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Overview

ID MAG04657
Name YYD3_bin.7
Sample SMP0126
Taxonomy
Kingdom Bacteria
Phylum Bacteroidota_A
Class UBA10030
Order UBA10030
Family UBA6906
Genus JAERML01
Species
Assembly information
Completeness (%) 80.91
Contamination (%) 1.74
GC content (%) 57.0
N50 (bp) 4,744
Genome size (bp) 2,733,904

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2588

Gene name Description KEGG GOs EC E-value Score Sequence
YYD3_k127_1021469_0 PFAM Bile acid sodium symporter K03325,K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 494.0
YYD3_k127_1021469_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 488.0
YYD3_k127_1021469_10 - - - - 0.0000000000000006654 79.0
YYD3_k127_1021469_2 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 374.0
YYD3_k127_1021469_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K03286 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 321.0
YYD3_k127_1021469_4 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009654 299.0
YYD3_k127_1021469_5 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003035 269.0
YYD3_k127_1021469_6 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000000000000001186 220.0
YYD3_k127_1021469_7 - K07283 - - 0.0000000000000000000000000000000000000000000000000000003495 205.0
YYD3_k127_1021469_8 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.00000000000000000000000000000000000000000000000000009933 189.0
YYD3_k127_1021469_9 Pfam:TPM K08988 - - 0.00000000000000000000000000000000000000000001074 170.0
YYD3_k127_1061134_0 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006024 470.0
YYD3_k127_1061134_1 porphobilinogen synthase activity K01698 GO:0000287,GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0030312,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 392.0
YYD3_k127_1068323_0 Glycogen debranching enzyme - - - 0.000000000000009449 80.0
YYD3_k127_1068323_1 Amylo-alpha-1,6-glucosidase - - - 0.000167 55.0
YYD3_k127_1070296_0 nicotinamide-nucleotide amidase activity K03742,K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 356.0
YYD3_k127_1070296_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0030312,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.0000000000000000000000000000000000000000000000006097 181.0
YYD3_k127_1070296_2 phosphatidylglycerophosphatase activity K01095 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008962,GO:0009058,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016021,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0030258,GO:0031224,GO:0031226,GO:0032026,GO:0042221,GO:0042577,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0046839,GO:0050896,GO:0071704,GO:0071944,GO:0090407,GO:1901576 3.1.3.27 0.0000000000000000000000000000006932 129.0
YYD3_k127_1073412_0 GxGYxYP putative glycoside hydrolase C-terminal domain K03088 - - 2.66e-284 888.0
YYD3_k127_1073412_1 Glycosyl Hydrolase Family 88 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 520.0
YYD3_k127_1073412_2 amine dehydrogenase activity K21449 - - 0.000000000000000000000000000000000001602 147.0
YYD3_k127_1075137_0 PFAM glycosyl transferase family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 1.381e-257 811.0
YYD3_k127_1088900_0 fibronectin type III domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 494.0
YYD3_k127_1088900_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 399.0
YYD3_k127_1088900_2 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 353.0
YYD3_k127_1088900_3 - - - - 0.000000000000000000000000000000000000000000000000000003955 206.0
YYD3_k127_1099697_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K03737 GO:0003674,GO:0003824,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016491,GO:0016625,GO:0016903,GO:0043873,GO:0050896,GO:0055114 1.2.7.1 0.0 1742.0
YYD3_k127_1099697_1 dihydroorotate dehydrogenase activity K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004999 452.0
YYD3_k127_1099697_2 peptide catabolic process K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 468.0
YYD3_k127_1099697_3 TIGRFAM oligoendopeptidase, M3 family K08602 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 436.0
YYD3_k127_1099697_4 GGDEF domain K03413 - - 0.00000000000000000000000000000000000000000000000000028 199.0
YYD3_k127_1099697_5 cellulase activity K01186,K01197,K05988,K11931,K21449 - 3.2.1.11,3.2.1.18,3.2.1.35 0.000000000000000000000000000001348 140.0
YYD3_k127_1099697_6 CoA binding domain - - - 0.00000000000000000000000003832 113.0
YYD3_k127_1099697_7 nitrogen fixation - - - 0.0001198 51.0
YYD3_k127_1125627_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 2.321e-235 746.0
YYD3_k127_1137321_0 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000003874 146.0
YYD3_k127_1137321_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA - - - 0.0000000000107 69.0
YYD3_k127_1137321_2 Transglutaminase/protease-like homologues - - - 0.0002345 49.0
YYD3_k127_1147113_0 cellulose binding - - - 0.00000000000000000000000000000000000000000000001672 183.0
YYD3_k127_1147113_1 DNA polymerase X family K02347 - - 0.00000000000000000000000000000000000000000721 160.0
YYD3_k127_1147113_2 YCII-related domain - - - 0.000000000000000000000000002974 113.0
YYD3_k127_1149009_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 293.0
YYD3_k127_1149009_1 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000003827 195.0
YYD3_k127_1149009_2 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016787,GO:0016788,GO:0040007,GO:0044464,GO:0052689,GO:0071944,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000003533 181.0
YYD3_k127_115309_0 cystathionine gamma-synthase activity K01758,K01760,K01761 - 4.4.1.1,4.4.1.11,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 468.0
YYD3_k127_115309_1 Nitroreductase - - - 0.000000000000000000000000000000000000005305 154.0
YYD3_k127_116112_0 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 394.0
YYD3_k127_116112_1 aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008099 391.0
YYD3_k127_116112_2 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003089 282.0
YYD3_k127_116112_3 ribosomal small subunit biogenesis K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000006497 104.0
YYD3_k127_116112_4 PFAM thioesterase superfamily K07107 - - 0.000000000007587 74.0
YYD3_k127_1165240_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000001378 184.0
YYD3_k127_1165240_1 Glycosyl transferase, family 2 K07011 - - 0.000000000000000000000000000000000008969 144.0
YYD3_k127_1174352_0 Acetoacetate decarboxylase (ADC) K01574 - 4.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006895 337.0
YYD3_k127_1174352_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005093 277.0
YYD3_k127_1174352_2 - - - - 0.00000000000000000000000000000000000000007432 160.0
YYD3_k127_1174352_3 conserved protein (DUF2088) - - - 0.000000000000000002533 86.0
YYD3_k127_1174352_4 short-chain dehydrogenase K07535 - - 0.0000000000000256 74.0
YYD3_k127_1194568_0 NAD(P)H-binding K01784,K02473 - 5.1.3.2,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007992 384.0
YYD3_k127_1194568_1 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 365.0
YYD3_k127_1194568_2 4'-phosphopantetheinyl transferase superfamily K00997,K06133 - 2.7.8.7 0.00000000000000000000000000000000000000000000000006691 188.0
YYD3_k127_1194568_3 aldo keto reductase - - - 0.000000000000005482 74.0
YYD3_k127_1206127_0 TonB-dependent receptor - - - 7.654e-255 802.0
YYD3_k127_1206127_1 - - - - 0.000000000000000000000000000000000000000000000001018 192.0
YYD3_k127_121135_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 423.0
YYD3_k127_121135_1 transporter antisigma-factor antagonist STAS K03321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 332.0
YYD3_k127_121135_2 oxidoreductase - - - 0.000000000000000000000000000000000000000000000002511 183.0
YYD3_k127_121135_3 Phosphoglycerate mutase family - - - 0.000000000000000001352 92.0
YYD3_k127_121135_4 exo-alpha-(2->6)-sialidase activity K01186 - 3.2.1.18 0.000000003931 68.0
YYD3_k127_121135_5 Oxidoreductase K14273 - 1.1.1.179 0.0008146 43.0
YYD3_k127_1211743_0 Glycosyl transferase WecB/TagA/CpsF family K05946 - 2.4.1.187 0.000000000000000000000000000000000000000000000000000000000000000003985 233.0
YYD3_k127_1211743_1 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000007844 203.0
YYD3_k127_1211743_2 bacterial-type flagellum-dependent cell motility - - - 0.00000000000000000000000000000000001747 153.0
YYD3_k127_1211743_3 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000008291 124.0
YYD3_k127_1211743_4 PFAM glycosyl transferase family 2 K07011 - - 0.000000000000005817 80.0
YYD3_k127_1219796_0 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 1.42e-198 625.0
YYD3_k127_1219796_1 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 570.0
YYD3_k127_1222053_0 TIGRFAM amino acid carrier protein K03310 - - 1.11e-197 626.0
YYD3_k127_1222053_1 Belongs to the HpcH HpaI aldolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 574.0
YYD3_k127_1222053_2 COG2755 Lysophospholipase L1 and related - - - 0.000000000000000000000000000000000000000000000000000000000000000004195 234.0
YYD3_k127_1222053_3 Predicted membrane protein (DUF2157) - - - 0.000000000000000000000000000000001684 135.0
YYD3_k127_123609_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000001329 269.0
YYD3_k127_123609_1 aminopeptidase N - - - 0.0000000000000000000000000003763 130.0
YYD3_k127_1246612_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K00486 GO:0003674,GO:0003824,GO:0004497,GO:0008150,GO:0008152,GO:0009058,GO:0016491,GO:0019748,GO:0044550,GO:0055114 1.14.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 549.0
YYD3_k127_1246612_1 galactose-1-phosphate K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005418 469.0
YYD3_k127_1246612_2 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000288 283.0
YYD3_k127_1246612_3 Protein conserved in bacteria - - - 0.000000000000000000000000000009509 126.0
YYD3_k127_1246612_4 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.0000000000000000000000155 101.0
YYD3_k127_1264387_0 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002513 243.0
YYD3_k127_1264387_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000003779 240.0
YYD3_k127_1264387_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000001832 240.0
YYD3_k127_1264387_3 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000001476 231.0
YYD3_k127_1264387_4 Protein of unknown function (DUF1207) - - - 0.0000000000000000000000000000000000006187 151.0
YYD3_k127_1264812_0 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 570.0
YYD3_k127_1264812_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000001484 159.0
YYD3_k127_1264812_2 Domain of unknown function (DUF1330) - - - 0.000000000000000000000000000000819 123.0
YYD3_k127_1264812_3 Putative zinc ribbon domain - - - 0.0000000000000000003577 91.0
YYD3_k127_1264812_4 PFAM glycosyl transferase family 9 - - - 0.0000000000000000005945 95.0
YYD3_k127_1264812_5 Calcineurin-like phosphoesterase - - - 0.0004591 45.0
YYD3_k127_1280225_0 C-terminal binding-module, SLH-like, of glucodextranase K01178,K01200 - 3.2.1.3,3.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004003 571.0
YYD3_k127_1280225_1 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 332.0
YYD3_k127_1280225_2 heme oxygenase (decyclizing) activity - - - 0.000000000000000000000000000000000000000001451 159.0
YYD3_k127_1297295_0 carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 433.0
YYD3_k127_1297295_1 TIGRFAM YihY family protein (not ribonuclease BN) K07058 - - 0.000002715 56.0
YYD3_k127_1316481_0 Amidohydrolase family K06015 - 3.5.1.81 6.465e-249 780.0
YYD3_k127_1316481_1 Integral membrane protein TerC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 339.0
YYD3_k127_1316481_2 Beta-lactamase - - - 0.0000000000000000000000000000000000000005134 159.0
YYD3_k127_1316481_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient - - - 0.00000000000000000000003122 103.0
YYD3_k127_1332254_0 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001735 278.0
YYD3_k127_1332254_1 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811 - - 0.00000000000000000000000000000000000000000000000000000000000001932 223.0
YYD3_k127_1332254_2 transferase activity, transferring alkyl or aryl (other than methyl) groups K00806,K14215,K21273 GO:0000287,GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008834,GO:0009058,GO:0009987,GO:0016020,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0030145,GO:0033850,GO:0040007,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0046872,GO:0046914,GO:0050347,GO:0071704,GO:0071944,GO:1901576,GO:1901615,GO:1901617 2.5.1.31,2.5.1.86,2.5.1.88 0.00000000000000000000000000000000000000000000000000000000001039 213.0
YYD3_k127_1332254_3 - - - - 0.0000000000000000000000000000000000000000000000007068 179.0
YYD3_k127_1332254_4 - - - - 0.00000000000000000000000000000000015 141.0
YYD3_k127_1332254_5 YbaB/EbfC DNA-binding family K09747 - - 0.000000000000000000000000000001144 124.0
YYD3_k127_1340402_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K15372 - 2.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 473.0
YYD3_k127_1340402_1 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 474.0
YYD3_k127_1340402_2 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 321.0
YYD3_k127_1346335_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009966,GO:0009967,GO:0009986,GO:0009987,GO:0010646,GO:0010647,GO:0016465,GO:0018995,GO:0020003,GO:0023051,GO:0023056,GO:0030430,GO:0032991,GO:0033643,GO:0033646,GO:0033655,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0043900,GO:0043903,GO:0044183,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0051082,GO:0061077,GO:0065007,GO:0065010,GO:0101031,GO:1901222,GO:1901224,GO:1902531,GO:1902533,GO:1990220,GO:2000535 - 1.656e-247 774.0
YYD3_k127_1346335_1 PFAM Alpha amylase, catalytic - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 439.0
YYD3_k127_1346335_2 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 - 0.0000000000000000000000000000000000000000007682 159.0
YYD3_k127_1346335_3 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000004836 117.0
YYD3_k127_1348600_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972,K10754 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 522.0
YYD3_k127_1348600_1 sequence-specific DNA binding - - - 0.00000000000000000000001015 111.0
YYD3_k127_1348600_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000003471 103.0
YYD3_k127_1354690_0 DNA replication proofreading K02336,K06877 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 466.0
YYD3_k127_1354690_1 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000004257 127.0
YYD3_k127_1354690_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage - - - 0.000000000009776 71.0
YYD3_k127_1354690_3 - - - - 0.0000000000103 69.0
YYD3_k127_1354690_4 PD-(D/E)XK nuclease superfamily - - - 0.000000007407 57.0
YYD3_k127_1354690_5 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.0000006868 51.0
YYD3_k127_1358210_0 phosphopyruvate hydratase activity K01689 GO:0001968,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005518,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030312,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035375,GO:0042866,GO:0043236,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0044877,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050840,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 4.2.1.11 4.015e-206 649.0
YYD3_k127_1358210_1 phosphoglucomutase phosphomannomutase alpha beta alpha domain I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 320.0
YYD3_k127_1358210_2 chaperone-mediated protein folding - - - 0.00000000000000000000000000000000000000000000000000000001314 223.0
YYD3_k127_1358210_3 Glycosyl transferase, family 9 K02841,K02843,K02847,K02849,K21003 - - 0.0000000000000000000000000000000000000000000000000000001773 207.0
YYD3_k127_1362504_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03694,K03695 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0010033,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030312,GO:0030554,GO:0031249,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0035966,GO:0036094,GO:0040007,GO:0042221,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 - 1.238e-299 933.0
YYD3_k127_1362504_1 unfolded protein binding K04043 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0018995,GO:0019219,GO:0019222,GO:0020003,GO:0022607,GO:0030430,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0033643,GO:0033646,GO:0033655,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043230,GO:0043531,GO:0043656,GO:0043657,GO:0043933,GO:0044085,GO:0044183,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0065010,GO:0070887,GO:0071310,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 1.082e-267 833.0
YYD3_k127_1374031_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1100.0
YYD3_k127_1374031_1 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000002354 168.0
YYD3_k127_1374031_2 DNA-templated transcription, initiation - - - 0.0000000000000000000000000000000000002906 155.0
YYD3_k127_1374031_3 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.00000000000000000000000001042 114.0
YYD3_k127_1374031_4 cytochrome complex assembly - - - 0.00000000000000000000000007768 112.0
YYD3_k127_1374031_5 Protein of unknown function (DUF1761) - - - 0.0000000000000000005586 92.0
YYD3_k127_1374031_6 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000002489 71.0
YYD3_k127_1374031_7 Protein of unknown function (DUF2892) - - - 0.0000000000002741 71.0
YYD3_k127_1374031_8 - - - - 0.0000000000004942 73.0
YYD3_k127_1374031_9 Cysteine-rich CPXCG - - - 0.0000000000204 67.0
YYD3_k127_1381380_0 phosphorelay signal transduction system K02481,K07713,K07714 - - 1.246e-222 700.0
YYD3_k127_1381380_1 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006833 414.0
