YYD3_k127_1014241_0
Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
K02274,K02298
-
1.10.3.10,1.9.3.1
6.966e-212
670.0
View
YYD3_k127_1014241_1
Exonuclease of the beta-lactamase fold involved in RNA processing
K07576
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162
529.0
View
YYD3_k127_1014241_2
Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)
K02275
-
1.9.3.1
0.0000000000000000000000000000000000000000000000000000000000000000000001427
264.0
View
YYD3_k127_1014241_3
cytochrome c oxidase subunit III
K02276
-
1.9.3.1
0.0000000000000000000000000000000000000000000000000000002876
203.0
View
YYD3_k127_1014241_4
signal sequence binding
K07152
-
-
0.0000000000000000000000000000000000000000000000000001453
211.0
View
YYD3_k127_1014241_5
Prokaryotic Cytochrome C oxidase subunit IV
K02277
-
1.9.3.1
0.00000000008542
72.0
View
YYD3_k127_1014241_6
Belongs to the peptidase S1C family
K04771
-
3.4.21.107
0.000002317
53.0
View
YYD3_k127_1034412_0
lyase activity
-
-
-
0.00000000000000000002544
106.0
View
YYD3_k127_1034412_1
Histidine kinase
-
-
-
0.0000000001636
63.0
View
YYD3_k127_107321_0
reductase
K00059
-
1.1.1.100
0.0000000000000000000000000000000000000000000000000000000000000000000003435
256.0
View
YYD3_k127_107321_2
Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
K02372
-
4.2.1.59
0.00000000000000000000176
99.0
View
YYD3_k127_107321_3
radical SAM domain protein
-
-
-
0.00000000000000000009413
91.0
View
YYD3_k127_107321_4
Carrier of the growing fatty acid chain in fatty acid biosynthesis
K02078
-
-
0.0000000000000007366
79.0
View
YYD3_k127_1083361_0
Transglycosylase
K05366,K21464
-
2.4.1.129,3.4.16.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573
563.0
View
YYD3_k127_111803_0
Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
K00763
-
6.3.4.21
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007544
417.0
View
YYD3_k127_111803_1
PFAM Isochorismatase
K08281
-
3.5.1.19
0.000000000000000000000000000000000000000000000000000000003168
206.0
View
YYD3_k127_111803_2
Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
K02434
GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564
6.3.5.6,6.3.5.7
0.0000000000000000000000000000000001045
139.0
View
YYD3_k127_111803_3
Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
K08963
GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
5.3.1.23
0.000000000000000000000000000000005402
132.0
View
YYD3_k127_111803_4
AsmA family
K07289,K07290
-
-
0.00000000000009386
86.0
View
YYD3_k127_111803_5
protein involved in outer membrane biogenesis
-
-
-
0.0000002745
64.0
View
YYD3_k127_1127043_0
Domain of unknown function (DUF362)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706
299.0
View
YYD3_k127_1127043_1
alginic acid biosynthetic process
-
-
-
0.0000000000000000000000000000000000000000000000000006729
194.0
View
YYD3_k127_1127043_2
ASPIC and UnbV
-
-
-
0.0000000000000000000000000000000000000000000005773
187.0
View
YYD3_k127_1127043_3
-
-
-
-
0.0000000000000001097
85.0
View
YYD3_k127_1127043_4
DeoR C terminal sensor domain
K02081
-
-
0.0002654
48.0
View
YYD3_k127_1138855_0
glutamate synthase
K00265,K00284
-
1.4.1.13,1.4.1.14,1.4.7.1
0.0
1258.0
View
YYD3_k127_1138855_1
DNA-3-methyladenine glycosylase
K01246
-
3.2.2.20
0.000000000000000000000000000004853
121.0
View
YYD3_k127_1141186_0
Oxidizes proline to glutamate for use as a carbon and nitrogen source
K13821
-
1.2.1.88,1.5.5.2
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416
566.0
View
YYD3_k127_1148820_0
PIN domain
K18828
-
-
0.0000000000000000000000000000000000000000002306
164.0
View
YYD3_k127_1148820_1
Polysaccharide biosynthesis/export protein
-
-
-
0.000000000000000000000000000000000001293
156.0
View
YYD3_k127_1148820_2
Capsule assembly protein Wzi
-
-
-
0.00000000000000000004099
98.0
View
YYD3_k127_1148820_3
Capsule assembly protein Wzi
-
-
-
0.000000000000000001855
96.0
View
YYD3_k127_1148820_4
-
-
-
-
0.000000000002035
70.0
View
YYD3_k127_1151305_0
-
-
-
-
0.00000000000000000000000000000000000000000000000005485
191.0
View
YYD3_k127_1151305_1
Protein of unknown function (DUF3417)
K00688
-
2.4.1.1
0.000000000000000000000000000000000000000000604
174.0
View
YYD3_k127_1151305_2
DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
K01972
GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360
6.5.1.2
0.0000003456
54.0
View
YYD3_k127_1183313_0
PFAM WD40 domain protein beta Propeller
-
-
-
1.318e-258
836.0
View
YYD3_k127_1183313_1
B12 binding domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000002204
238.0
View
YYD3_k127_1183313_2
PFAM WD40 domain protein beta Propeller
-
-
-
0.00000000000000000000000000007115
117.0
View
YYD3_k127_1194838_0
response regulator
K07712
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314
335.0
View
YYD3_k127_1194838_1
Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
K00788
-
2.5.1.3
0.000000000000000000000000000000000003689
156.0
View
YYD3_k127_1194838_2
phosphomethylpyrimidine kinase
K00941
-
2.7.1.49,2.7.4.7
0.000000000000000000002495
108.0
View
YYD3_k127_1194838_3
Psort location Cytoplasmic, score 9.97
K01761
GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0016740,GO:0016765,GO:0016829,GO:0016846
4.4.1.11
0.000004655
57.0
View
YYD3_k127_1218322_0
Patatin-like phospholipase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000759
253.0
View
YYD3_k127_1248282_0
Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
K01756
-
4.3.2.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003928
322.0
View
YYD3_k127_1248282_1
Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
K01952
-
6.3.5.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008072
304.0
View
YYD3_k127_1248282_2
Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
K01952
-
6.3.5.3
0.000000000000000000001751
97.0
View
YYD3_k127_1281180_0
Response regulator receiver
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000007845
240.0
View
YYD3_k127_1281180_1
Threonine aldolase
K01620
-
4.1.2.48
0.0000000000000000000000000000000000000000000000000002887
202.0
View
YYD3_k127_1281180_2
Glutamine amidotransferases class-II
K07008
-
3.5.1.118
0.000000000000902
78.0
View
YYD3_k127_1313666_0
Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
K01662
-
2.2.1.7
2.484e-224
720.0
View
YYD3_k127_1313666_1
Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
K03168
-
5.99.1.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004612
453.0
View
YYD3_k127_1313666_10
Peptidase family M23
K21471
-
-
0.00000000000000121
89.0
View
YYD3_k127_1313666_11
Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
K03602
-
3.1.11.6
0.00000000000001401
76.0
View
YYD3_k127_1313666_2
tail specific protease
K03797
-
3.4.21.102
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538
446.0
View
YYD3_k127_1313666_3
Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
K03601
-
3.1.11.6
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000124
294.0
View
YYD3_k127_1313666_4
Belongs to the FPP GGPP synthase family
K13789
-
2.5.1.1,2.5.1.10,2.5.1.29
0.0000000000000000000000000000000000000000000000000000000000000000000002843
253.0
View
YYD3_k127_1313666_5
TIGRFAM DNA protecting protein DprA
K04096
-
-
0.000000000000000000000000000000000000000000000000000000000000002877
231.0
View
YYD3_k127_1313666_6
FtsJ-like methyltransferase
K06442
-
2.1.1.226,2.1.1.227
0.0000000000000000000000000000000000000000000000000000003963
220.0
View
YYD3_k127_1313666_7
PFAM Peptidase M23
-
-
-
0.00000000000000000000000000000000000000000000002132
186.0
View
YYD3_k127_1313666_8
Divergent polysaccharide deacetylase
K09798
-
-
0.000000000000000000000000000000004506
148.0
View
YYD3_k127_1313666_9
LysM domain
-
-
-
0.0000000000000000000001568
111.0
View
YYD3_k127_1314556_0
Belongs to the ribulose-phosphate 3-epimerase family
K01783
-
5.1.3.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000001174
280.0
View
YYD3_k127_1314556_1
Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
K03500
-
2.1.1.176
0.00000000000000000000000000000000000000000000000000000000000000001937
236.0
View
YYD3_k127_1314556_2
LUD domain
-
-
-
0.000000000000000000000000000000000000000000000000000000001213
207.0
View
YYD3_k127_1314556_3
membrane transporter protein
K07090
-
-
0.00000000000000000000000001243
117.0
View
YYD3_k127_1314556_4
Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2)
K03183
-
2.1.1.163,2.1.1.201
0.0000000000000000000005141
97.0
View
YYD3_k127_1314556_5
Histidine kinase-like ATPases
-
-
-
0.0000005972
53.0
View
YYD3_k127_1326637_0
Ribonuclease E/G family
K08300,K08301
-
3.1.26.12
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000463
394.0
View
YYD3_k127_1326637_1
Peptidase U62 modulator of DNA gyrase
K03592
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008517
301.0
View
YYD3_k127_1326637_2
Acetyltransferase (GNAT) domain
K00619
-
2.3.1.1
0.00000000000000000000000000000000000000000000000000000954
192.0
View
YYD3_k127_1326637_3
Hydrolase
K07025
-
-
0.0000000000000000000000000000000000000001276
171.0
View
YYD3_k127_1328395_0
transporter of a GTP-driven Fe(2 ) uptake system
K04759
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049
400.0
View
YYD3_k127_1328395_1
Belongs to the Fur family
K03711
-
-
0.000000000000000000000000000000000003721
145.0
View
YYD3_k127_136280_0
Fibronectin-binding protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000007664
232.0
View
YYD3_k127_136280_1
Alpha/beta hydrolase family
-
-
-
0.000000000000000000000000000000000000000000002239
188.0
View
YYD3_k127_136280_2
PFAM glutaredoxin
K18917
-
1.20.4.3
0.000000000000000001951
87.0
View
YYD3_k127_1381340_0
transporter of a GTP-driven Fe(2 ) uptake system
K04759
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135
382.0
View
YYD3_k127_1381340_1
PFAM iron dependent repressor
K03709
-
-
0.0000000000000000000000000000000000000000000000000000001707
203.0
View
YYD3_k127_1381340_2
[2Fe-2S] binding domain
K03518,K13483
-
1.2.5.3
0.0000000000000000000000000000000000003224
150.0
View
YYD3_k127_1381340_3
Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
K17759
-
5.1.99.6
0.00000000000000000000002622
102.0
View
YYD3_k127_1381340_5
peptidyl-tyrosine sulfation
-
-
-
0.00004273
55.0
View
YYD3_k127_1388016_0
PFAM type II secretion system protein E
K02283,K03609
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005036
568.0
View
YYD3_k127_1388016_1
ATPase activity
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277
411.0
View
YYD3_k127_1388016_2
Type II secretion system
K12511
-
-
0.00000000000000000000000000000000000000000000000000000001019
209.0
View
YYD3_k127_1388016_3
Type II secretion system (T2SS), protein F
K12510
-
-
0.00000000000000000000000000000000000000000000000000000002686
226.0
View
YYD3_k127_1388016_4
AAA domain
K02282
-
-
0.000000000000000000000000000000000000000000000000000003827
210.0
View
YYD3_k127_1388016_5
Isoprenylcysteine carboxyl methyltransferase (ICMT) family
-
-
-
0.000000000000000000000001106
121.0
View
YYD3_k127_1388016_6
Uncharacterized ACR, COG1430
K09005
-
-
0.0000000000000000002194
96.0
View
YYD3_k127_1388016_7
TIGRFAM riboflavin biosynthesis protein RibF
K11753
-
2.7.1.26,2.7.7.2
0.0000000000000000007155
90.0
View
YYD3_k127_1388016_8
Putative Flp pilus-assembly TadE/G-like
-
-
-
0.000000000000000004927
89.0
View
YYD3_k127_1432497_0
Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
K00384,K03671,K22345
GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748
1.8.1.9,4.3.1.9
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209
388.0
View
YYD3_k127_1432497_1
Phospholipid N-methyltransferase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000004823
230.0
View
YYD3_k127_1432497_2
diguanylate cyclase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000004717
223.0
View
YYD3_k127_1432497_3
PFAM Cold-shock protein, DNA-binding
K03704
-
-
0.0000000000000000000000000001956
116.0
View
YYD3_k127_1432497_4
Rhodanese Homology Domain
-
-
-
0.000000000000002355
83.0
View
YYD3_k127_1464405_0
ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
K06942
-
-
0.000000000000000000000000000000000000000000000000000000000002837
230.0
View
YYD3_k127_1464405_1
N-acetylglucosaminylinositol deacetylase activity
K22135
-
-
0.000000000000000000000000000000000004397
149.0
View
YYD3_k127_1470574_0
Glycosyltransferase family 9 (heptosyltransferase)
K02843
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534
474.0
View
YYD3_k127_1470574_1
N-terminal domain of galactosyltransferase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006194
389.0
View
YYD3_k127_1470574_2
PFAM Glycosyl transferase family 2
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318
341.0
View
YYD3_k127_1470574_3
TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC
K01537
-
3.6.3.8
0.0000000000000000000000000003151
115.0
View
YYD3_k127_1470574_4
Lipid A biosynthesis
K02517
-
2.3.1.241
0.000000000002034
71.0
View
YYD3_k127_147797_0
WD40-like Beta Propeller Repeat
K03641,K08676
-
-
0.000000000000000000017
103.0
View
YYD3_k127_147797_1
Protein of unknown function (DUF1501)
-
-
-
0.00000000005027
75.0
View
YYD3_k127_1480382_0
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
K00648,K18003
-
2.3.1.180,2.3.1.262
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004254
404.0
View
YYD3_k127_1480382_1
Pyruvoyl-dependent arginine decarboxylase (PvlArgDC)
K02626
-
4.1.1.19
0.0000000000000000000000000000000000000000000000000000000000000000000000000000003831
268.0
View
YYD3_k127_1480382_2
Arginase family
K01480
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576
3.5.3.11
0.000000000000000000000000000000000000000000000000000000000000000000000000000004855
273.0
View
YYD3_k127_1480382_3
This enzyme acetylates the N-terminal alanine of ribosomal protein S18
K03789
-
2.3.1.128
0.000000000000000000000000006546
126.0
View
YYD3_k127_1480382_4
Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
K02823
-
-
0.000000000000000000004785
101.0
View
YYD3_k127_1489426_0
Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
-
-
-
0.000007234
53.0
View
YYD3_k127_1489426_1
Serine threonine protein kinase
-
-
-
0.00009741
55.0
View
YYD3_k127_1502271_0
FAD linked oxidases, C-terminal domain
K00104
-
1.1.3.15
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668
501.0
View
YYD3_k127_1502271_1
4Fe-4S dicluster domain
K11473
-
-
0.00000000000000000000000000000001926
140.0
View
YYD3_k127_1504214_0
PFAM 4-hydroxyphenylacetate 3-hydroxylase N terminal
K14534
-
4.2.1.120,5.3.3.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668
529.0
View
YYD3_k127_1504214_1
Periplasmic binding protein domain
K01999
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005783
474.0
View
YYD3_k127_1504214_2
Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
K00989
-
2.7.7.56
0.0000000000000000000000000000001183
131.0
View
YYD3_k127_1504214_3
AMP-binding enzyme C-terminal domain
-
-
-
0.00000002894
60.0
View
YYD3_k127_1513225_0
Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
K01689
-
4.2.1.11
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581
366.0
View
YYD3_k127_1513225_1
PFAM Rhomboid family
K07059
-
-
0.000000000000000000000000000000000000000000000000000000000000000001352
234.0
View
YYD3_k127_1513225_2
Universal stress protein
K06149
-
-
0.0000000000000000000000000000000003959
140.0
View
YYD3_k127_1513225_3
Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
K03530
-
-
0.0000000000000000000000000007632
116.0
View
YYD3_k127_1513225_4
Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
K03832
-
-
0.0000000000000002415
90.0
View
YYD3_k127_1529199_0
LemA family
K03744
-
-
0.0000000000000000000000000000000000000000000000000000000000003181
217.0
View
YYD3_k127_1529199_1
Belongs to the P(II) protein family
K04751
-
-
0.000000000000000000000000000000000000000000000000000000003042
200.0
View
YYD3_k127_1529199_2
TIGRFAM glutamine synthetase, type I
K01915
-
6.3.1.2
0.000000000000000000000000000000000000004694
152.0
View
YYD3_k127_1529199_3
ATPase (AAA superfamily
K07133
-
-
0.0000000000000000000000000000000000003524
142.0
View
YYD3_k127_1529199_4
TPM domain
K06872
-
-
0.00000000000000000000000000006347
127.0
View
YYD3_k127_1529199_5
nucleotidyltransferase activity
-
-
-
0.00000000000000000000003849
111.0
View
YYD3_k127_1553654_0
2-hydroxyglutaryl-CoA dehydratase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226
316.0
View
YYD3_k127_1553654_1
UvrD-like helicase C-terminal domain
K03656,K03657
-
3.6.4.12
0.0000000000000000000000000000000000000000000000000000000001166
212.0
View
YYD3_k127_1553654_2
Helix-turn-helix XRE-family like proteins
-
-
-
0.0000000000000000000000000000000000000000000007762
173.0
View
YYD3_k127_1553654_3
2-hydroxyglutaryl-CoA dehydratase, D-component
K04112,K20026
-
1.3.7.8,4.2.1.157
0.0000000000000000000000000000000000000008848
164.0
View
YYD3_k127_1553654_4
PFAM Pyruvate ketoisovalerate oxidoreductase
K00177
-
1.2.7.3
0.000000000000000000000000006322
113.0
View
YYD3_k127_1555634_0
1,4-alpha-glucan branching enzyme activity
K00700
-
2.4.1.18
0.0000000000000000002839
91.0
View
YYD3_k127_1558421_0
Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
K02433
-
6.3.5.6,6.3.5.7
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136
605.0
View
YYD3_k127_1558421_1
Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
K02434
GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564
6.3.5.6,6.3.5.7
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338
441.0
View
YYD3_k127_1558421_2
THUMP
K07444,K12297
-
2.1.1.173,2.1.1.264
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174
365.0
View
YYD3_k127_1558421_3
Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
K02435
-
6.3.5.6,6.3.5.7
0.0000000000000000000000002734
110.0
View
YYD3_k127_1558421_4
Protein of unknown function (DUF1059)
-
-
-
0.00000000005572
69.0
View
YYD3_k127_1558421_5
Uncharacterised protein family UPF0066
-
-
-
0.00001247
53.0
View
YYD3_k127_1561829_0
transglycosylase
K08309
-
-
0.000000000000000000000001362
120.0
View
YYD3_k127_1561829_1
Glycosyl hydrolase family 3 N terminal domain
K01207
-
3.2.1.52
0.000000000000000000001314
100.0
View
YYD3_k127_1577982_0
Catalyzes the ferrous insertion into protoporphyrin IX
K01772
GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
4.99.1.1,4.99.1.9
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001409
291.0
View
YYD3_k127_1577982_1
Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
K00231
-
1.3.3.15,1.3.3.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000008602
276.0
View
YYD3_k127_1577982_2
Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
K01599
GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
4.1.1.37
0.00000001203
56.0
View
YYD3_k127_1636739_0
Participates in both transcription termination and antitermination
K02600
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004717
432.0
View
YYD3_k127_1636739_1
Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
K00254,K02823,K17828
GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
1.3.1.14,1.3.5.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075
357.0
View
YYD3_k127_1636739_2
Required for maturation of 30S ribosomal subunits
K09748
-
-
0.00000000000000000000000000000000000001303
151.0
View
YYD3_k127_1636739_3
Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
K00528,K02823
-
1.18.1.2,1.19.1.1
0.00000000000000005406
82.0
View
YYD3_k127_1636739_4
Protein of unknown function (DUF448)
K07742
-
-
0.00000002877
61.0
View
YYD3_k127_1636739_5
One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
K02519
-
-
0.0001595
51.0
View
YYD3_k127_1649291_0
Mechanosensitive ion channel
K03442
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009629
413.0
View
YYD3_k127_1649291_1
TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3
K01838
-
5.4.2.6
0.00000000000000000000000000000000000000000000000000000000000000000000004624
248.0
View
YYD3_k127_1649291_2
thiamine pyrophosphate protein TPP binding domain protein
K01652
-
2.2.1.6
0.0000000000000000000000000000000000000000000000000000000000000000003112
233.0
View
YYD3_k127_1649291_3
Selenoprotein B glycine betaine sarcosine D-proline reductase
K10794
-
1.21.4.1
0.000000000000000000000000000000000000000000000000002297
188.0
View
YYD3_k127_1649291_4
-
-
-
-
0.00000000000000000000000000000000004228
141.0
View
YYD3_k127_1649291_5
ACT domain
K01653,K16785
GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234
2.2.1.6
0.000000000000000000000000456
118.0
View
YYD3_k127_1649291_6
Heavy-metal resistance
-
-
-
0.000001332
60.0
View
YYD3_k127_1702198_0
nitric oxide reductase activity
K22405
-
1.6.3.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264
575.0
View
YYD3_k127_1702198_1
Protein of unknown function DUF47
K02039,K07220
GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186
-
0.0000000000000000000000000000000000000000000000000000000000000000000008936
243.0
View
YYD3_k127_1702198_2
ATP corrinoid adenosyltransferase
K19221
-
2.5.1.17
0.0000000000000000000000000000000000000000000000000000005096
202.0
View
YYD3_k127_1702198_3
PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase
-
-
-
0.000000000000000000000000000000000001025
152.0
View
YYD3_k127_1702198_4
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
K03793
-
1.5.1.33
0.0000000000000000000000000000000003568
140.0
View
YYD3_k127_1702198_5
PFAM Rubredoxin-type Fe(Cys)4 protein
-
-
-
0.0000000000000000000000002189
105.0
View
YYD3_k127_1702198_6
Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
K02036
-
3.6.3.27
0.00000000000000000006856
89.0
View
YYD3_k127_171642_0
Transketolase, pyrimidine binding domain
K00162,K00167
-
1.2.4.1,1.2.4.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621
444.0
View
YYD3_k127_171642_1
Dehydrogenase E1 component
K00161,K00166
-
1.2.4.1,1.2.4.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004728
346.0
View
YYD3_k127_171642_2
COGs COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344
309.0
View
YYD3_k127_171642_3
17 kDa outer membrane surface antigen
-
-
-
0.00002242
48.0
View
YYD3_k127_1725531_0
Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
K01952
-
6.3.5.3
5.213e-222
727.0
View
YYD3_k127_1725531_1
Catalyzes the oxidation of L-aspartate to iminoaspartate
K00278
-
1.4.3.16
6.799e-210
665.0
View
YYD3_k127_1725531_2
Domain of unknown function (DUF4124)
K08309
-
-
0.00000000000000000000000000000000000000000000000002303
185.0
View
YYD3_k127_1725531_3
Belongs to the CDP-alcohol phosphatidyltransferase class-I family
K00995
-
2.7.8.5
0.000000000000000000000000000000000000006964
160.0
View
YYD3_k127_1737565_0
Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
K03431
-
5.4.2.10
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007325
404.0
View
YYD3_k127_1737565_1
Pterin binding enzyme
K00796,K13941
-
2.5.1.15,2.7.6.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000006562
282.0
View
YYD3_k127_1737565_2
Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
K03798
-
-
0.0000000000000000000000000000000000000000000000000000000000000002697
224.0
View
YYD3_k127_1737565_3
Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
K18672
-
2.7.7.85
0.0000000000000000000000000000000000000000000000000000001558
204.0
View
YYD3_k127_1737565_4
YbbR-like protein
-
-
-
0.00000000000000000000000000001989
130.0
View
YYD3_k127_1764097_0
Domain of Unknown Function (DUF748)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553
528.0
View
YYD3_k127_1764097_1
major facilitator superfamily MFS_1
-
-
-
0.0000000000000000000000000002589
117.0
View
YYD3_k127_1783340_0
Doubled CXXCH motif (Paired_CXXCH_1)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000001152
243.0
View
YYD3_k127_1783340_1
oxidoreductase
-
-
-
0.0000000000000000000000000000000000000000000000000000179
205.0
View
YYD3_k127_1783340_2
Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
K05589
-
-
0.00000098
55.0
View
YYD3_k127_179079_0
Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor
K00833
-
2.6.1.62
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692
549.0
View
YYD3_k127_179079_1
Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
K01012,K16180
-
2.8.1.6,5.4.99.58
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000938
343.0
View
YYD3_k127_179079_2
Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
K00639,K00652
-
2.3.1.29,2.3.1.47
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008808
351.0
View
YYD3_k127_179079_3
Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
K01935
-
6.3.3.3
0.0000000000000000000000000000001271
134.0
View
YYD3_k127_1828960_0
COG1541 Coenzyme F390 synthetase
K01912
-
6.2.1.30
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009069
420.0
View
YYD3_k127_1828960_1
3-oxoacyl-[acyl-carrier-protein] synthase activity
K05551,K09458,K14667
-
2.3.1.179,2.3.1.235,2.3.1.260
