0000000000000000000001745 105.0
YYD2_k127_818185_2 membrane organization - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 529.0
YYD2_k127_818185_20 COG0848 Biopolymer transport protein K03559,K03560 - - 0.000000000000000000002058 98.0
YYD2_k127_818185_21 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000009562 102.0
YYD2_k127_818185_22 TIGRFAM TonB K03832 - - 0.0000000000004944 78.0
YYD2_k127_818185_23 PFAM Peptidase A24A, prepilin type IV K02278 - 3.4.23.43 0.00000000005437 71.0
YYD2_k127_818185_24 PFAM Flp Fap pilin component K02651 - - 0.000007789 49.0
YYD2_k127_818185_25 PFAM TadE family protein - - - 0.00001605 55.0
YYD2_k127_818185_26 SMART Tetratricopeptide repeat - - - 0.00004089 55.0
YYD2_k127_818185_27 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.0001232 53.0
YYD2_k127_818185_28 tail specific protease - - - 0.0002265 52.0
YYD2_k127_818185_29 PFAM Flp Fap pilin component K02651 - - 0.0005553 49.0
YYD2_k127_818185_3 OPT oligopeptide transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005955 428.0
YYD2_k127_818185_4 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 433.0
YYD2_k127_818185_5 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 298.0
YYD2_k127_818185_6 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000000000000000000000000000000000000000000000000002456 218.0
YYD2_k127_818185_7 glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.000000000000000000000000000000000000000000000000000000004642 201.0
YYD2_k127_818185_8 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000000001225 207.0
YYD2_k127_818185_9 Belongs to the GSP D family K02280 - - 0.0000000000000000000000000000000000000000000000000000001435 208.0
YYD2_k127_840007_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 314.0
YYD2_k127_840007_1 Two component regulator propeller K00936 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000107 246.0
YYD2_k127_840007_2 Transmembrane exosortase (Exosortase_EpsH) - - - 0.0000000000000000000000000000000000000000000000001512 188.0
YYD2_k127_840007_3 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000004032 176.0
YYD2_k127_840007_4 PFAM O-antigen polymerase - - - 0.000000000000000000000000000000000000000038 169.0
YYD2_k127_840007_5 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000663 141.0
YYD2_k127_840007_6 Protein of unknown function (DUF3485) - - - 0.00000000000000001698 96.0
YYD2_k127_840007_7 Phosphotransferase enzyme family - - - 0.00000000003432 75.0
YYD2_k127_844676_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000829 458.0
YYD2_k127_844676_1 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002799 399.0
YYD2_k127_844676_10 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.0000000000004698 68.0
YYD2_k127_844676_12 Outer membrane protein beta-barrel domain - - - 0.00000008725 63.0
YYD2_k127_844676_2 peroxidase activity K00435 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007039 321.0
YYD2_k127_844676_3 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000006012 273.0
YYD2_k127_844676_4 Pfam Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001132 265.0
YYD2_k127_844676_5 - - - - 0.000000000000000000000000000000000004731 152.0
YYD2_k127_844676_6 PAP2 superfamily - - - 0.0000000000000000000000000000000002818 141.0
YYD2_k127_844676_7 endonuclease containing a URI domain K07461 - - 0.0000000000000000000177 96.0
YYD2_k127_844676_8 His Kinase A (phosphoacceptor) domain - - - 0.000000000000001597 89.0
YYD2_k127_844676_9 Glycosyl hydrolase family 32 K01193 - 3.2.1.26 0.00000000000001141 83.0
YYD2_k127_845564_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 3.101e-266 846.0
YYD2_k127_845564_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0002682,GO:0002684,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006950,GO:0008150,GO:0009314,GO:0009380,GO:0009605,GO:0009607,GO:0009628,GO:0016020,GO:0032991,GO:0035821,GO:0042802,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0071944,GO:0075136,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000004367 243.0
YYD2_k127_845564_2 Helix-turn-helix domain - - - 0.000000000008122 72.0
YYD2_k127_858763_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 8.61e-197 645.0
YYD2_k127_858763_1 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 632.0
YYD2_k127_858763_2 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 440.0
YYD2_k127_858763_3 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004146 346.0
YYD2_k127_858763_4 Phosphoenolpyruvate phosphomutase - - - 0.00000000000000000000000000000000000000000000000000007102 200.0
YYD2_k127_861809_0 imidazolonepropionase activity K01443 - 3.5.1.25 4.081e-206 679.0
YYD2_k127_861809_1 imidazolonepropionase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 300.0
YYD2_k127_861809_2 Response regulator receiver domain K02658,K11523 - - 0.0002151 48.0