YYD3_k127_1381380_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 401.0
YYD3_k127_1381380_3 Ergosterol biosynthesis ERG4/ERG24 family - - - 0.00000000000000000000000000000000000000000000000000003898 192.0
YYD3_k127_1381380_4 metallopeptidase activity K06974 - - 0.0000000000000000000000000000000000000000000000003762 181.0
YYD3_k127_1381380_5 Domain of unknown function (DUF1330) - - - 0.00000000000000000000000001413 113.0
YYD3_k127_1381380_6 metallopeptidase activity K01179,K01181 - 3.2.1.4,3.2.1.8 0.000000000000000000001618 103.0
YYD3_k127_1381380_7 Cupin domain - - - 0.0004566 43.0
YYD3_k127_1381380_8 Domain of unknown function (DUF1330) - - - 0.0009065 44.0
YYD3_k127_1399393_0 DNA polymerase Ligase (LigD) - - - 7.806e-321 999.0
YYD3_k127_1399393_1 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000005867 161.0
YYD3_k127_1399393_2 DinB family - - - 0.0000000000000000000000001976 109.0
YYD3_k127_140964_0 amine dehydrogenase activity - - - 1.912e-222 723.0
YYD3_k127_140964_1 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 375.0
YYD3_k127_140964_10 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like - - - 0.00000000000004254 78.0
YYD3_k127_140964_12 antisigma factor binding K04749 - - 0.000000002678 61.0
YYD3_k127_140964_2 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 372.0
YYD3_k127_140964_3 phosphoserine phosphatase activity K01768,K07315 - 3.1.3.3,4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 363.0
YYD3_k127_140964_4 Hypothetical methyltransferase K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000005561 226.0
YYD3_k127_140964_5 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008794,GO:0016491,GO:0030611,GO:0030613,GO:0030614,GO:0042221,GO:0046685,GO:0050896,GO:0055114 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000005376 207.0
YYD3_k127_140964_6 Protease prsW family - - - 0.0000000000000000000000000000000000000001222 163.0
YYD3_k127_140964_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000002978 109.0
YYD3_k127_140964_8 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.000000000000000000000003423 109.0
YYD3_k127_140964_9 - - - - 0.0000000000000000000003547 102.0
YYD3_k127_142304_0 TonB-dependent receptor - - - 2.667e-307 972.0
YYD3_k127_142304_1 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K17763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007135 439.0
YYD3_k127_142304_2 protein secretion K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 418.0
YYD3_k127_142304_3 helix_turn_helix, Lux Regulon K11618 - - 0.000000000000000000000000000000000000000000000000000000000000001788 225.0
YYD3_k127_142304_4 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000002631 228.0
YYD3_k127_142304_5 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000000000000006685 179.0
YYD3_k127_142304_6 response regulator K07782 - - 0.0000000000000000000000000000000000000000000008968 174.0
YYD3_k127_142304_7 Histidine kinase-like ATPase domain - - - 0.0000000000000000000000000000000000000000001578 163.0
YYD3_k127_142304_8 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K17762 - - 0.00000000000000000000000000000000000000001653 156.0
YYD3_k127_142304_9 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.00004708 49.0
YYD3_k127_1428050_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0 1092.0
YYD3_k127_1428050_1 translation elongation factor activity K02358,K15771 GO:0001666,GO:0001817,GO:0001819,GO:0002791,GO:0002793,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0006950,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009274,GO:0009275,GO:0009628,GO:0009986,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0010339,GO:0010467,GO:0016020,GO:0019538,GO:0019899,GO:0022610,GO:0030312,GO:0032677,GO:0032757,GO:0032879,GO:0032880,GO:0034641,GO:0034645,GO:0035375,GO:0035821,GO:0036293,GO:0040007,GO:0042221,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044003,GO:0044068,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044403,GO:0044406,GO:0044419,GO:0044424,GO:0044426,GO:0044444,GO:0044462,GO:0044464,GO:0044650,GO:0044651,GO:0048518,GO:0048522,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051701,GO:0051704,GO:0051817,GO:0065007,GO:0070201,GO:0070482,GO:0071704,GO:0071944,GO:0090087,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903530,GO:1903532,GO:1904951,GO:2000482,GO:2000484 - 1.934e-222 694.0
YYD3_k127_1428050_10 rRNA binding K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000004479 107.0
YYD3_k127_1428050_2 rRNA binding K02886 GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 411.0
YYD3_k127_1428050_3 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001129 271.0
YYD3_k127_1428050_4 Forms part of the polypeptide exit tunnel K02926,K16193 GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003700,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008428,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030234,GO:0030312,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032069,GO:0032074,GO:0032268,GO:0032269,GO:0032991,GO:0032993,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042788,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0065003,GO:0065007,GO:0065009,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:0098772,GO:0140110,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000007271 245.0
YYD3_k127_1428050_5 cytoplasmic translation K02946 GO:0001072,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0015935,GO:0019219,GO:0019222,GO:0019538,GO:0022626,GO:0022627,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0140110,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000002103 174.0
YYD3_k127_1428050_6 rRNA binding K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016020,GO:0016043,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000000636 173.0
YYD3_k127_1428050_7 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042788,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000006124 157.0
YYD3_k127_1428050_8 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000487 147.0
YYD3_k127_1428050_9 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0000028,GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000008712 140.0
YYD3_k127_1442032_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005465 375.0
YYD3_k127_1442032_1 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000001574 126.0
YYD3_k127_1442032_2 shikimate dehydrogenase K13832 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004764,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046417,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0055114,GO:0061458,GO:0071704,GO:1901576,GO:1901615 1.1.1.25,4.2.1.10 0.000000000000000004005 86.0
YYD3_k127_1447374_0 Zinc metalloprotease (Elastase) K20274 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004642 431.0
YYD3_k127_1447374_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 346.0
YYD3_k127_1447374_2 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000006984 244.0
YYD3_k127_1447374_3 Belongs to the peptidase S8 family - - - 0.000000000000000218 88.0
YYD3_k127_1450237_0 lyase activity K11645 GO:0003674,GO:0003824,GO:0004332,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016829,GO:0016830,GO:0016832,GO:0042802,GO:0044424,GO:0044444,GO:0044464 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 587.0
YYD3_k127_1450237_1 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 440.0
YYD3_k127_1450237_2 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000008064 229.0
YYD3_k127_1450237_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000000000000126 156.0
YYD3_k127_1461093_0 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and K03182 - 4.1.1.98 2.38e-208 658.0
YYD3_k127_1461093_1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K01612,K03182,K16874 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044464 4.1.1.61,4.1.1.98 0.000000000000000000000000000000005931 138.0
YYD3_k127_1461093_2 Protein of unknown function (DUF454) K09790 - - 0.000000000000000000002928 98.0
YYD3_k127_1461093_3 - - - - 0.00000000001364 68.0
YYD3_k127_1463645_0 Bacterial extracellular solute-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 487.0
YYD3_k127_1463645_1 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 295.0
YYD3_k127_1463645_2 binding-protein-dependent transport systems inner membrane component K02025,K10241,K15771 - - 0.0000000000000000000000000000000000000000004203 162.0
YYD3_k127_1471675_0 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.00000000000000000000000000000000000000000001528 178.0
YYD3_k127_1471675_1 PFAM glycosyl transferase family 9 - - - 0.00000000000000000000000000000232 126.0
YYD3_k127_1471675_2 Glycosyltransferase family 87 - - - 0.000000000000000000000000002582 128.0
YYD3_k127_1471675_3 Polysaccharide biosynthesis protein - - - 0.00008369 49.0
YYD3_k127_1472093_0 Pyridoxal-dependent decarboxylase conserved domain - - - 2.731e-197 632.0
YYD3_k127_1472093_1 Y_Y_Y domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004797 490.0
YYD3_k127_1472093_2 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 426.0
YYD3_k127_1472093_3 Isoprenylcysteine carboxyl methyltransferase (ICMT) family K21310 - 2.1.1.334 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005447 349.0
YYD3_k127_1472093_4 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000003059 192.0
YYD3_k127_1472093_5 ADP-glyceromanno-heptose 6-epimerase activity K01784 - 5.1.3.2 0.0000000000000000000000000000000008355 133.0
YYD3_k127_1472093_6 of the beta-lactamase superfamily I - - - 0.00000000004435 67.0
YYD3_k127_1472093_7 TIGRFAM TonB family protein K03832 - - 0.00000003614 64.0
YYD3_k127_1493288_0 alkaline phosphatase activity K01077 - 3.1.3.1 0.0000000000001077 73.0
YYD3_k127_1493288_1 PFAM phosphate transporter K03306 - - 0.00000000001435 66.0
YYD3_k127_1493288_2 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.000000003651 59.0
YYD3_k127_1493288_3 Alkaline phosphatase K01077 - 3.1.3.1 0.000001078 52.0
YYD3_k127_152163_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 3.17e-293 935.0
YYD3_k127_152163_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 3.027e-200 641.0
YYD3_k127_152163_10 MraZ protein, putative antitoxin-like K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.00000000000000000000000000000000000000000005811 164.0
YYD3_k127_152163_11 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.000000000000000000000000000000000004531 146.0
YYD3_k127_152163_2 PFAM penicillin-binding protein transpeptidase K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 481.0
YYD3_k127_152163_3 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928,K15792 - 6.3.2.10,6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 447.0
YYD3_k127_152163_4 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006396 400.0
YYD3_k127_152163_5 GTPase activity K03650 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 389.0
YYD3_k127_152163_6 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003242 332.0
YYD3_k127_152163_7 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000007035 261.0
YYD3_k127_152163_8 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C K06137 - 1.3.3.11 0.0000000000000000000000000000000000000000000000000000000000000004861 229.0
YYD3_k127_152163_9 membrane insertase activity K03217 GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0031224,GO:0031226,GO:0032940,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051205,GO:0051234,GO:0051259,GO:0051260,GO:0051641,GO:0061024,GO:0065003,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 0.00000000000000000000000000000000000000000000001918 174.0
YYD3_k127_1532081_0 PFAM beta-lactamase domain protein K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 331.0
YYD3_k127_1532081_1 Cupin domain K11312 - - 0.000000000000000000000000000000555 124.0
YYD3_k127_1532081_2 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.000000000000000000006307 92.0
YYD3_k127_1562563_0 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008264 301.0
YYD3_k127_1562563_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K20444 - - 0.00000000000000000004642 93.0
YYD3_k127_1565660_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 GO:0003674,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901362,GO:1901576 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000731 346.0
YYD3_k127_1565660_1 Major facilitator superfamily - - - 0.000000000000000000000009697 106.0
YYD3_k127_1565660_2 Belongs to the GARS family K01945,K13713 - 6.3.2.6,6.3.4.13 0.0000001382 55.0
YYD3_k127_1568854_0 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000004667 206.0
YYD3_k127_1568854_1 Histidine kinase K02480,K07683 - 2.7.13.3 0.0000000000000000000000000003351 118.0
YYD3_k127_1568854_2 response regulator K02282 - - 0.0000000000000000000000000007772 117.0
YYD3_k127_1568854_3 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000003782 123.0
YYD3_k127_1568854_4 Integrin alpha (beta-propellor repeats). - - - 0.00000000005735 76.0
YYD3_k127_1584368_0 DNA polymerase type-B family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006187 447.0
YYD3_k127_1584368_1 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000129 254.0
YYD3_k127_1584368_2 cobalamin binding K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000004062 213.0
YYD3_k127_1584368_3 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000001466 186.0
YYD3_k127_1584368_4 Cold shock protein K03704 - - 0.0000000000000000000000000858 108.0
YYD3_k127_1584368_5 amine dehydrogenase activity - - - 0.00000000000000000000006913 106.0
YYD3_k127_1584368_6 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.0000000000000000000001225 106.0
YYD3_k127_1584368_7 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000009836 61.0
YYD3_k127_1584368_8 - - - - 0.000004605 53.0
YYD3_k127_1586511_0 membrane organization K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 415.0
YYD3_k127_1586511_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000006438 226.0
YYD3_k127_1586511_2 Carbon starvation protein K06200 - - 0.00000000000000000000000000215 115.0
YYD3_k127_1586511_3 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000001335 111.0
YYD3_k127_158820_0 membrane organization K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 621.0
YYD3_k127_158820_1 Belongs to the peptidase S8 family - - - 0.00000000001231 77.0
YYD3_k127_1597198_0 iron-nicotianamine transmembrane transporter activity - GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0008150,GO:0016020,GO:0022857,GO:0051179,GO:0051234,GO:0055085 - 1.659e-299 932.0
YYD3_k127_1597198_1 proline dehydrogenase activity K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 309.0
YYD3_k127_1597198_2 Nucleoside recognition K06373,K06374 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002099 276.0
YYD3_k127_1597198_3 Nucleoside recognition K06373,K06374 - - 0.0000000000000000000000000000000000000000000000000000000000000001642 225.0
YYD3_k127_1600125_0 glucosamine-6-phosphate deaminase activity K01057,K02564 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 3.1.1.31,3.5.99.6 4.324e-290 910.0
YYD3_k127_1600125_1 Involved in the tonB-independent uptake of proteins K03641 - - 0.000000000000007863 85.0
YYD3_k127_1600125_2 LVIVD repeat K01179 - 3.2.1.4 0.00000000001052 66.0
YYD3_k127_1605488_0 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000001524 244.0
YYD3_k127_1605488_1 - - - - 0.0000000000000000000000000000000000000000000000002407 199.0
YYD3_k127_1605488_2 MarC family integral membrane protein - - - 0.0000000000000000000000000000000000000000000000002473 182.0
YYD3_k127_1605488_3 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000004244 173.0
YYD3_k127_1605488_4 Pathogenicity locus - - - 0.000000000000000000000000001839 115.0
YYD3_k127_1605488_5 protein secretion - - - 0.000000000000000000000000005552 115.0
YYD3_k127_1605488_6 DNA-binding helix-turn-helix protein K01356 - 3.4.21.88 0.000000000000000000002581 107.0
YYD3_k127_1605488_7 Transposase - - - 0.0000029 56.0
YYD3_k127_1611622_0 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654,K10966 - 3.4.23.43 0.00000000000000000000000000000000000000002823 162.0
YYD3_k127_1611622_1 Prokaryotic N-terminal methylation motif K02655 - - 0.000000000000000000000000000000000009117 141.0
YYD3_k127_1611622_2 RHS repeat-associated core domain - - - 0.0000000000000000000000000000008791 133.0
YYD3_k127_16194_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000522 306.0
YYD3_k127_16194_1 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000000000000000000000000000000000001749 171.0
YYD3_k127_16194_2 Histidine kinase - - - 0.000000000000000003467 93.0
YYD3_k127_1620850_0 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 329.0
YYD3_k127_1620850_1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000000001321 221.0
YYD3_k127_1620850_2 Catalyzes the conversion of pppGpp to ppGpp. Guanosine pentaphosphate (pppGpp) is a cytoplasmic signaling molecule which together with ppGpp controls the stringent response , an adaptive process that allows bacteria to respond to amino acid starvation, resulting in the coordinated regulation of numerous cellular activities K01524 GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006082,GO:0006139,GO:0006725,GO:0006793,GO:0006797,GO:0006798,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008894,GO:0009056,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0015949,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034641,GO:0042594,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:1901360,GO:1901575 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000003548 217.0
YYD3_k127_1620850_3 dehydrogenase subunit - - - 0.0000001174 62.0
YYD3_k127_1626050_0 bacterial-type flagellum-dependent cell motility - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 465.0