0.000000000000000000000000000000000000000000000000000000000000006395
222.0
View
YYD3_k127_1828960_2
radical SAM domain protein
K07011,K22227
-
-
0.000000000000000000000000002071
114.0
View
YYD3_k127_1876195_0
Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
K01586
-
4.1.1.20
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086
481.0
View
YYD3_k127_1876195_1
Argininosuccinate lyase C-terminal
K01755
-
4.3.2.1
0.000000000000000000000000000000000000000000000000000000000000000000000007854
247.0
View
YYD3_k127_1909820_0
Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
K00943
GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
2.7.4.9
0.000000000000000000000000000000000000000000000000000000005494
205.0
View
YYD3_k127_1909820_1
Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen
K00525
-
1.17.4.1
0.000000000000000000000000000000000000000000000000009174
186.0
View
YYD3_k127_1909820_2
DNA polymerase III, delta'
K02341
-
2.7.7.7
0.000000000000000000000000000000000000004028
158.0
View
YYD3_k127_1909820_3
PSP1 domain protein
-
-
-
0.00005725
48.0
View
YYD3_k127_1910939_0
Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
K01486
-
3.5.4.2
0.0000000000000000000000000000000000000000000000962
175.0
View
YYD3_k127_1910939_1
Phospholipid methyltransferase
-
-
-
0.000000000000000000000000000000000000009821
154.0
View
YYD3_k127_1910939_2
Haem-degrading
-
-
-
0.00000000000000000000000000000000000001356
149.0
View
YYD3_k127_1910939_3
Multicopper oxidase
K22349
-
1.16.3.3
0.0000000000000001359
84.0
View
YYD3_k127_1910939_4
serine threonine protein kinase
-
-
-
0.0000000000000001607
93.0
View
YYD3_k127_192722_0
Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
K00982
-
2.7.7.42,2.7.7.89
3.192e-264
844.0
View
YYD3_k127_192722_1
Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
K00826
-
2.6.1.42
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949
426.0
View
YYD3_k127_192722_2
Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
K06920
-
6.3.4.20
0.00000000000000000000000000000000000000000000000000000000000000000000000004937
260.0
View
YYD3_k127_192722_3
Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
K10026
-
4.3.99.3
0.000000000000000000000000000000000000000000000000000000000000000001834
232.0
View
YYD3_k127_192722_4
Dimerisation domain of Zinc Transporter
K13283
-
-
0.000000000000000003004
100.0
View
YYD3_k127_2000879_0
Asparagine synthase, glutamine-hydrolyzing
K01953
-
6.3.5.4
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005691
342.0
View
YYD3_k127_2000879_1
Metallo-beta-lactamase superfamily
K06897
-
2.5.1.105
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006054
299.0
View
YYD3_k127_2000879_2
PFAM Glycosyl transferase, group 1
-
-
-
0.000000000000000000000000000000000001702
158.0
View
YYD3_k127_2000879_3
antiporter
-
-
-
0.0000000000000000000000000009088
114.0
View
YYD3_k127_204531_0
coenzyme F420-1:gamma-L-glutamate ligase activity
-
-
-
0.00000000000000000000000000000000001701
150.0
View
YYD3_k127_204531_1
-
-
-
-
0.000000000000000000000000002006
117.0
View
YYD3_k127_204531_2
Thioesterase
K01075
-
3.1.2.23
0.00000000000000000002633
104.0
View
YYD3_k127_204531_3
-
-
-
-
0.000000006102
62.0
View
YYD3_k127_2088375_0
TIGRFAM DNA polymerase III, alpha subunit
K02337
-
2.7.7.7
0.0
1178.0
View
YYD3_k127_2088375_1
Catalyzes the synthesis of GMP from XMP
K01951
GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
6.3.5.2
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005276
567.0
View
YYD3_k127_2088375_2
GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
K03665
-
-
0.000000000000001589
92.0
View
YYD3_k127_2103230_0
PEP-utilising enzyme, N-terminal
K02768,K08483,K11183
-
2.7.1.202,2.7.3.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226
584.0
View
YYD3_k127_2103230_1
Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
K00789
GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464
2.5.1.6
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003657
519.0
View
YYD3_k127_2103230_2
May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
K01251
-
3.3.1.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489
386.0
View
YYD3_k127_2103230_3
TIGRFAM phosphocarrier, HPr family
K11189
-
-
0.0000000000001725
72.0
View
YYD3_k127_2151595_0
B12 binding domain
-
-
-
1.575e-235
741.0
View
YYD3_k127_2151595_1
The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
K00325
-
1.6.1.2
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768
357.0
View
YYD3_k127_2151595_2
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
K03701
-
-
0.00004701
56.0
View
YYD3_k127_2175782_0
AMP-binding enzyme
K01897
-
6.2.1.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004
499.0
View
YYD3_k127_2175782_1
-
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000005765
263.0
View
YYD3_k127_2175782_2
Nitroreductase family
-
-
-
0.0000000000000000000000000000000001046
151.0
View
YYD3_k127_2175782_3
PFAM CBS domain containing protein
K06189
-
-
0.00000000000000000000000006753
121.0
View
YYD3_k127_2175782_4
LysM domain
-
-
-
0.0000000000002561
82.0
View
YYD3_k127_2175782_5
Cytochrome c554 and c-prime
-
-
-
0.0000000005655
69.0
View
YYD3_k127_2178421_0
Belongs to the class-I aminoacyl-tRNA synthetase family
K01883,K15526
GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
6.1.1.16,6.3.1.13
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555
386.0
View
YYD3_k127_2178421_1
TIGRFAM FeS cluster assembly scaffold protein NifU
K04488
-
-
0.000000000000000000000000000000000000000000000000001128
193.0
View
YYD3_k127_2178421_2
Beta-eliminating lyase
K04487
-
2.8.1.7
0.0000000000000000000000000000000000000000000000001472
181.0
View
YYD3_k127_2178421_3
Dimerisation domain
-
-
-
0.00001059
56.0
View
YYD3_k127_2178421_4
Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
-
-
-
0.00001984
53.0
View
YYD3_k127_220022_0
Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation
K06147,K11085
-
-
1.72e-196
644.0
View
YYD3_k127_220022_1
3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
K02527
-
2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15
0.00000000000000000000000000000000000000000000000000000000000000000000000000000003648
283.0
View
YYD3_k127_220022_2
Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
K00748
GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509
2.4.1.182
0.0000000000000000000000000000000000000000000000000000000000001362
224.0
View
YYD3_k127_2225618_0
EamA-like transporter family
-
-
-
0.000000000000000000000000007955
115.0
View
YYD3_k127_2225618_1
PFAM Nitroreductase
-
-
-
0.0000000000000000002512
100.0
View
YYD3_k127_2225618_2
Threonine synthase
K01733
-
4.2.3.1
0.00000004258
64.0
View
YYD3_k127_2243284_0
Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine
K04487
-
2.8.1.7
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315
441.0
View
YYD3_k127_2243284_1
Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
K00566
-
2.8.1.13
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625
365.0
View
YYD3_k127_2243284_2
Serine acetyltransferase, N-terminal
K00640
-
2.3.1.30
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004071
290.0
View
YYD3_k127_2243284_3
Transcriptional regulator
K13643
-
-
0.00000000000000000000000001184
123.0
View
YYD3_k127_2243284_4
Uncharacterized protein family UPF0004
K18707
-
2.8.4.5
0.00000000000000000003138
96.0
View
YYD3_k127_2243284_5
TIGRFAM competence protein ComEA helix-hairpin-helix repeat
K02237
-
-
0.000002199
53.0
View
YYD3_k127_2250163_0
CoA binding domain
K09181
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008345
518.0
View
YYD3_k127_2272831_0
PFAM Branched-chain amino acid transport system permease component
K01997
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127
350.0
View
YYD3_k127_2272831_1
PFAM ABC transporter
K01996
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001421
286.0
View
YYD3_k127_2272831_2
Belongs to the binding-protein-dependent transport system permease family
K01998
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000722
302.0
View
YYD3_k127_2272831_3
Amino acid amide ABC transporter ATP-binding protein 1, HAAT family
K01995
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000002803
278.0
View
YYD3_k127_2272831_4
PFAM Iron-containing alcohol dehydrogenase
-
-
-
0.000000000000000000000000000000000000000000000000000000000002029
216.0
View
YYD3_k127_2277475_0
Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
K03590
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008859
420.0
View
YYD3_k127_2277475_1
Belongs to the D-alanine--D-alanine ligase family
K01921
-
6.3.2.4
0.000000000000000000000000000000000000000000000000000000008236
205.0
View
YYD3_k127_2277475_2
Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
K03531
-
-
0.0000000000000000000000000000000000000000000000000000003063
201.0
View
YYD3_k127_2277475_3
POTRA domain, FtsQ-type
K03589
-
-
0.00000000000000000000000006077
117.0
View
YYD3_k127_2280383_0
Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
K03644
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576
2.8.1.8
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003273
323.0
View
YYD3_k127_2280383_1
Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
K02346
-
2.7.7.7
0.00000000000000000000000000000000000000000000000000000000000000000159
246.0
View
YYD3_k127_2280383_2
Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate
K03801
GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564
2.3.1.181
0.000000000000000000000000000000000000000000000000000003349
198.0
View
YYD3_k127_2280383_3
THUMP
-
-
-
0.000000000000000000000003046
108.0
View
YYD3_k127_2280383_4
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
K00658
-
2.3.1.61
0.0000000000007559
69.0
View
YYD3_k127_2294557_0
NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
K03495
GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363
-
2.28e-249
789.0
View
YYD3_k127_2294557_1
Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
K03650
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009404
327.0
View
YYD3_k127_2294557_2
Specifically methylates the N7 position of guanine in position 527 of 16S rRNA
K03501
GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360
2.1.1.170
0.00000000000000000000000002054
120.0
View
YYD3_k127_2311177_0
CDP-glucose 4,6-dehydratase
K01709
-
4.2.1.45
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102
501.0
View
YYD3_k127_2311177_1
Glucose-1-phosphate cytidylyltransferase
K00978
-
2.7.7.33
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009856
434.0
View
YYD3_k127_2311177_2
COG0500 SAM-dependent methyltransferases
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000003024
284.0
View
YYD3_k127_2311177_3
Enoyl-CoA hydratase/isomerase
K15866
-
5.3.3.18
0.000002675
49.0
View
YYD3_k127_2359266_0
Belongs to the class-II aminoacyl-tRNA synthetase family
K04567
-
6.1.1.6
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304
591.0
View
YYD3_k127_2359266_1
PCRF
K02836
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885
398.0
View
YYD3_k127_2359266_2
Transfers the fatty acyl group on membrane lipoproteins
K03820
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008713
337.0
View
YYD3_k127_2359266_3
metal-dependent phosphohydrolase 7TM intracellular region
K07037
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000957
254.0
View
YYD3_k127_2359266_4
Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
K07042
-
-
0.000000000000009742
86.0
View
YYD3_k127_2359266_5
TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family
K09808
-
-
0.000000000002993
67.0
View
YYD3_k127_2392887_0
Amino acid permease
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000002417
271.0
View
YYD3_k127_2392887_1
phosphinothricin N-acetyltransferase activity
-
-
-
0.00000000000000000000000000000000000000001075
162.0
View
YYD3_k127_2412975_0
response regulator
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000006625
281.0
View
YYD3_k127_2412975_1
response regulator
-
-
-
0.00000000000002504
81.0
View
YYD3_k127_2412975_2
Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
K07533
-
5.2.1.8
0.000004985
59.0
View
YYD3_k127_2412975_3
peptidyl-prolyl cis-trans isomerase activity
K03769,K07533,K20074
-
3.1.3.16,5.2.1.8
0.0001067
55.0
View
YYD3_k127_2471184_0
Belongs to the Glu Leu Phe Val dehydrogenases family
K00261,K00262
-
1.4.1.3,1.4.1.4
8.895e-236
736.0
View
YYD3_k127_2471184_1
Domain in cystathionine beta-synthase and other proteins.
K04767
-
-
0.00000000000000000001305
96.0
View
YYD3_k127_2476316_0
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
K21025
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093
357.0
View
YYD3_k127_2506825_0
COG1233 Phytoene dehydrogenase and related
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000663
357.0
View
YYD3_k127_2506825_1
MMPL family
K07003
-
-
0.00000000000000000000000000000000000000000000000000003175
203.0
View
YYD3_k127_2516416_0
radical SAM domain protein
K20444
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004479
364.0
View
YYD3_k127_2534153_0
Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
K14652
-
3.5.4.25,4.1.99.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704
561.0
View
YYD3_k127_2534153_1
Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
K00794
GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
2.5.1.78
0.0000000000000000000000000000000000000000000000000000000002399
206.0
View
YYD3_k127_2534153_2
Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
K03625
-
-
0.00000000000000000000000000003847
123.0
View
YYD3_k127_2534153_3
riboflavin synthase, alpha subunit
K00793
-
2.5.1.9
0.0000000000000000006171
88.0
View
YYD3_k127_2543251_0
A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
K02470
-
5.99.1.3
4.826e-292
919.0
View
YYD3_k127_2543251_1
-
-
-
-
0.00000000000000003124
87.0
View
YYD3_k127_2543251_2
Glutaredoxin
-
-
-
0.00000000000000513
81.0
View
YYD3_k127_2543251_3
Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
K02338
-
2.7.7.7
0.0000000000001597
72.0
View
YYD3_k127_2561608_0
Belongs to the EPSP synthase family. MurA subfamily
K00790
-
2.5.1.7
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809
471.0
View
YYD3_k127_2561608_1
IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
K02500
GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902
394.0
View
YYD3_k127_2561608_2
Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
K00013
-
1.1.1.23
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909
360.0
View
YYD3_k127_2561608_3
TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
K01814
GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
5.3.1.16
0.0000000000000000000000000000000000000000000000000000000000000000000000000786
260.0
View
YYD3_k127_2561608_4
IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
K02501
-
-
0.000000000000000000000000000000000000000000000000000000000000000006383
242.0
View
YYD3_k127_2561608_5
Imidazoleglycerol-phosphate dehydratase
K01693
GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
4.2.1.19
0.00000000000000000000000000000000000000000000000000000000006838
227.0
View
YYD3_k127_2561608_6
Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
K02493
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564
2.1.1.297
0.00000000000000000000000000000000000000000000000000000005179
205.0
View
YYD3_k127_2572436_0
Domain of unknown function (DUF4382)
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003034
315.0
View
YYD3_k127_2572436_1
Tetratricopeptide repeat
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000002593
288.0
View
YYD3_k127_2572436_2
Belongs to the MsrB Met sulfoxide reductase family
K07305
-
1.8.4.12
0.000000000000000000000000000000000000000000000000000000000000001914
224.0
View
YYD3_k127_2603496_0
Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
K03723
-
-
2.935e-283
924.0
View
YYD3_k127_2603496_1
Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
K03517
GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605
2.5.1.72
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006135
379.0
View
YYD3_k127_2603496_2
NAD-dependent glycerol-3-phosphate dehydrogenase domain protein
K00057
GO:0003674,GO:0003824,GO:0004367,GO:0006072,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0019637,GO:0044237,GO:0046167,GO:0052646,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901576
1.1.1.94
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818
320.0
View
YYD3_k127_2603496_3
Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
K00097,K22024
-
1.1.1.262,1.1.1.408,1.1.1.409
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679
319.0
View
YYD3_k127_2603496_4
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
K03701
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000003951
269.0
View
YYD3_k127_2603496_5
PFAM PpiC-type peptidyl-prolyl cis-trans isomerase
K03769,K03770
-
5.2.1.8
0.00000000000000000000000000000000000000000000000001487
191.0
View
YYD3_k127_2603496_6
Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
K03771
-
5.2.1.8
0.000000000004209
79.0
View
YYD3_k127_2603496_7
peptidylprolyl isomerase
K03770
-
5.2.1.8
0.0000148
58.0
View
YYD3_k127_2616721_0
Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
K03695
-
-
0.0
1032.0
View
YYD3_k127_2616721_1
Phosphoribosyl synthetase-associated domain
K00948
-
2.7.6.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272
433.0
View
YYD3_k127_2616721_2
Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
K00919
-
2.7.1.148
0.00000000000000000000000000000000000000000000000001583
190.0
View
YYD3_k127_2616721_3
The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
K01056
GO:0003674,GO:0003824,GO:0004045,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016787,GO:0016788,GO:0040007,GO:0044464,GO:0052689,GO:0071944,GO:0140098,GO:0140101
3.1.1.29
0.0000000000000000000000000000000000000000000000003678
183.0
View
YYD3_k127_2616721_4
Single-strand binding protein family
K03111
-
-
0.0000000000000000000000000000000006419
147.0
View
YYD3_k127_2616721_5
This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
K02897
-
-
0.00000000000000000000000000000001357
144.0
View
YYD3_k127_2616721_6
Could be involved in septation
K06412
-
-
0.00000000000000000000000000004079
124.0
View
YYD3_k127_2616721_7
Binds together with S18 to 16S ribosomal RNA
K02990
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904
-
0.0000000000000000001741
93.0
View
YYD3_k127_2620700_0
Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
K01885
-
6.1.1.17
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005363
306.0
View
YYD3_k127_2620700_1
Belongs to the MEMO1 family
K06990
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000328
273.0
View
YYD3_k127_26282_0
PAS domain
K13598
-
2.7.13.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005408
472.0
View
YYD3_k127_26282_1
two component, sigma54 specific, transcriptional regulator, Fis family
K13599
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008559
314.0
View
YYD3_k127_26282_2
Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis
K02535
-
3.5.1.108
0.000000000000000000000000000000000000000000000000000000000000000000001721
246.0
View
YYD3_k127_26282_3
Protein of unknown function (DUF2905)
-
-
-
0.00000000000000000003827
91.0
View
YYD3_k127_26282_4
Domain of unknown function (DUF4390)
-
-
-
0.0000000000002265
78.0
View
YYD3_k127_26282_5
Holliday junction DNA helicase ruvB C-terminus
K03551
GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496
3.6.4.12
0.00000000004067
64.0
View
YYD3_k127_2644316_0
Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
K02355
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732
375.0
View
YYD3_k127_2644316_1
Collagenase
K08303
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917
316.0
View
YYD3_k127_2667331_0
PFAM Radical SAM domain protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009172
525.0
View
YYD3_k127_2667331_1
Protein of unknown function, DUF547
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008652
306.0
View
YYD3_k127_2667331_2
Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
K00762
-
2.4.2.10
0.0000000000000000000000000000000000000000000000000000000000002753
217.0
View
YYD3_k127_2667331_3
-
-
-
-
0.0000000000000000005889
96.0
View
YYD3_k127_2667331_4
Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
K00764
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009536,GO:0040007,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
2.4.2.14
0.00003538
47.0
View
YYD3_k127_2670692_0
Histidyl-tRNA synthetase
K01892
-
6.1.1.21
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978
345.0
View
YYD3_k127_2670692_1
diguanylate cyclase
-
-
-
0.00000000000000000000000000000000000000000000000000000000001569
224.0
View
YYD3_k127_2670692_2
DNA internalization-related competence protein ComEC Rec2
K02238
-
-
0.00000000000000000000000007515
121.0
View
YYD3_k127_2674970_0
CoA-transferase family III
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332
449.0
View
YYD3_k127_2674970_1
Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
K03455
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003646
460.0
View
YYD3_k127_2674970_2
CoA-transferase family III
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093
391.0
View
YYD3_k127_2674970_3
Rubrerythrin
-
-
-
0.0008049
50.0
View
YYD3_k127_2696111_0
malic protein domain protein
K00027,K00029
-
1.1.1.38,1.1.1.40
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964
574.0
View
YYD3_k127_2696111_1
Myo-inositol-1-phosphate synthase
K01858
-
5.5.1.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006157
350.0
View
YYD3_k127_2696111_2
Psort location Cytoplasmic, score 8.96
K07133
-
-
0.0000000000000000000000000000000000000000000000000000004727
201.0
View
YYD3_k127_2696111_3
Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
K08591
-
2.3.1.15
0.000000000000000000000000000000000000001758
155.0
View
YYD3_k127_2696111_4
denitrification pathway
-
-
-
0.0000000000000000000000000000001434
139.0
View
YYD3_k127_2709928_0
Radical SAM superfamily
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007107
314.0
View
YYD3_k127_2709928_1
WbqC-like protein family
-
GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
-
0.00000000000000000000000000000000000000000000000000000000003985
224.0
View
YYD3_k127_2709928_2
Macrocin-O-methyltransferase (TylF)
-
-
-
0.00000000000000000000000000000000000000000005392
179.0
View
YYD3_k127_2709928_3
Methyltransferase domain
-
-
-
0.0000000001224
74.0
View
YYD3_k127_2713911_0
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
K03072,K12257
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768
532.0
View
YYD3_k127_2713911_1
PFAM phosphoesterase, RecJ domain protein
K07462
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114
437.0
View
YYD3_k127_2713911_2
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
K03074
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645
313.0
View
YYD3_k127_2713911_3
Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
K00773
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
2.4.2.29
0.00000000000000000000000000000000000000000000000000000000000000000001323
238.0
View
YYD3_k127_2713911_4
TIGRFAM preprotein translocase, YajC subunit
K03210
-
-
0.0000000000000000000000000000003932
126.0
View
YYD3_k127_2713911_5
Uncharacterized protein conserved in bacteria (DUF2062)
K09928
-
-
0.0000000006382
71.0
View
YYD3_k127_2716037_0
Type II secretion system (T2SS), protein E, N-terminal domain
K02454,K02652
GO:0003674,GO:0005488,GO:0005515,GO:0042802
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448
501.0
View
YYD3_k127_2716037_1
WD40-like Beta Propeller Repeat
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007503
298.0
View
YYD3_k127_2716037_2
-
-
-
-
0.0001177
51.0
View
YYD3_k127_2788885_0
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
K03070
GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004688
376.0
View
YYD3_k127_2788885_1
Belongs to the universal ribosomal protein uS2 family
K02967
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237
333.0
View
YYD3_k127_2788885_2
Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
K00620
GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
2.3.1.1,2.3.1.35
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003153
332.0
View
YYD3_k127_2788885_3
Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
K02357
GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000001221
280.0
View
YYD3_k127_2788885_4
Catalyzes the reversible phosphorylation of UMP to UDP
K09903
GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576
2.7.4.22
0.0000000000000000000000000000000000000000000000000000000000000000006264
233.0
View
YYD3_k127_279247_0
Iron-sulfur cluster-binding domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048