YYD2_k127_86205_0 polyribonucleotide nucleotidyltransferase activity K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 1.236e-230 736.0
YYD2_k127_86205_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 601.0
YYD2_k127_86205_2 Participates in both transcription termination and antitermination K02600 GO:0001000,GO:0001121,GO:0001125,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043175,GO:0043244,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003381 344.0
YYD2_k127_86205_3 Belongs to the peptidase M16 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000664 322.0
YYD2_k127_86205_4 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000001382 219.0
YYD2_k127_86205_5 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000006364 190.0
YYD2_k127_86205_6 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000004064 122.0
YYD2_k127_86205_7 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000294 104.0
YYD2_k127_86205_8 Protein of unknown function (DUF503) K09764 - - 0.00000000000000000000896 94.0
YYD2_k127_86205_9 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate K10206,K14261 - 2.6.1.83 0.000000000004794 68.0
YYD2_k127_911758_0 Belongs to the CarB family K01955 GO:0000050,GO:0000166,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016597,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.0 1116.0
YYD2_k127_911758_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 1.271e-312 980.0
YYD2_k127_911758_10 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000001512 154.0
YYD2_k127_911758_11 PFAM Divergent PAP2 family K09775 - - 0.0000000000000000000000000000002201 128.0
YYD2_k127_911758_12 Belongs to the peptidase S8 family - - - 0.000000000000000000000000005798 129.0
YYD2_k127_911758_13 Bacterial Ig-like domain (group 1) - - - 0.0000005205 63.0
YYD2_k127_911758_2 rieske 2Fe-2S domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006858 389.0
YYD2_k127_911758_3 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 312.0
YYD2_k127_911758_4 Protein kinase domain K08884 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009493 306.0
YYD2_k127_911758_5 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002035 304.0
YYD2_k127_911758_6 amino acid activation for nonribosomal peptide biosynthetic process K17713,K20952 - - 0.000000000000000000000000000000000000000000000000000000000000000195 250.0
YYD2_k127_911758_7 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000004348 211.0
YYD2_k127_911758_8 von Willebrand factor type A domain - - - 0.0000000000000000000000000000000000000000000000000000001517 222.0
YYD2_k127_911758_9 COG0183 Acetyl-CoA acetyltransferase K00626,K00632 - 2.3.1.16,2.3.1.9 0.00000000000000000000000000000000000000000000000000001842 203.0
YYD2_k127_933586_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006225 545.0
YYD2_k127_933586_1 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 309.0
YYD2_k127_933586_2 ACT domain K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001316 275.0
YYD2_k127_933586_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000002423 167.0
YYD2_k127_933586_4 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 0.0000000000000006563 77.0
YYD2_k127_948761_0 Subtilase family - - - 0.00000000000000000000000386 117.0
YYD2_k127_948761_1 glycosyl transferase - - - 0.00000002085 59.0
YYD2_k127_949331_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 2.602e-226 709.0
YYD2_k127_949331_1 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 612.0
YYD2_k127_949331_2 Alanine dehydrogenase/PNT, N-terminal domain K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007029 441.0
YYD2_k127_949331_3 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 439.0
YYD2_k127_949331_4 Protein of unknown function (DUF933) K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 385.0
YYD2_k127_949331_5 PUA domain containing protein K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006925 356.0
YYD2_k127_949331_6 EamA-like transporter family - - - 0.0000000000000000000002454 100.0
YYD2_k127_949331_7 Part of the multicomponent 3-phenylpropionate dioxygenase, that converts 3-phenylpropionic acid (PP) and cinnamic acid (CI) into 3-phenylpropionate-dihydrodiol (PP- dihydrodiol) and cinnamic acid-dihydrodiol (CI-dihydrodiol), respectively. This protein seems to be a 2Fe-2S ferredoxin K05710,K14750,K18087,K18089 GO:0003674,GO:0005488,GO:0006082,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009410,GO:0009987,GO:0016054,GO:0016999,GO:0017001,GO:0017144,GO:0018962,GO:0019380,GO:0019439,GO:0019752,GO:0032787,GO:0042178,GO:0042221,GO:0042537,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050896,GO:0051536,GO:0051537,GO:0051540,GO:0051716,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000002929 91.0