YYD3_k127_1627762_0 Aminotransferase class I and II K14260 - 2.6.1.2,2.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 518.0
YYD3_k127_1627762_1 Belongs to the peptidase M16 family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009317 381.0
YYD3_k127_1627762_2 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000004168 246.0
YYD3_k127_1627762_3 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 0.0000000000000000000000000000000000000000000000005143 188.0
YYD3_k127_1642221_0 iron-sulfur cluster assembly K07033,K09014 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0008150,GO:0008152,GO:0009536,GO:0009842,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0071840 - 1.527e-264 819.0
YYD3_k127_1642221_1 ATPase activity K09013 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0071840 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 348.0
YYD3_k127_1642221_2 cysteine desulfurase activity K04487 GO:0000096,GO:0000959,GO:0000963,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006396,GO:0006399,GO:0006400,GO:0006464,GO:0006520,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016226,GO:0016740,GO:0016782,GO:0016783,GO:0018130,GO:0018282,GO:0018283,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0022607,GO:0031071,GO:0031163,GO:0031974,GO:0031981,GO:0032324,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0036211,GO:0042278,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043545,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0046983,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0065003,GO:0070013,GO:0070525,GO:0070900,GO:0070903,GO:0071704,GO:0071840,GO:0072521,GO:0090304,GO:0090407,GO:0090646,GO:0140053,GO:1900864,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1990221 2.8.1.7 0.0000000000000000577 82.0
YYD3_k127_1642221_4 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.0007783 46.0
YYD3_k127_1658439_0 peptidase S9 prolyl oligopeptidase active site domain protein - - - 1.551e-251 805.0
YYD3_k127_1658439_1 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03772,K03773 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000005276 249.0
YYD3_k127_1658439_2 PAP2 superfamily C-terminal - - - 0.0000000000000000883 85.0
YYD3_k127_1666815_0 - - - - 0.000000000000000000000000000000593 140.0
YYD3_k127_1666815_1 - - - - 0.000000000000000000000000002072 125.0
YYD3_k127_1675356_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005133 476.0
YYD3_k127_1675356_1 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 401.0
YYD3_k127_1675356_2 long-chain fatty acid transporting porin activity - - - 0.000000000000000000001903 101.0
YYD3_k127_1679897_0 GHKL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001072 282.0
YYD3_k127_1679897_1 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002254 270.0
YYD3_k127_1679897_2 Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.00003853 52.0
YYD3_k127_168723_0 Involved in the tonB-independent uptake of proteins K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 432.0
YYD3_k127_168723_1 peptidase activity, acting on L-amino acid peptides - - - 0.0000000000000000000000000000000000000004534 164.0
YYD3_k127_1695977_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 GO:0003674,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901362,GO:1901576 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004944 494.0
YYD3_k127_1695977_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005694 349.0
YYD3_k127_1695977_2 Belongs to the universal ribosomal protein uS2 family K02967 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004906 329.0
YYD3_k127_1695977_3 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0001871,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005085,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0019538,GO:0019899,GO:0030246,GO:0030247,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051020,GO:0065007,GO:0065009,GO:0071704,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009499 272.0
YYD3_k127_1695977_4 cytoplasmic translational termination K02838 GO:0002181,GO:0002184,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0030312,GO:0032984,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000007992 229.0
YYD3_k127_1695977_5 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000006161 160.0
YYD3_k127_1695977_6 PspC domain - - - 0.0000000000000000000000000000000000000000007028 165.0
YYD3_k127_174273_0 pyrroloquinoline quinone binding K00117 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004872 425.0
YYD3_k127_174273_1 calcium- and calmodulin-responsive adenylate cyclase activity K01190,K01406,K07004,K13277 - 3.2.1.23,3.4.24.40 0.000000005777 59.0
YYD3_k127_1749760_0 - - - - 0.000000000000000000000000000000001004 139.0
YYD3_k127_1749760_1 - - - - 0.00000000000001044 81.0
YYD3_k127_1756500_0 UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity K00790 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008760,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016765,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 534.0
YYD3_k127_1756500_1 Deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002958 244.0
YYD3_k127_1756500_2 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000000000000000000000000000001007 225.0
YYD3_k127_1756500_3 Fumarylacetoacetate (FAA) hydrolase K01555 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000001622 202.0
YYD3_k127_1756500_4 oligosaccharyl transferase activity - - - 0.00000006609 57.0
YYD3_k127_1756500_5 oligosaccharyl transferase activity - - - 0.00001763 53.0
YYD3_k127_1781622_0 Protein of unknown function, DUF255 K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 473.0
YYD3_k127_1781622_1 Protein of unknown function, DUF255 K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 294.0
YYD3_k127_1781622_2 COGs COG1392 Phosphate transport regulator (distant homolog of PhoU) K07220 - - 0.00000000000000000000000000000000000000000005643 166.0
YYD3_k127_1781622_3 3-demethylubiquinone-9 3-O-methyltransferase activity K03428 - 2.1.1.11 0.0000000000000000000000000001811 123.0
YYD3_k127_1781622_4 PFAM Class I peptide chain release factor K15034 - - 0.0000000000000000000000000004881 119.0
YYD3_k127_1781622_5 PFAM Nickel cobalt transporter, high-affinity - - - 0.000000000000000000003318 100.0
YYD3_k127_1786986_0 SMART PUA domain containing protein K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000001291 218.0
YYD3_k127_1786986_1 - K07275 - - 0.000000000000000000000000000000000000000000000000001582 196.0
YYD3_k127_1794907_0 Gaf domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 451.0
YYD3_k127_1794907_1 long-chain fatty acid transporting porin activity K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002371 292.0
YYD3_k127_1801673_0 Y_Y_Y domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000111 261.0
YYD3_k127_1801673_1 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000001859 175.0
YYD3_k127_1801673_2 amine dehydrogenase activity - - - 0.0000000000000000000000000000000006867 147.0
YYD3_k127_1821838_0 Histidine kinase K02480,K07683 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001239 282.0
YYD3_k127_1821838_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000001386 211.0
YYD3_k127_1838296_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001801 287.0
YYD3_k127_1838296_1 Sh3 type 3 domain protein K01448,K07448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000001145 223.0
YYD3_k127_1839030_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 1.627e-217 711.0
YYD3_k127_1839030_1 PFAM Stage II sporulation - - - 0.00000000000000000000000000000000000000000000000677 198.0
YYD3_k127_1839030_2 sigma factor antagonist activity K04757,K07315 - 2.7.11.1,3.1.3.3 0.00000000000000000000000000000000001974 140.0
YYD3_k127_1839030_3 antisigma factor binding K04749 - - 0.000000000000000000000000000000002358 132.0
YYD3_k127_1859176_0 Tryptophanyl-tRNA synthetase K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 478.0
YYD3_k127_1859176_1 PFAM HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000006466 228.0
YYD3_k127_1879318_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.000000000000000000000000000000000000000000007565 164.0
YYD3_k127_1879546_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 431.0
YYD3_k127_1879546_1 membrane organization K03641,K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005041 373.0
YYD3_k127_1879546_2 PHP domain protein K01624,K07053 - 3.1.3.97,4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 321.0
YYD3_k127_1879546_3 cyclic nucleotide binding K01420,K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001344 267.0
YYD3_k127_1879546_4 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000111 204.0
YYD3_k127_1879546_5 COG1520 FOG WD40-like repeat - - - 0.0000000000000000000000000000000000000000631 169.0
YYD3_k127_1879546_6 metal-binding, possibly nucleic acid-binding protein K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000002095 115.0
YYD3_k127_1879546_7 Protein of unknown function (DUF3276) - - - 0.000000000000000000000001883 104.0
YYD3_k127_1879546_9 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0005016 42.0
YYD3_k127_1896556_0 ATPases associated with a variety of cellular activities K01990,K09689,K09691 - 3.6.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 372.0
YYD3_k127_1896556_1 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000008561 113.0
YYD3_k127_1902411_0 GxGYxYP putative glycoside hydrolase C-terminal domain K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 597.0
YYD3_k127_1902411_1 agmatine deiminase activity K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003496 385.0
YYD3_k127_1907100_0 Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 543.0
YYD3_k127_1907100_1 domain protein K02238 - - 0.00000000000000000000000000000000000000000000000000001473 199.0
YYD3_k127_1908089_0 serine-type endopeptidase activity K09973 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003968 330.0
YYD3_k127_1908089_1 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000001053 149.0
YYD3_k127_1918561_0 aspartate-tRNA(Asn) ligase activity K01876 GO:0003674,GO:0003824,GO:0004812,GO:0004815,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006422,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.12 4.737e-242 766.0
YYD3_k127_1918561_1 Belongs to the UPF0219 family K01641 - 2.3.3.10 0.0000000000000000000000000000693 120.0
YYD3_k127_1918561_2 PFAM Outer membrane efflux protein K15725 - - 0.0000000008907 63.0
YYD3_k127_1949869_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 375.0
YYD3_k127_1949869_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005714 361.0
YYD3_k127_1949869_2 Polysaccharide biosynthesis protein K15856 - 1.1.1.281 0.0000000000000000000000000000000000000000000000000000000000000000000000000002421 267.0
YYD3_k127_1949869_3 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002761 261.0
YYD3_k127_1949869_4 DinB family - - - 0.00000000000000000000000000000000000000000003336 169.0
YYD3_k127_1949869_5 cytokinin biosynthetic process K06966 - 3.2.2.10 0.000000000000000000000000000000000000003966 157.0
YYD3_k127_1949869_6 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000000003547 125.0
YYD3_k127_1949869_7 cobalamin-transporting ATPase activity K02014 - - 0.0000000000000006094 83.0
YYD3_k127_1954628_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 - 6.1.1.17,6.1.1.24 0.000000000000000000000000000000000000000000001158 169.0
YYD3_k127_1954628_1 cellulose binding - - - 0.0000000000003621 82.0
YYD3_k127_1961128_0 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 546.0
YYD3_k127_1961128_1 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 427.0
YYD3_k127_1961128_2 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000002194 168.0
YYD3_k127_1961128_3 4Fe-4S binding domain K00176 - 1.2.7.3 0.00000000000000000000000006747 108.0
YYD3_k127_1968508_0 Asparagine synthase K01953 - 6.3.5.4 2.42e-256 806.0
YYD3_k127_1968508_1 AMP-binding enzyme C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005264 483.0
YYD3_k127_1968508_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000004171 164.0
YYD3_k127_1968508_3 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.0000000000000000000000000000000000000002151 152.0
YYD3_k127_1968508_4 Acyl carrier protein - - - 0.000000000000000002139 87.0
YYD3_k127_1968615_0 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000764 343.0
YYD3_k127_1968615_1 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001113 284.0
YYD3_k127_1968615_2 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000003445 228.0
YYD3_k127_1968615_3 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000007332 173.0
YYD3_k127_1968615_4 Conserved hypothetical protein (DUF2461) - - - 0.00000000000000000000000000000000000000000004142 169.0
YYD3_k127_1968615_5 p-type atpase - - - 0.000003125 57.0
YYD3_k127_1970762_0 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 6.159e-237 746.0
YYD3_k127_1970762_1 Protein of unknown function (DUF1232) - - - 0.0001032 45.0
YYD3_k127_1972074_0 Pfam:KaiC K08482 - - 0.000000000000000000000000000000000000000000000000000000000000000006252 231.0
YYD3_k127_1972074_1 response regulator K07782 - - 0.000000000000000000000000000000000000000000004629 172.0
YYD3_k127_1972074_2 Polysaccharide biosynthesis protein - - - 0.000000000001191 69.0
YYD3_k127_1975904_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000006911 252.0
YYD3_k127_1975904_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000002374 238.0
YYD3_k127_1975904_2 hydroxyacid-oxoacid transhydrogenase activity K00048,K13954,K17067 GO:0003674,GO:0003824,GO:0004022,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006004,GO:0006066,GO:0008150,GO:0008152,GO:0008198,GO:0008912,GO:0009056,GO:0016052,GO:0016491,GO:0016614,GO:0016616,GO:0019299,GO:0019301,GO:0019317,GO:0019318,GO:0019320,GO:0019751,GO:0034311,GO:0034313,GO:0042354,GO:0042355,GO:0042844,GO:0042846,GO:0043167,GO:0043169,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046164,GO:0046174,GO:0046365,GO:0046872,GO:0046914,GO:0051143,GO:0055114,GO:0071704,GO:1901575,GO:1901615,GO:1901616 1.1.1.1,1.1.1.77,1.1.99.37,1.2.98.1 0.000000000000000000000000000000000004749 142.0
YYD3_k127_1975904_3 HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 - - 0.000000000000001885 81.0
YYD3_k127_1978687_0 aminopeptidase activity K19689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 356.0
YYD3_k127_1978687_1 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 334.0
YYD3_k127_1978687_2 Protein of unknown function (DUF971) - - - 0.00000000000000000000000001201 112.0
YYD3_k127_1978687_3 Zincin-like metallopeptidase K00930 - 2.7.2.8 0.000000000000000000000003949 109.0
YYD3_k127_1978687_6 Domain of unknown function (DUF4920) - - - 0.000000003583 63.0
YYD3_k127_1978687_7 Hemerythrin HHE cation binding domain K09155 - - 0.00000001377 63.0
YYD3_k127_1982561_0 cytochrome C peroxidase - - - 0.00000000000000000000000000000000000008935 162.0
YYD3_k127_1982561_1 peptidyl-tyrosine sulfation - - - 0.00000000002267 72.0
YYD3_k127_1989162_0 beta-lactamase activity K07126 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002001 295.0
YYD3_k127_1989162_1 Histidine kinase - - - 0.00000000000000002315 86.0
YYD3_k127_1989248_0 SMART PAS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003103 361.0
YYD3_k127_1989248_1 GHKL domain - - - 0.0000000000000000000000000000000000000000000000000000000000005227 214.0
YYD3_k127_1989248_2 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000697 213.0
YYD3_k127_1992383_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000003639 248.0
YYD3_k127_1992383_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000009651 202.0
YYD3_k127_1992383_2 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.00000000000000000000000000000000000000000000000000005575 192.0
YYD3_k127_1992383_3 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000746 165.0
YYD3_k127_1997482_0 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003704 355.0
YYD3_k127_1997482_1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074,K01782 - 1.1.1.157,1.1.1.35,4.2.1.17,5.1.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005587 327.0
YYD3_k127_1997482_2 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000527 274.0
YYD3_k127_1997482_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000006311 257.0
YYD3_k127_1997482_4 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000004359 181.0
YYD3_k127_1997482_5 Protein of unknown function (DUF1573) - - - 0.00000000000000000009448 100.0
YYD3_k127_2002337_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 407.0
YYD3_k127_2002337_1 Aminotransferase class I and II K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 312.0
YYD3_k127_2002337_2 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000000000000000000000000000000000000000001242 196.0
YYD3_k127_2002337_3 CDP-alcohol phosphatidyltransferase - - - 0.00000000000000000000009245 110.0
YYD3_k127_2002337_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.000000000000000002113 96.0
YYD3_k127_2002337_6 Tetratricopeptide TPR_2 repeat protein - - - 0.00003763 52.0
YYD3_k127_2004057_0 glucan 1,4-alpha-glucosidase activity K01178 - 3.2.1.3 1.035e-317 1005.0
YYD3_k127_2004057_1 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 523.0
YYD3_k127_2004057_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000001485 205.0
YYD3_k127_2004057_3 nucleotide catabolic process - - - 0.000000000000000000000004341 113.0
YYD3_k127_2004057_4 Belongs to the glycosyl hydrolase 2 family - - - 0.000002471 56.0
YYD3_k127_2042526_0 AcrB/AcrD/AcrF family K07787,K15726 - - 0.0 1126.0
YYD3_k127_2042526_1 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006005 464.0