375.0
View
YYD3_k127_279247_1
Coenzyme PQQ synthesis protein D (PqqD)
-
-
-
0.0000000000000006512
84.0
View
YYD3_k127_279247_2
chaperone-mediated protein folding
K21007
-
-
0.0000000006399
61.0
View
YYD3_k127_28141_0
ATPase, P-type (transporting), HAD superfamily, subfamily IC
K01534
-
3.6.3.3,3.6.3.5
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004795
348.0
View
YYD3_k127_28141_1
Major Facilitator Superfamily
K08223
-
-
0.00000000000000000000000000000000000000000000000000000000001911
224.0
View
YYD3_k127_28141_2
Major facilitator Superfamily
K08223
-
-
0.00000000000000000000000000000000004976
144.0
View
YYD3_k127_28141_3
Major Facilitator Superfamily
-
-
-
0.000000008777
66.0
View
YYD3_k127_2825217_0
Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
K00817
-
2.6.1.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007213
343.0
View
YYD3_k127_2825217_1
PFAM Aminotransferase class I and II
K11358
-
2.6.1.1
0.0000000000000000000000000000000000000404
147.0
View
YYD3_k127_2825217_2
protein conserved in bacteria
-
-
-
0.0000000009374
59.0
View
YYD3_k127_2842928_0
Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
K01736
GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576
4.2.3.5
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656
381.0
View
YYD3_k127_2842928_1
type IV pilus secretin PilQ
K02666
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005972
309.0
View
YYD3_k127_2842928_2
Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
K01735
-
4.2.3.4
0.00000000000000000000000000000000000000000000000000000000000000000000001415
265.0
View
YYD3_k127_2842928_3
Catalyzes a trans-dehydration via an enolate intermediate
K03786
-
4.2.1.10
0.000000000000000000000000000000000000000007303
164.0
View
YYD3_k127_2842928_4
Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
K00891
GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0019438,GO:0019632,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615
2.7.1.71
0.000000000000000000000000000000003182
135.0
View
YYD3_k127_284662_0
trisaccharide binding
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004215
426.0
View
YYD3_k127_2846780_0
Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
K03147
-
4.1.99.17
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868
550.0
View
YYD3_k127_2846780_1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
K21025
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002991
329.0
View
YYD3_k127_2846780_2
PFAM Colicin V production protein
K03558
-
-
0.000000000004267
73.0
View
YYD3_k127_2846780_3
Thiamine monophosphate synthase
K00788
GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
2.5.1.3
0.00000006123
56.0
View
YYD3_k127_2857866_0
4Fe-4S dicluster domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006273
533.0
View
YYD3_k127_2857866_1
Acyl-CoA dehydrogenase, N-terminal domain
K00249
-
1.3.8.7
0.000000000000000000002581
93.0
View
YYD3_k127_2857866_2
PFAM ADP-ribosylglycohydrolase
-
-
-
0.00000000000002472
86.0
View
YYD3_k127_2865824_0
Belongs to the glycosyl hydrolase 13 family
K01214
-
3.2.1.68
2.212e-312
972.0
View
YYD3_k127_2865824_1
AAA ATPase
K07478
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379
491.0
View
YYD3_k127_2865824_2
Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
K00858
-
2.7.1.23
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008584
319.0
View
YYD3_k127_2865824_3
May be involved in recombinational repair of damaged DNA
K03631
-
-
0.00000000000000000000000000000007154
133.0
View
YYD3_k127_2904076_0
Protein of unknown function (DUF1722)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004193
370.0
View
YYD3_k127_2904076_1
Domain of unknown function (DUF1731)
K07071
-
-
0.000000000000000000000000000000000000000000611
175.0
View
YYD3_k127_2904076_2
Cytochrome c554 and c-prime
-
-
-
0.0000000000000000000000000000000000000004028
157.0
View
YYD3_k127_2905156_0
Conserved carboxylase domain
K01958
-
6.4.1.1
2.699e-219
721.0
View
YYD3_k127_2905156_1
TIGRFAM acetyl-CoA carboxylase, biotin carboxylase
K01959
-
6.4.1.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746
509.0
View
YYD3_k127_2905156_2
PFAM SAICAR synthetase
K01923
GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
6.3.2.6
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007432
395.0
View
YYD3_k127_2925406_0
peptidyl-lysine modification to peptidyl-hypusine
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003109
347.0
View
YYD3_k127_2925406_1
Penicillin-binding Protein dimerisation domain
K05515
-
3.4.16.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004346
340.0
View
YYD3_k127_2925406_2
Peptidoglycan polymerase that is essential for cell wall elongation
K05837
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000497
338.0
View
YYD3_k127_2925406_3
Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate
K03271
-
5.3.1.28
0.000000000000000000000000000000000000000000000000000002088
214.0
View
YYD3_k127_2925406_4
CoA binding domain
K06929
-
-
0.000000000000000000000000000000000000001799
151.0
View
YYD3_k127_2925406_5
Belongs to the thioredoxin family
K03671
-
-
0.00000000000000000000000000000000001567
139.0
View
YYD3_k127_293531_0
Fructose-1,6-bisphosphatase
K01622
-
3.1.3.11,4.1.2.13
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805
572.0
View
YYD3_k127_293531_1
Male sterility protein
K08679
-
5.1.3.6
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889
347.0
View
YYD3_k127_2940196_0
PFAM Na dependent nucleoside transporter
K03317
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009005
306.0
View
YYD3_k127_2940196_1
Belongs to the bacterial plant glucose-1-phosphate adenylyltransferase family
K00975
-
2.7.7.27
0.000000000000000000000000000000000000000000000000000000000000000000000000006736
261.0
View
YYD3_k127_2974829_0
Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
K00700
-
2.4.1.18
7.413e-254
796.0
View
YYD3_k127_2974829_1
PFAM 2-nitropropane dioxygenase NPD
K00459,K02371
-
1.13.12.16,1.3.1.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009714
439.0
View
YYD3_k127_2974829_2
Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
K01657
-
4.1.3.27
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751
379.0
View
YYD3_k127_2974829_3
Cytochrome P460
-
-
-
0.00000000000000000000000000000000000000000000000000004125
207.0
View
YYD3_k127_2974829_4
-
-
-
-
0.000000000000000000000000000000000000000000031
168.0
View
YYD3_k127_2974829_5
Domain of unknown function (DUF296)
-
-
-
0.00000000000000000000000000000001336
139.0
View
YYD3_k127_2974829_6
Metal-dependent hydrolases of the beta-lactamase superfamily I
K00784
-
3.1.26.11
0.00000000000000000000000000000008008
136.0
View
YYD3_k127_2985541_0
Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
K01151
GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360
3.1.21.2
0.000000000000000000000000000000000000000000000000000000000000002567
231.0
View
YYD3_k127_2985541_1
N-terminal domain of unknown function (DUF4140)
-
-
-
0.000000000000000000000005139
119.0
View
YYD3_k127_2985541_2
Protein of unknown function (DUF2889)
-
-
-
0.0001728
51.0
View
YYD3_k127_2997609_0
Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
K01881
-
6.1.1.15
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058
439.0
View
YYD3_k127_2997609_1
This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
K02358
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007122
354.0
View
YYD3_k127_2997609_2
Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
K01591
-
4.1.1.23
0.000000000000000000000000000000000000000000000000000000001301
216.0
View
YYD3_k127_2997609_3
Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
K03218
-
2.1.1.185
0.000000000000000000000000000000000000000215
158.0
View
YYD3_k127_2997609_4
-
-
-
-
0.0000000001439
63.0
View
YYD3_k127_3020535_0
PFAM asparagine synthase
K06864
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587
306.0
View
YYD3_k127_3020535_1
Probable molybdopterin binding domain
K03638,K03831
-
2.7.7.75
0.000000000000000000000000000000000000000000004188
169.0
View
YYD3_k127_3044524_0
PFAM natural resistance-associated macrophage protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124
479.0
View
YYD3_k127_3044524_1
cytochrome C family protein
-
-
-
0.000000000000000000000000000000000000004139
153.0
View
YYD3_k127_3044524_2
TIGRFAM NRAMP (natural resistance-associated macrophage protein) metal ion transporters
-
-
-
0.0000000000006818
69.0
View
YYD3_k127_3044524_3
glycoside hydrolase 15-related
K01178
-
3.2.1.3
0.00000000008091
64.0
View
YYD3_k127_3069985_0
TIGRFAM phosphate binding protein
K02040
GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007468
422.0
View
YYD3_k127_3069985_1
probably responsible for the translocation of the substrate across the membrane
K02037
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004488
378.0
View
YYD3_k127_3069985_2
PFAM Binding-protein-dependent transport system inner membrane component
K02038
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006
351.0
View
YYD3_k127_3069985_3
Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
K02036
-
3.6.3.27
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684
361.0
View
YYD3_k127_3069985_4
Part of the ABC transporter complex PstSACB involved in phosphate import
K02040
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335
347.0
View
YYD3_k127_3069985_5
histidine kinase HAMP region domain protein
K07636
-
2.7.13.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003875
302.0
View
YYD3_k127_3069985_6
Transcriptional regulatory protein, C terminal
K07658
-
-
0.000000000000000000000000000000000000000000000000000000000000000002503
234.0
View
YYD3_k127_3076157_0
Displays ATPase and GTPase activities
K06958
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000145
281.0
View
YYD3_k127_3076157_1
Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr)
K06023
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464
-
0.000000000000000000000000000000000000000000000000000000000000009146
221.0
View
YYD3_k127_3076157_2
PTS system fructose IIA component
K02793
-
2.7.1.191
0.0000000000000000000000000000007717
138.0
View
YYD3_k127_3078448_0
An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
K03595
-
-
0.00000000000000000000000000000000000000000000000000000000000000002131
242.0
View
YYD3_k127_3078448_1
Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
K03685
-
3.1.26.3
0.00000000000000000000000000000000000000009078
161.0
View
YYD3_k127_3089411_0
Aminotransferase class I and II
K10206,K14261
GO:0003674,GO:0003824,GO:0004021,GO:0006082,GO:0006090,GO:0006520,GO:0006522,GO:0006523,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009078,GO:0009079,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019272,GO:0019752,GO:0030632,GO:0032787,GO:0042851,GO:0042852,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046144,GO:0046145,GO:0046394,GO:0046416,GO:0046436,GO:0046437,GO:0047635,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
2.6.1.83
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837
563.0
View
YYD3_k127_3089411_1
Threonine synthase
K01733
-
4.2.3.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004415
522.0
View
YYD3_k127_3089411_2
Homoserine dehydrogenase
K00003
-
1.1.1.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008147
495.0
View
YYD3_k127_3089411_3
Proposed homoserine kinase
K15635
-
5.4.2.12
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003901
459.0
View
YYD3_k127_3089411_4
PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein
K00174,K00186
-
1.2.7.11,1.2.7.3,1.2.7.7
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009583
420.0
View
YYD3_k127_3089411_5
Bacterial fructose-1,6-bisphosphatase, glpX-encoded
K02446
-
3.1.3.11
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553
409.0
View
YYD3_k127_3089411_6
PFAM Thiamine pyrophosphate
K00175
-
1.2.7.11,1.2.7.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228
379.0
View
YYD3_k127_3089411_7
PFAM Pyruvate ketoisovalerate oxidoreductase
K00177
-
1.2.7.3
0.00000000000000000000000000000000000000000000000000331
199.0
View
YYD3_k127_3089411_8
Thioesterase-like superfamily
K07107
-
-
0.000000000000000000000000000001275
125.0
View
YYD3_k127_3089411_9
4 iron, 4 sulfur cluster binding
K00176,K05524
-
1.2.7.3
0.0000006615
62.0
View
YYD3_k127_3126985_0
PFAM peptidase U32
K08303
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117
350.0
View
YYD3_k127_3126985_1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007289
347.0
View
YYD3_k127_3126985_2
ADP-ribosylation factor family
K06883
GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004909
331.0
View
YYD3_k127_3126985_3
peptidase U32
K08303
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007473
303.0
View
YYD3_k127_3126985_4
PFAM Roadblock LC7 family protein
-
-
-
0.0000000000000000000000000000000000000000000000007954
179.0
View
YYD3_k127_3126985_5
Belongs to the binding-protein-dependent transport system permease family
K01995,K01998
-
-
0.000001761
53.0
View
YYD3_k127_3128096_0
Cytochrome c554 and c-prime
-
-
-
0.000000000000008822
82.0
View
YYD3_k127_3128096_2
PFAM UvrB UvrC protein
K08999,K19405,K19411
GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170
2.7.14.1
0.000001546
59.0
View
YYD3_k127_3128096_3
Histidine kinase
-
-
-
0.0001096
51.0
View
YYD3_k127_3140_0
Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
K00606
-
2.1.2.11
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959
328.0
View
YYD3_k127_3140_1
Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
K01918
GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605
6.3.2.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000003141
274.0
View
YYD3_k127_3140_2
Deoxynucleoside kinase
-
-
-
0.000000000000000000000000006803
111.0
View
YYD3_k127_316698_0
Leucyl-tRNA synthetase, Domain 2
K01869
GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.4
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292
483.0
View
YYD3_k127_316698_1
Lipopolysaccharide-assembly
-
-
-
0.00005948
56.0
View
YYD3_k127_3170060_0
B12 binding domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005195
504.0
View
YYD3_k127_3170060_1
Belongs to the pseudouridine synthase RluA family
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328
382.0
View
YYD3_k127_3170060_2
NUDIX domain
K01515
-
3.6.1.13
0.0000000000000000000000001272
107.0
View
YYD3_k127_3187611_0
PFAM sigma-54 factor interaction domain-containing protein
K02584
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688
428.0
View
YYD3_k127_3191086_1
3-oxoacyl-[acyl-carrier-protein] synthase activity
K05551,K09458,K14667
-
2.3.1.179,2.3.1.235,2.3.1.260
0.00000000000000000000000000000000000008716
151.0
View
YYD3_k127_3191881_0
POT family
K03305
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507
542.0
View
YYD3_k127_3191881_1
Thioredoxin
K03671
-
-
0.00000000000000000000000000000000000009324
146.0
View
YYD3_k127_3191881_2
hydroxymethylglutaryl-CoA reductase
K00021
-
1.1.1.34
0.0002171
48.0
View
YYD3_k127_320728_0
Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
K07082
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000008041
264.0
View
YYD3_k127_320728_1
Peptidase family S58
-
-
-
0.00000000000000000000000000000000000000000000000000000000008592
211.0
View
YYD3_k127_320728_2
Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
K07447
GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360
-
0.00000000000000000000000000000006293
131.0
View
YYD3_k127_320728_3
Prokaryotic dksA/traR C4-type zinc finger
K06204
-
-
0.0000000000000000000000000655
111.0
View
YYD3_k127_320728_4
Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12
K14441
-
2.8.4.4
0.000000000000000000000008699
106.0
View
YYD3_k127_320728_5
Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12
K14441
-
2.8.4.4
0.000000963
57.0
View
YYD3_k127_324871_0
Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
K03628
-
-
1.22e-206
649.0
View
YYD3_k127_324871_1
Responsible for synthesis of pseudouridine from uracil
K06180
GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360
5.4.99.23
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002204
299.0
View
YYD3_k127_324871_2
Belongs to the peptidase S1C family
K04771
GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564
3.4.21.107
0.0000000000000000000000000000001183
131.0
View
YYD3_k127_324871_3
Belongs to the multicopper oxidase YfiH RL5 family
K05810
-
-
0.0000000000000000000000000000002347
134.0
View
YYD3_k127_324871_4
-
-
-
-
0.000000000000000000000001384
105.0
View
YYD3_k127_324871_5
50S ribosomal protein L31
K02909
-
-
0.00000000000000000001148
106.0
View
YYD3_k127_324871_6
Diguanylate cyclase with GAF sensor
-
-
-
0.0000000000000000001213
100.0
View
YYD3_k127_3266627_0
Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
K01912
-
6.2.1.30
1.916e-203
643.0
View
YYD3_k127_3266627_1
ABC transporter
K01996
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208
299.0
View
YYD3_k127_3266627_2
Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
K07056
-
2.1.1.198
0.0000000000000000000000000000000000000000000000000000000000000000000000000000004741
272.0
View
YYD3_k127_3276890_0
TIGRFAM acetylornithine and succinylornithine
K00821
-
2.6.1.11,2.6.1.17
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198
404.0
View
YYD3_k127_3276890_1
Belongs to the argininosuccinate synthase family. Type 1 subfamily
K01940
GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
6.3.4.5
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819
362.0
View
YYD3_k127_3276890_2
Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
K00611,K09065
GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
2.1.3.3,2.1.3.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007521
345.0
View
YYD3_k127_3276890_3
Belongs to the acetylglutamate kinase family. ArgB subfamily
K00930
GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
2.7.2.8
0.00000000005895
63.0
View
YYD3_k127_3312802_0
Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
K03526
-
1.17.7.1,1.17.7.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002912
448.0
View
YYD3_k127_3312802_1
PFAM Silent information regulator protein Sir2
K12410
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000006331
278.0
View
YYD3_k127_3312802_2
Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
K01881
-
6.1.1.15
0.00000000000000000000000000000000000000000000000000009586
211.0
View
YYD3_k127_3312802_3
Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
K01881
-
6.1.1.15
0.000000000000000000000001309
103.0
View
YYD3_k127_3312802_4
sterol carrier protein
-
-
-
0.0000000000000005378
79.0
View
YYD3_k127_3338505_0
ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
K01338
-
3.4.21.53
1.03e-307
972.0
View
YYD3_k127_3338505_1
ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
K03686
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005844
423.0
View
YYD3_k127_3338505_2
PFAM MOFRL domain protein
K11529
-
2.7.1.165
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629
343.0
View
YYD3_k127_3338505_3
PFAM Nucleotidyl transferase
K00963
-
2.7.7.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282
347.0
View
YYD3_k127_3338505_4
SMART helicase c2
K03722
-
3.6.4.12
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004802
340.0
View
YYD3_k127_3338505_5
Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
K03705
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008564
316.0
View
YYD3_k127_3338505_6
SMART helicase c2
K03722
-
3.6.4.12
0.0000000000000000000000000000000000000004822
171.0
View
YYD3_k127_3338505_7
Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
K03687
GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363
-
0.0000000000000000000000000009278
130.0
View
YYD3_k127_3338505_8
Belongs to the small heat shock protein (HSP20) family
K13993
-
-
0.00000000007439
75.0
View
YYD3_k127_3338505_9
PFAM Extracellular ligand-binding receptor
K01999
-
-
0.000000003414
71.0
View
YYD3_k127_333990_0
Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
K01868
-
6.1.1.3
1.515e-251
791.0
View
YYD3_k127_333990_1
phenylalanine-tRNA ligase activity
K01889
GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.20
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115
422.0
View
YYD3_k127_333990_2
Protein of unknown function (DUF512)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147
345.0
View
YYD3_k127_333990_3
IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
K02520
-
-
0.000000000000000000000000000000000000000000000000000006887
203.0
View
YYD3_k127_333990_4
Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
K02887
GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904
-
0.0000000000000000000000000000000000000007447
153.0
View
YYD3_k127_333990_5
Belongs to the bacterial ribosomal protein bL35 family
K02916
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.0000000000002413
72.0
View
YYD3_k127_3351143_0
Iron/manganese superoxide dismutases, C-terminal domain
K04564
-
1.15.1.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009142
317.0
View
YYD3_k127_3351143_1
Signal transduction histidine kinase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000009405
234.0
View
YYD3_k127_3351143_2
two component, sigma54 specific, transcriptional regulator, Fis family
K07712
-
-
0.000000000000000000000000000271
123.0
View
YYD3_k127_3351143_3
PFAM ROSMUCR transcriptional regulator
-
-
-
0.000000000000000000000000008245
115.0
View
YYD3_k127_3351143_4
COG1960 Acyl-CoA dehydrogenases
K20035
-
-
0.0000000000000000000005019
104.0
View
YYD3_k127_3383395_0
Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
K00147
-
1.2.1.41
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005628
396.0
View
YYD3_k127_3383395_1
Tetratricopeptide repeat
-
-
-
0.000000000000000000000000000000000000000000001029
185.0
View
YYD3_k127_3383395_2
Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
K09710
-
-
0.00000000000000000000000000000000005128
139.0
View
YYD3_k127_3383395_3
Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
K00969
GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605
2.7.7.18
0.0000000000000000000000000000000001969
149.0
View
YYD3_k127_3383395_4
Phosphoribosyl transferase domain
-
-
-
0.0000000000000000009268
97.0
View
YYD3_k127_3415596_0
Belongs to the heme-copper respiratory oxidase family
K00404
-
1.9.3.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000615
346.0
View
YYD3_k127_3415596_1
PFAM cytochrome C oxidase mono-heme subunit FixO
K00405
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006337
332.0
View
YYD3_k127_3415596_2
PFAM CMP dCMP deaminase zinc-binding
-
-
-
0.000000000000000000003953
94.0
View
YYD3_k127_344653_0
Nitrogenase molybdenum-iron protein alpha chain
K02586
-
1.18.6.1
9.277e-284
876.0
View
YYD3_k127_344653_1
The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein
K02588
-
1.18.6.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007162
524.0
View
YYD3_k127_344653_2
PFAM sigma-54 factor interaction domain-containing protein
K02584
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005529
513.0
View
YYD3_k127_344653_3
ADP-ribosylglycohydrolase
K05521
-
3.2.2.24
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007355
390.0
View
YYD3_k127_344653_4
Dinitrogenase reductase ADP-ribosyltransferase (DRAT)
K05951
-
2.4.2.37
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892
342.0
View
YYD3_k127_344653_5
Histidine kinase
-
-
-
0.000000000000000000000000000000000000000000002514
172.0
View
YYD3_k127_344916_0
Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
K03086
-
-
0.00000000000000000000000000000000000000000000000000000000000000000002522
233.0
View
YYD3_k127_344916_1
Belongs to the GTP cyclohydrolase I type 2 NIF3 family
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000002345
239.0
View
YYD3_k127_344916_2
-
-
-
-
0.0006291
42.0
View
YYD3_k127_3475503_0
pilus organization
K07346
-
-
0.0000000000000000000000000000000000000000000000000000000000000001827
230.0
View
YYD3_k127_3475503_1
domain protein
K20276
-
-
0.0000000000000000000000000000000000000000000008382
180.0
View
YYD3_k127_3475503_2
metal cluster binding
K06940,K18475
-
-
0.00000000000000000000000000001018
126.0
View
YYD3_k127_3475503_3
Spore Coat Protein U domain
-
-
-
0.00000000002302
74.0
View
YYD3_k127_3475503_4
Spore Coat Protein U domain
-
-
-
0.00001474
53.0
View
YYD3_k127_348176_0
Dienelactone hydrolase family
K01061
-
3.1.1.45
0.0000000000000000000000000000000000000000000000000000000000000000000000001199
263.0
View
YYD3_k127_348176_1
Domain of Unknown Function (DUF748)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000001108
239.0
View
YYD3_k127_348176_2
Belongs to the ABC transporter superfamily
K02032
-
-