YYD3_k127_2042526_2 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852,K00856 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004001,GO:0005488,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005975,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019200,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032552,GO:0032553,GO:0032554,GO:0032555,GO:0032559,GO:0032560,GO:0032561,GO:0032567,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046390,GO:0046483,GO:0046835,GO:0046872,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.15,2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 453.0
YYD3_k127_2042526_3 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 449.0
YYD3_k127_2042526_4 PFAM Endonuclease Exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004628 297.0
YYD3_k127_2042526_5 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000006045 262.0
YYD3_k127_2042526_6 Histidine kinase - - - 0.000000000000000005395 88.0
YYD3_k127_2042526_7 Cupredoxin-like domain - - - 0.0000000000002196 71.0
YYD3_k127_2046773_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004796 342.0
YYD3_k127_2046773_1 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 0.000000000000000000000000000007511 120.0
YYD3_k127_2056714_0 Non-ribosomal peptide synthetase modules and related - - - 1.71e-219 709.0
YYD3_k127_2056714_1 short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 575.0
YYD3_k127_2056714_2 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 386.0
YYD3_k127_2056714_3 kinase activity K02848 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009488 307.0
YYD3_k127_2056714_4 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000001344 243.0
YYD3_k127_2056714_5 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000041 222.0
YYD3_k127_2056714_6 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000001537 199.0
YYD3_k127_2056714_7 GTP-binding protein TypA K06207 - - 0.0000000000000000000000002442 107.0
YYD3_k127_2056714_8 PFAM response regulator receiver K02481,K07712 - - 0.00000000000000000000001542 106.0
YYD3_k127_2058700_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009154 468.0
YYD3_k127_2058700_1 Belongs to the ATCase OTCase family K00608,K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000682 442.0
YYD3_k127_2058700_2 cellulase activity K06882 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001458 275.0
YYD3_k127_2058700_3 uracil phosphoribosyltransferase activity K02825 GO:0003674,GO:0003700,GO:0003824,GO:0004845,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006220,GO:0006221,GO:0006355,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0031323,GO:0031326,GO:0034641,GO:0034654,GO:0043094,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044464,GO:0046390,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0055086,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0080090,GO:0090407,GO:0140110,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000005588 234.0
YYD3_k127_2058700_4 cellulase activity K06882 - - 0.0000000000000006475 88.0
YYD3_k127_2093351_0 7TM receptor with intracellular HD hydrolase K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 576.0
YYD3_k127_2093351_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007375 451.0
YYD3_k127_2093351_2 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 410.0
YYD3_k127_2093351_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 398.0
YYD3_k127_2093351_4 Belongs to the 'phage' integrase family K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 324.0
YYD3_k127_2093351_5 peroxiredoxin activity - - - 0.00000000000000000000000000000000000001586 151.0
YYD3_k127_2093351_6 - - - - 0.0000000000000000000000000000000000003943 156.0
YYD3_k127_2093351_7 Planctomycete cytochrome C - - - 0.000000000004507 72.0
YYD3_k127_2093351_8 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000002987 63.0
YYD3_k127_2096113_0 FMN binding K01823 GO:0003674,GO:0003824,GO:0004452,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016853,GO:0016860,GO:0016863,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0071704,GO:1901576 5.3.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007253 319.0
YYD3_k127_2096113_1 isoprenoid biosynthetic process K13787,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000001781 259.0
YYD3_k127_2096113_2 PTS HPr component phosphorylation site K11189 - - 0.000000000000000000003311 95.0
YYD3_k127_2096113_3 Nucleotidyl transferase K00973 - 2.7.7.24 0.00001512 48.0
YYD3_k127_2110025_0 DNA-directed DNA polymerase activity K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0 1188.0
YYD3_k127_2110025_1 Aldehyde dehydrogenase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008792 327.0
YYD3_k127_2110025_2 belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000001052 162.0
YYD3_k127_2119624_0 cellulose binding - - - 0.0000000000000000000000000000000000000007545 171.0
YYD3_k127_2119624_1 Photosynthesis system II assembly factor YCF48 - - - 0.00000000000000000000000009254 125.0
YYD3_k127_2119624_2 amine dehydrogenase activity - - - 0.000000000000000000000000122 125.0
YYD3_k127_2119624_3 Involved in the tonB-independent uptake of proteins - - - 0.000000000000001009 91.0
YYD3_k127_2121583_0 AIR synthase related protein, C-terminal domain K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 415.0
YYD3_k127_2121583_1 Fumarylacetoacetate (FAA) hydrolase family K16165 - 3.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000001691 259.0
YYD3_k127_2121583_2 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001317 261.0
YYD3_k127_2121583_3 NUBPL iron-transfer P-loop NTPase K03496 - - 0.000000000000000000000000000000000000000000000000000000002205 210.0
YYD3_k127_2121583_4 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000002758 209.0
YYD3_k127_2121583_5 Multicopper oxidase - - - 0.0000000005304 61.0
YYD3_k127_2125644_0 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 290.0
YYD3_k127_2125644_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 291.0
YYD3_k127_2125644_2 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000825 284.0
YYD3_k127_2125644_3 Calcineurin-like phosphoesterase K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000004729 236.0
YYD3_k127_2125644_4 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000008942 181.0
YYD3_k127_2126014_0 protein conserved in bacteria K09859 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 397.0
YYD3_k127_2126014_1 Peptidoglycan-synthase activator LpoB K07337 - - 0.00000000000000000000000000000000000000000000000000000000002546 213.0
YYD3_k127_2126014_2 DNA recombination K09760 - - 0.0000000000000000000000000000000000000000000000000000000008865 204.0
YYD3_k127_2126014_3 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0000000000007093 69.0
YYD3_k127_2126014_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000001763 71.0
YYD3_k127_2133867_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 338.0
YYD3_k127_2133867_1 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001196 299.0
YYD3_k127_2133867_2 4fe-4S ferredoxin, iron-sulfur binding domain protein K03522,K05337 - - 0.0000000000000000000000000000000000000006121 151.0
YYD3_k127_2133867_3 COGs COG1547 conserved K09763 - - 0.0000000000000000000000009078 107.0
YYD3_k127_2133867_4 - - - - 0.00000000000000000002516 94.0
YYD3_k127_2133867_6 Rieske 2Fe-2S K05710 - - 0.000001171 52.0
YYD3_k127_2135528_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031668,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000004763 263.0
YYD3_k127_2135528_1 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000000000001297 140.0
YYD3_k127_2150931_0 beta-galactosidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005778 335.0
YYD3_k127_2150931_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008748 322.0
YYD3_k127_2150931_2 Domain of unknown function (DUF4870) K09940 - - 0.00000000000000000000000000000000001554 139.0
YYD3_k127_2150931_3 - - - - 0.00000000000000000000007825 105.0
YYD3_k127_2166304_0 Cytochrome C-type biogenesis protein K02198 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005164 366.0
YYD3_k127_2166304_1 glycine decarboxylation via glycine cleavage system K02437 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002115 273.0
YYD3_k127_2166304_2 molybdopterin cofactor binding - - - 0.0000000000000000000000000000000000000000000000000000000000000001542 243.0
YYD3_k127_2166304_3 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000006783 216.0
YYD3_k127_218510_0 COG3288 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 424.0
YYD3_k127_218510_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000001015 96.0
YYD3_k127_218510_2 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000001729 65.0
YYD3_k127_218568_0 Peptidase M16 inactive domain - - - 0.0000000000000000000000000000000000000000000003656 177.0
YYD3_k127_218568_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0002709 52.0
YYD3_k127_2192901_0 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001044 258.0
YYD3_k127_2192901_1 PFAM glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000000001133 219.0
YYD3_k127_2192901_3 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000001541 128.0
YYD3_k127_2192901_4 extracellular polysaccharide biosynthetic process K00568,K03561,K07011,K20444 - 2.1.1.222,2.1.1.64 0.0000000000000002845 88.0
YYD3_k127_2193752_0 Peptidase C26 K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000008573 258.0
YYD3_k127_2193752_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000001251 252.0
YYD3_k127_2193752_2 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K01665 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000004744 211.0
YYD3_k127_2224760_0 tartrate metabolic process K01676,K01678 - 4.2.1.2 2.346e-239 748.0
YYD3_k127_2224760_1 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007879 322.0
YYD3_k127_2224760_2 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K04068,K10026 - 1.97.1.4,4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 284.0
YYD3_k127_2224760_3 6-O-methylguanine DNA methyltransferase, DNA binding domain K07443 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0005488,GO:0005515,GO:0019899,GO:0097159,GO:1901363 - 0.000000000000000000000000001374 115.0
YYD3_k127_2224760_4 amidohydrolase - - - 0.00000009015 61.0
YYD3_k127_2235650_0 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000002526 155.0
YYD3_k127_2235650_1 Glycosyl hydrolases family 39 - - - 0.00000000000002309 85.0
YYD3_k127_2247044_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 405.0
YYD3_k127_2255302_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K00558,K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 2.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 458.0
YYD3_k127_2259591_0 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000001595 246.0
YYD3_k127_2259591_1 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.000000000000000000000000000000000000000000000000000000000000000003552 233.0
YYD3_k127_2259591_2 Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily K09457 - 1.7.1.13 0.0000000000000000000000000000000000000001153 155.0
YYD3_k127_2259591_3 Hydrolase carbon-nitrogen family K13566 - 3.5.1.3 0.00000000000000000000000000000000008598 142.0
YYD3_k127_2259591_4 LemA family K03744 - - 0.000000000000000000000000008631 111.0
YYD3_k127_2259591_5 cell redox homeostasis K03671 - - 0.00000000000000000000000001383 116.0
YYD3_k127_2259591_6 PFAM Cold-shock protein, DNA-binding K03704 - - 0.000000000000000000000002894 109.0
YYD3_k127_2259591_7 PFAM Cold-shock protein, DNA-binding K03704 - - 0.00000000000000002398 86.0
YYD3_k127_2264074_0 Carbonic anhydrase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004664 281.0
YYD3_k127_2264074_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003393 264.0
YYD3_k127_2264074_2 DsrE/DsrF-like family - - - 0.0000000000000000000000000000000000000000004471 171.0
YYD3_k127_2264074_3 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000007913 140.0
YYD3_k127_2264074_4 Aminoacyl-tRNA editing domain K03976 - - 0.0000000000000000000000000003365 121.0
YYD3_k127_2264074_5 Alanine dehydrogenase/PNT, C-terminal domain K13979 GO:0003674,GO:0003824,GO:0004033,GO:0008106,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0055114 - 0.0000000001891 61.0
YYD3_k127_2294094_0 RHS repeat-associated core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002893 254.0
YYD3_k127_2294094_1 COG3209 Rhs family protein - - - 0.00000002816 69.0
YYD3_k127_2296124_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000001027 218.0
YYD3_k127_2296124_1 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16786,K16787 - - 0.00000000000000000000000000000000000000000000000002406 190.0
YYD3_k127_2296124_2 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16787 - - 0.0000000000000000000000000000000000000000004205 167.0
YYD3_k127_2296124_3 NusG domain II K00805 - 2.5.1.30 0.000000000000000000843 90.0
YYD3_k127_2296124_4 Heptaprenyl diphosphate synthase component I K00805 - 2.5.1.30 0.0000006745 57.0
YYD3_k127_2299599_0 phosphoglycerate kinase activity K00927,K01803 GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3,5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000992 509.0
YYD3_k127_2299599_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 484.0
YYD3_k127_2299599_2 nucleotide-excision repair K03702,K08999 GO:0002682,GO:0002684,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006950,GO:0008150,GO:0009314,GO:0009380,GO:0009605,GO:0009607,GO:0009628,GO:0016020,GO:0032991,GO:0035821,GO:0042802,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0071944,GO:0075136,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000413 263.0
YYD3_k127_2299599_3 proteolysis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004225 248.0
YYD3_k127_2299599_4 competence protein K03654 - 3.6.4.12 0.000000000000000000000000000000000000000007428 163.0
YYD3_k127_2320940_0 GTP-binding protein TypA K06207 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007695 518.0
YYD3_k127_2320940_1 HI0933 family K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 371.0
YYD3_k127_2320940_2 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 300.0
YYD3_k127_2320940_3 SMART Tetratricopeptide - - - 0.000000000000000000000000000000000000000000000000000000000002799 231.0
YYD3_k127_2320940_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.0000000000000000000000000000000000007016 150.0
YYD3_k127_2320940_5 double-stranded DNA 3'-5' exodeoxyribonuclease activity - - - 0.000000000000008105 75.0
YYD3_k127_2320940_6 Domain of unknown function (DUF309) K09763 - - 0.0000000000004685 75.0
YYD3_k127_2325413_0 DNA-templated transcription, termination K02887,K03628 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 6.301e-228 711.0
YYD3_k127_2325413_1 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000001456 273.0
YYD3_k127_2325413_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000002068 67.0
YYD3_k127_2326139_0 Amidohydrolase family - - - 2.959e-292 917.0
YYD3_k127_2328257_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 606.0
YYD3_k127_2328257_1 Surface antigen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 439.0
YYD3_k127_2328257_10 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.0000000000000004921 81.0
YYD3_k127_2328257_11 - - - - 0.000003361 53.0
YYD3_k127_2328257_12 Amino acid permease K16263 - - 0.000008247 51.0
YYD3_k127_2328257_13 Protein of unknown function (DUF1428) - - - 0.00001072 49.0
YYD3_k127_2328257_14 Protein of unknown function (DUF1428) - - - 0.00001681 48.0
YYD3_k127_2328257_15 amino acid K16263 - - 0.0004688 46.0
YYD3_k127_2328257_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000006507 238.0
YYD3_k127_2328257_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07032 - - 0.00000000000000000000000000000000000000000000000000000000002304 209.0
YYD3_k127_2328257_4 YCII-related domain - - - 0.000000000000000000000000000000000000000000000001021 178.0
YYD3_k127_2328257_5 PFAM bifunctional deaminase-reductase domain protein - - - 0.000000000000000000000000000000000000000000002114 177.0
YYD3_k127_2328257_6 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000003073 182.0
YYD3_k127_2328257_7 Doxx family K15977 - - 0.00000000000000000000000000000000000000001075 159.0
YYD3_k127_2328257_8 Cytochrome c - - - 0.00000000000000000000000000000000000001886 160.0
YYD3_k127_2328257_9 - - - - 0.000000000000000000001536 96.0
YYD3_k127_234276_0 - - - - 3.779e-205 660.0
YYD3_k127_234276_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 320.0
YYD3_k127_234276_2 Methionine synthase B12-binding module cap domain protein K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000004333 241.0
YYD3_k127_234276_3 Belongs to the carbohydrate kinase PfkB family. LacC subfamily K00882,K00917 - 2.7.1.144,2.7.1.56 0.0000000000000000000000000000000000000008697 169.0
YYD3_k127_234276_4 lyase activity K11645 - 4.1.2.13 0.00000000000009301 73.0
YYD3_k127_2342962_0 lysine 2,3-aminomutase activity K01843 - 5.4.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007756 523.0
YYD3_k127_2342962_1 ATP-grasp domain K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005805 340.0
YYD3_k127_2342962_2 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006299 297.0
YYD3_k127_2342962_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000003042 153.0
YYD3_k127_2352276_0 Amp-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003158 486.0
YYD3_k127_2386126_0 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003292 417.0
YYD3_k127_2386126_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005946 297.0
YYD3_k127_2394406_0 Asparaginyl-tRNA synthetase K01893 GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 571.0
YYD3_k127_2394406_1 ATPase activity K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002963 253.0
YYD3_k127_2405301_0 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000001199 233.0
YYD3_k127_2405301_1 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000007005 199.0
YYD3_k127_2405301_2 cellulose binding K12132 - 2.7.11.1 0.00000000000007439 73.0
YYD3_k127_2405301_3 PFAM Integral membrane protein DUF95 - - - 0.00000000005706 64.0
YYD3_k127_2408344_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 6.093e-222 699.0
YYD3_k127_2408344_1 Belongs to the glycosyl hydrolase 57 family K22451 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 350.0
YYD3_k127_2408344_2 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000008264 177.0
YYD3_k127_2408344_3 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.000000000000000003462 98.0
YYD3_k127_2421203_0 NADP oxidoreductase coenzyme F420-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001729 277.0
YYD3_k127_2421203_1 Histidine kinase K02480,K07683 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000007452 229.0
YYD3_k127_2421203_2 PFAM Signal transduction histidine kinase, internal region - - - 0.0001388 55.0
YYD3_k127_2422304_0 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008614 509.0
YYD3_k127_2422304_1 Methyltransferase domain - - - 0.000000000000000000000008642 109.0
YYD3_k127_2422304_2 Membrane protein involved in the export of o-antigen and teichoic acid K03328 - - 0.000004834 56.0
YYD3_k127_2444316_0 Aminotransferase K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000006904 230.0
YYD3_k127_2444316_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000001036 67.0
YYD3_k127_2506473_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 501.0
YYD3_k127_2506473_1 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000000000004608 104.0
YYD3_k127_2506473_2 PFAM Major Facilitator Superfamily - - - 0.00000000000000000002733 100.0
YYD3_k127_250828_0 isoleucyl-tRNA aminoacylation K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0 1343.0
YYD3_k127_250828_1 purine-nucleoside phosphorylase activity K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 398.0
YYD3_k127_250828_10 Protein of unknown function (DUF541) K09807 - - 0.0000000000000004172 88.0
YYD3_k127_250828_11 AcrB/AcrD/AcrF family K18138,K18303 - - 0.00000000000176 69.0
YYD3_k127_250828_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 380.0
YYD3_k127_250828_3 PFAM PP-loop domain protein K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004064 308.0
YYD3_k127_250828_4 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000005495 243.0
YYD3_k127_250828_5 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000001906 242.0
YYD3_k127_250828_6 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000000000000000008711 217.0
YYD3_k127_250828_7 zinc ion binding K06204 - - 0.0000000000000000000000000000000005387 140.0
YYD3_k127_250828_8 DivIVA protein K04074 - - 0.0000000000000000000000000000007701 128.0
YYD3_k127_250828_9 Protein of unknown function (DUF2905) - - - 0.00000000000000003644 83.0
YYD3_k127_2513283_0 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008799 339.0
YYD3_k127_2513283_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714,K21062 - 3.5.4.22,4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007751 314.0
YYD3_k127_2513283_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000003342 219.0
YYD3_k127_2513283_3 pfkB family carbohydrate kinase K00847,K00852,K18478 - 2.7.1.15,2.7.1.184,2.7.1.4 0.00000000000000000000000000000004042 138.0
YYD3_k127_2513283_4 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000003765 121.0
YYD3_k127_2531730_0 Biotin carboxylase K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 555.0
YYD3_k127_2531730_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005664 562.0
YYD3_k127_2531730_2 Periplasmic component of the Tol biopolymer transport system K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006752 449.0
YYD3_k127_2531730_3 peroxiredoxin activity K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000004674 183.0
YYD3_k127_2531730_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000008145 166.0
YYD3_k127_2531730_5 carbon-nitrogen ligase activity, with glutamine as amido-N-donor K09117 - - 0.000000000000000000000000000000000000000004546 160.0
YYD3_k127_2531730_6 PA domain - - - 0.00000000000000008135 84.0
YYD3_k127_2531730_7 Colicin V production protein K03558 - - 0.00000000007246 70.0
YYD3_k127_2531730_8 Biotin-requiring enzyme K01960 - 6.4.1.1 0.000000003617 63.0
YYD3_k127_2543086_0 ABC transporter K06158 - - 9.726e-210 673.0
YYD3_k127_2543086_1 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 467.0
YYD3_k127_2543086_2 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 419.0
YYD3_k127_2543086_3 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 381.0
YYD3_k127_2543086_4 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004925 257.0
YYD3_k127_2543086_5 thiolester hydrolase activity - - - 0.000000000000000000000000000000000000001052 159.0
YYD3_k127_2543086_6 Domain of unknown function (DUF386) - - - 0.0000000000000000000000000000000000000975 147.0
YYD3_k127_2546077_0 PFAM L-fucose isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 563.0
YYD3_k127_2546077_1 Periplasmic binding protein domain - - - 0.000000000000000000000000000000000000000004061 157.0
YYD3_k127_2571840_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004402 445.0
YYD3_k127_2571840_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000006281 184.0
YYD3_k127_2575674_2 AAA ATPase domain - - - 0.00000000001239 77.0
YYD3_k127_2576483_0 protein trimerization - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 479.0
YYD3_k127_2576483_1 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000003107 226.0
YYD3_k127_2576483_10 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00001681 50.0
YYD3_k127_2576483_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000001846 206.0
YYD3_k127_2576483_3 Integral membrane protein DUF92 K00981,K18678 GO:0005575,GO:0016020 2.7.1.182,2.7.7.41 0.0000000000000000000000000000000000000000000000000036 191.0
YYD3_k127_2576483_4 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.0000000000000000000000000000000000000004819 160.0
YYD3_k127_2576483_6 receptor K16092 - - 0.00000000001601 77.0
YYD3_k127_2576483_7 lysyltransferase activity K07027 - - 0.0000001848 56.0
YYD3_k127_2576483_8 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000003612 54.0
YYD3_k127_2576483_9 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03749 - - 0.00001154 57.0
YYD3_k127_2580144_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009536,GO:0040007,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 576.0
YYD3_k127_2580144_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000000000000000000000000000000000000000000000007477 214.0
YYD3_k127_2583718_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 3.864e-212 672.0
YYD3_k127_2583718_1 polyribonucleotide nucleotidyltransferase activity K02945,K03527,K07571,K12132 GO:0005575,GO:0005576,GO:0018995,GO:0020003,GO:0030430,GO:0033643,GO:0033646,GO:0033655,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0065010 1.17.7.4,2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 574.0
YYD3_k127_2583718_2 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005018 563.0
YYD3_k127_2583718_3 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K18707 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035598,GO:0035600,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050497,GO:0071704,GO:0090304,GO:1901360 2.8.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009216 467.0
YYD3_k127_2583718_4 Protein of unknown function (DUF512) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 397.0
YYD3_k127_2583718_5 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000001794 237.0
YYD3_k127_2583718_6 - - - - 0.00000000000000000000000000000000000000001786 162.0
YYD3_k127_2590504_0 Aminotransferase K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004508 520.0
YYD3_k127_2590504_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 435.0
YYD3_k127_2590504_10 Pilus assembly protein K02461,K02662,K02663,K12288 GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.00000009483 63.0
YYD3_k127_2590504_2 PFAM aminotransferase, class I K00812,K10907 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002483 375.0
YYD3_k127_2590504_3 phosphoenolpyruvate carboxykinase (ATP) activity K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000003537 236.0
YYD3_k127_2590504_4 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.0000000000000000000000000000000000000000000000000001974 194.0
YYD3_k127_2590504_5 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K02652,K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0017076,GO:0030234,GO:0030312,GO:0030554,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036094,GO:0040007,GO:0042594,GO:0044464,GO:0050790,GO:0050896,GO:0051082,GO:0051716,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0071496,GO:0071944,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000001083 162.0
YYD3_k127_2590504_6 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.000000000000000000000000000000000000000002461 161.0
YYD3_k127_2590504_7 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000202 124.0
YYD3_k127_2590504_8 Putative regulatory protein - - - 0.0000000000000000003733 91.0
YYD3_k127_2590504_9 Helix-hairpin-helix motif K02237 - - 0.000000000000001503 83.0
YYD3_k127_2592181_0 stress-induced mitochondrial fusion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 301.0
YYD3_k127_2592181_1 carboxypeptidase activity K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000000000000000000000000000000001943 248.0
YYD3_k127_2592181_2 Sodium/hydrogen exchanger family K11105 - - 0.0000000000000000000000002516 106.0
YYD3_k127_2605876_0 nucleotide-excision repair K03701 - - 0.0 1314.0
YYD3_k127_2605876_1 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009476 381.0
YYD3_k127_2605876_2 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007937 321.0
YYD3_k127_2605876_3 PFAM peptidase T2 asparaginase 2 K13051 - 3.4.19.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 291.0
YYD3_k127_2605876_4 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000152 268.0
YYD3_k127_2605876_5 protein trimerization - - - 0.0000000000000000005672 93.0
YYD3_k127_2607986_0 carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 550.0
YYD3_k127_2607986_1 LysM domain K08307,K12204 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 504.0
YYD3_k127_2615064_0 Peptidase family M28 K05994 - 3.4.11.10 0.000000000000000000000000000000000000006862 161.0
YYD3_k127_2615064_1 PFAM FecR protein K20276 - - 0.00000000000000000000002603 110.0
YYD3_k127_2616969_0 peptidase S9 prolyl oligopeptidase active site K01278 - 3.4.14.5 7.122e-198 631.0
YYD3_k127_2630826_0 serine-type peptidase activity K04773 - - 9.667e-253 803.0
YYD3_k127_2630826_1 TIGRFAM Drug resistance transporter Bcr CflA subfamily K03446,K07552 - - 0.0000000000000000000000000000000000000000001006 167.0
YYD3_k127_2630826_2 membrane - - - 0.000000001159 59.0
YYD3_k127_2637826_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006492 304.0
YYD3_k127_2637826_1 Highly conserved protein containing a thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000377 265.0
YYD3_k127_2638600_0 undecaprenyl-phosphate glucose phosphotransferase activity K03606,K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 572.0
YYD3_k127_2638600_1 malonyl-CoA biosynthetic process K01962,K01963 GO:0001676,GO:0003674,GO:0003824,GO:0003989,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009317,GO:0009329,GO:0009987,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0019752,GO:0032787,GO:0032991,GO:0042759,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576,GO:1902494,GO:1990234 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 450.0
YYD3_k127_2638600_2 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005491 425.0
YYD3_k127_2638600_3 transferase activity, transferring glycosyl groups K00721,K03820 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008045 338.0
YYD3_k127_2638600_4 Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues K01791,K08068 GO:0000271,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0008761,GO:0009058,GO:0009059,GO:0009246,GO:0009987,GO:0016051,GO:0016853,GO:0016854,GO:0016857,GO:0033692,GO:0034637,GO:0034645,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046378,GO:0071704,GO:1901135,GO:1901137,GO:1901576 3.2.1.183,5.1.3.14 0.0000000000000000000000000000000000000000000000009273 180.0
YYD3_k127_2640470_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0030312,GO:0044237,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 533.0
YYD3_k127_2640470_1 PFAM histidine triad (HIT) protein K19710 - 2.7.7.53 0.0000000000000000000000000000000000000000000000000001632 192.0
YYD3_k127_2640470_2 PFAM sigma-70 region 2 domain protein K03088 - - 0.00000000000000000000000000000000000000000000001384 177.0
YYD3_k127_2640470_3 FMN binding - - - 0.0000000000000000000000000000000000000000000001518 172.0
YYD3_k127_2645160_0 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 467.0
YYD3_k127_2645160_1 methyltransferase - - - 0.00000000000000000000000000000000000000000000005163 181.0
YYD3_k127_2655873_0 Bacterial extracellular solute-binding protein, family 7 K11688,K21395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006877 345.0
YYD3_k127_2655873_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002241 249.0
YYD3_k127_2655873_2 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.0000000000000000000002214 103.0
YYD3_k127_2655873_3 response regulator - - - 0.0000000000000000000009112 96.0
YYD3_k127_2656820_0 phosphorelay signal transduction system - - - 1.21e-200 637.0
YYD3_k127_2656820_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 330.0
YYD3_k127_2671580_0 LVIVD repeat - - - 0.0 1138.0
YYD3_k127_2671580_1 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001346 242.0
YYD3_k127_2671580_2 Cytochrome c554 and c-prime - - - 0.000000008824 66.0
YYD3_k127_2671580_3 - - - - 0.0000007823 60.0
YYD3_k127_2673424_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 515.0
YYD3_k127_2673424_1 Enoyl-CoA hydratase K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 331.0
YYD3_k127_2673424_2 Protein of unknown function (DUF2652) - - - 0.000000000000000000000000000000000000000000000000000007955 204.0
YYD3_k127_2673424_3 Rossmann-like domain - - - 0.000000000000000000000000000001811 130.0
YYD3_k127_2673424_4 Catalyzes the attachment of glycine to tRNA(Gly) K01880 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009345,GO:0009987,GO:0010467,GO:0016070,GO:0016594,GO:0016597,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042165,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046983,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.14 0.000000000000000000278 89.0
YYD3_k127_2676333_0 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 609.0
YYD3_k127_2676333_1 HELICc2 K03722 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005567 296.0
YYD3_k127_268148_0 pfam abc K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000001828 235.0
YYD3_k127_268148_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000218 189.0
YYD3_k127_268148_2 macromolecule localization K01992,K09690 - - 0.0000000000000000000000000000000000000001285 162.0
YYD3_k127_2682596_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 452.0
YYD3_k127_2682596_1 Glutamine amidotransferase domain K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000804 311.0
YYD3_k127_2689186_0 with chaperone activity ATP-binding subunit K03696 - - 1.063e-196 619.0
YYD3_k127_2689186_1 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000003708 117.0
YYD3_k127_2701451_0 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 311.0
YYD3_k127_2701451_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000005972 182.0
YYD3_k127_2701451_2 PFAM surface antigen (D15) K07001 - - 0.00000000000000000000001446 106.0
YYD3_k127_2701451_3 oxidoreductase activity - - - 0.00000000000322 69.0
YYD3_k127_2701451_4 peptidyl-tyrosine sulfation - - - 0.0008164 48.0
YYD3_k127_2745075_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008456 294.0
YYD3_k127_2745075_1 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000007409 194.0
YYD3_k127_2758102_0 Oligopeptidase F K08602 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 1.718e-207 664.0
YYD3_k127_2758102_1 Oligopeptidase F K08602 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 300.0
YYD3_k127_2758102_2 Anti-sigma-K factor rskA - - - 0.0000000000000000785 85.0
YYD3_k127_275848_0 Papain-like cysteine protease AvrRpt2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005918 323.0
YYD3_k127_275848_1 major pilin protein fima - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003904 308.0
YYD3_k127_275848_3 DoxX - - - 0.0000000000000000000003111 102.0
YYD3_k127_275848_4 Rhodanese Homology Domain - - - 0.000000000000000000004092 100.0
YYD3_k127_2770408_0 Radical SAM superfamily K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007564 496.0
YYD3_k127_2770408_1 Pyridoxal-phosphate dependent enzyme K01751 - 4.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004493 356.0
YYD3_k127_2770408_2 N-terminal domain of galactosyltransferase - - - 0.00000000000000000000000004849 111.0
YYD3_k127_278971_0 Predicted membrane protein (DUF2339) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000131 251.0
YYD3_k127_278971_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000000000000002885 209.0
YYD3_k127_278971_2 RDD family - - - 0.000000000000000000000000000000000000000007529 159.0
YYD3_k127_2825199_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 2.897e-250 791.0
YYD3_k127_2825199_1 GTP-binding protein TypA K06207 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007011 280.0
YYD3_k127_2825199_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000003409 192.0
YYD3_k127_2825199_3 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.00000000000000000000000000000000001962 147.0