0.000000000000000000000000000000000000000000000000000000000000005981
225.0
View
YYD3_k127_3484831_0
PFAM extracellular solute-binding protein, family 5
K02035,K13893
-
-
1.827e-216
696.0
View
YYD3_k127_3484831_1
Anaphase-promoting complex, cyclosome, subunit 3
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004641
313.0
View
YYD3_k127_3510601_0
Belongs to the short-chain dehydrogenases reductases (SDR) family
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515
359.0
View
YYD3_k127_3510601_1
MMPL family
K07003
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009531
302.0
View
YYD3_k127_3510601_2
Ferritin-like domain
K03594
-
1.16.3.1
0.000000000000000000000000000000000000000000000000000000000002802
214.0
View
YYD3_k127_3510601_3
Peptidase family M48
-
-
-
0.0000000000000000000000007698
107.0
View
YYD3_k127_3510601_4
Glutaredoxin
K03676
-
-
0.0000000001592
63.0
View
YYD3_k127_3510601_5
PFAM Rubrerythrin
-
-
-
0.00001286
54.0
View
YYD3_k127_3510601_6
Bacterioferritin (cytochrome b1)
K03594
-
1.16.3.1
0.000351
51.0
View
YYD3_k127_3518207_0
Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
K01876
-
6.1.1.12
2.244e-242
768.0
View
YYD3_k127_3518207_1
PFAM tRNA synthetase, class II (G, H, P and S)
K01892
-
6.1.1.21
0.00000000000000000000002042
104.0
View
YYD3_k127_3527329_0
Sulphur transport
K07112
-
-
0.000000000000000000000000000000000000000000000000000000000000000000001094
249.0
View
YYD3_k127_3527329_1
ABC transporter, phosphonate, periplasmic substrate-binding protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000005964
238.0
View
YYD3_k127_3527329_2
Predicted permease
-
-
-
0.00000000000000000000000000000000000000000183
162.0
View
YYD3_k127_3527329_3
Outer membrane protein beta-barrel family
-
-
-
0.0000000000000000000000000002713
117.0
View
YYD3_k127_3531206_0
Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
K00097,K22024
-
1.1.1.262,1.1.1.408,1.1.1.409
0.00000000000000000000000000000000000007865
149.0
View
YYD3_k127_3531206_1
SurA N-terminal domain
K03769
-
5.2.1.8
0.000000000000000000004486
102.0
View
YYD3_k127_3531206_2
SurA N-terminal domain
K03771
-
5.2.1.8
0.00000000000000000003433
104.0
View
YYD3_k127_3556602_0
Collagenase
K08303
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268
346.0
View
YYD3_k127_35701_0
PFAM Glycosyltransferase family 28 C-terminal domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009816
404.0
View
YYD3_k127_35701_1
Glycosyl transferase, group 1
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000002698
231.0
View
YYD3_k127_3580388_0
Histidine kinase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000005438
285.0
View
YYD3_k127_3580388_1
helix_turn_helix, Lux Regulon
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000002165
242.0
View
YYD3_k127_3582693_0
very-long-chain-acyl-CoA dehydrogenase activity
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078
376.0
View
YYD3_k127_3582693_1
adenylylsulfate kinase activity
K00860,K00955
-
2.7.1.25,2.7.7.4
0.0000000000000000000000000000000000000009008
154.0
View
YYD3_k127_3582693_2
tRNA nucleotidyltransferase
K00970,K00974
-
2.7.7.19,2.7.7.72
0.0001643
51.0
View
YYD3_k127_3588183_0
Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
K00134
-
1.2.1.12
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009772
416.0
View
YYD3_k127_3588183_1
Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
K01803
-
5.3.1.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661
299.0
View
YYD3_k127_3588183_2
DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA
K05982
-
3.1.21.7
0.0000000000000000000000000000000000000000000000000000000004342
212.0
View
YYD3_k127_3588183_3
Preprotein translocase SecG subunit
K03075
-
-
0.000000000000000000000007793
105.0
View
YYD3_k127_3588183_4
'Cold-shock' DNA-binding domain
K03704
-
-
0.0000000001375
61.0
View
YYD3_k127_3624526_0
Carbamoyl-phosphate synthetase large chain domain protein
K01959,K01961
-
6.3.4.14,6.4.1.1,6.4.1.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009458
565.0
View
YYD3_k127_3624526_1
Belongs to the peptidase M24B family
K01262,K01271
GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0016787,GO:0019538,GO:0030145,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564
3.4.11.9,3.4.13.9
0.000000000000000000000000000000000000000000000000001102
189.0
View
YYD3_k127_3624526_2
Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
K02356
GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006417,GO:0006448,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072344,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112,GO:2000113,GO:2001124,GO:2001125
-
0.0000000000000000000000000000000000000000002336
160.0
View
YYD3_k127_3624526_3
first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
K02160
-
-
0.000000000000000000000000000000004692
134.0
View
YYD3_k127_3624526_4
Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
K02356
GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576
-
0.0000000000000000000000001146
111.0
View
YYD3_k127_3627313_0
PFAM major facilitator superfamily MFS_1
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000675
293.0
View
YYD3_k127_3627313_1
Tautomerase enzyme
K01821
-
5.3.2.6
0.0000000000000000000000000013
113.0
View
YYD3_k127_3627313_2
Putative diguanylate phosphodiesterase
-
-
-
0.000000000000005937
88.0
View
YYD3_k127_3627313_3
signal transduction histidine kinase
-
-
-
0.0000000005662
72.0
View
YYD3_k127_3632331_0
Belongs to the MurCDEF family
K02558
-
6.3.2.45
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319
426.0
View
YYD3_k127_3632331_1
Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
K07456
GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345
396.0
View
YYD3_k127_3632331_2
LD-carboxypeptidase
K01297
-
3.4.17.13
0.000000000000000000000000000000000000000000000000000000000000004651
229.0
View
YYD3_k127_3632331_3
Beta-lactamase
-
-
-
0.000000000000000000000000000000000000000000000000001593
205.0
View
YYD3_k127_3632331_4
cytochrome complex assembly
-
-
-
0.000000000000000000000000000000000000009173
154.0
View
YYD3_k127_3632331_5
cytochrome c biogenesis protein
-
-
-
0.000000000000005095
88.0
View
YYD3_k127_3638614_0
TatD related DNase
K03424
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004823
554.0
View
YYD3_k127_3638614_1
FAD dependent oxidoreductase
K07137
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786
442.0
View
YYD3_k127_3638614_2
nucleic acid binding
K03698
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003602
310.0
View
YYD3_k127_3638614_3
Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
K01874
-
6.1.1.10
0.000000000000000000000000000000000000000000000000000000000000000000000000004164
258.0
View
YYD3_k127_3638614_4
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
K00015
-
1.1.1.26
0.000000000000000000000000000000000000000000000000000000000000000000000002287
250.0
View
YYD3_k127_3638614_5
Late embryogenesis abundant protein
-
-
-
0.000004679
56.0
View
YYD3_k127_3651877_0
Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
K02015
-
-
0.0000000000000000000000000000000000000000000000000000000000000000002361
255.0
View
YYD3_k127_3651877_1
Periplasmic binding protein
K02016
-
-
0.0000000000000000000000000000000000000000000000000000004303
205.0
View
YYD3_k127_3651877_2
ATPase activity
K02013
-
3.6.3.34
0.000000000000000000000000000000000000000000000000003368
204.0
View
YYD3_k127_3651877_3
outer membrane cobalamin receptor
K02014,K16092
-
-
0.0000004912
59.0
View
YYD3_k127_3651877_4
TPR repeat
-
-
-
0.000000551
61.0
View
YYD3_k127_3671987_0
Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids
K11645
-
4.1.2.13
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516
335.0
View
YYD3_k127_3671987_1
Type II/IV secretion system protein
K02669
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061
317.0
View
YYD3_k127_3671987_2
3-dehydroquinate synthase (EC 4.6.1.3)
K11646
-
1.4.1.24
0.00000000000000000000000000000000000000000000000000000000000000000000000000000002518
286.0
View
YYD3_k127_3671987_3
Protein of unknown function (DUF3426)
-
-
-
0.0000000000000001752
92.0
View
YYD3_k127_3671987_4
Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
K03116
-
-
0.0000000000000007555
79.0
View
YYD3_k127_3682963_0
Ribosomal Proteins L2, C-terminal domain
K02886
GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007804
402.0
View
YYD3_k127_3682963_1
One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome
K02926
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000000000000001826
186.0
View
YYD3_k127_3682963_2
One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
K02892
GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000000000000001107
106.0
View
YYD3_k127_3682963_3
Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
K02965
-
-
0.0000000002613
61.0
View
YYD3_k127_3682999_0
PFAM 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861
366.0
View
YYD3_k127_3682999_1
prohibitin homologues
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009261
285.0
View
YYD3_k127_3682999_2
Uncharacterised protein family UPF0047
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000006434
251.0
View
YYD3_k127_3682999_3
Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
K00231
-
1.3.3.15,1.3.3.4
0.0000000000000000000000000000000000000000000000000000000434
201.0
View
YYD3_k127_3682999_4
-
-
-
-
0.000000001686
69.0
View
YYD3_k127_3721278_0
Belongs to the sigma-70 factor family. ECF subfamily
K03088
-
-
0.000000000000000000000000000000000000000000001821
171.0
View
YYD3_k127_3721278_1
UvrD/REP helicase N-terminal domain
K03657
-
3.6.4.12
0.0000000000000000000000000000000000000000006673
169.0
View
YYD3_k127_3721278_2
Putative zinc-finger
-
-
-
0.000004993
55.0
View
YYD3_k127_3721278_3
Magnesium chelatase, subunit ChlI
-
-
-
0.0003547
46.0
View
YYD3_k127_3736325_0
B12 binding domain
K00548
-
2.1.1.13
1.295e-245
785.0
View
YYD3_k127_3736325_1
Citrate synthase, C-terminal domain
K01647
-
2.3.3.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612
475.0
View
YYD3_k127_3740666_0
CoA binding domain
K09181
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467
534.0
View
YYD3_k127_3740666_1
'Cold-shock' DNA-binding domain
K03704
-
-
0.000000000000000000000002314
104.0
View
YYD3_k127_377223_0
Oxidizes proline to glutamate for use as a carbon and nitrogen source
K13821
-
1.2.1.88,1.5.5.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005772
452.0
View
YYD3_k127_377223_1
Sigma-54 interaction domain
K02481
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172
436.0
View
YYD3_k127_377223_2
Domains HisKA, HATPase_c
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000001833
251.0
View
YYD3_k127_3779010_0
Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
K00099
-
1.1.1.267
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000776
374.0
View
YYD3_k127_3779010_1
PDZ DHR GLGF domain protein
K11749
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241
365.0
View
YYD3_k127_3779010_2
PFAM aldo keto reductase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000276
270.0
View
YYD3_k127_3779010_3
Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
K00806
-
2.5.1.31
0.00000000000000000000000000000000000000000000000000000000000000000000000000005215
271.0
View
YYD3_k127_3779010_4
NmrA-like family
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000533
243.0
View
YYD3_k127_3779010_5
Ribosome recycling factor
K02838
GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576
-
0.0000000000000000000000000000000000000000000000000000000001074
213.0
View
YYD3_k127_3779010_6
PFAM phosphatidate cytidylyltransferase
K00981
-
2.7.7.41
0.00000000000000000000000000000000000003776
153.0
View
YYD3_k127_3779010_7
Glycoprotease family
K14742
-
-
0.0000000000000000000000000000000000001085
150.0
View
YYD3_k127_3779010_8
Catalyzes the reversible phosphorylation of UMP to UDP
K09903
GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576
2.7.4.22
0.00000000000000000000000000000000002699
136.0
View
YYD3_k127_3779010_9
dihydromethanopterin reductase activity
-
-
-
0.000000000000000000353
88.0
View
YYD3_k127_3784130_0
H( )-stimulated, divalent metal cation uptake system
K03322
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012
548.0
View
YYD3_k127_3784130_1
Chase2 domain
K01768
-
4.6.1.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005124
529.0
View
YYD3_k127_3784130_2
Alpha/beta hydrolase family
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007201
311.0
View
YYD3_k127_3784130_3
chlorophyll binding
K03286
-
-
0.00000000000000000000000000000000000003314
151.0
View
YYD3_k127_3784130_4
PFAM FecR protein
-
-
-
0.000000000000000000000000000004757
130.0
View
YYD3_k127_3787729_0
PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit
K01738,K01883,K12339
-
2.5.1.47,6.1.1.16
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789
440.0
View
YYD3_k127_3787729_1
nitrite sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004935
313.0
View
YYD3_k127_3787729_2
Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
K02302,K02303
-
1.3.1.76,2.1.1.107,4.99.1.4
0.000000000000000000000000000000000000000000000000000000000000000000000000001791
271.0
View
YYD3_k127_3787729_3
4Fe-4S binding domain
-
-
-
0.000000000000000000001156
96.0
View
YYD3_k127_3818548_0
Domain of unknown function (DUF362)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000161
258.0
View
YYD3_k127_3818548_1
alginic acid biosynthetic process
-
-
-
0.000000000000000000000000000000000000000000000000000000000001751
238.0
View
YYD3_k127_3818548_2
Beta-L-arabinofuranosidase, GH127
-
-
-
0.000000000000000000000000000000071
145.0
View
YYD3_k127_3818548_3
-
-
-
-
0.00000000000005104
86.0
View
YYD3_k127_3831009_0
homocysteine S-methyltransferase
K00297,K00547
-
1.5.1.20,2.1.1.10
3.667e-271
847.0
View
YYD3_k127_3831009_1
denitrification pathway
K02569,K15876
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006697
460.0
View
YYD3_k127_3831009_10
-
-
-
-
0.000000003335
57.0
View
YYD3_k127_3831009_2
B12 binding domain
K00548
-
2.1.1.13
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008442
341.0
View
YYD3_k127_3831009_3
Cytochrome c554 and c-prime
K03620
-
-
0.000000000000000000000000000000000000000000000000000000000000000001378
256.0
View
YYD3_k127_3831009_4
Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions
K02635
GO:0005575,GO:0005622,GO:0005623,GO:0009512,GO:0009579,GO:0016020,GO:0032991,GO:0034357,GO:0042651,GO:0044424,GO:0044436,GO:0044464,GO:0070069
-
0.00000000000000000000000000000000000000000000000000000001681
213.0
View
YYD3_k127_3831009_5
-
-
-
-
0.0000000000000000000000000000000000000000002615
161.0
View
YYD3_k127_3831009_6
The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
K02437
-
-
0.000000000000000000000000007646
128.0
View
YYD3_k127_3831009_7
Cytochrome b(C-terminal)/b6/petD
K00412
-
-
0.00000000000000000000001143
105.0
View
YYD3_k127_3831009_8
Rieske [2Fe-2S] domain
K02636
-
1.10.9.1
0.00000000000000000000004448
109.0
View
YYD3_k127_3831009_9
Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule
-
-
-
0.00000000000002266
84.0
View
YYD3_k127_3837298_0
GTP-binding protein TypA
K06207
-
-
4.686e-250
784.0
View
YYD3_k127_3837298_1
PFAM Polysulphide reductase, NrfD
K00185
-
-
8.246e-223
697.0
View
YYD3_k127_3837298_2
PFAM 4Fe-4S
K00184
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007204
516.0
View
YYD3_k127_3837298_3
Tripartite ATP-independent periplasmic transporter, DctM component
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000736
430.0
View
YYD3_k127_3837298_4
Belongs to the pirin family
K06911
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005819
443.0
View
YYD3_k127_3837298_5
PFAM peptidase S1 and S6, chymotrypsin Hap
K04771
-
3.4.21.107
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006241
369.0
View
YYD3_k127_3837298_6
Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000003136
267.0
View
YYD3_k127_3837298_7
Cytochrome c
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000001086
241.0
View
YYD3_k127_3837298_8
Rubrerythrin
-
-
-
0.00000003838
61.0
View
YYD3_k127_3838276_0
Cell wall formation
K01921
-
6.3.2.4
0.000000000000000000000000000000000000000000000000000000000000000000006682
246.0
View
YYD3_k127_3838276_1
Cell wall formation
K00075
-
1.3.1.98
0.0000000000000000000000000000000000000000000000000000000001703
214.0
View
YYD3_k127_3838276_2
Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
K03590
-
-
0.0000000000000000000000000000000000000000000000003129
180.0
View
YYD3_k127_3838276_3
Essential cell division protein
K03589
-
-
0.000000000000000000000000000000008603
138.0
View
YYD3_k127_3838276_4
Belongs to the MurCDEF family
K01924
-
6.3.2.8
0.0000000000000003299
79.0
View
YYD3_k127_3844617_0
TIGRFAM riboflavin biosynthesis protein RibF
K11753
-
2.7.1.26,2.7.7.2
0.000000000000000000000000000000000000000000000000000000000000000000000000001384
265.0
View
YYD3_k127_3844617_1
PFAM peptidase S1 and S6, chymotrypsin Hap
K04771,K04772
-
3.4.21.107
0.000000000000000000000000000000000000000000000000000000001025
222.0
View
YYD3_k127_3844617_2
PFAM permease YjgP YjgQ family protein
K07091
-
-
0.0000000000000000000000000000000000000000009299
171.0
View
YYD3_k127_3844617_3
PFAM permease YjgP YjgQ family protein
K11720
-
-
0.0000000000000000000000000000000001819
152.0
View
YYD3_k127_3845399_0
Flp pilus assembly protein RcpC/CpaB
K02279
-
-
0.000000000000000000000000000000000000000000007686
173.0
View
YYD3_k127_3845399_1
Belongs to the GSP D family
K02280
-
-
0.000000000000000004149
99.0
View
YYD3_k127_3845399_2
PFAM TadE family protein
-
-
-
0.0000005238
58.0
View
YYD3_k127_3847391_0
Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
K01703
-
4.2.1.33,4.2.1.35
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004304
550.0
View
YYD3_k127_3847391_1
Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
K01704
-
4.2.1.33,4.2.1.35
0.00000000000000000000000000000000000000000000000000000000000002938
236.0
View
YYD3_k127_3847391_2
Protein conserved in bacteria
-
-
-
0.000000000000000000001809
97.0
View
YYD3_k127_3847391_3
TIGRFAM asparagine synthase (glutamine-hydrolyzing)
K01953
-
6.3.5.4
0.000001032
53.0
View
YYD3_k127_3887575_0
Phosphoribosyl transferase domain
K00759
-
2.4.2.7
0.00000000000000000000000000000000000000000000000000000000000000000002401
238.0
View
YYD3_k127_3887575_1
heme binding
-
-
-
0.0000000000000000000000000000000007924
141.0
View
YYD3_k127_3887575_2
Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
K00573
-
2.1.1.77
0.00000000000001229
75.0
View
YYD3_k127_3887575_3
Helix-turn-helix domain
-
-
-
0.0005913
44.0
View
YYD3_k127_3895235_0
ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
K01338
-
3.4.21.53
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004645
308.0
View
YYD3_k127_3895235_1
AIR carboxylase
K06898
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003262
286.0
View
YYD3_k127_3895235_2
CBS domain containing protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000075
281.0
View
YYD3_k127_3895235_3
Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
K00946
-
2.7.4.16
0.000000000000000000000000000000000000000000000000000000000000000006778
241.0
View
YYD3_k127_3895235_4
Transporter associated domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000003782
246.0
View
YYD3_k127_3895235_5
Belongs to the LarC family
K09121
-
4.99.1.12
0.000000000000000000000000000000001118
135.0
View
YYD3_k127_3921300_0
Acyl-CoA dehydrogenase, C-terminal domain
-
-
-
2.828e-262
820.0
View
YYD3_k127_3921300_1
Lytic transglycosylase, SLT, LysM and LysM domain-containing
K08307
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909
323.0
View
YYD3_k127_3921300_2
TIGRFAM cysteine desulfurase family protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000005215
244.0
View
YYD3_k127_3921300_3
Chalcone isomerase-like
-
-
-
0.000000000000000000000000000000000000000000000000000005859
200.0
View
YYD3_k127_3921300_4
Putative RNA methylase family UPF0020
K15460
-
2.1.1.223
0.0000000000000000000000000000000000000000000003467
176.0
View
YYD3_k127_3921300_5
-
-
-
-
0.000000000000001567
84.0
View
YYD3_k127_3921300_6
Protein of unknown function (DUF3343)
-
-
-
0.00000000000009811
77.0
View
YYD3_k127_3921300_7
Protein of unknown function (DUF721)
-
-
-
0.0000002278
61.0
View
YYD3_k127_3984121_0
Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
K02835
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601
431.0
View
YYD3_k127_3984121_1
Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant
K03465
-
2.1.1.148
0.0000000000000000000000000000000000000000000000000000000000000000000000006583
263.0
View
YYD3_k127_3984121_2
Protein of unknown function (DUF1385)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000001739
243.0
View
YYD3_k127_3984121_3
Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
K03628
-
-
0.0000000000000000000000000000000000000000000000000000000000004403
212.0
View
YYD3_k127_3984121_4
Binds the 23S rRNA
K02909
-
-
0.000000000000000000000000007154
110.0
View
YYD3_k127_3991937_0
ABC-type polysaccharide polyol phosphate transport system ATPase component
K09691
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718
397.0
View
YYD3_k127_3991937_1
transferase activity, transferring glycosyl groups
K07011
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313
307.0
View
YYD3_k127_3991937_2
COG1682 ABC-type polysaccharide polyol phosphate export systems, permease component
K09690
-
-
0.000000007125
58.0
View
YYD3_k127_3992208_0
Belongs to the thiolase family
K00626
-
2.3.1.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226
341.0
View
YYD3_k127_3992208_1
Transcription regulator MerR DNA binding
K21902
-
-
0.0000000000000000000000000000000000007283
143.0
View
YYD3_k127_3992208_2
Tetratricopeptide repeat
-
-
-
0.00000000000000003318
92.0
View
YYD3_k127_3992208_3
Belongs to the thiolase family
K00626
-
2.3.1.9
0.00000000000007623
83.0
View
YYD3_k127_3992208_4
2-hydroxyglutaryl-CoA dehydratase, D-component
-
-
-
0.0002964
44.0
View
YYD3_k127_3992277_0
Mediates influx of magnesium ions
K03284
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475
358.0
View
YYD3_k127_3992277_1
Peptidase family M48
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008467
316.0
View
YYD3_k127_3992277_2
-
-
-
-
0.00000000000000000000000000000000000000000000000000001152
201.0
View
YYD3_k127_3992277_3
Cupin 2 conserved barrel domain
-
-
-
0.0000000000000000000000001702
111.0
View
YYD3_k127_3992277_4
aminopeptidase N
K01256
-
3.4.11.2
0.0000000000000000000004433
104.0
View
YYD3_k127_3992277_5
Pyridine nucleotide-disulphide oxidoreductase
-
-
-
0.000000000000000001979
94.0
View
YYD3_k127_4021148_0
Sugar (and other) transporter
K03446
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008447
500.0
View
YYD3_k127_4021148_1
Major Facilitator Superfamily
K08223
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000404
302.0
View
YYD3_k127_4021148_2
HlyD membrane-fusion protein of T1SS
K03543
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009804
286.0
View
YYD3_k127_4021148_3
lysyl-tRNA synthetase
K04568
-
-
0.000000000000000000000000000000000000000000000000000000000004248
220.0
View
YYD3_k127_4021148_4
Amidohydrolase
-
-
-
0.00000000000000000000000000000002212
145.0
View
YYD3_k127_4045693_0
Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
K00641
-
2.3.1.31
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002412
508.0
View
YYD3_k127_4045693_1
oxidoreductase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000003422
281.0
View
YYD3_k127_4045693_2
PFAM Mannitol dehydrogenase
K00040
-
1.1.1.57
0.0000000000000000000000000000000000007499
147.0
View
YYD3_k127_4045693_3
Including oxidative damage repair enzymes
-
-
-
0.00000000000000000000000000000006127
143.0
View
YYD3_k127_4045693_4
Acetyltransferase (GNAT) family
-
-
-
0.00000000000000000000000001167
126.0
View
YYD3_k127_4045693_5
TIGRFAM methionine biosynthesis protein MetW
-
-
-
0.000000000000000000000007223
116.0
View
YYD3_k127_4045693_6
thiol-disulfide isomerase and thioredoxins
-
-
-
0.00000000000000000239
98.0
View
YYD3_k127_4045693_7
Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
K01958
GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576
6.4.1.1
0.000003531
57.0
View
YYD3_k127_4057792_0
Belongs to the peptidase S8 family
-
-
-
0.00000000000000003695
91.0
View
YYD3_k127_4079617_0
Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000005926
287.0
View
YYD3_k127_4079617_1
PFAM Cobyrinic acid ac-diamide synthase
K07321
-
-
0.000000000000000000000000000000000000000000000001835
197.0
View
YYD3_k127_4079617_2
PFAM Respiratory-chain NADH dehydrogenase 24 Kd subunit
K00334
-
1.6.5.3
0.00000000000000000000000000000000000000000002993