YYD3_k127_2825199_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000177 112.0
YYD3_k127_2825199_5 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000001165 68.0
YYD3_k127_2825199_6 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000003565 57.0
YYD3_k127_2828905_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 523.0
YYD3_k127_2828905_1 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003053 267.0
YYD3_k127_2833084_0 phosphopentomutase activity K01839 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008973,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 480.0
YYD3_k127_2833084_1 Ethanolamine utilization protein EutN K04028 - - 0.0000000000000000000000000005937 114.0
YYD3_k127_2833084_2 GGDEF domain K02478 - 2.7.13.3 0.00000000006513 66.0
YYD3_k127_2833084_4 nuclease activity K07064 - - 0.0001436 51.0
YYD3_k127_2846517_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 532.0
YYD3_k127_2846517_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007418 376.0
YYD3_k127_2846517_2 acetylesterase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001326 256.0
YYD3_k127_2846517_3 PFAM YicC domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001967 246.0
YYD3_k127_2846517_4 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000006138 191.0
YYD3_k127_2846517_5 deaminated base DNA N-glycosylase activity K21929 - 3.2.2.27 0.000000000000000000000000000000000003345 139.0
YYD3_k127_2846517_6 deaminated base DNA N-glycosylase activity K21929 - 3.2.2.27 0.0000000000000000000000000000009095 127.0
YYD3_k127_2846517_8 Domain of unknown function (DUF4412) - - - 0.000000000000001616 86.0
YYD3_k127_2847436_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009292,GO:0009294,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030420,GO:0031668,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0046483,GO:0050896,GO:0051704,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 431.0
YYD3_k127_2847436_1 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008104,GO:0008150,GO:0009966,GO:0010646,GO:0010738,GO:0023051,GO:0033036,GO:0034237,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051018,GO:0051179,GO:0065007,GO:1902531 3.1.4.58 0.000000000000000000000000000000001341 136.0
YYD3_k127_2853633_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 371.0
YYD3_k127_2853633_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000001238 207.0
YYD3_k127_2853633_2 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000000000000000000000000000000000000006303 158.0
YYD3_k127_2853633_3 Psort location Cytoplasmic, score K00059,K07535 - 1.1.1.100 0.000000000000000000000000000007921 133.0
YYD3_k127_2853633_4 TIGRFAM daunorubicin resistance ABC transporter, inner membrane subunit B K01992 - - 0.0000000000000005892 87.0
YYD3_k127_2853633_5 nUDIX hydrolase K03574,K08320 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.6.1.55,3.6.1.65 0.000000000000004226 78.0
YYD3_k127_2867376_0 PFAM Aminotransferase class I and II K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 419.0
YYD3_k127_2867376_1 thiamine-phosphate kinase activity K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000001646 201.0
YYD3_k127_2867376_2 Diacylglycerol kinase catalytic domain - - - 0.0000000000000000000000001683 113.0
YYD3_k127_2872387_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 562.0
YYD3_k127_2872387_1 serine-type endopeptidase activity K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 419.0
YYD3_k127_2872387_2 PFAM Transketolase central region K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009814 363.0
YYD3_k127_2872387_3 PFAM Transketolase domain protein K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 316.0
YYD3_k127_2872387_4 Aldehyde dehydrogenase family K22187 - - 0.0000000000000000000000000000000000000000000000000000000000000004212 224.0
YYD3_k127_2872387_5 acyl-phosphate glycerol-3-phosphate acyltransferase activity K08591 - 2.3.1.15 0.00000000007094 67.0
YYD3_k127_2873112_0 DNA topoisomerase II activity K02470 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009330,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140097,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 560.0
YYD3_k127_2873112_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000001102 267.0
YYD3_k127_2873112_2 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000173 261.0
YYD3_k127_2873112_3 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.00000000000009661 76.0
YYD3_k127_2875668_0 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K16950 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 437.0
YYD3_k127_2875668_1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.000000000000000000000000000000000000000000000002534 178.0
YYD3_k127_2875668_2 cyclic nucleotide binding K10914 - - 0.00000000000000000000000000000000000000000000003537 174.0
YYD3_k127_287922_0 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD - - - 0.000000000000000000000000000000000000000000000000000003056 205.0
YYD3_k127_287922_1 photosystem II stabilization - - - 0.0000000000000000000000000000000000000000000000000001899 195.0
YYD3_k127_287922_2 Domain of unknown function (DUF4835) - - - 0.000000000000000000000000000000000000000000000003807 187.0
YYD3_k127_287922_3 Helix-hairpin-helix motif - - - 0.00000000000000000000000000000002976 141.0
YYD3_k127_2880790_0 COG0520 Selenocysteine lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004879 475.0
YYD3_k127_2880790_1 Transport permease protein K01992 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006855,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0015562,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0033554,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 343.0
YYD3_k127_2880790_2 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 313.0
YYD3_k127_2880790_3 Domain of unknown function (DUF4382) - - - 0.00000000000000000000000000000000000003826 154.0
YYD3_k127_2880790_4 methylglyoxal synthase K01734 - 4.2.3.3 0.0000000000000000000000000000000000006513 140.0
YYD3_k127_2880790_5 chaperone-mediated protein folding - - - 0.0000000000000000000000000000002621 140.0
YYD3_k127_2880790_6 methylglyoxal synthase activity K01734 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0008150,GO:0008152,GO:0008929,GO:0009058,GO:0009438,GO:0009987,GO:0016829,GO:0016835,GO:0016838,GO:0019242,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0071704,GO:1901576 4.2.3.3 0.000000000000000001951 87.0
YYD3_k127_2880790_7 Psort location Cytoplasmic, score 9.97 K00640 - 2.3.1.30 0.000002439 51.0
YYD3_k127_2885416_0 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 474.0
YYD3_k127_2885416_1 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00175,K00187 - 1.2.7.11,1.2.7.3,1.2.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 416.0
YYD3_k127_2885416_2 acetyl-CoA hydrolase activity K01067 - 3.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 333.0
YYD3_k127_2885416_3 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00177,K00187 - 1.2.7.3,1.2.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008286 270.0
YYD3_k127_2885416_4 4 iron, 4 sulfur cluster binding K00176 - 1.2.7.3 0.000000000000000000000000000005046 123.0
YYD3_k127_2889037_0 2 iron, 2 sulfur cluster binding K02823 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016645,GO:0016646,GO:0042602,GO:0052875,GO:0055114 - 0.0000000000000000000000000000000000000000000000000000000000007108 220.0
YYD3_k127_2889037_1 protein trimerization - - - 0.000000000000000000000000000000000000000000000000001126 207.0
YYD3_k127_2889037_2 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.0000000000000000000345 94.0
YYD3_k127_2889037_3 Cytochrome C oxidase, mono-heme subunit/FixO K00405 - - 0.00000000000000001093 85.0
YYD3_k127_2889037_4 cytochrome c K00406 - - 0.00000000000000229 83.0
YYD3_k127_2892272_0 COG COG1132 ABC-type multidrug transport system ATPase and permease components Defense mechanisms K06147 - - 0.00000000000000000000000000000000000000000000002033 182.0
YYD3_k127_2892272_1 Amidohydrolase - - - 0.000002467 50.0
YYD3_k127_2892272_2 pathogenesis - - - 0.00009391 54.0
YYD3_k127_2916224_0 Sigma-54 interaction domain K03405 - 6.6.1.1 1.991e-194 618.0
YYD3_k127_2916224_1 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 429.0
YYD3_k127_2916224_2 mannose-ethanolamine phosphotransferase activity K01077 GO:0003674,GO:0003824,GO:0004035,GO:0004346,GO:0005488,GO:0005575,GO:0005623,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008877,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0046872,GO:0046914,GO:0050308,GO:0050309,GO:0098519 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004671 350.0
YYD3_k127_2916224_3 Glycosyl transferase, family 9 K02843 - - 0.00000000000004363 77.0
YYD3_k127_2929909_0 secondary active p-aminobenzoyl-glutamate transmembrane transporter activity K12942 - - 3.176e-197 632.0
YYD3_k127_2929909_1 Asparaginase K01424,K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.1,3.5.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 417.0
YYD3_k127_2929909_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 413.0
YYD3_k127_2929909_3 Belongs to the pseudouridine synthase RsuA family K06181 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.20 0.000000000000000000000000000000000000000000000000000000000000000000005563 241.0
YYD3_k127_2929909_4 Belongs to the glycosyl hydrolase 5 (cellulase A) family K19355 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0004567,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010412,GO:0015923,GO:0016052,GO:0016787,GO:0016798,GO:0016985,GO:0016998,GO:0043170,GO:0044036,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0046355,GO:0071554,GO:0071704,GO:1901575 3.2.1.78 0.000003531 54.0
YYD3_k127_2930011_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 1.727e-288 902.0
YYD3_k127_2930011_1 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000007642 225.0
YYD3_k127_2930011_2 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.9 0.00000000000000000000000000000000000000001472 154.0
YYD3_k127_2930011_3 - - - - 0.00000000000000000000000000007644 119.0
YYD3_k127_2930011_4 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.0000000000000000000002882 101.0
YYD3_k127_2940908_0 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 333.0
YYD3_k127_2940908_1 BMC - - - 0.0000000000000000000000000000000000000000003057 160.0
YYD3_k127_2940908_2 ethanolamine catabolic process - - - 0.0000000000000000000000000000000001608 138.0
YYD3_k127_2947661_0 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 591.0
YYD3_k127_2947661_1 HMGL-like K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 350.0
YYD3_k127_2954634_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 4.225e-209 678.0
YYD3_k127_2954634_1 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 432.0
YYD3_k127_2954634_2 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 374.0
YYD3_k127_2954634_3 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000004622 208.0
YYD3_k127_2954634_4 phosphatidate phosphatase activity K19302 - 3.6.1.27 0.000000000000000000000000000000000000002286 158.0
YYD3_k127_2954634_5 DinB superfamily - - - 0.00000000000000000000000000004675 124.0
YYD3_k127_2954634_6 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000002805 94.0
YYD3_k127_2954634_7 tRNA pseudouridine synthase activity K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000001285 59.0
YYD3_k127_2979332_0 Belongs to the GTP cyclohydrolase I type 2 NIF3 family K07164,K22391 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 342.0
YYD3_k127_2979332_1 - K07164,K22391 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000003388 208.0
YYD3_k127_2979332_2 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000005325 145.0
YYD3_k127_2979332_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000001369 86.0
YYD3_k127_2979975_0 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001286 266.0
YYD3_k127_2979975_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000005974 160.0
YYD3_k127_2979975_2 COG0607 Rhodanese-related sulfurtransferase - - - 0.0000000000000000002663 91.0
YYD3_k127_2979975_3 PFAM Rhodanese domain protein - - - 0.00000000000009936 78.0
YYD3_k127_2979975_4 Metallo-beta-lactamase superfamily - - - 0.0000008285 58.0
YYD3_k127_3009437_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001052 274.0
YYD3_k127_3009437_1 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000008026 199.0
YYD3_k127_3009437_2 Pyridine nucleotide-disulphide oxidoreductase K00362,K05297 - 1.18.1.1,1.7.1.15 0.00000000002721 71.0
YYD3_k127_3021278_0 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 395.0
YYD3_k127_3026881_0 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 7.251e-257 797.0
YYD3_k127_3026881_1 pfkB family carbohydrate kinase - - - 1.881e-196 616.0
YYD3_k127_3026881_2 Domain of unknown function (DUF2088) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 409.0
YYD3_k127_3026881_3 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate K03473 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0033711,GO:0034641,GO:0036001,GO:0036094,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.290 0.000000000000000000000000000000000125 140.0
YYD3_k127_3026881_4 KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.0000000000009076 70.0
YYD3_k127_3070037_0 transporter of a GTP-driven Fe(2 ) uptake system - - - 1.924e-209 661.0
YYD3_k127_3070037_1 ferrous iron transmembrane transporter activity K04759 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 369.0
YYD3_k127_3070037_11 amino acid activation for nonribosomal peptide biosynthetic process K05996 - 3.4.17.18 0.00000000000000000001215 105.0
YYD3_k127_3070037_2 iron ion homeostasis K03322,K03709,K04758 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005984 357.0
YYD3_k127_3070037_3 Saccharopine dehydrogenase C-terminal domain K19064 - 1.4.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 353.0
YYD3_k127_3070037_4 N-Acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 359.0
YYD3_k127_3070037_5 FES K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000001343 247.0
YYD3_k127_3070037_6 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000002441 207.0
YYD3_k127_3070037_7 Iron dependent repressor, metal binding and dimerisation domain K03709 - - 0.000000000000000000000000000000000000000000000000000001845 198.0
YYD3_k127_3070037_8 Protein involved in meta-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000007552 177.0
YYD3_k127_3070037_9 Psort location Cytoplasmic, score 8.96 K03653 - 4.2.99.18 0.0000000000000000000000000000000001564 142.0
YYD3_k127_3072513_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000001089 229.0
YYD3_k127_3072513_1 - - - - 0.0000000000000000003976 98.0
YYD3_k127_3072513_2 Fibronectin type III domain protein - - - 0.000000000000002292 79.0
YYD3_k127_3072615_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043,K13797 GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.0 1421.0
YYD3_k127_3072615_1 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000000005626 166.0
YYD3_k127_3072615_2 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864,K02935 GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0017148,GO:0019222,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - 0.000000000000000000000000000000004574 133.0
YYD3_k127_3083300_0 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 587.0
YYD3_k127_3083300_1 ferredoxin-NADP+ reductase activity K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 469.0
YYD3_k127_3083300_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.0000001812 54.0
YYD3_k127_3094465_0 - - - - 0.00000000000000000000000000000000000000000000000000000002711 205.0
YYD3_k127_3094465_1 Glucose-6-phosphate dehydrogenase subunit - - - 0.00000000000000000000001966 110.0
YYD3_k127_3094465_2 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.0000000000000000001792 102.0
YYD3_k127_3094465_3 Belongs to the N(4) N(6)-methyltransferase family - - - 0.000000001514 69.0
YYD3_k127_3101856_0 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000000000000000000278 183.0
YYD3_k127_3101856_1 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.000000000000000000000000000000118 128.0
YYD3_k127_3101856_2 Methyltransferase small domain K02493 - 2.1.1.297 0.0000000000000000000000000000001789 134.0
YYD3_k127_3101856_3 Conserved protein domain typically associated with flavoprotein - - - 0.00000000000000000001434 99.0
YYD3_k127_3101856_4 phosphatidylinositol metabolic process K13671,K16647 - 2.4.2.47 0.00000004575 65.0
YYD3_k127_3101856_5 methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.0000132 49.0
YYD3_k127_3101939_1 glycolate biosynthetic process K01091,K06019 - 3.1.3.18,3.6.1.1 0.00000002746 56.0
YYD3_k127_3119491_0 Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate K00451 - 1.13.11.5 1.242e-215 672.0
YYD3_k127_3119491_1 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 477.0
YYD3_k127_3119491_2 Transposase IS66 family - - - 0.000000000000000003367 87.0
YYD3_k127_3119491_3 endo-1,4-beta-xylanase activity K01181 - 3.2.1.8 0.000000000006072 68.0
YYD3_k127_313620_0 ATPase-coupled phosphate ion transmembrane transporter activity K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007116 381.0
YYD3_k127_313620_1 negative regulation of phosphate transmembrane transport K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.00000000000000000000000000000000000000000000000000002876 195.0
YYD3_k127_313620_2 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000008117 193.0
YYD3_k127_313620_3 Copper resistance protein D - - - 0.0001978 49.0
YYD3_k127_3141401_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 473.0
YYD3_k127_3141401_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 411.0
YYD3_k127_3141401_2 iron ion homeostasis K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001068 280.0