175.0
View
YYD3_k127_4079617_3
2Fe-2S iron-sulfur cluster binding domain
-
-
-
0.00000000000000000000000006358
112.0
View
YYD3_k127_4079617_4
Cyclic nucleotide-monophosphate binding domain
K10914
-
-
0.00000001008
62.0
View
YYD3_k127_408068_0
GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
K03665
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813
300.0
View
YYD3_k127_408068_1
Butirosin biosynthesis protein H, N-terminal
-
-
-
0.00000000000000000000000000000000000009528
150.0
View
YYD3_k127_408068_2
Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
K03118
-
-
0.00000000000000000000000000006614
125.0
View
YYD3_k127_408068_3
CDP-alcohol phosphatidyltransferase
K08744
-
2.7.8.41
0.0000000000000000000000001784
122.0
View
YYD3_k127_408850_0
Elongation factor Tu domain 2
K02355
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382
564.0
View
YYD3_k127_408850_1
PFAM peptidase U32
K08303
-
-
0.00009331
47.0
View
YYD3_k127_4103142_0
Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
K00058
-
1.1.1.399,1.1.1.95
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009828
532.0
View
YYD3_k127_4103142_1
-
-
-
-
0.0000000000000000000000000000000000000000000000004884
184.0
View
YYD3_k127_4103142_3
Domain of unknown function (DUF4870)
K09940
-
-
0.0000000007258
65.0
View
YYD3_k127_4118821_0
Phosphoadenosine phosphosulfate reductase family
K21947
-
2.8.1.15
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005394
326.0
View
YYD3_k127_4118821_1
Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
K07442
GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016426,GO:0016429,GO:0016740,GO:0016741,GO:0030488,GO:0031515,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234
2.1.1.219,2.1.1.220
0.00000000000000000000000000000000000000000000000000000000000000000000000000006035
267.0
View
YYD3_k127_4118821_2
PFAM NAD-dependent epimerase dehydratase
K01784,K02473
-
5.1.3.2,5.1.3.7
0.000000000000000000000000000000000000000000000000000000002867
206.0
View
YYD3_k127_4118821_5
ThiS family
K03154
-
-
0.0001545
47.0
View
YYD3_k127_4120875_0
Chalcone and stilbene synthases, C-terminal domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241
443.0
View
YYD3_k127_4120875_1
Isoprenylcysteine carboxyl methyltransferase (ICMT) family
K16168
-
-
0.00000000000000000000000000000000006531
142.0
View
YYD3_k127_4120875_2
YceI-like domain
-
-
-
0.000000000000000000002809
104.0
View
YYD3_k127_4120875_3
MMPL family
K07003
-
-
0.00000000008134
69.0
View
YYD3_k127_4123629_0
Cytochrome c554 and c-prime
-
-
-
0.0000000000000000000000000000000000000000000000000000000000001269
218.0
View
YYD3_k127_4123629_1
cell redox homeostasis
-
-
-
0.000000000000000000000000000000000000000000000000000007731
194.0
View
YYD3_k127_4123629_2
cell redox homeostasis
-
-
-
0.00000004911
59.0
View
YYD3_k127_4167677_0
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
K00334,K00335
-
1.6.5.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031
527.0
View
YYD3_k127_4167677_1
formate dehydrogenase (NAD+) activity
K00336
-
1.6.5.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361
342.0
View
YYD3_k127_4167677_2
Thioredoxin-like [2Fe-2S] ferredoxin
K00334
-
1.6.5.3
0.00000000000000000000000000000000002451
136.0
View
YYD3_k127_4180317_0
Belongs to the DegT DnrJ EryC1 family
K13017
-
2.6.1.98
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004948
377.0
View
YYD3_k127_4180317_1
PFAM glycosyl transferase family 9
K02841
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000003316
266.0
View
YYD3_k127_4181681_0
transferase activity, transferring glycosyl groups
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573
355.0
View
YYD3_k127_4181681_1
Glycosyl transferase, family 2
K00786
GO:0003674,GO:0003824,GO:0016740,GO:0016757
-
0.0000000000000000000000000000000000000000000000000000004012
203.0
View
YYD3_k127_4181681_2
Glycosyl transferase family 2
-
-
-
0.00000000000000000000000000000000000000000000000001104
190.0
View
YYD3_k127_4181681_3
Glycosyltransferase family 9 (heptosyltransferase)
K02841,K02843
-
-
0.00000000000000000000000000000000000000005033
171.0
View
YYD3_k127_4201809_0
PFAM Haloacid dehalogenase domain protein hydrolase
K01091
-
3.1.3.18
0.0000000000000000000000000000000000000000000000000008117
193.0
View
YYD3_k127_4201809_1
PFAM Uncharacterised ACR, YagE family COG1723
-
-
-
0.000000000000000000000000000000000000000000000004565
192.0
View
YYD3_k127_4201809_2
Belongs to the phosphoglycerate kinase family
K00927
GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576
2.7.2.3
0.0000000000000000000000000000000000000000003745
160.0
View
YYD3_k127_4201809_3
CAAX protease self-immunity
K07052
-
-
0.00000000001206
74.0
View
YYD3_k127_4214571_0
biosynthesis protein ThiH
K03150
-
4.1.99.19
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004061
379.0
View
YYD3_k127_4214571_1
ABC-type transport auxiliary lipoprotein component
K18480
-
-
0.0000000000000002024
93.0
View
YYD3_k127_4236155_0
Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
K07456
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004998
386.0
View
YYD3_k127_4236155_1
LD-carboxypeptidase
K01297
-
3.4.17.13
0.0000000000000000000000000000000000000000000000000000001913
205.0
View
YYD3_k127_4236155_2
PFAM Beta-lactamase
-
-
-
0.00003554
57.0
View
YYD3_k127_4236518_0
response regulator
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005587
433.0
View
YYD3_k127_4236518_1
HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005693
339.0
View
YYD3_k127_4238956_0
Aminotransferase class IV
K03342
-
2.6.1.85,4.1.3.38
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246
452.0
View
YYD3_k127_4238956_1
Toxic component of a toxin-antitoxin (TA) module. An RNase
K07064
-
-
0.000000000000000002226
87.0
View
YYD3_k127_4243033_0
FecR protein
-
-
-
7.467e-275
869.0
View
YYD3_k127_4268779_0
DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
K01972
GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360
6.5.1.2
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134
584.0
View
YYD3_k127_4268779_1
PFAM Radical SAM domain protein
K04069
-
1.97.1.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532
370.0
View
YYD3_k127_4268779_2
COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
K07713
GO:0000156,GO:0000160,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0023052,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576
-
0.0000000000000000000000000000000000005106
149.0
View
YYD3_k127_4268779_3
PFAM acylphosphatase
K01512
GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818
3.6.1.7
0.0000000000000000000006792
97.0
View
YYD3_k127_4296919_0
PFAM inositol monophosphatase
K01092
-
3.1.3.25
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001941
286.0
View
YYD3_k127_4296919_1
Cobalt uptake substrate-specific transmembrane region
K02007
-
-
0.000000000000000000000000000000000000000000000000000000000000000000153
237.0
View
YYD3_k127_4296919_2
nickel-responsive regulator
K07722
GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141
-
0.0000000000000000000000000000000000000265
145.0
View
YYD3_k127_4296919_3
cobalt ion transport
K02009
-
-
0.000000002204
68.0
View
YYD3_k127_4296919_4
nickel-responsive regulator
K07722
GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141
-
0.0000197
50.0
View
YYD3_k127_430590_0
PFAM type II secretion system
K02653
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006022
478.0
View
YYD3_k127_430590_1
Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
K04094
-
2.1.1.74
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006
431.0
View
YYD3_k127_430590_2
PFAM ATP-binding region, ATPase domain protein
K02668,K07708,K07709
-
2.7.13.3
0.0000000000000000000000000000000000000000000000000000000000000000000000002676
277.0
View
YYD3_k127_430590_3
Phage integrase, N-terminal SAM-like domain
K03733,K04763
-
-
0.000000000000000000000000000000000000000000000000000000000000000000001059
248.0
View
YYD3_k127_430590_4
Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
K01419
-
3.4.25.2
0.00000000000000000000000000000000000000000000000000000000000000003067
242.0
View
YYD3_k127_430590_5
C-terminal, D2-small domain, of ClpB protein
K03667
-
-
0.000000000000000000000000000000000000000000000001106
187.0
View
YYD3_k127_4312571_0
ATPase, P-type (transporting), HAD superfamily, subfamily IC
K01537
-
3.6.3.8
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007538
413.0
View
YYD3_k127_4312571_1
energy transducer activity
K03832
-
-
0.00000009579
63.0
View
YYD3_k127_4312571_2
COG0457 FOG TPR repeat
-
-
-
0.0000009882
60.0
View
YYD3_k127_4312571_3
deoxyhypusine monooxygenase activity
-
-
-
0.00003602
55.0
View
YYD3_k127_4317241_0
Histidine kinase A domain protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004255
314.0
View
YYD3_k127_4317241_1
GTP cyclohydrolase I
K00950,K01495
GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006082,GO:0006139,GO:0006575,GO:0006725,GO:0006729,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008616,GO:0009058,GO:0009108,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0019752,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034404,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0040007,GO:0042455,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1901657,GO:1901659
2.7.6.3,3.5.4.16
0.0000000000000000000000000000000000000000000000000000000000000000000000001821
253.0
View
YYD3_k127_4317241_2
Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
K11991
-
3.5.4.33
0.0000000000000000000000000000000000000000000002072
176.0
View
YYD3_k127_4317241_3
Belongs to the sigma-70 factor family. ECF subfamily
K03088
-
-
0.0000000000000000000000000002805
124.0
View
YYD3_k127_4317241_4
Rubrerythrin
-
-
-
0.00000000007359
72.0
View
YYD3_k127_4317241_5
Protein of unknown function (DUF3106)
-
-
-
0.00004373
53.0
View
YYD3_k127_4317241_6
Domain of unknown function DUF302
-
-
-
0.0003166
44.0
View
YYD3_k127_4317241_7
Putative zinc-finger
-
-
-
0.0008813
49.0
View
YYD3_k127_4328863_0
PFAM binding-protein-dependent transport systems inner membrane component
K02033
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004453
443.0
View
YYD3_k127_4328863_1
N-terminal TM domain of oligopeptide transport permease C
K02034
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289
394.0
View
YYD3_k127_4328863_2
Extracellular solute-binding protein, family 5
K02035
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005039
369.0
View
YYD3_k127_4328863_3
Oligopeptide/dipeptide transporter, C-terminal region
K02031,K15583
-
-
0.00000000000000000000000001335
116.0
View
YYD3_k127_4328863_4
receptor
K02014
-
-
0.00000001549
64.0
View
YYD3_k127_434933_0
Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
K01679
-
4.2.1.2
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519
410.0
View
YYD3_k127_434933_1
LexA-binding, inner membrane-associated putative hydrolase
K07038
-
-
0.00000000000000000000000000000002696
139.0
View
YYD3_k127_4349511_0
An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
K12574
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649
600.0
View
YYD3_k127_4349511_1
PFAM cell divisionFtsK SpoIIIE
K03466
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609
558.0
View
YYD3_k127_4349511_2
PFAM ATPase family associated with various cellular activities (AAA)
K03924
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177
302.0
View
YYD3_k127_4349511_3
Belongs to the UPF0758 family
K03630
-
-
0.000000000000000000000000000000000001755
145.0
View
YYD3_k127_4349511_4
1-acyl-sn-glycerol-3-phosphate acyltransferase
K00655
-
2.3.1.51
0.000000000000000000000000000000000001838
147.0
View
YYD3_k127_4349511_5
Outer membrane lipoprotein carrier protein LolA
K03634
-
-
0.000000000000000005388
93.0
View
YYD3_k127_4349511_6
Protein of unknown function DUF58
-
-
-
0.00000000000005443
84.0
View
YYD3_k127_4349511_7
Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12
K14441
-
2.8.4.4
0.000000000002787
71.0
View
YYD3_k127_4357569_0
Histidine kinase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493
407.0
View
YYD3_k127_4358886_0
COG0493 NADPH-dependent glutamate synthase beta chain and
K00266
-
1.4.1.13,1.4.1.14
7.943e-202
646.0
View
YYD3_k127_4358886_1
PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128
389.0
View
YYD3_k127_4358886_2
Provides the (R)-glutamate required for cell wall biosynthesis
K01776
-
5.1.1.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000001417
276.0
View
YYD3_k127_4358886_3
PFAM oxidoreductase FAD NAD(P)-binding domain protein
K00528
-
1.18.1.2,1.19.1.1
0.0000000000000000000000000000000000000000000000000000004072
196.0
View
YYD3_k127_4358886_4
-
-
-
-
0.00000000000000000001924
104.0
View
YYD3_k127_4358886_5
ABC transporter
K02003
-
-
0.00000000000002471
83.0
View
YYD3_k127_436209_0
Dehydrogenase E1 component
K00161,K00166
-
1.2.4.1,1.2.4.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032
362.0
View
YYD3_k127_436209_1
Transketolase, pyrimidine binding domain
K00162,K00167
-
1.2.4.1,1.2.4.4
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099
317.0
View
YYD3_k127_436209_2
Calcineurin-like phosphoesterase
K03269
-
3.6.1.54
0.0000000000000000000000001799
113.0
View
YYD3_k127_4364182_0
Single cache domain 3
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002689
363.0
View
YYD3_k127_4364182_1
Glucose / Sorbosone dehydrogenase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000002002
239.0
View
YYD3_k127_4364182_2
Membrane
-
-
-
0.000000000000000000000000000000000006156
143.0
View
YYD3_k127_4364182_3
catechol 2,3-dioxygenase activity
-
-
-
0.0000000000000000000000000001449
122.0
View
YYD3_k127_4364182_4
Involved in the biosynthesis of porphyrin-containing compound
-
-
-
0.0000000000000000000002663
101.0
View
YYD3_k127_4364182_5
-
-
-
-
0.00000000006427
76.0
View
YYD3_k127_4383197_0
Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
K00800
-
2.5.1.19
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008344
425.0
View
YYD3_k127_4383197_1
thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence
K02945
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001429
296.0
View
YYD3_k127_4383197_2
Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
K02945,K03527
-
1.17.7.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002447
294.0
View
YYD3_k127_4383197_3
cytidylate kinase activity
K00945
GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605
2.7.4.25
0.00000000000000000000000000000000000000000000000000003539
211.0
View
YYD3_k127_4383197_4
Prephenate dehydrogenase
K04517
-
1.3.1.12
0.00000000000000000000000000000000000023
145.0
View
YYD3_k127_4401551_0
DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
K02343
-
2.7.7.7
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841
335.0
View
YYD3_k127_4401551_1
oxidoreductase gamma subunit
K00172
-
1.2.7.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915
304.0
View
YYD3_k127_4401551_2
RecR protein
K06187
-
-
0.00000000000000000000000000000000000000000000000000000000000000001126
229.0
View
YYD3_k127_4401551_3
Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
K09747
-
-
0.00000000000000000000000000000002985
132.0
View
YYD3_k127_4409751_0
PFAM ABC transporter
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278
397.0
View
YYD3_k127_4409751_1
PFAM AMP-dependent synthetase and ligase
K01912
-
6.2.1.30
0.000000000000000000000000000000000000000000000000000001503
194.0
View
YYD3_k127_4409751_2
PFAM AMP-dependent synthetase and ligase
K01912
-
6.2.1.30
0.0000000000000000000000000000000000000000000001195
173.0
View
YYD3_k127_4424898_0
ABC-type multidrug transport system ATPase and permease
K06147
-
-
1.772e-230
728.0
View
YYD3_k127_4424898_1
Glycosyl transferase 4-like domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749
329.0
View
YYD3_k127_4424898_2
Phosphotransferase enzyme family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000001165
286.0
View
YYD3_k127_4424898_3
PFAM Phosphotransferase enzyme family
-
-
-
0.000001755
61.0
View
YYD3_k127_4425674_0
Domain of unknown function (DUF2088)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237
359.0
View
YYD3_k127_4425674_1
pfam abc
K02006
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000003257
272.0
View
YYD3_k127_4430381_0
ATPase family associated with various cellular activities (AAA)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178
370.0
View
YYD3_k127_4430381_1
Peptidase family U32
-
-
-
0.00000000000000000000000000000000000000000000000149
186.0
View
YYD3_k127_4430381_2
-
-
-
-
0.0000000000000000000000000000000000002979
151.0
View
YYD3_k127_4430381_3
peptidase U32
-
-
-
0.0000000001182
73.0
View
YYD3_k127_4430381_4
alginic acid biosynthetic process
-
-
-
0.000007772
53.0
View
YYD3_k127_4430381_5
COG1174 ABC-type proline glycine betaine transport systems, permease component
K05845,K05846
-
-
0.00006758
55.0
View
YYD3_k127_4444750_0
Uncharacterized protein conserved in bacteria (DUF2135)
-
-
-
0.00000003007
66.0
View
YYD3_k127_4458296_0
Isochorismatase family
-
-
-
0.00000000000000000000000000000000000000000000000002358
185.0
View
YYD3_k127_4458296_1
peptidase M24
-
-
-
0.0000000000000000000000000000000000000002571
153.0
View
YYD3_k127_4458296_2
cAMP biosynthetic process
-
-
-
0.0000000000002437
83.0
View
YYD3_k127_446931_0
Glucodextranase, domain N
K01178
-
3.2.1.3
9.767e-289
905.0
View
YYD3_k127_446931_1
Pyridoxal-phosphate dependent enzyme
K01754
-
4.3.1.19
0.00000000000000000000000000000000000000000000001412
182.0
View
YYD3_k127_4505493_0
cyclopropane-fatty-acyl-phospholipid synthase
K00574,K07154,K14369,K15257,K18534
GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0016999,GO:0017000,GO:0017144,GO:0032259,GO:0044237,GO:0044249
2.1.1.254,2.1.1.295,2.1.1.79,2.7.11.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938
422.0
View
YYD3_k127_4505493_1
Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates
K00772
GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004731,GO:0006082,GO:0006139,GO:0006144,GO:0006168,GO:0006520,GO:0006555,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009112,GO:0009113,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0017061,GO:0017144,GO:0018130,GO:0019438,GO:0019509,GO:0019752,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0055086,GO:0071265,GO:0071267,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
2.4.2.28
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042
369.0
View
YYD3_k127_4505493_2
Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity
K06941
GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360
2.1.1.192
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137
356.0
View
YYD3_k127_4505493_3
MaoC like domain
-
-
-
0.0000000000000000000000000000005176
123.0
View
YYD3_k127_4505493_4
TIGRFAM type IV pilus biogenesis stability protein PilW
K02656
-
-
0.00000000000000003579
95.0
View
YYD3_k127_4505493_5
Aminoacyl-tRNA editing domain
-
-
-
0.000000009078
57.0
View
YYD3_k127_4505927_0
Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
K01928
GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
6.3.2.13
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005438
407.0
View
YYD3_k127_4505927_1
Mur ligase family, catalytic domain
K01929
-
6.3.2.10
0.000000000000000000000000000000000000000000000000000000000008504
221.0
View
YYD3_k127_4505927_2
Penicillin-binding protein, dimerisation domain
K03587
-
3.4.16.4
0.000000000000000000000000000000000005488
143.0
View
YYD3_k127_452438_0
helix_turn_helix, Lux Regulon
K03556
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007905
422.0
View
YYD3_k127_452438_1
metal-dependent phosphohydrolase HD region
-
-
-
0.000000000000000000000000000000000000000000000000000000001121
218.0
View
YYD3_k127_4550360_0
Belongs to the pseudouridine synthase RsuA family
K06178,K06181,K06182
-
5.4.99.20,5.4.99.21,5.4.99.22
0.0000000000000000000000000000000000000000000000000000000006553
222.0
View
YYD3_k127_4550360_1
Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
K06024
-
-
0.000000000000000000000000000000000000000000005085
177.0
View
YYD3_k127_4550360_2
Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
K05896
-
-
0.0000002747
55.0
View
YYD3_k127_4559779_0
Doubled CXXCH motif (Paired_CXXCH_1)
-
-
-
0.0000000000000000000000000001277
132.0
View
YYD3_k127_4559779_2
zinc ion binding
K12035
-
2.3.2.27
0.000000000000000007002
89.0
View
YYD3_k127_4560587_0
Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
K04066
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559
507.0
View
YYD3_k127_4560587_1
aldehyde-lyase activity
K01621
-
4.1.2.22,4.1.2.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006082
409.0
View
YYD3_k127_4560587_2
Oxidoreductase
-
-
-
0.00000000000000000000000000000184
132.0
View
YYD3_k127_4570890_0
Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
K01711
-
4.2.1.47
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008086
379.0
View
YYD3_k127_4570890_1
Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000002306
274.0
View
YYD3_k127_4570890_2
PFAM Glycosyl transferase family 2
-
-
-
0.0000000000000000000000000000000000000007591
168.0
View
YYD3_k127_4576990_0
Transketolase, pyrimidine binding domain
K00162,K00167,K21417
GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944,GO:0140030,GO:0140032
1.2.4.1,1.2.4.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516
374.0
View
YYD3_k127_4576990_1
e3 binding domain
K00658
-
2.3.1.61
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468
338.0
View
YYD3_k127_4576990_2
pyridine nucleotide-disulphide oxidoreductase dimerisation region
K00382
-
1.8.1.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008088
310.0
View
YYD3_k127_4576990_3
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
K00161,K11381,K21416
-
1.2.4.1,1.2.4.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802
308.0
View
YYD3_k127_4576990_4
Biotin/lipoate A/B protein ligase family
K03801
-
2.3.1.181
0.00000000000000004007
83.0
View
YYD3_k127_458375_0
Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
K03639
GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
4.1.99.22
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005259
312.0
View
YYD3_k127_458375_1
SMART Elongator protein 3 MiaB NifB
K07139
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006682
288.0
View
YYD3_k127_458375_2
Thioesterase superfamily
-
-
-
0.0000000000000000000000001525
110.0
View
YYD3_k127_458375_3
Tetratricopeptide repeat
-
-
-
0.000000000000000000001257
108.0
View
YYD3_k127_458375_4
Papain-like cysteine protease AvrRpt2
-
-
-
0.000000000000000000003068
99.0
View
YYD3_k127_4603147_0
4Fe-4S dicluster domain
K00184
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874
391.0
View
YYD3_k127_4603147_1
Cytochrome c7 and related cytochrome c
-
-
-
0.0000000000000000000000000000000000000000000000000000000000001288
216.0
View
YYD3_k127_4603147_2
Cytochrome c
-
-
-
0.000000000000000000000000000000000000001171
164.0
View
YYD3_k127_4617694_0
Cytochrome bd-type quinol oxidase subunit 1
K00425
-
1.10.3.14
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537
503.0
View
YYD3_k127_4617694_1
Cytochrome bd-type quinol oxidase, subunit 2
K00426
-
1.10.3.14
0.000000000000000000000000000000000000000000000000000000000000000000000002796
253.0
View
YYD3_k127_4653815_0
Vacuole effluxer Atg22 like
K06902
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591
580.0
View
YYD3_k127_4653815_1
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
K01999
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006
520.0
View
YYD3_k127_4653815_2
NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
K12410
-
-
0.000000000000000000000000000000000000000000000000000001821
196.0
View
YYD3_k127_4653815_3
DUF218 domain
-
-
-
0.0000000000000000000000000000000000000000000003784
177.0
View
YYD3_k127_4653815_4
Belongs to the binding-protein-dependent transport system permease family
K01997
-
-
0.00000000000000000000000000000000000002299
145.0
View
YYD3_k127_4665647_0
Glycosyl transferase family 2
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111
330.0
View
YYD3_k127_4665647_1
Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
K00989
GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:1901361,GO:1901575
2.7.7.56
0.000000000000000000000000000000000000000000000000000000000000000000000000000001452
289.0
View
YYD3_k127_4665647_2
Belongs to the MsrB Met sulfoxide reductase family
K07305
-
1.8.4.12
0.00000000000000000000000000000000000000000000000000000000000000005325
226.0
View
YYD3_k127_4665647_3
Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
K02428
-
3.6.1.66
0.00000000000000000000000000000000000000009001
168.0
View
YYD3_k127_4665647_4
COG1233 Phytoene dehydrogenase and related
-
-
-