YYD3_k127_3141401_3 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000003041 229.0
YYD3_k127_3141401_4 - - - - 0.000000049 57.0
YYD3_k127_3144740_0 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 289.0
YYD3_k127_3144740_1 PFAM Uncharacterised ACR, COG1259 K03617,K03702,K08999 GO:0002682,GO:0002684,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006950,GO:0008150,GO:0009314,GO:0009380,GO:0009605,GO:0009607,GO:0009628,GO:0016020,GO:0030312,GO:0032991,GO:0035821,GO:0042802,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0071944,GO:0075136,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0000000000000000000000000000000000000000000000000005422 188.0
YYD3_k127_3144740_2 YbbR-like protein - GO:0008150,GO:0031279,GO:0031281,GO:0043085,GO:0044093,GO:0045761,GO:0045762,GO:0050790,GO:0051339,GO:0051349,GO:0065007,GO:0065009 - 0.0000000000000000000000000000001004 136.0
YYD3_k127_3145407_0 Malic enzyme, N-terminal domain K00027 - 1.1.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009449 406.0
YYD3_k127_3145407_1 peptidase activity, acting on L-amino acid peptides K01187,K01448,K07752 - 3.2.1.20,3.4.17.22,3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000002198 245.0
YYD3_k127_3145407_2 cellulose binding - - - 0.000000000000000000000000000266 121.0
YYD3_k127_3145407_3 pyrroloquinoline quinone binding K00117 - 1.1.5.2 0.000000000000000000000000001257 114.0
YYD3_k127_3145407_4 Methylase of polypeptide chain release factors - - - 0.000000001003 61.0
YYD3_k127_3152537_0 Cys/Met metabolism PLP-dependent enzyme K01739 - 2.5.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 306.0
YYD3_k127_3152537_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000002661 246.0
YYD3_k127_3152537_2 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.000000000000000000000000000000000000000000000000000000000000000566 234.0
YYD3_k127_3159987_0 phosphoesterase RecJ domain protein K06881 GO:0008150,GO:0040007 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001984 282.0
YYD3_k127_3159987_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000002469 129.0
YYD3_k127_3159987_2 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000006373 132.0
YYD3_k127_3164352_0 Response regulator, receiver K01007 - 2.7.9.2 2.821e-294 914.0
YYD3_k127_3164352_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00260,K00261,K00262 GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.2,1.4.1.3,1.4.1.4 1.569e-204 642.0
YYD3_k127_3164352_2 - - - - 0.0000000000004933 70.0
YYD3_k127_3164524_0 [glutamate-ammonia-ligase] adenylyltransferase activity K00982 GO:0000166,GO:0000287,GO:0000820,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006521,GO:0006541,GO:0006542,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008882,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0010565,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0019222,GO:0019752,GO:0030554,GO:0031323,GO:0032553,GO:0032555,GO:0032559,GO:0033238,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0070566,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.42,2.7.7.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 333.0
YYD3_k127_3164524_1 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002926 236.0
YYD3_k127_3164524_2 Ethyl tert-butyl ether degradation - - - 0.0000000000000000000000000001331 121.0
YYD3_k127_3166530_0 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001715 253.0
YYD3_k127_3196023_0 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000715 406.0
YYD3_k127_3196023_1 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006028 285.0
YYD3_k127_3221344_0 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines K01476,K01480 GO:0003674,GO:0003824,GO:0004053,GO:0006082,GO:0006520,GO:0006525,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 3.5.3.1,3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 374.0
YYD3_k127_3221344_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000005849 255.0
YYD3_k127_3221344_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000003102 143.0
YYD3_k127_3231583_0 serine-type peptidase activity K01278 - 3.4.14.5 1.229e-202 656.0
YYD3_k127_3231583_1 TIGRFAM aminoacyl-histidine dipeptidase K01270 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 569.0
YYD3_k127_3231583_2 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006644 276.0
YYD3_k127_3243592_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138,K18307 - - 0.0 1178.0
YYD3_k127_3243592_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 374.0
YYD3_k127_3243592_2 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.0000000000000000000000000000000000000000000000001065 183.0
YYD3_k127_3243592_3 Outer membrane efflux protein K12340 - - 0.00000000000000000001289 106.0
YYD3_k127_3243592_4 - - - - 0.00000000000000004328 85.0
YYD3_k127_3243592_5 Anti-sigma-K factor rskA - - - 0.0001343 50.0
YYD3_k127_3260123_0 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007499 293.0
YYD3_k127_3260123_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016469,GO:0030312,GO:0032991,GO:0040007,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045259,GO:0045260,GO:0071944,GO:0098796,GO:0098797 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000002256 251.0
YYD3_k127_3260123_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000002669 147.0
YYD3_k127_3260123_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.00000000000000000000000000000000001744 140.0
YYD3_k127_3260123_4 Peptidase family M23 - - - 0.0000000000000000000000000000000008379 144.0
YYD3_k127_3260123_5 Glycosyl transferases group 1 - - - 0.0000000000000000000000000003894 116.0
YYD3_k127_3260123_6 ATP hydrolysis coupled proton transport K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000002196 99.0
YYD3_k127_3260123_7 Polymer-forming cytoskeletal - - - 0.00000000000000001499 87.0
YYD3_k127_3260343_0 DNA polymerase K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002315 270.0
YYD3_k127_3260343_1 Ferredoxin - - - 0.0000000000000000000000000000000000002953 144.0
YYD3_k127_3260343_2 DinB superfamily - - - 0.0000000000000785 78.0
YYD3_k127_3260343_3 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000005779 57.0
YYD3_k127_3260343_4 - - - - 0.00000098 53.0
YYD3_k127_3268130_0 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K09818 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006383 264.0
YYD3_k127_3268130_1 COG1121 ABC-type Mn Zn transport systems ATPase component K11607,K11710 - - 0.0000000000000000000000000000000003531 138.0
YYD3_k127_3268130_2 phosphate-selective porin O and P - - - 0.00000000000000001227 93.0
YYD3_k127_328180_0 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000000000000000000004431 219.0
YYD3_k127_328180_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000000000000000000000000003274 207.0
YYD3_k127_328180_2 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000001967 92.0
YYD3_k127_3306875_0 formate dehydrogenase (NAD+) activity K00336 - 1.6.5.3 1.732e-234 737.0
YYD3_k127_3306875_1 quinone binding K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005515 422.0
YYD3_k127_3306875_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K02573 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000004651 255.0
YYD3_k127_3306875_3 Transporter associated domain K03699,K06189 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000005408 208.0
YYD3_k127_3306875_4 PFAM Aminotransferase class I and II K00814 - 2.6.1.2 0.0000000000000000000271 91.0
YYD3_k127_3313148_0 UvrD/REP helicase N-terminal domain K16898 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000008274 243.0
YYD3_k127_3314119_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005555 293.0
YYD3_k127_3314119_1 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000002055 213.0
YYD3_k127_331874_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 409.0
YYD3_k127_331874_1 N-acetyl-gamma-glutamyl-phosphate reductase activity K00145,K05829 GO:0003674,GO:0003824,GO:0003942,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 334.0
YYD3_k127_331874_2 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 299.0
YYD3_k127_331874_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003891 271.0
YYD3_k127_331874_4 membrane - - - 0.000000000000000000000000000000000000000000000000000006808 199.0
YYD3_k127_331874_5 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000001557 206.0
YYD3_k127_331874_6 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000003944 178.0
YYD3_k127_331874_7 - - - - 0.000000000000000000000000000000000000000000005297 178.0
YYD3_k127_331874_8 - - - - 0.000000941 56.0
YYD3_k127_3329148_0 glycogen (starch) synthase activity K00703,K00754 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 380.0
YYD3_k127_3329148_1 Glycosyl transferase family 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007517 248.0
YYD3_k127_3329148_2 Methyltransferase domain - - - 0.000000000000000000000000000000005893 138.0
YYD3_k127_3329148_3 Methyltransferase - - - 0.00000000000000000000000000000004271 138.0
YYD3_k127_3329148_4 Glycosyl transferase, family 2 K20534 - - 0.00000000000000000000000003261 110.0
YYD3_k127_3329148_5 spore coat K01790 - 5.1.3.13 0.0000000000001473 78.0
YYD3_k127_3329148_6 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000005458 52.0
YYD3_k127_3331341_0 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000006788 126.0
YYD3_k127_3331341_1 eIF-2B alpha beta delta K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.0000000000000000000000000003151 115.0
YYD3_k127_3331341_2 serine-type endopeptidase activity K04771 - 3.4.21.107 0.00000000000000000001114 98.0
YYD3_k127_3333560_0 antibiotic biosynthetic process K01434,K07116 - 3.5.1.11,3.5.1.97 4.495e-198 644.0
YYD3_k127_3333560_1 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000412 293.0
YYD3_k127_3333560_2 NAD+ binding K12410 GO:0000726,GO:0003674,GO:0003824,GO:0003953,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006303,GO:0006464,GO:0006471,GO:0006476,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0016787,GO:0016798,GO:0016799,GO:0019213,GO:0019538,GO:0030312,GO:0033554,GO:0033558,GO:0034641,GO:0034979,GO:0035601,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070213,GO:0071214,GO:0071478,GO:0071479,GO:0071704,GO:0071944,GO:0090304,GO:0098732,GO:0104004,GO:0140096,GO:1901360,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000009871 245.0
YYD3_k127_3333560_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000006041 234.0
YYD3_k127_3357353_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000002438 252.0
YYD3_k127_3357353_1 PFAM Thioredoxin domain K05838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002655 246.0
YYD3_k127_3357353_2 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000001181 184.0
YYD3_k127_3362243_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 600.0
YYD3_k127_3362243_1 PFAM cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000008325 239.0
YYD3_k127_3362243_2 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.000000000000000002977 89.0
YYD3_k127_3362243_3 Calcineurin-like phosphoesterase - - - 0.00002251 52.0
YYD3_k127_3365128_0 protein targeting K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1307.0
YYD3_k127_3365128_1 Conserved protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 326.0
YYD3_k127_3365128_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008829 302.0
YYD3_k127_3365128_3 spore germination K07790 - - 0.00000000000000000000000000000000000000000000000000000000000004251 229.0
YYD3_k127_3365128_4 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000002803 183.0
YYD3_k127_3365128_5 COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) K07259 - 3.4.16.4 0.00000000000000000000000000007602 129.0
YYD3_k127_3377840_0 Metallopeptidase family M24 K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 403.0
YYD3_k127_3377840_1 oligopeptide transport K03305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000749 307.0
YYD3_k127_3377840_2 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006125 266.0
YYD3_k127_3377840_3 - K01992,K19341 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002987 247.0
YYD3_k127_3377840_5 - - - - 0.000000000000000000000000001202 121.0
YYD3_k127_3392303_0 PFAM Uncharacterised BCR, COG1649 - - - 1.871e-284 895.0
YYD3_k127_3414795_0 undecaprenyl-diphosphatase activity K06153 GO:0006950,GO:0008150,GO:0050896,GO:0051409 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000001625 266.0
YYD3_k127_3414795_1 enterobactin catabolic process K07017 - - 0.000000000000000000000000000002238 131.0
YYD3_k127_3414795_2 Domain of unknown function (DUF4388) - - - 0.00000000000000001663 83.0
YYD3_k127_3414795_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000002772 51.0
YYD3_k127_3419724_0 Alpha-2-Macroglobulin K06894 - - 0.000000000000000000000000000000000000000000000000000009073 207.0
YYD3_k127_3419724_1 stringent starvation protein A K03599 - - 0.000006351 53.0
YYD3_k127_3434337_0 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000135 216.0
YYD3_k127_3434337_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000009841 207.0
YYD3_k127_3434337_2 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K00556,K03218,K03437 - 2.1.1.185,2.1.1.34 0.00000000000000000000000000000000000000000000000000000002701 202.0
YYD3_k127_3434337_3 PFAM AAA-4 family protein - - - 0.000000000000000000000004459 107.0
YYD3_k127_3434970_0 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000003136 215.0
YYD3_k127_3434970_1 SdiA-regulated - - - 0.0000000000000000000000000000000000000000000000000003555 193.0
YYD3_k127_3434970_2 TIGRFAM phosphohistidine phosphatase SixA K08296 - - 0.000000000000000000000000005383 120.0
YYD3_k127_3434970_3 CHAD domain - - - 0.00000000000000000009103 100.0
YYD3_k127_3440926_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004505 440.0
YYD3_k127_3440926_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 398.0
YYD3_k127_344560_0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00262 - 1.4.1.4 1.549e-252 783.0
YYD3_k127_344560_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 5.533e-212 667.0
YYD3_k127_344560_2 Response regulator, receiver K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 366.0
YYD3_k127_344560_3 - - - - 0.000000000000000000000000000000000001066 143.0
YYD3_k127_344560_4 Glycine cleavage H-protein - - - 0.00000000000000000000000000001051 126.0
YYD3_k127_344560_5 Glycine cleavage H-protein - - - 0.00000002815 59.0
YYD3_k127_3455012_0 Alpha-2-Macroglobulin K06894 - - 4.87e-230 742.0
YYD3_k127_3459089_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 576.0
YYD3_k127_3459089_1 [acyl-carrier-protein] S-malonyltransferase activity K00645,K15327,K15329,K15355,K15469 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004667 386.0
YYD3_k127_3459089_2 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003954 290.0
YYD3_k127_3459089_3 metal cluster binding - - - 0.000000000000000000000000000000000000151 149.0
YYD3_k127_3459089_4 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000000000000003428 124.0
YYD3_k127_3459089_5 ribonuclease III activity K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000007776 110.0
YYD3_k127_3459089_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000001146 74.0
YYD3_k127_346010_0 IMP dehydrogenase activity K00088 GO:0003674,GO:0003824,GO:0003938,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205 4.977e-223 702.0
YYD3_k127_346010_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 328.0
YYD3_k127_346010_2 COG0006 Xaa-Pro aminopeptidase K01262,K01271 - 3.4.11.9,3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 310.0
YYD3_k127_346010_3 acyl-CoA dehydrogenase activity K00252 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 1.3.8.6 0.000000000001095 67.0
YYD3_k127_3472441_0 GTPase activity K03596 - - 1.245e-292 909.0
YYD3_k127_3472441_1 signal peptide processing K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000003738 226.0
YYD3_k127_3494994_0 cyclic 2,3-diphosphoglycerate synthetase activity K05716 - - 4.329e-200 632.0
YYD3_k127_3494994_1 Amino acid kinase family K00926 - 2.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 340.0
YYD3_k127_3494994_2 - - - - 0.00000000000000000000000000004809 122.0
YYD3_k127_3494994_3 - - - - 0.000000000000000000001251 96.0
YYD3_k127_3506827_0 amino acid activation for nonribosomal peptide biosynthetic process K03651 - 3.1.4.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006298 606.0
YYD3_k127_3506827_1 Fe-S oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 587.0
YYD3_k127_3506827_2 isomerase activity K06998 - 5.3.3.17 0.000000000000000000000000000000000000000000000000000000000000000000003968 244.0
YYD3_k127_3506827_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000002261 162.0
YYD3_k127_3506827_4 SnoaL-like domain - - - 0.0000000000000000000000000000000004411 136.0
YYD3_k127_3506827_5 Domain of unknown function (DUF4203) - - - 0.000000000000000000000000000695 119.0
YYD3_k127_3511454_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K14441 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016782,GO:0018193,GO:0018197,GO:0018198,GO:0018339,GO:0019538,GO:0035596,GO:0035599,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050497,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901564 2.8.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004968 509.0
YYD3_k127_3511454_1 phosphatidate cytidylyltransferase activity K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000006713 227.0
YYD3_k127_3511454_2 - - - - 0.0000000000000002433 85.0
YYD3_k127_3516846_0 Catalyzes the formation of phosphoenolpyruvate from pyruvate K00873 GO:0001871,GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006116,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0030246,GO:0030247,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:2001065 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 448.0