0.00000000000000000001535
94.0
View
YYD3_k127_4700298_0
Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011
351.0
View
YYD3_k127_4700298_1
DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
K10773
-
4.2.99.18
0.00000000000000000000000000000000000000000000000000000000000004742
226.0
View
YYD3_k127_4700298_2
PFAM AMMECR1 domain protein
K09141
-
-
0.0000000000000000000000000000000000000000000000001791
183.0
View
YYD3_k127_4700298_3
Malic enzyme, NAD binding domain
K00027
-
1.1.1.38
0.000000000000000000000008768
104.0
View
YYD3_k127_4700298_4
Helix-turn-helix domain
-
-
-
0.0000000000000000000006066
102.0
View
YYD3_k127_4736086_0
methyltransferase activity
-
-
-
0.0000000000000000000000002018
114.0
View
YYD3_k127_4736086_1
membrane protein (homolog of Drosophila rhomboid)
-
-
-
0.0000000000000007486
90.0
View
YYD3_k127_4736086_2
Transcription factor zinc-finger
-
-
-
0.0005129
52.0
View
YYD3_k127_4740652_0
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
K00344,K00966,K01840,K03431,K15778,K16881
-
1.6.5.5,2.7.7.13,5.4.2.10,5.4.2.2,5.4.2.8
1.864e-275
882.0
View
YYD3_k127_4740652_1
Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
K13038
-
4.1.1.36,6.3.2.5
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005813
377.0
View
YYD3_k127_4740652_2
beta-lactamase domain protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000005518
234.0
View
YYD3_k127_4740652_3
Uracil-DNA glycosylase
K21929
-
3.2.2.27
0.00000000000000000000000000000000000000000000000000000001951
221.0
View
YYD3_k127_4740652_4
SMART PUA domain containing protein
K06969
-
2.1.1.191
0.00000000000000000000000000000000000000000000000000004246
201.0
View
YYD3_k127_4740652_5
LysE type translocator
-
-
-
0.000000000000000000000000000000000000000000000000005144
189.0
View
YYD3_k127_4740652_6
Belongs to the Nudix hydrolase family
K03574
-
3.6.1.55
0.00000000000000000000000000000000000000000000000008488
182.0
View
YYD3_k127_475951_0
Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
K08357
-
-
0.0
1371.0
View
YYD3_k127_475951_1
4Fe-4S dicluster domain
K00184
-
-
0.000000000000000000000000000000000000000002472
159.0
View
YYD3_k127_475951_2
Belongs to the UbiD family
K03182,K16239
-
4.1.1.61,4.1.1.98
0.000002219
50.0
View
YYD3_k127_4764512_0
Ferritin-like domain
-
GO:0003674,GO:0005488,GO:0005506,GO:0006950,GO:0006979,GO:0008150,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0050896
-
0.00000000000000000000000000000000000000000000000000002948
191.0
View
YYD3_k127_4764512_1
Belongs to the sigma-70 factor family. ECF subfamily
K03088
-
-
0.0000000000000000000000000000000000001356
151.0
View
YYD3_k127_4764512_2
Evidence 4 Homologs of previously reported genes of
-
-
-
0.0000000000001
74.0
View
YYD3_k127_4766305_0
Acyl-CoA dehydrogenase, N-terminal domain
K00249
-
1.3.8.7
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571
473.0
View
YYD3_k127_4766305_1
Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
K01714
-
4.3.3.7
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237
398.0
View
YYD3_k127_4766305_10
Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
K00215,K03546
GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0042802,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
1.17.1.8
0.0000000000000000000005236
95.0
View
YYD3_k127_4766305_2
regulatory protein IclR
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222
313.0
View
YYD3_k127_4766305_3
Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
K01778
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
5.1.1.7
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002492
293.0
View
YYD3_k127_4766305_4
fumarylacetoacetate (FAA) hydrolase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000006194
280.0
View
YYD3_k127_4766305_5
Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
K01586
-
4.1.1.20
0.00000000000000000000000000000000000000000000000000000000000000000000000000004703
261.0
View
YYD3_k127_4766305_6
Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
K00215
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576
1.17.1.8
0.0000000000000000000000000000000000000000000000000000000002346
211.0
View
YYD3_k127_4766305_7
PFAM regulatory protein TetR
K13770
-
-
0.000000000000000000000000000000000000000000000000000001176
198.0
View
YYD3_k127_4766305_8
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
K00950
-
2.7.6.3
0.000000000000000000000000004891
118.0
View
YYD3_k127_4766305_9
Tetratricopeptide repeat
-
-
-
0.00000000000000000000000001371
116.0
View
YYD3_k127_4789646_0
In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
K00951
-
2.7.6.5
4.211e-256
811.0
View
YYD3_k127_4789646_1
Essential for recycling GMP and indirectly, cGMP
K00942
-
2.7.4.8
0.00000000000000000000000000000000000000000000000001637
186.0
View
YYD3_k127_4789646_2
Domain of unknown function (DUF1732)
-
-
-
0.00000000000000000000000000000000000000000000321
182.0
View
YYD3_k127_4789646_3
endoribonuclease L-PSP
K09022
-
3.5.99.10
0.000000000000000000000000000000000000000001903
159.0
View
YYD3_k127_4789646_4
Domain of unknown function (DUF4416)
-
-
-
0.00000000000000000000000000000000000000001716
164.0
View
YYD3_k127_4789646_5
Phosphomethylpyrimidine kinase
K03272
-
2.7.1.167,2.7.7.70
0.0000000000000000000000001009
109.0
View
YYD3_k127_4789646_6
Belongs to the bacterial ribosomal protein bL28 family
K02902
GO:0003674,GO:0003735,GO:0005198
-
0.0000000000000000000001775
97.0
View
YYD3_k127_4789646_7
Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
K03060
-
2.7.7.6
0.000000000004383
74.0
View
YYD3_k127_4825355_0
AAA domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003263
280.0
View
YYD3_k127_4825355_1
Alcohol dehydrogenase GroES-like domain
K13953
-
1.1.1.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000001671
268.0
View
YYD3_k127_4825355_2
-
-
-
-
0.0000000000001698
76.0
View
YYD3_k127_4825355_3
OsmC-like protein
-
-
-
0.000000003612
61.0
View
YYD3_k127_4891708_0
lipolytic protein G-D-S-L family
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000002411
281.0
View
YYD3_k127_4891708_1
Dolichyl-phosphate-mannose-protein mannosyltransferase
-
-
-
0.00001673
56.0
View
YYD3_k127_4910648_0
Rod shape-determining protein
K03569
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244
506.0
View
YYD3_k127_4910648_1
PFAM PpiC-type peptidyl-prolyl cis-trans isomerase
K03770
-
5.2.1.8
0.00000000000000000000000000000000000000001003
174.0
View
YYD3_k127_4910648_2
UBA THIF-type NAD FAD binding protein
K21029
-
2.7.7.80
0.00000000000000000000000000000001499
129.0
View
YYD3_k127_4910648_3
Involved in formation and maintenance of cell shape
K03570
-
-
0.0000000000000000000000000000000172
138.0
View
YYD3_k127_4910648_4
Catalyzes cross-linking of the peptidoglycan cell wall
K05515
-
3.4.16.4
0.0000000000000000000000000003082
128.0
View
YYD3_k127_4945669_0
PFAM AMP-dependent synthetase and ligase
K01897
-
6.2.1.3
3.503e-248
784.0
View
YYD3_k127_4945669_1
Histidine kinase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614
482.0
View
YYD3_k127_4945669_2
Kdo2-lipid A biosynthetic process
K02517,K20543,K22311
-
2.3.1.241,2.3.1.265
0.00000000000000000000000000000000000000000000000000000000000000001594
237.0
View
YYD3_k127_4945669_3
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
-
-
-
0.000000000000000000000000000000000000000000008192
164.0
View
YYD3_k127_4945669_4
Radical SAM
K06937
-
-
0.000000000004459
72.0
View
YYD3_k127_4976110_0
Dimerisation domain of Zinc Transporter
K13283
-
-
0.0000000000000000000000000000000000000000000000000009159
191.0
View
YYD3_k127_4976110_1
DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
K10773
-
4.2.99.18
0.000000000000000000000000000000000000000000008528
171.0
View
YYD3_k127_4976110_2
Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
K00655
-
2.3.1.51
0.00000000000000751
86.0
View
YYD3_k127_4976110_3
Pfam:DUF1049
-
-
-
0.000122
50.0
View
YYD3_k127_4984005_0
ACT domain
K03567
-
-
0.000000000000000000000000000000000000000000000005998
178.0
View
YYD3_k127_4984005_1
cyclic nucleotide-binding
K01420,K21563
-
-
0.000000000000000000000000000000000000000000002698
172.0
View
YYD3_k127_4984005_2
COG0457 FOG TPR repeat
-
-
-
0.000000000000000000000000000000000001724
153.0
View
YYD3_k127_4984005_3
Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
K01462
-
3.5.1.88
0.0000000000000000000000000000000005072
133.0
View
YYD3_k127_4999434_0
Protein of unknown function (DUF1343)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004646
503.0
View
YYD3_k127_4999434_1
Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
K01486
-
3.5.4.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397
356.0
View
YYD3_k127_4999434_2
Cytochrome c
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000206
267.0
View
YYD3_k127_4999434_3
Belongs to the purine pyrimidine phosphoribosyltransferase family
K00760
-
2.4.2.8
0.00000000000000000000000000000000000000000000000000164
190.0
View
YYD3_k127_5020807_0
Belongs to the UbiD family
K03182,K16239
-
4.1.1.61,4.1.1.98
4.674e-222
697.0
View
YYD3_k127_5020807_1
UbiA prenyltransferase family
K03179
-
2.5.1.39
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000384
330.0
View
YYD3_k127_5020807_2
Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
K03186
-
2.5.1.129
0.000000566
54.0
View
YYD3_k127_5038471_0
PFAM DAHP synthetase I KDSA
K03856,K04516
-
2.5.1.54,5.4.99.5
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009712
475.0
View
YYD3_k127_5038471_1
Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits)
K05365
-
2.4.1.129,3.4.16.4
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006135
323.0
View
YYD3_k127_5038471_2
Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage
K00772
-
2.4.2.28
0.00000000000000000000000000000000000000000000001341
186.0
View
YYD3_k127_5050158_0
Aminotransferase class-III
K01845
-
5.4.3.8
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007644
509.0
View
YYD3_k127_5050158_1
it plays a direct role in the translocation of protons across the membrane
K02108
GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600
-
0.000000000000000000000000000000000000000000000000000002384
206.0
View
YYD3_k127_5050158_2
F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
K02110
GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600
-
0.0000000000000000000265
95.0
View
YYD3_k127_5050158_3
Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter
-
-
-
0.00000000000003408
76.0
View
YYD3_k127_5050158_4
Spore Coat Protein U domain
-
-
-
0.00004872
46.0
View
YYD3_k127_5058884_0
Elongation factor SelB, winged helix
K03833
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194
387.0
View
YYD3_k127_5058884_1
Domain of unknown function (DUF4118)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000003345
276.0
View
YYD3_k127_5058884_2
Smr domain
-
-
-
0.0000000000000000000000006305
119.0
View
YYD3_k127_5058884_3
helix_turn_helix, Arsenical Resistance Operon Repressor
K03892
-
-
0.000000000000000001638
92.0
View
YYD3_k127_5058884_4
Low molecular weight phosphotyrosine protein phosphatase
K03741
-
1.20.4.1
0.000000000000000003822
86.0
View
YYD3_k127_5072723_0
Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane
K03980
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009719
358.0
View
YYD3_k127_5072723_1
Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
K03593
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000273
295.0
View
YYD3_k127_5072723_2
Metallo-beta-lactamase superfamily
-
-
-
0.000000000000000000000000000000000006738
153.0
View
YYD3_k127_5077050_0
Belongs to the deoxyhypusine synthase family
K00809
-
2.5.1.46
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883
520.0
View
YYD3_k127_5084080_0
Histidine kinase A domain protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006092
541.0
View
YYD3_k127_5084080_1
PFAM ABC transporter
K01995
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008737
357.0
View
YYD3_k127_5084080_2
PFAM AMP-dependent synthetase and ligase
K01897
-
6.2.1.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638
335.0
View
YYD3_k127_5084080_3
Sigma-54 interaction domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000004292
221.0
View
YYD3_k127_5084080_4
Bacterial regulatory protein, Fis family
-
-
-
0.00000000000000000000000000000000000000000008161
166.0
View
YYD3_k127_5097127_0
Peptidase family M1 domain
-
-
-
6.982e-209
674.0
View
YYD3_k127_5097127_1
Histidine kinase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000005293
268.0
View
YYD3_k127_5104974_0
TIGRFAM iron-sulfur cluster binding protein
K18929
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007444
468.0
View
YYD3_k127_5104974_1
Cysteine-rich domain
K18928
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000007357
263.0
View
YYD3_k127_5104974_2
LUD domain
K00782
-
-
0.000000000001527
81.0
View
YYD3_k127_5128955_0
SMART Elongator protein 3 MiaB NifB
K22227
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041
554.0
View
YYD3_k127_5128955_1
Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
K01599
GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
4.1.1.37
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701
418.0
View
YYD3_k127_5128955_2
Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
K00231
-
1.3.3.15,1.3.3.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004994
348.0
View
YYD3_k127_5128955_3
Catalyzes the ferrous insertion into protoporphyrin IX
K01772
GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
4.99.1.1,4.99.1.9
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004374
296.0
View
YYD3_k127_5151992_0
ATPase BadF BadG BcrA BcrD type
-
-
-
2.516e-213
680.0
View
YYD3_k127_5179525_0
Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
K03296
-
-
3.71e-227
725.0
View
YYD3_k127_5179525_1
reductase
K00059
-
1.1.1.100
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009463
331.0
View
YYD3_k127_5179525_2
Bacterial transferase hexapeptide (six repeats)
-
-
-
0.00000000000000000000000000000000000000000000000001713
184.0
View
YYD3_k127_5179525_3
Thioesterase superfamily
K02614
-
-
0.0000000007955
69.0
View
YYD3_k127_5179525_4
phosphoserine phosphatase activity
K07711
-
2.7.13.3
0.00000462
48.0
View
YYD3_k127_5191020_0
Zinc-uptake complex component A periplasmic
K09815
-
-
0.00000000000000000000000000000000000007407
156.0
View
YYD3_k127_5191020_1
Tellurite resistance protein TehB
-
-
-
0.0000000000000000000000007885
113.0
View
YYD3_k127_5191020_2
Belongs to the Fur family
K03711
-
-
0.0000000000000001795
86.0
View
YYD3_k127_526724_0
Elongation factor Tu GTP binding domain
K00956
-
2.7.7.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942
614.0
View
YYD3_k127_526724_1
Nitrite and sulphite reductase 4Fe-4S
K00366,K00381,K00392
-
1.7.7.1,1.8.1.2,1.8.7.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221
428.0
View
YYD3_k127_526724_2
TIGRFAM sulfate adenylyltransferase, small subunit
K00957
-
2.7.7.4
0.000000000000000000002878
94.0
View
YYD3_k127_5306639_0
Radical SAM
K01843
-
5.4.3.2
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534
453.0
View
YYD3_k127_5306639_1
Belongs to the D-alanine--D-alanine ligase family
K01921
-
6.3.2.4
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008077
321.0
View
YYD3_k127_5306639_2
ATP-dependent DNA helicase activity
K01144,K07464,K16898
-
3.1.11.5,3.1.12.1,3.6.4.12
0.000000000000000000000000000000000000000000000000000003432
214.0
View
YYD3_k127_5306639_3
DNA-binding helix-turn-helix protein
-
-
-
0.000000000000000000000000000000000009127
142.0
View
YYD3_k127_5306639_4
acetyltransferase
K18815
-
2.3.1.82
0.000000000000000000000000000000002958
141.0
View
YYD3_k127_5306639_5
Transcription factor zinc-finger
K09981
-
-
0.0000000000000000000000000001203
118.0
View
YYD3_k127_5306639_6
Belongs to the D-alanine--D-alanine ligase family
K01921,K01955
-
6.3.2.4,6.3.5.5
0.000000000000000000000000004665
124.0
View
YYD3_k127_5306639_7
Methyltransferase domain
K01921
-
6.3.2.4
0.00000001664
68.0
View
YYD3_k127_53316_0
Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
K01000
-
2.7.8.13
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063
503.0
View
YYD3_k127_53316_1
Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
K01925
GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008764,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
6.3.2.9
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004013
359.0
View
YYD3_k127_53316_2
Peptidoglycan polymerase that is essential for cell division
K03588
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847
343.0
View
YYD3_k127_53316_3
Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
K02563
-
2.4.1.227
0.0000000000000000000000000000000000000002022
154.0
View
YYD3_k127_53316_4
Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
K01929
-
6.3.2.10
0.000000000000000000000000003996
114.0
View
YYD3_k127_5337240_0
The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
K03551
-
3.6.4.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152
420.0
View
YYD3_k127_5337240_1
Transcriptional regulator
-
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464
-
0.00000000000000000000000000000000000000000002187
165.0
View
YYD3_k127_5337240_2
The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
K03550
-
3.6.4.12
0.000000000000000000000000000000000000001258
156.0
View
YYD3_k127_5337240_3
Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
K01159
-
3.1.22.4
0.00000000000000000000000000000000000002052
149.0
View
YYD3_k127_5337240_4
KWG Leptospira
-
-
-
0.00000000000000000000000000001205
127.0
View
YYD3_k127_5354630_0
MoeA domain protein domain I and II
K03750
-
2.10.1.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006661
497.0
View
YYD3_k127_5354630_1
ABC transporter
K06857
-
3.6.3.55
0.000000000000000000000000000000000000000001567
160.0
View
YYD3_k127_5354630_2
Belongs to the peptidase S8 family
-
-
-
0.0000000000000000000006487
97.0
View
YYD3_k127_5403233_0
Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components
K03106
-
3.6.5.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181
565.0
View
YYD3_k127_5403233_1
Belongs to the bacterial ribosomal protein bS16 family
K02959
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000007661
115.0
View
YYD3_k127_5403233_2
ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
K01338
-
3.4.21.53
0.00000000000000000001138
97.0
View
YYD3_k127_5403233_3
An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
K02860
-
-
0.0000000001639
72.0
View
YYD3_k127_5404613_0
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
K03429
-
2.4.1.315
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008923
386.0
View
YYD3_k127_5404613_1
Dual specificity phosphatase, catalytic domain
-
-
-
0.000000000000000000000000000000000000000000000000000000007094
216.0
View
YYD3_k127_5404613_2
Phospholipase, patatin family
K07001
-
-
0.000000000000000000000000000000000000000000001138
184.0
View
YYD3_k127_5404613_3
PFAM Phosphomethylpyrimidine kinase type-1
K00941
GO:0008150,GO:0040007
2.7.1.49,2.7.4.7
0.0000000002612
64.0
View
YYD3_k127_5407607_0
Belongs to the enoyl-CoA hydratase isomerase family
K07511
-
4.2.1.17
0.00000000000001081
87.0
View
YYD3_k127_5407607_1
AI-2E family transporter
-
-
-
0.00000000000001289
79.0
View
YYD3_k127_5409979_0
surface antigen
-
-
-
0.00000000000000000000000000000000000000009384
172.0
View
YYD3_k127_5409979_1
TamB, inner membrane protein subunit of TAM complex
K09800
-
-
0.00000000000000000000001922
115.0
View
YYD3_k127_5410527_0
Transketolase, thiamine diphosphate binding domain
K00615
-
2.2.1.1
1.714e-243
773.0
View
YYD3_k127_5410527_1
Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
K01681
GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0045333,GO:0046459,GO:0047456,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:1901363
4.2.1.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007434
538.0
View
YYD3_k127_5410527_2
Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
K01810,K13810
-
2.2.1.2,5.3.1.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008662
392.0
View
YYD3_k127_5410527_3
6-phosphogluconate dehydrogenase, C-terminal domain
K00033
-
1.1.1.343,1.1.1.44
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631
368.0
View
YYD3_k127_5410527_4
PFAM Integral membrane protein TerC
K05794
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721
350.0
View
YYD3_k127_5410527_5
PFAM OmpA MotB domain protein
K03286
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000008864
249.0
View
YYD3_k127_5410527_6
Probably functions as a manganese efflux pump
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000006689
239.0
View
YYD3_k127_5410527_7
Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
K00036
-
1.1.1.363,1.1.1.49
0.00000000000000000000000000000000000000000000000000000002635
203.0
View
YYD3_k127_5416377_0
PASTA domain
K03587
-
3.4.16.4
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839
405.0
View
YYD3_k127_5416377_1
Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
K03438
-
2.1.1.199
0.000000000000005631
78.0
View
YYD3_k127_5416377_2
Essential cell division protein
-
-
-
0.00005511
53.0
View
YYD3_k127_5428024_0
Pfam:DUF162
K18929
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952
560.0
View
YYD3_k127_5428024_1
Cysteine-rich domain
K18928
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974
358.0
View
YYD3_k127_5428024_2
ATPases associated with a variety of cellular activities
K01996
-
-
0.00000000000000000000000000000000000000000000000000000000000544
222.0
View
YYD3_k127_5428024_3
PFAM LmbE family protein
-
-
-
0.00000000000000000000000000000000000000000000004643
174.0
View
YYD3_k127_5428024_4
LUD domain
K00782
-
-
0.0000000000000000000000000000000000002032
161.0
View
YYD3_k127_5428024_5
COG0411 ABC-type branched-chain amino acid transport systems ATPase component
K01995
-
-
0.000000000000000000000000000000000001526
143.0
View
YYD3_k127_5436008_0
PFAM Cobyrinic acid a,c-diamide synthase
K03496
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005586
313.0
View
YYD3_k127_5436008_1
PFAM ParB domain protein nuclease
K03497
-
-
0.000000000000000000000000000000000000000000000000000000000000004584
241.0
View
YYD3_k127_5436008_2
Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
K02109
-
-
0.0006664
49.0
View
YYD3_k127_5440406_0
Phosphohydrolase-associated domain
K01129
GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576
3.1.5.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299
418.0
View
YYD3_k127_5440406_1
Cytochrome c554 and c-prime
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000041
270.0
View
YYD3_k127_5440406_2
diguanylate cyclase
-
-
-
0.0000000000000000000000000000000000000001653
168.0
View
YYD3_k127_5440406_3
ubiE/COQ5 methyltransferase family
-
-
-
0.0000000000000000000000000000004661
130.0
View
YYD3_k127_5440406_4
Histidine kinase
-
-
-
0.0000000000000000000023
102.0
View
YYD3_k127_5470689_0
PFAM CO dehydrogenase acetyl-CoA synthase complex beta subunit
K14138
-
2.3.1.169
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544
481.0
View
YYD3_k127_5470689_1
CO dehydrogenase/acetyl-CoA synthase delta subunit
K00197
-
2.1.1.245
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005405
381.0
View
YYD3_k127_5470689_2
PFAM ferredoxin
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000001718
249.0
View
YYD3_k127_5470689_3
CO dehydrogenase acetyl-CoA synthase delta subunit
K00194
-
2.1.1.245
0.0000000000000000000000000000000000000000000000000000000000628
228.0
View
YYD3_k127_5479728_0
ATP-binding region, ATPase domain protein domain protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005589
361.0
View
YYD3_k127_5479728_1
Ribose/Galactose Isomerase
K01808
-
5.3.1.6
0.0000000000000000000000009243
106.0
View
YYD3_k127_5492749_0
response regulator
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002335
559.0
View
YYD3_k127_5492749_1
ATP-binding region ATPase domain protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248
380.0
View
YYD3_k127_5492749_2
Bacterial type II and III secretion system protein
K02453
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152
360.0
View
YYD3_k127_5492749_3
Cytochrome c biogenesis protein transmembrane region
K04084
-
1.8.1.8
0.0000000000000000000000000000000000000000000000000000000000000000000000005839
254.0
View
YYD3_k127_5492749_4
peroxiredoxin activity
-
-
-
0.0000000000000000000000207
106.0
View
YYD3_k127_5492749_5
cellulase activity
-
-
-
0.000000000000000004443
96.0
View
YYD3_k127_5574374_0
FAD-dependent dehydrogenases
-
-
-
3.842e-206
649.0
View
YYD3_k127_5574374_1
PFAM Alcohol dehydrogenase
K13953
-
1.1.1.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008042
426.0
View
YYD3_k127_5574374_2
Domain in cystathionine beta-synthase and other proteins.
K04767
-
-
0.000000000000000000000006484
107.0
View
YYD3_k127_5574374_3
DNA ligase
K01971
-
6.5.1.1
0.000000000000000000001809
97.0
View
YYD3_k127_5612891_0
GTP1/OBG
K03979
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009421
365.0
View
YYD3_k127_5612891_1
Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
K00931
GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
2.7.2.11
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618
336.0
View
YYD3_k127_5612891_2
Adenylyl- / guanylyl cyclase, catalytic domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000001408
287.0
View
YYD3_k127_5612891_3
N,N-dimethylaniline monooxygenase activity
K07222
-
-
0.00000000000000000000000000000000000000000000000000000006756
209.0
View
YYD3_k127_5612891_4
Aldehyde dehydrogenase family
K00147
GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114
1.2.1.41
0.0000000000000000000000000000000000000000000000002597
195.0
View
YYD3_k127_5612891_5
Ribosomal L27 protein
K02899
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.0000000000000000000000000000000006711
132.0
View
YYD3_k127_5612891_6
This protein binds to 23S rRNA in the presence of protein L20
K02888
-
-
0.00000000000000000000000000008012
118.0
View
YYD3_k127_5617544_0
Belongs to the class-I aminoacyl-tRNA synthetase family
K01883,K15526
GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
6.1.1.16,6.3.1.13
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293
370.0
View
YYD3_k127_5617544_1
FeS cluster assembly scaffold protein NifU
K04488
-
-
0.000000000000000000000062
98.0
View
YYD3_k127_5617544_2
Rubrerythrin
-
-
-
0.0001693
51.0
View
YYD3_k127_5626027_0
Belongs to the bacterial glucokinase family
K00845
-
2.7.1.2
0.00000000000000000000000000000000000000000000000000000000000000000000000002256
277.0
View
YYD3_k127_5626027_1
Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
K00036
GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
1.1.1.363,1.1.1.49
0.0000000000000000000000000000000000000000015
160.0
View
YYD3_k127_5626027_2
Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
K01057
-
3.1.1.31
0.00000000000000000000000000000000000000002381
167.0
View
YYD3_k127_5626027_3
Ribose 5-phosphate isomerase
K01808
-
5.3.1.6
0.00000000007609
63.0
View
YYD3_k127_567148_0
associated with various cellular activities
K03695,K03696
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443
547.0
View
YYD3_k127_567148_1
PFAM PfkB domain protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009683
362.0
View
YYD3_k127_567148_2
ribosomal large subunit export from nucleus
-
-
-
0.000000000000000000000000000000000000005919
169.0
View
YYD3_k127_567148_3
Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
K02257
GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
2.5.1.141
0.00000000000000000000000000000000000004654
162.0
View
YYD3_k127_567148_4
cytochrome oxidase assembly
K02259
-
-
0.0000000000000000000000000000003843
134.0
View
YYD3_k127_5675440_0
Belongs to the MurCDEF family
K01924
-
6.3.2.8
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006943
494.0
View
YYD3_k127_5675440_1
Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
K02563
-
2.4.1.227
0.000000000000000000000000000000000000000000009145
173.0
View
YYD3_k127_5682913_0
Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
K03086
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137
470.0
View
YYD3_k127_5682913_1
TIGRFAM dinuclear metal center protein, YbgI SA1388 family
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000001746
254.0
View
YYD3_k127_5682913_2
Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
K03086
-
-
0.000000000000000000000000000000000000000000008673
172.0
View
YYD3_k127_5682913_3
C4-type zinc ribbon domain
K07164
-
-
0.00000000000000000000000000000000007556
153.0
View
YYD3_k127_5682913_4
Reverse transcriptase-like
K03469,K06864,K22316
GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006401,GO:0006725,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016891,GO:0016893,GO:0017144,GO:0018130,GO:0019438,GO:0019439,GO:0032296,GO:0033013,GO:0033014,GO:0034641,GO:0034655,GO:0042364,GO:0042578,GO:0043170,GO:0043755,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046700,GO:0051186,GO:0051188,GO:0071667,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576
3.1.26.4,3.1.3.73
0.000000000000000000000000000007502
130.0
View
YYD3_k127_5682913_6
RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
K02316
GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944
-
0.0000001934
62.0
View
YYD3_k127_5682913_7
-
-
-
-
0.00001158
48.0
View
YYD3_k127_5689201_0
Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
K00820
-
2.6.1.16
2.472e-220
699.0
View
YYD3_k127_5689201_1
Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
K04042
-
2.3.1.157,2.7.7.23
0.0000000000000000000000000000000002802
134.0
View
YYD3_k127_5704989_0
Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA)
K00912
-
2.7.1.130
0.000000000000000000000000000000000000000000000000000008645
203.0
View
YYD3_k127_5704989_1
lipid A biosynthesis acyltransferase
K02517
-
2.3.1.241
0.000000000000000000000000000000000000000004436
176.0
View
YYD3_k127_5704989_2
D,D-heptose 1,7-bisphosphate phosphatase
K01089,K01929,K02843,K03273
GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0033692,GO:0034200,GO:0034637,GO:0034645,GO:0042578,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046872,GO:0046914,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509
3.1.3.15,3.1.3.82,3.1.3.83,4.2.1.19,6.3.2.10
0.0000000000000000000000004533
120.0
View
YYD3_k127_571717_0
PFAM sigma-54 factor interaction domain-containing protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023
423.0
View
YYD3_k127_571717_1
PFAM Cys Met metabolism
K01739,K01760
-
2.5.1.48,4.4.1.8
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006625
411.0
View
YYD3_k127_571717_2
Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009899
327.0
View
YYD3_k127_571717_3
ATP-binding region, ATPase domain protein domain protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000001845
261.0
View
YYD3_k127_571717_4
Transcriptional regulator
-
-
-
0.0000000000000000000000002247
111.0
View
YYD3_k127_571717_5
integral membrane protein
-
-
-
0.00002189
53.0
View
YYD3_k127_5737233_0
Acetyl-coenzyme A transporter 1
K08218
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008105
563.0
View
YYD3_k127_5737233_1
Belongs to the peptidase S16 family
K01338,K04076
-
3.4.21.53
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003104
537.0
View
YYD3_k127_5737233_2
cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
K21562
-
-
0.0006797
48.0
View
YYD3_k127_5747700_0
Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
K03981
-
5.3.4.1
0.00000000000000000000000000000000000000000000000000000000000000000000006013
255.0
View
YYD3_k127_5747700_1
SCO1/SenC
K07152
-
-
0.000000000000000000000000000000000000000000883
160.0
View
YYD3_k127_5747700_2
SCO1/SenC
K07152
-
-
0.000000000000000000000000000000000000000007948
167.0
View
YYD3_k127_5774377_0
Methylmalonyl-CoA mutase
K01847,K01848
-
5.4.99.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002672
640.0
View
YYD3_k127_5774377_1
Acyl-CoA dehydrogenase, C-terminal domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296
394.0
View
YYD3_k127_5774377_2
Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
K19221
-
2.5.1.17
0.000000000000000000000000000000000000000000000000000001181
196.0
View
YYD3_k127_5774377_3
Acyl-CoA dehydrogenase, C-terminal domain
K00248
-
1.3.8.1
0.000000000000001004
79.0
View
YYD3_k127_5792117_0
MgtE intracellular N domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005148
390.0
View
YYD3_k127_5792117_1
Cytochrome c554 and c-prime
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065
336.0
View
YYD3_k127_5792117_2
PFAM natural resistance-associated macrophage protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000385
220.0
View
YYD3_k127_5835488_0
Anthranilate synthase component I, N terminal region
K01657,K13503
-
4.1.3.27
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102
490.0
View
YYD3_k127_5835488_1
Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
K00766,K13497
GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494
2.4.2.18,4.1.3.27
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000233
442.0
View
YYD3_k127_5838487_0
PFAM Pyruvate flavodoxin ferredoxin oxidoreductase
K00174
-
1.2.7.11,1.2.7.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005377
458.0
View
YYD3_k127_5838487_1
COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin
K00175
-
1.2.7.11,1.2.7.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004749
330.0
View
YYD3_k127_5838487_2
AcrB/AcrD/AcrF family
K03296
-
-
0.000000000000000000000000000000000000000000000000000000000000001418
226.0
View
YYD3_k127_5852990_0
3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
K07516
-
1.1.1.35
3.265e-248
788.0
View
YYD3_k127_5893637_0
Enoyl-(Acyl carrier protein) reductase
K00034,K00059
-
1.1.1.100,1.1.1.47
0.000000000000000000000000000000000000000000000000000000000000000000000001999
252.0
View
YYD3_k127_5893637_1
Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
K00286
-
1.5.1.2
0.00000000000000000000000000000000000000000000000000000000001568
216.0
View
YYD3_k127_5893637_2
Elongator protein 3, MiaB family, Radical SAM
-
-
-
0.00000000000000000000000000000000000000000000000000000002418
211.0
View
YYD3_k127_5893637_3
Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
K06997
-
-
0.00000000000000000000000000000000000000000000000000000005773
211.0
View
YYD3_k127_5893637_4
PFAM Maf family protein
K06287
-
-
0.0000000000000000000000000000000000000000000001382
175.0
View
YYD3_k127_5893637_5
Uncharacterised protein family UPF0047
-
-
-
0.000000000000000000000000000000000000001894
164.0
View
YYD3_k127_5893637_6
YGGT family
K02221
-
-
0.00000000000000000000000000005573
119.0
View
YYD3_k127_5893637_7
Belongs to the UPF0235 family
K09131
-
-
0.00000000000000000009817
96.0
View
YYD3_k127_5893637_8
Belongs to the 'phage' integrase family
K04763
-
-
0.0000000000004708
69.0
View
YYD3_k127_5915795_0
RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
K02316
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098
323.0
View
YYD3_k127_5915795_1
Yqey-like protein
K09117
-
-
0.00000000000000000000000000000000000001487
148.0
View
YYD3_k127_5915795_2
Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
K01496,K11755
GO:0008150,GO:0040007
3.5.4.19,3.6.1.31
0.0000000000000000000000000000000000004239
142.0
View
YYD3_k127_5915795_3
PFAM Histidine triad (HIT) protein
K02503
-
-
0.000000000000000000000000000000000001595
148.0
View
YYD3_k127_5915795_4
Belongs to the bacterial ribosomal protein bS21 family
K02970
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904
-
0.000000000000000000000002671
104.0
View
YYD3_k127_5915795_5
Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions
K09913
-
2.4.2.1,2.4.2.2
0.00000000000000000128
93.0
View
YYD3_k127_5916734_0
General secretory system II, protein E domain protein
K02652
-
-
2.864e-235
739.0
View
YYD3_k127_5916734_1
Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis
K01042
GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576
2.9.1.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356
423.0
View
YYD3_k127_5916734_10
antisigma factor binding
-
-
-
0.0000000000000008313
82.0
View
YYD3_k127_5916734_2
Uncharacterized protein conserved in bacteria (DUF2344)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005712
338.0
View
YYD3_k127_5916734_3
HNH endonuclease
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001668
281.0
View
YYD3_k127_5916734_4
regulatory protein GntR HTH
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000003427
241.0
View
YYD3_k127_5916734_5
metal-dependent phosphohydrolase HD region
-
-
-
0.000000000000000000000000000000000000000000000000001809
199.0
View
YYD3_k127_5916734_6
Xylose isomerase-like TIM barrel
-
-
-
0.000000000000000000000000000000000000000000000000103
189.0
View
YYD3_k127_5916734_7
Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
K00014
-
1.1.1.25
0.00000000000000000000000000000000000000000000002371
186.0
View
YYD3_k127_5916734_8
twitching motility protein
K02669
-
-
0.0000000000000000000000000000000000000000008671
158.0
View
YYD3_k127_5916734_9
sigma factor antagonist activity
K04757
-
2.7.11.1
0.00000000000000001511
98.0
View
YYD3_k127_5925598_0
Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458
330.0
View
YYD3_k127_5925598_1
PFAM BadF BadG BcrA BcrD ATPase family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000006937
280.0
View
YYD3_k127_5925598_2
4Fe-4S ferredoxin iron-sulfur binding domain protein
K07138
-
-
0.000000000000003177
76.0
View
YYD3_k127_5954882_0
Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
K01681
GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0045333,GO:0046459,GO:0047456,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:1901363
4.2.1.3
1.297e-250
788.0
View
YYD3_k127_5954882_1
CBS domain
K04767
-
-
0.0000000006005
64.0
View
YYD3_k127_5954882_2
Cytochrome c
-
-
-
0.00000003538
63.0
View
YYD3_k127_5960308_0
Peptidase U62 modulator of DNA gyrase
K03568
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234
474.0
View
YYD3_k127_5960308_1
SNARE associated Golgi protein
K01077
-
3.1.3.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008756
299.0
View
YYD3_k127_5960308_2
-
-
-
-
0.00000000000000000000000008521
113.0
View
YYD3_k127_5971801_0
Outer membrane usher protein
K07347
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155
618.0
View
YYD3_k127_5971801_1
Spore Coat Protein U domain
-
-
-
0.0000000000000000000000000004656
118.0
View
YYD3_k127_598793_0
MoeA domain protein domain I and II
K03750
-
2.10.1.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395
462.0
View
YYD3_k127_598793_1
PBP superfamily domain
K05772
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078
348.0
View
YYD3_k127_598793_2
Molybdopterin oxidoreductase Fe4S4 domain
K00123
-
1.17.1.9
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000066
334.0
View
YYD3_k127_598793_3
regulatory protein LysR
K02019
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514
325.0
View
YYD3_k127_598793_4
Binding-protein-dependent transport system inner membrane component
K05773
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006331
280.0
View
YYD3_k127_598793_5
ABC transporter
K06857
-
3.6.3.55
0.00000000000000000000000000000000000000000000000000000000001809
213.0
View
YYD3_k127_6037270_0
Calcineurin-like phosphoesterase
K07098
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004751
349.0
View
YYD3_k127_6037270_1
Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
-
-
-
0.00000000002873
65.0
View
YYD3_k127_6037270_2
Putative regulatory protein
-
-
-
0.00003453
46.0
View
YYD3_k127_6059036_0
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
-
-
-
0.0000871
55.0
View
YYD3_k127_6077480_0
CHASE2
K01768
-
4.6.1.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001305
292.0
View
YYD3_k127_6077480_1
Thioredoxin-like domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000001355
218.0
View
YYD3_k127_6077480_2
Hypothetical glycosyl hydrolase family 13
K11931,K21478
GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016787,GO:0016810,GO:0043170,GO:0043412,GO:0071704,GO:0098732
-
0.00000000000000000000000000000000000000000000000000000000147
215.0
View
YYD3_k127_6089354_0
PFAM AIR synthase related protein
K01933
-
6.3.3.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394
389.0
View
YYD3_k127_6089354_1
Formyl transferase
K11175
-
2.1.2.2
0.00000000000000000000000000000000000000000000000000000000000000000000000003118
265.0
View
YYD3_k127_6089354_2
nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
-
-
-
0.0000000000000000000000000000000000000113
154.0
View
YYD3_k127_6089354_3
DUF218 domain
-
-
-
0.0000000000000000007851
94.0
View
YYD3_k127_6089354_4
Tetratricopeptide repeat
-
-
-
0.0000000000004943
81.0
View
YYD3_k127_6089354_5
Protein of unknown function (DUF3047)
-
-
-
0.000003247
57.0
View
YYD3_k127_609365_0
ATP-grasp domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219
473.0
View
YYD3_k127_609365_1
esterase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752
333.0
View
YYD3_k127_609365_2
sister chromatid segregation
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000005562
270.0
View
YYD3_k127_609365_3
Enoyl-(Acyl carrier protein) reductase
K13775
-
-
0.000000000000000000000000000000000000007025
145.0
View
YYD3_k127_609365_4
cellulase activity
-
-
-
0.0000000000000000000000000000006308
138.0
View
YYD3_k127_6115511_0
Nitrogenase component 1 type Oxidoreductase
K02587
-
-
0.0
1377.0
View
YYD3_k127_6115511_1
PFAM Pyruvate carboxyltransferase
K02594
-
2.3.3.14
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005088
391.0
View
YYD3_k127_6115511_2
Belongs to the NifD NifK NifE NifN family
K02592
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196
361.0
View
YYD3_k127_6115511_3
PFAM Sulphate transporter
K03321
-
-
0.000000000000000000000000000000000000000000000000000000000000000000001121
265.0
View
YYD3_k127_6115511_4
4Fe-4S binding domain
-
-
-
0.0000000000000000000000000000000000000000002953
159.0
View
YYD3_k127_6115511_5
Dinitrogenase iron-molybdenum cofactor biosynthesis protein
K02596
-
-
0.0000000000000000000000000000000001153
154.0
View
YYD3_k127_6118403_0
Belongs to the heme-copper respiratory oxidase family
K00404
-
1.9.3.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383
391.0
View
YYD3_k127_6118403_1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004566
350.0
View
YYD3_k127_6118403_2
Rossmann fold nucleotide-binding protein
K06966
-
3.2.2.10
0.00000000000000000000000000000000009459
137.0
View
YYD3_k127_6187969_0
Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
K01950
-
6.3.5.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299
557.0
View
YYD3_k127_6187969_1
Major Facilitator Superfamily
-
-
-
0.000000001226
72.0
View
YYD3_k127_6189659_0
PQQ enzyme repeat
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000408
241.0
View
YYD3_k127_6189659_1
-
-
-
-
0.0000000000000000000000000000000000000000000007881
184.0
View
YYD3_k127_6189659_2
Periplasmic copper-binding protein (NosD)
-
-
-
0.0000000003692
73.0
View
YYD3_k127_6189659_3
PFAM DNA polymerase, beta domain protein region
-
-
-
0.00002368
54.0
View
YYD3_k127_6201394_0
PFAM Glycosyl transferases group 1
K13057
-
2.4.1.245
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605
563.0
View
YYD3_k127_6201394_1
Glycosyltransferase family 20
K00697,K13057,K20436
-
2.4.1.15,2.4.1.245,2.4.1.347,2.5.1.135
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427
372.0
View
YYD3_k127_6201394_2
transferase activity, transferring glycosyl groups
-
-
-
0.000000000000000000000000000000000000000000000118
176.0
View
YYD3_k127_6201394_3
trehalose biosynthetic process
K01087
-
3.1.3.12
0.0000000000000000000000000000000000000000000002491
178.0
View
YYD3_k127_6210132_0
polyribonucleotide nucleotidyltransferase activity
K00962
GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575
2.7.7.8
5.344e-239
761.0
View
YYD3_k127_6210132_1
PFAM peptidase M16 domain protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004732
367.0
View
YYD3_k127_6210132_2
Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
K01756
-
4.3.2.2
0.000000000000000000000000000000000000000000000000000000000001145
216.0
View
YYD3_k127_6210132_3
Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
K03177
GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481
5.4.99.25
0.000000000000000000000000000000000000000000000000000000002126
218.0
View
YYD3_k127_6210132_4
This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
K01520
GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576
3.6.1.23
0.0000000000000000000000000000000000000000000000002169
183.0
View
YYD3_k127_6210132_5
PFAM phosphoesterase, RecJ domain protein
K06881
-
3.1.13.3,3.1.3.7
0.000000000000000000000000000000000000000000000004486
177.0
View
YYD3_k127_6210132_6
Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
K02956
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.0000000000000000000000000000000003799
133.0
View
YYD3_k127_622182_0
amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
K01873
GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.9
0.0
1080.0
View
YYD3_k127_622182_1
Efflux ABC transporter permease protein
K02004
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000264
312.0
View
YYD3_k127_622182_10
response regulator
-
-
-
0.0008741
42.0
View
YYD3_k127_622182_2
ABC transporter, ATP-binding protein
K02003
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000003075
271.0
View
YYD3_k127_622182_3
Belongs to the NadC ModD family
K00767
GO:0003674,GO:0003824,GO:0004514,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016054,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034213,GO:0034641,GO:0034654,GO:0042737,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0046483,GO:0046496,GO:0046700,GO:0046874,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0072526,GO:0090407,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576
2.4.2.19
0.0000000000000000000000000000000000000000000000000000000000000005069
247.0
View
YYD3_k127_622182_4
Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
K11782
-
4.2.1.151
0.00000000000000000000000000000000000000000000000000000922
213.0
View
YYD3_k127_622182_5
Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
K02005
-
-
0.000000000000000000000000000000000007022
154.0
View
YYD3_k127_622182_6
6-pyruvoyl tetrahydropterin synthase
K01737
-
4.1.2.50,4.2.3.12
0.0000000000000000000000000000000001702
145.0
View
YYD3_k127_622182_7
Domain of unknown function (DUF1858)
-
-
-
0.000000000000000003036
96.0
View
YYD3_k127_622182_8
Amidohydrolase family
-
-
-
0.00000003119
59.0
View
YYD3_k127_622182_9
Outer membrane efflux protein
-
-
-
0.00003355
52.0
View
YYD3_k127_623440_0
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
K00333,K13378
-
1.6.5.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908
456.0
View
YYD3_k127_623440_1
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
K00331
-
1.6.5.3
0.0000000000000000000000000000000000000000000000000000000000203
217.0
View
YYD3_k127_623440_2
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
K00332
-
1.6.5.3
0.000000000000000000000000000000000000000001092
162.0
View
YYD3_k127_623440_3
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
K00330
-
1.6.5.3
0.0000000000000000000000000000000000005081
143.0
View
YYD3_k127_623440_4
Peptidase family U32 C-terminal domain
K08303
-
-
0.000000000000000000005158
105.0
View
YYD3_k127_6235971_0
Periplasmic binding protein
K01999
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727
479.0
View
YYD3_k127_6235971_1
PFAM Branched-chain amino acid transport system permease component
K01998
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004003
438.0
View
YYD3_k127_6235971_2
Belongs to the binding-protein-dependent transport system permease family
K01997
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286
375.0
View
YYD3_k127_6235971_3
branched-chain amino acid
K01995,K01998
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987
302.0
View
YYD3_k127_6235971_4
PFAM ABC transporter related
K01996
-
-
0.000000000000000000000000000000000000000000000000002775
201.0
View
YYD3_k127_6240076_0
PFAM Extracellular ligand-binding receptor
K01999
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088
332.0
View
YYD3_k127_6240076_1
PFAM histone deacetylase superfamily
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001713
310.0
View
YYD3_k127_6240076_2
Belongs to the binding-protein-dependent transport system permease family
K11960
-
-
0.000000000000000000000000000000000000000000000000000000438
204.0
View
YYD3_k127_6240076_3
AAA domain, putative AbiEii toxin, Type IV TA system
K01996
-
-
0.0000000000000000000000000000000000000000000003704
184.0
View
YYD3_k127_6240076_4
ABC transporter
K01995
-
-
0.000000000000000000000000000000000000000000863
179.0
View
YYD3_k127_6240076_5
PFAM peptidase U32
K08303
-
-
0.0000000000000000000000000000000000001615
146.0
View
YYD3_k127_6240076_6
Belongs to the binding-protein-dependent transport system permease family
K01998,K11961
-
-
0.000000000000000000000000000001992
133.0
View
YYD3_k127_6240076_7
Domain in cystathionine beta-synthase and other proteins.
K04767
-
-
0.000000000000000000000009819
119.0
View
YYD3_k127_6260492_0
PFAM Aldehyde ferredoxin oxidoreductase
K03738
-
1.2.7.5
2.641e-250
784.0
View
YYD3_k127_6260492_1
PFAM Class II aldolase
K01628
-
4.1.2.17
0.000000000000000000000000000000000000000000000000000000000000000000000000000004264
287.0
View
YYD3_k127_6291453_0
Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism
K00990
-
2.7.7.59
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008726
454.0
View
YYD3_k127_6291453_1
Ami_3
K01448
-
3.5.1.28
0.000000000000000000000000000000000000000000000000000000000000000001254
236.0
View
YYD3_k127_6303820_0
Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
K03655
-
3.6.4.12
6.075e-203
663.0
View
YYD3_k127_6303820_1
Belongs to the CarB family
K01955
-
6.3.5.5
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615
413.0
View
YYD3_k127_6303820_2
Peptidase family M23
-
-
-
0.00000000000000000000000000000005352
132.0
View
YYD3_k127_6308540_0
Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force
K15987
-
3.6.1.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009026
385.0
View
YYD3_k127_6308540_1
WD40 repeat-like protein
-
-
-
0.0000000000000000000000000000000004562
148.0
View
YYD3_k127_6311936_0
phosphotransferase related to Ser Thr protein kinases
K07102
-
2.7.1.221
0.0000000000000000000000000000000000000000000000000003527
198.0
View
YYD3_k127_6311936_1
Nucleotidyl transferase
K00966,K16881
-
2.7.7.13,5.4.2.8
0.000000000000000000000000000000000000000000005851
187.0
View
YYD3_k127_6311936_2
Xylose isomerase-like TIM barrel
-
-
-
0.000000000000000000007684
105.0
View
YYD3_k127_6342627_0
PFAM Type II secretion system protein E
K02454
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329
564.0
View
YYD3_k127_6342627_1
Type II and III secretion system protein
K02453
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118
465.0
View
YYD3_k127_6342627_2
Repeats in polycystic kidney disease 1 (PKD1) and other proteins
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008502
322.0
View
YYD3_k127_6342627_3
General secretion pathway protein F
K02455,K02653
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000003012
281.0
View
YYD3_k127_6342627_4
Type II secretion system (T2SS), protein G
K02456
-
-
0.000000000000000000000000000000000000000000000000000000005097
203.0
View
YYD3_k127_6342627_5
Type II secretion system (T2SS), protein J
K02459
-
-
0.00000000000000001632
94.0
View
YYD3_k127_6342627_7
General secretion pathway protein C
K02452
GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705
-
0.00002827
55.0
View
YYD3_k127_6342627_8
general secretion pathway protein
-
-
-
0.0003351
51.0
View
YYD3_k127_6353904_0
Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
-
-
-
0.0
1317.0
View
YYD3_k127_6353904_1
Outer membrane efflux protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000005492
250.0
View
YYD3_k127_6353904_2
-
-
-
-
0.00000000000000000000000000000000000000000000000000000000000005288
221.0
View
YYD3_k127_6353904_3
Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
-
-
-
0.0000000000000000000000000000000000000000000000000271
194.0
View
YYD3_k127_63692_0
Belongs to the cysteine synthase cystathionine beta- synthase family
K01738
-
2.5.1.47
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005771
496.0
View
YYD3_k127_63692_1
Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2)
K03183
-
2.1.1.163,2.1.1.201
0.00000000000000000000000000000000000000000000000000000000000000000000003873
247.0
View
YYD3_k127_63692_2
His Kinase A (phosphoacceptor) domain
-
-
-
0.0000000000000000000000000000000000000000001045
164.0
View
YYD3_k127_63692_3
iron ion homeostasis
-
-
-
0.0000000000000000000000001389
119.0
View
YYD3_k127_63692_4
-
-
-
-
0.0000007356
60.0
View
YYD3_k127_63692_5
Aminopeptidase
-
-
-
0.0002279
49.0
View
YYD3_k127_6395044_0
ATP-grasp domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094
422.0
View
YYD3_k127_6395044_1
B12 binding domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007676
293.0
View
YYD3_k127_6395044_2
SMART Elongator protein 3 MiaB NifB
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000003691
234.0
View
YYD3_k127_6414492_0
PFAM AMP-dependent synthetase and ligase
K00666
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006422
310.0
View
YYD3_k127_6414492_1
Transcriptional regulator
-
-
-
0.00000000000000000000000000000000000000000000000000000000001399
214.0
View
YYD3_k127_6433596_0
TolB amino-terminal domain
K03641
GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000003145
290.0
View
YYD3_k127_6433596_1
TonB C terminal
-
-
-
0.00000000003912
70.0
View
YYD3_k127_6433908_0
Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
K00147
GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114
1.2.1.41
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659
512.0
View
YYD3_k127_6433908_1
Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
K00969
-
2.7.7.18
0.000000000000000000000000000000000000000005902
162.0
View
YYD3_k127_6433908_2
Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
K09710
-
-
0.000000000000000000000000000000001019
136.0
View
YYD3_k127_6438966_0
Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
K00179
-
1.2.7.8
1.559e-233
737.0
View
YYD3_k127_6438966_1
6-phosphofructokinase activity
K00850,K21071
-
2.7.1.11,2.7.1.90
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032
471.0
View
YYD3_k127_6438966_2
Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
K03470
GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576
3.1.26.4
0.000000000000000000000000000000000001003
146.0
View
YYD3_k127_6438966_3
Belongs to the UPF0102 family
K07460
-
-
0.000000000000000006397
93.0
View
YYD3_k127_6492255_0
In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
K02335
-
2.7.7.7
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038
580.0
View
YYD3_k127_6492255_1
Belongs to the sigma-70 factor family. ECF subfamily
K03088
-
-
0.000000000000000000004514
97.0
View
YYD3_k127_6492255_2
DNA polymerase I
K02335
-
2.7.7.7
0.00000000000000005141
86.0
View
YYD3_k127_6492255_3
RDD family
-
-
-
0.0000000000002407
79.0
View
YYD3_k127_6493208_0
GTP-binding protein LepA C-terminus
K03596
-
-
5.983e-270
842.0
View
YYD3_k127_6493208_1
Polysaccharide biosynthesis protein
K01784
-
5.1.3.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007996
370.0
View
YYD3_k127_6493208_2
Belongs to the peptidase S26 family
K03100
-
3.4.21.89
0.0000000000188
70.0
View
YYD3_k127_6526050_0
Peptidase family M1 domain
-
-
-
4.022e-200
639.0
View
YYD3_k127_6526050_1
L-glutamate biosynthetic process
K00265,K00284
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016020,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
1.4.1.13,1.4.1.14,1.4.7.1
0.00000000000000000000000000000000000000000000000000000001169
204.0
View
YYD3_k127_6536010_0
Peptidase family U32
-
-
-
1.611e-202
636.0
View
YYD3_k127_6536010_1
Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2)
K03183
-
2.1.1.163,2.1.1.201
0.0000000000000000000000000000000000000000000000000000000000000000000002799
262.0
View
YYD3_k127_6542415_0
AcrB/AcrD/AcrF family
K03296
-
-
7.393e-214
673.0
View
YYD3_k127_6542415_1
Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788
370.0
View
YYD3_k127_6542415_2
Bacterial regulatory proteins, tetR family
-
-
-
0.0000000000000000000000000000000000000000000000000001767
193.0
View
YYD3_k127_6542415_3
Thioesterase
K18700
-
3.1.2.29
0.00000000000000000000000000000000000000000000000004222
183.0
View
YYD3_k127_6542415_4
DJ-1/PfpI family
K05520
-
3.5.1.124
0.0000000000000000000000000000000000000007696
155.0
View
YYD3_k127_6556957_0
Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
K02654
-
3.4.23.43
0.000000000000000000000000000000000000000000000000000000000000000002282
246.0
View
YYD3_k127_6556957_1
transferase activity, transferring glycosyl groups
-
-
-
0.000000000000000000000000000000000000000000000000000001058
201.0
View
YYD3_k127_656630_0
NfeD-like C-terminal, partner-binding
K07403
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504
408.0
View
YYD3_k127_656630_1
PFAM Band 7 protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004701
379.0
View
YYD3_k127_656630_2
Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
K07568
-
2.4.99.17
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663
327.0
View
YYD3_k127_656630_3
S-adenosylmethionine-dependent methyltransferase
K06969
-
2.1.1.191
0.00000000000000000000000000000000000000000000000000000000000000000007213
241.0
View
YYD3_k127_656630_4
Stage II sporulation D domain protein
K06381
-
-
0.0000000000000000000000000000000000000000000001608
184.0
View
YYD3_k127_656630_5
Bacterial transcriptional activator domain
-
-
-
0.000000003026
61.0
View
YYD3_k127_6569811_0
MmgE PrpD family protein
K01720
-
4.2.1.79
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167
577.0
View
YYD3_k127_6569811_1
(2R)-phospho-3-sulfolactate synthase (ComA)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595
422.0
View
YYD3_k127_6575886_0
von Willebrand factor (vWF) type A domain
K03404,K03405
-
6.6.1.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391
496.0
View
YYD3_k127_6606944_0
Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
K00600
-
2.1.2.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431
602.0
View
YYD3_k127_6606944_1
Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
K11752
-
1.1.1.193,3.5.4.26
0.000000000000000000000000000000000000000000000000000000000000000000000000006986
267.0
View
YYD3_k127_6606944_2
PFAM CMP dCMP deaminase zinc-binding
K01493
-
3.5.4.12
0.0000000000000000000000000000000000000000000000000000000000000000002592
234.0
View
YYD3_k127_6606944_3
ATP cone domain
K07738
-
-
0.00000000000000000000000000000000000000000000000000000005162
207.0
View
YYD3_k127_6606944_4
Ribose 5-phosphate isomerase
K01808
-
5.3.1.6
0.000000000000000000000000000000000000001094
155.0
View
YYD3_k127_6606944_5
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
K09458
-
2.3.1.179
0.00000000000008574
72.0
View
YYD3_k127_6618712_0
Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
K01963
-
2.1.3.15,6.4.1.2
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008426
338.0
View
YYD3_k127_6618712_1
Belongs to the folylpolyglutamate synthase family
K11754
-
6.3.2.12,6.3.2.17
0.00000000000000000000000000000000000000000000000000004845
213.0
View
YYD3_k127_6618712_2
The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
K01695
-
4.2.1.20
0.00000000000000000000000000001045
123.0
View
YYD3_k127_6619873_0
Molybdopterin oxidoreductase Fe4S4 domain
K00123
-
1.17.1.9
0.0
1456.0
View
YYD3_k127_6619873_1
Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
K02379
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009823
524.0
View
YYD3_k127_6619873_2
4Fe-4S dicluster domain
K00124
GO:0005575,GO:0005623,GO:0009326,GO:0032991,GO:0042597,GO:0044464,GO:1902494
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251
406.0
View
YYD3_k127_6619873_3
Necessary for formate dehydrogenase activity
K02380
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003199
349.0
View
YYD3_k127_6619873_4
Prokaryotic cytochrome b561
K00127
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000001895
277.0
View
YYD3_k127_6619873_5
Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
K03753,K13818
-
2.7.7.77
0.00000000000000000000000000000000000000000008993
182.0
View
YYD3_k127_6619873_6
Belongs to the binding-protein-dependent transport system permease family
K01998
-
-
0.0002445
46.0
View
YYD3_k127_6624011_0
3-carboxymuconate cyclase quinoprotein amine dehydrogenase, beta chain-like
-
-
-
0.0000000000000000000000000000000000000000000000000000001097
215.0
View
YYD3_k127_6624011_1
Belongs to the alpha-IPM synthase homocitrate synthase family
K02594
-
2.3.3.14
0.00000000000000000000000000000000000000002001
165.0
View
YYD3_k127_6624011_2
PFAM Methyltransferase type 11
-
-
-
0.00000000000004801
84.0
View
YYD3_k127_6624011_3
Protein of unknown function (DUF1566)
-
-
-
0.00002513
56.0
View
YYD3_k127_662409_0
Malic enzyme, NAD binding domain
K00027
-
1.1.1.38
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466
544.0
View
YYD3_k127_662409_1
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
K15778
-
5.4.2.2,5.4.2.8
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222
543.0
View
YYD3_k127_662409_2
COGs COG1331 Highly conserved protein containing a thioredoxin domain
K06888
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002314
292.0
View
YYD3_k127_662409_3
Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
K06153
-
3.6.1.27
0.0000000000000000000000000000000000000000003988
168.0
View
YYD3_k127_66334_0
COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
K02481
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278
414.0
View
YYD3_k127_66334_1
Histidine kinase
-
-
-
0.00000000000000000000000000000007057
132.0
View
YYD3_k127_66334_2
Cache_2
K02480
-
2.7.13.3
0.0000000001536
74.0
View
YYD3_k127_6651562_0
DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
K04485
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273
508.0
View
YYD3_k127_6651562_1
Belongs to the FPP GGPP synthase family
K02523,K13789
-
2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90
0.000000000000000000000000000000000000000000000000000000000000000000000000000000002822
282.0
View
YYD3_k127_6651562_2
Belongs to the LarC family
K09121
-
4.99.1.12
0.000000000000000000000000000000000000000000000000000000000000000000000000001775
266.0
View
YYD3_k127_6651562_3
Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
K02427
-
2.1.1.166
0.000000000000000000000000000000000000000000000002097
179.0
View
YYD3_k127_6651562_4
general secretion pathway protein G
K02456
-
-
0.0000000007721
68.0
View
YYD3_k127_6651562_5
PFAM Type II secretion system protein E
K02652
-
-
0.0000138
49.0
View
YYD3_k127_6658560_0
PhoH-like protein
K06217
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006804
391.0
View
YYD3_k127_6658560_1
Domain of unknown function (DUF4388)
-
-
-
0.00000000000000000000000000000009164
135.0
View
YYD3_k127_6658560_2
7TM receptor with intracellular HD hydrolase
K07037
-
-
0.00000002714
65.0
View
YYD3_k127_6660445_0
Belongs to the peptidase M48B family
K03799
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312
372.0
View
YYD3_k127_6660445_1
Molecular chaperone
-
-
-
0.000000000000000009972
85.0
View
YYD3_k127_6660445_2
Belongs to the ClpA ClpB family
K03696
-
-
0.0000004134
59.0
View
YYD3_k127_678169_0
Peptidase dimerisation domain
K12941
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209
366.0
View
YYD3_k127_678169_1
Ribosomal protein L11 methyltransferase
K02687
-
-
0.000000000000000000000000000000000000000000000000007788
190.0
View
YYD3_k127_678169_2
Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
K07456
-
-
0.000000000000000000003748
102.0
View
YYD3_k127_679779_0
Domain of unknown function (DUF1731)
K07071
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204
394.0
View
YYD3_k127_679779_1
Regulatory protein GntR HTH
K05799
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837
322.0
View
YYD3_k127_679779_2
FAD linked oxidases, C-terminal domain
K00104
-
1.1.3.15
0.0000000000000000000001827
99.0
View
YYD3_k127_679779_3
Protein of unknown function (DUF1722)
-
-
-
0.000000000000002155
78.0
View
YYD3_k127_6846251_0
Curli production assembly/transport component CsgG
-
-
-
0.0000000000000000000000000000000000000000000000000003595
201.0
View
YYD3_k127_6846251_1
Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
K00384
-
1.8.1.9
0.0000000000000000000000000000000005178
143.0
View
YYD3_k127_6846251_2
PFAM AAA ATPase central domain protein
K07478
-
-
0.000000000000000000000001634
104.0
View
YYD3_k127_6846251_3
Divergent 4Fe-4S mono-cluster
K05337
-
-
0.00000000000000000000001933
101.0
View
YYD3_k127_6846251_4
Lipoprotein
-
-
-
0.000000000000000004276
93.0
View
YYD3_k127_6848809_0
Carboxyl transferase domain
K01966
-
2.1.3.15,6.4.1.3
1.878e-249
779.0
View
YYD3_k127_6848809_1
4Fe-4S dicluster domain
K11473
-
-
0.00000000000000000000000000000000000000005087
161.0
View
YYD3_k127_686102_0
GYD domain
-
-
-
0.000000000000000000000000000000000001886
143.0
View
YYD3_k127_686102_1
Sugar (and other) transporter
K03446
-
-
0.00000000000000000000000000000000002946
138.0
View
YYD3_k127_686102_2
Aminoacyl-tRNA editing domain
-
-
-
0.0000000000000000000000000000000001449
141.0
View
YYD3_k127_686102_3
CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin)
-
-
-
0.000000000000000000000001858
117.0
View
YYD3_k127_686102_4
PFAM regulatory protein TetR
-
-
-
0.000000000000000000000003722
110.0
View
YYD3_k127_705023_0
-
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000001521
244.0
View
YYD3_k127_705023_1
Predicted permease
-
-
-
0.00000000000000000000000000000000000000000000000000003361
199.0
View
YYD3_k127_705023_2
HEAT repeat
-
-
-
0.000000000000000000000000004932
119.0
View
YYD3_k127_706372_0
Belongs to the PEP-utilizing enzyme family
K01006
-
2.7.9.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176
426.0
View
YYD3_k127_706372_1
Required for chromosome condensation and partitioning
K03529
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005222
311.0
View
YYD3_k127_70666_0
Phosphoribosylglycinamide synthetase, C domain
K01945
-
6.3.4.13
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204
520.0
View
YYD3_k127_70666_1
Bifunctional purine biosynthesis protein PurH
K00602
-
2.1.2.3,3.5.4.10
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009242
486.0
View
YYD3_k127_70666_2
Protein of unknown function (DUF1015)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869
349.0
View
YYD3_k127_70666_3
Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
K01588
-
5.4.99.18
0.00000000000000000000000000000000000000000000006432
173.0
View
YYD3_k127_70666_4
Belongs to the SUA5 family
K07566
-
2.7.7.87
0.000000000000000000000000000000000002695
147.0
View
YYD3_k127_739565_0
Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
K03186
-
2.5.1.129
0.0000000000000000000000000000000000000000000001864
172.0
View
YYD3_k127_739565_1
cheY-homologous receiver domain
-
-
-
0.00000000000000000000000000000001144
130.0
View
YYD3_k127_739565_2
Sigma factor PP2C-like phosphatases
K07315
-
3.1.3.3
0.000000000000000000000008352
116.0
View
YYD3_k127_739565_3
COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain
-
-
-
0.00000000000000000000001466
109.0
View
YYD3_k127_739565_4
TIGRFAM cytochrome C family protein
-
-
-
0.000000000006376
71.0
View
YYD3_k127_774970_0
Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
K02405
-
-
0.00000000000000000000000000000000000000000000000000000000004549
213.0
View
YYD3_k127_774970_1
RmuC family
K09760
-
-
0.00000000000000000000000000000000003194
149.0
View
YYD3_k127_774970_2
Zincin-like metallopeptidase
-
-
-
0.00000000000000000000000005784
113.0
View
YYD3_k127_790075_0
Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
K02377
-
1.1.1.271
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241
377.0
View
YYD3_k127_790075_1
KOW (Kyprides, Ouzounis, Woese) motif.
K05785
-
-
0.000000000000000000000000003849
117.0
View
YYD3_k127_823861_0
Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
K09761
-
2.1.1.193
0.00000000000000000000000000000000000000000000000008
186.0
View
YYD3_k127_823861_1
Ribosomal protein L11 methyltransferase
K02687
-
-
0.0000000000000000000000000000001498
128.0
View
YYD3_k127_823861_2
RDD family
-
-
-
0.0000000000000000000000009359
110.0
View
YYD3_k127_842176_0
Prismane/CO dehydrogenase family
K00198
-
1.2.7.4
2.074e-220
700.0
View
YYD3_k127_842176_1
-
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000005379
239.0
View
YYD3_k127_842176_2
Anion-transporting ATPase
K07321
-
-
0.00000000000000000000000000000000000000000000000003904
201.0
View
YYD3_k127_842176_4
PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase
-
-
-
0.0000000000000000000000000000000768
145.0
View
YYD3_k127_842176_5
4Fe-4S dicluster domain
K00196
-
-
0.0000000000000000001386
92.0
View
YYD3_k127_849950_0
Synthesizes alpha-1,4-glucan chains using ADP-glucose
K00703
GO:0003674,GO:0003824,GO:0016740,GO:0016757
2.4.1.21
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227
527.0
View
YYD3_k127_849950_1
Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
K18285
-
2.5.1.120
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002248
486.0
View
YYD3_k127_849950_2
Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
K01875
-
6.1.1.11
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007538
481.0
View
YYD3_k127_849950_3
Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2)
K11779,K11784
-
1.21.98.1,2.5.1.77
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003301
405.0
View
YYD3_k127_849950_4
Galactose-1-phosphate uridyl transferase, N-terminal domain
K00965
-
2.7.7.12
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303
365.0
View
YYD3_k127_849950_5
Histidine kinase
K07709
-
2.7.13.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651
340.0
View
YYD3_k127_849950_6
Rubrerythrin
-
-
-
0.00000000000124
75.0
View
YYD3_k127_849950_7
Metallo-beta-lactamase superfamily
K22405
-
1.6.3.4
0.000000000003181
67.0
View
YYD3_k127_849950_8
Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
K01875
-
6.1.1.11
0.000002203
60.0
View
YYD3_k127_849950_9
Rubrerythrin
-
-
-
0.00001923
55.0
View
YYD3_k127_850777_0
Catalyzes the reversible hydration of fumarate to (S)- malate
K01676
-
4.2.1.2
2.659e-277
863.0
View
YYD3_k127_858901_0
Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
K01255
-
3.4.11.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007762
311.0
View
YYD3_k127_858901_1
Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
K00765
GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
2.4.2.17
0.000000000000000000000000000000000000000007834
161.0
View
YYD3_k127_858901_2
Uncharacterized protein conserved in bacteria (DUF2064)
K09931
-
-
0.00000000000000000000000000000000000003791
154.0
View
YYD3_k127_858901_3
lyase activity
-
-
-
0.00002675
57.0
View
YYD3_k127_86647_0
MutS domain I
K03555
GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058
569.0
View
YYD3_k127_86647_1
Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
K02036
-
3.6.3.27
0.0000000000000000000008075
94.0
View
YYD3_k127_86647_2
Ami_3
K01448
-
3.5.1.28
0.00000000000000000003491
98.0
View
YYD3_k127_881799_0
IMP dehydrogenase / GMP reductase domain
K00088
-
1.1.1.205
1.406e-214
677.0
View
YYD3_k127_881799_1
Catalyzes the synthesis of GMP from XMP
K01951
GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
6.3.5.2
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761
332.0
View
YYD3_k127_881799_2
GTPase that plays an essential role in the late steps of ribosome biogenesis
K03977
-
-
0.00000000000000000000000000000000000000000000000000000000009522
212.0
View
YYD3_k127_881799_3
PFAM Ppx GppA phosphatase
K01524
-
3.6.1.11,3.6.1.40
0.0000000000000000000000000000000000000001352
171.0
View
YYD3_k127_881799_4
ribonuclease BN
-
-
-
0.00000006269
65.0
View
YYD3_k127_914127_0
Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins
K03217
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003971
344.0
View
YYD3_k127_914127_1
import. Responsible for energy coupling to the transport system
K02056,K10441,K10545,K10548,K17204
-
3.6.3.17
0.0001452
49.0
View
YYD3_k127_927787_0
B12 binding domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994
426.0
View
YYD3_k127_927787_1
Radical SAM superfamily
K06937
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177
333.0
View
YYD3_k127_927787_2
radical SAM domain protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104
319.0
View
YYD3_k127_927787_3
Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
K03634
-
-
0.00000000000000000000000000000000002397
148.0
View
YYD3_k127_928321_0
Arginyl-tRNA synthetase
K01887
GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.19
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113
565.0
View
YYD3_k127_928321_1
Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
K01657
-
4.1.3.27
0.000000006279
59.0
View
YYD3_k127_928321_2
Sporulation related domain
-
-
-
0.00003941
57.0
View
YYD3_k127_941748_0
PFAM CoA-binding domain protein
K01905,K22224
-
6.2.1.13
5.687e-199
643.0
View
YYD3_k127_941748_1
Catalyzes the reversible oxidation of malate to oxaloacetate
K00024
-
1.1.1.37
0.000000000000000000000000000000000000000000000000000000000000000000000000000000006951
274.0
View
YYD3_k127_941748_2
DRTGG domain
K13788
-
2.3.1.8
0.000000000000000000000000000000000000000000000000000000000000000001055
259.0
View
YYD3_k127_941748_3
Belongs to the ompA family
K03286
-
-
0.000000000002186
75.0
View
YYD3_k127_94898_0
Histidine kinase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004562
589.0
View
YYD3_k127_94898_1
Tetratricopeptide repeat
-
-
-
0.0000000000000000000000000000000000000000001771
176.0
View
YYD3_k127_94898_2
PFAM response regulator receiver
-
-
-
0.00000000000000000000000000000000002788
157.0
View
YYD3_k127_955152_0
Belongs to the class I fructose-bisphosphate aldolase family
K01623
-
4.1.2.13
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503
467.0
View
YYD3_k127_955152_1
Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
K11065
-
1.11.1.15
0.000000000000000000000000000000000000000000000000000000000000000000000000000001002
282.0
View
YYD3_k127_955152_2
Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
K03976
-
-
0.000000000000000000000000000000000000000000000000000003873
193.0
View
YYD3_k127_955152_3
HAD-superfamily hydrolase, subfamily IA, variant 3
K07025
-
-
0.0000000000000000000000000000000000000000000000002812
184.0
View
YYD3_k127_955152_4
Transcriptional regulator, Crp Fnr family
K10914
-
-
0.000000000000001376
81.0
View
YYD3_k127_956135_0
PFAM penicillin-binding protein transpeptidase
K03587
-
3.4.16.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391
395.0
View
YYD3_k127_956135_1
Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
K03438
-
2.1.1.199
0.00000000000000000000000000000000000000000000000000000000000000000002677
241.0
View
YYD3_k127_956135_2
Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
K01928
-
6.3.2.13
0.0000000000000000000000000000000000000000000000000000000000005286
222.0
View
YYD3_k127_95700_0
PFAM NAD dependent epimerase dehydratase family
K01710,K08678
-
4.1.1.35,4.2.1.46
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006533
402.0
View
YYD3_k127_95700_1
Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108
333.0
View
YYD3_k127_95700_2
PFAM Class III cytochrome C family
-
-
-
0.00000005012
58.0
View
YYD3_k127_96809_0
Histidine kinase
-
-
-
0.0000000000000000000000000000000000000000000000000000000003631
230.0
View
YYD3_k127_96809_1
ABC transporter, phosphonate, periplasmic substrate-binding protein
K02044
-
-
0.00000000000000000000000000000000000000004729
163.0
View
YYD3_k127_96809_2
PFAM glycosyl transferase group 1
K15521
-
2.4.1.250
0.0000000000000000000000000000000006476
151.0
View
YYD3_k127_96809_3
Protein involved in cellulose biosynthesis
-
-
-
0.0000000000000000000000000002151
133.0
View
YYD3_k127_968934_0
Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
K17758,K17759
-
4.2.1.136,5.1.99.6
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007305
421.0
View
YYD3_k127_968934_1
Belongs to the aspartokinase family
K00928
-
2.7.2.4
0.00000000000000000000000000000000000000000000000003987
182.0
View
YYD3_k127_968934_2
Threonylcarbamoyl adenosine biosynthesis protein TsaE
K06925
GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360
-
0.000000000000000000000000001542
130.0
View
YYD3_k127_968934_3
Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
K00997
-
2.7.8.7
0.000000000000000000000004983
107.0
View
YYD3_k127_968934_4
Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
K03474
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617
2.6.99.2
0.00000000000000001311
83.0
View