YYD3_k127_3516846_1 Sir2 family K12410 - - 0.00000004596 56.0
YYD3_k127_3519900_0 aconitate hydratase K01681 - 4.2.1.3 1.117e-239 751.0
YYD3_k127_3519900_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 1.454e-210 664.0
YYD3_k127_3519900_2 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0050896,GO:0051087 - 0.000000000000000000002284 99.0
YYD3_k127_352257_0 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007712 284.0
YYD3_k127_352257_1 PFAM DsrE DsrF-like family K09004 - - 0.000000000000000000000000000000000000003815 150.0
YYD3_k127_352257_2 Methyltransferase domain - - - 0.0000000000000003083 81.0
YYD3_k127_352257_3 ACT domain - - - 0.000000000417 65.0
YYD3_k127_352257_4 PFAM conserved - - - 0.000003644 54.0
YYD3_k127_3525841_0 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001419 284.0
YYD3_k127_3525841_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000006065 222.0
YYD3_k127_3525841_2 Belongs to the peptidase M48B family K03799 - - 0.000000000000001645 78.0
YYD3_k127_3544363_0 ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000003899 242.0
YYD3_k127_3544363_1 lipopolysaccharide binding K09774 - - 0.000000000000000000000000004903 119.0
YYD3_k127_3544363_2 OstA-like protein - - - 0.000000000000000722 86.0
YYD3_k127_3544363_3 lipopolysaccharide transmembrane transporter activity K09774,K11719 - - 0.00000003844 55.0
YYD3_k127_3560536_0 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 451.0
YYD3_k127_3560536_1 Belongs to the helicase family. UvrD subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008382 297.0
YYD3_k127_3572216_0 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000000000001012 211.0
YYD3_k127_3579605_0 Belongs to the carbamoyltransferase HypF family K04656 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 354.0
YYD3_k127_3579605_1 TIGRFAM sodium ion-translocating decarboxylase, beta subunit K01572 - 4.1.1.3 0.000000000000000000000000000000000000000000000000000000000001841 212.0
YYD3_k127_3606577_0 cAMP biosynthetic process K18672 GO:0003674,GO:0003824,GO:0004016,GO:0009975,GO:0016829,GO:0016849 2.7.7.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 308.0
YYD3_k127_3606577_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 GO:0003674,GO:0003824,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008086 296.0
YYD3_k127_3606577_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0030091,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000471 234.0
YYD3_k127_3606577_3 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.0000000000000000000000000000004474 128.0
YYD3_k127_3621591_0 beta-lactamase K17836 - 3.5.2.6 0.000000000000000000000000000000000000000000000000006945 198.0
YYD3_k127_3621966_0 arginyl-tRNA aminoacylation K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002393 285.0
YYD3_k127_3621966_1 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000309 150.0
YYD3_k127_3621966_2 TRANSCRIPTIONal - - - 0.000000000000000000000000000000002471 138.0
YYD3_k127_3621966_3 - - - - 0.000000000000000000000008698 107.0
YYD3_k127_3621966_4 Nucleotidyl transferase K11528 - 2.7.7.23 0.00000000003237 64.0
YYD3_k127_3623481_0 response regulator receiver K07714,K10943 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009646 400.0
YYD3_k127_3623481_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000008637 167.0
YYD3_k127_3623481_2 GAF domain - - - 0.0000000000000000000000000002289 123.0
YYD3_k127_3623481_3 Sigma-54 interaction domain - - - 0.00000000000008173 79.0
YYD3_k127_3623481_4 Polysaccharide lyase family 4, domain II - - - 0.00007865 48.0
YYD3_k127_363749_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 425.0
YYD3_k127_363749_1 Coproporphyrinogen III oxidase K00228 - 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004646 364.0
YYD3_k127_363749_2 ferrochelatase activity K01772 GO:0003674,GO:0003824,GO:0004325,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009314,GO:0009416,GO:0009628,GO:0009987,GO:0016020,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0040007,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0050896,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051540,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 316.0
YYD3_k127_363749_3 protoporphyrinogen oxidase activity K00231,K14266 - 1.14.19.9,1.3.3.15,1.3.3.4 0.0000000000000000000000000000000000000000006578 165.0
YYD3_k127_365249_0 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000004797 113.0
YYD3_k127_365249_1 DNA recombination K03546,K03631 - - 0.000000000000000000000002382 117.0
YYD3_k127_365249_2 - - - - 0.00000000000000000000001465 108.0
YYD3_k127_365249_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000001658 68.0
YYD3_k127_3667195_0 Negative regulator of - - - 0.0000000000000000000000000000000000000000000000000000000000009467 230.0
YYD3_k127_3667195_1 Belongs to the peptidase S8 family - - - 0.0000000000000000000000001207 109.0
YYD3_k127_3701370_0 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K00082,K11752 GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0016070,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 299.0
YYD3_k127_3701370_1 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000001862 200.0
YYD3_k127_3701370_2 Lumazine binding domain K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000008589 199.0
YYD3_k127_3701370_3 Belongs to the GcvT family K00605,K06980 - 2.1.2.10 0.0000000000000000000000000000000002432 145.0
YYD3_k127_3701370_5 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.000000000000000000000141 102.0
YYD3_k127_3703155_0 PFAM Methionine sulfoxide reductase B K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000002263 254.0
YYD3_k127_3703155_1 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000412 218.0
YYD3_k127_3703155_2 cAMP biosynthetic process K01768,K02483 - 4.6.1.1 0.00000000007885 66.0
YYD3_k127_3708234_0 Ketoacyl-synthetase C-terminal extension - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 543.0
YYD3_k127_3712472_0 TonB-dependent receptor - - - 5.084e-224 721.0
YYD3_k127_3712472_1 Belongs to the peptidase S8 family K06113,K12685 - 3.2.1.99 1.477e-203 657.0
YYD3_k127_3712472_2 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005139 331.0
YYD3_k127_3712472_3 long-chain fatty acid transporting porin activity K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 332.0
YYD3_k127_3712472_4 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000001878 244.0
YYD3_k127_3719277_0 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000553 272.0
YYD3_k127_3719277_1 calcium- and calmodulin-responsive adenylate cyclase activity K01179 - 3.2.1.4 0.000000000000000000000006742 103.0
YYD3_k127_3719277_2 exo-alpha-(2->6)-sialidase activity - - - 0.000003496 57.0
YYD3_k127_3726899_0 tryptophan 2,3-dioxygenase activity K00453,K03392 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11,4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 450.0
YYD3_k127_3726899_1 Belongs to the aldehyde dehydrogenase family K00128,K10217 - 1.2.1.3,1.2.1.32,1.2.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 368.0
YYD3_k127_3726899_2 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 293.0
YYD3_k127_3729084_0 ATP-dependent peptidase activity K01338 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004175,GO:0004176,GO:0004252,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006515,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009266,GO:0009314,GO:0009408,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017171,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051603,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 3.4.21.53 9.661e-207 650.0
YYD3_k127_3729084_1 Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 457.0
YYD3_k127_3729084_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 424.0
YYD3_k127_374828_0 translation release factor activity K02836 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005737 490.0
YYD3_k127_374828_1 lipoprotein localization to outer membrane K09808,K09815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009333 319.0
YYD3_k127_374828_2 lipoprotein localization to outer membrane K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007513 287.0
YYD3_k127_374828_3 - - - - 0.00000000000000000000000000000000000000001251 155.0
YYD3_k127_374828_4 4-Hydroxyphenylpyruvate dioxygenase - - - 0.00000000000000000000000000000000000000002997 153.0
YYD3_k127_375296_0 ATPase activity K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 388.0
YYD3_k127_375296_1 transport, permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003215 306.0
YYD3_k127_3761069_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 442.0
YYD3_k127_3761069_1 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 445.0
YYD3_k127_3761069_2 unfolded protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003951 263.0
YYD3_k127_3761069_3 Pfam:DUF59 K02612 - - 0.0000000000000000000000000000009574 124.0
YYD3_k127_3761069_4 PFAM FMN-binding domain protein - - - 0.00000000000000000002602 100.0
YYD3_k127_3761069_5 - - - - 0.0000000000000000004632 95.0
YYD3_k127_3761069_6 domain protein - - - 0.00002779 55.0
YYD3_k127_3774233_0 - - - - 0.0000000000000000000000000000000000000000000000004224 187.0
YYD3_k127_3776922_0 translation release factor activity K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 464.0
YYD3_k127_3776922_1 Protein of unknown function (DUF1385) K09153 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 296.0
YYD3_k127_3776922_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01485,K11991 GO:0002097,GO:0002100,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 3.5.4.1,3.5.4.33 0.000000000000000000000000000000000000000000000000000000805 198.0
YYD3_k127_3776922_3 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000001528 125.0
YYD3_k127_3791270_0 ATPase associated with various cellular activities, AAA_5 K03696 - - 6.241e-195 616.0
YYD3_k127_3791270_1 Sigma54 specific transcriptional regulator, Fis family K21405 - - 0.000003728 54.0
YYD3_k127_3794838_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000009289 166.0
YYD3_k127_3794838_1 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 - - 0.0000000000000000000000000000000000003209 149.0
YYD3_k127_3794838_2 holo-[acyl-carrier-protein] synthase activity K00950,K00997,K01207,K01775,K06133,K06925,K18014 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008897,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0018070,GO:0018193,GO:0018209,GO:0018215,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 2.7.6.3,2.7.8.7,3.2.1.52,4.3.1.14,5.1.1.1 0.000000000000000000000000000001388 127.0
YYD3_k127_3795682_0 Belongs to the glycosyl hydrolase 43 family - - - 8.198e-278 865.0
YYD3_k127_3795682_1 cellulose binding - - - 0.0000000000000000000000000000004066 142.0
YYD3_k127_3795682_2 histidine kinase, dimerisation and phosphoacceptor region - - - 0.00000000000001539 78.0
YYD3_k127_3795682_3 Belongs to the peptidase S8 family K20276 - - 0.000000000002205 81.0
YYD3_k127_3795682_4 - - - - 0.00000052 57.0
YYD3_k127_3799851_0 Aldehyde dehydrogenase family K00140,K22187 - 1.2.1.18,1.2.1.27 1.405e-225 708.0
YYD3_k127_3799851_1 PFAM Permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 7.861e-196 621.0
YYD3_k127_3799851_2 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001034 284.0
YYD3_k127_3799851_3 PFAM CMP dCMP deaminase zinc-binding K01485 - 3.5.4.1 0.00000000000000000000000000000000000000000000000000000000000000007615 225.0
YYD3_k127_3799851_5 transferase activity, transferring glycosyl groups - - - 0.000000000000001163 77.0
YYD3_k127_3802645_0 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009963 372.0
YYD3_k127_3802645_1 Glycosyl transferase, family 9 K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009295 266.0
YYD3_k127_3802645_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000007891 253.0
YYD3_k127_3802645_3 Kdo2-lipid A biosynthetic process K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000005648 192.0
YYD3_k127_3802645_4 Telomere recombination K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000002238 172.0
YYD3_k127_3802645_5 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000006157 127.0
YYD3_k127_3802645_6 iron ion homeostasis K02012 - - 0.0000000000001431 74.0
YYD3_k127_3825368_0 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 7.288e-314 977.0
YYD3_k127_3829852_0 Transferase K02527,K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33,2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 412.0
YYD3_k127_3829852_1 Protein of unknown function DUF111 K06898,K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000006843 162.0
YYD3_k127_3829852_2 PFAM glycosyl transferase family 9 K02843 - - 0.000000000000000000000000000000000000000002703 164.0
YYD3_k127_3834360_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 8.927e-209 661.0
YYD3_k127_3834360_1 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000001077 214.0
YYD3_k127_3834360_2 Tetratricopeptide repeat - - - 0.000000000000000000000002425 109.0
YYD3_k127_3834360_3 - - - - 0.0009222 42.0
YYD3_k127_3845929_0 Belongs to the helicase family. UvrD subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000001507 236.0
YYD3_k127_3845929_1 chlorophyll binding - - - 0.000000000000000000000000000000000000000000000007179 192.0
YYD3_k127_3845929_2 Asparaginase, N-terminal K01424 - 3.5.1.1 0.0000001426 52.0
YYD3_k127_3854061_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 7.963e-202 648.0
YYD3_k127_3854061_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 405.0
YYD3_k127_3854061_2 Bacterial phospho-glucose isomerase C-terminal SIS domain K15916 - 5.3.1.8,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008815 323.0
YYD3_k127_3854061_3 Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides - - - 0.0000000000000000000000000000005066 125.0
YYD3_k127_3857038_0 ABC transporter K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 493.0
YYD3_k127_3861591_0 NAD binding K00333,K13378 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007385 430.0
YYD3_k127_3861591_1 quinone binding K00337,K05572 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0044237,GO:0045333,GO:0050136,GO:0055114 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 417.0
YYD3_k127_3861591_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K03615,K05580 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000284 246.0
YYD3_k127_3861591_3 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000009445 119.0
YYD3_k127_386763_0 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 383.0
YYD3_k127_386763_1 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008435 328.0
YYD3_k127_386763_2 Alpha-2-Macroglobulin K06894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002011 289.0
YYD3_k127_386763_3 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000007263 184.0
YYD3_k127_386763_4 Spermine/spermidine synthase domain - - - 0.0000000000000000000000000000000000001649 144.0
YYD3_k127_386763_5 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 0.0000002636 57.0
YYD3_k127_3868131_0 Belongs to the glycosyl hydrolase 28 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003529 586.0
YYD3_k127_3868131_1 unsaturated chondroitin disaccharide hydrolase activity K15532 - 3.2.1.172 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004048 466.0
YYD3_k127_3868131_2 Pectate lyase K01728 - 4.2.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 442.0
YYD3_k127_3868131_3 Domain of unknown function - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 392.0
YYD3_k127_3868131_4 purine nucleotide biosynthetic process K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 359.0
YYD3_k127_3868131_5 pectinesterase activity K01051,K10297 - 3.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003802 289.0
YYD3_k127_3868131_6 Glycosyl hydrolase-like 10 - - - 0.000000000000000000001998 109.0
YYD3_k127_3879577_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 3.176e-198 630.0
YYD3_k127_3879577_1 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006559 349.0
YYD3_k127_3879577_2 - - - - 0.000000000000000000000000000000000000000000000000000000000003819 222.0
YYD3_k127_3879577_3 PFAM Conserved TM helix - - - 0.000000000000000000000000000000000000000000000000000000001005 209.0
YYD3_k127_3879577_4 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000001869 184.0
YYD3_k127_3879577_5 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000007707 168.0
YYD3_k127_3879577_6 peroxiredoxin activity K03564,K07638 - 1.11.1.15,2.7.13.3 0.00000000000000000000000000000000000000000004068 168.0
YYD3_k127_3879577_7 metabolite transporter - - - 0.00000000000000000000000000001603 130.0
YYD3_k127_3879577_8 Cupin domain - - - 0.000000007852 57.0
YYD3_k127_3879577_9 radical SAM domain protein - - - 0.000005658 49.0
YYD3_k127_388802_0 Phosphotransferase system, EIIC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 368.0
YYD3_k127_388802_1 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 325.0
YYD3_k127_388802_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138,K18307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003489 293.0
YYD3_k127_388802_3 - - - - 0.00000000000000000000000000000000000000000005414 165.0
YYD3_k127_3916769_0 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000000007432 205.0
YYD3_k127_3916769_1 - - - - 0.0000000000000000001784 96.0
YYD3_k127_3932261_0 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 346.0
YYD3_k127_3932261_1 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000009551 214.0
YYD3_k127_3932261_2 FlgD Ig-like domain - - - 0.0000000000000000009516 102.0
YYD3_k127_393264_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 GO:0008150,GO:0040007 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000762 529.0
YYD3_k127_393264_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009828 471.0
YYD3_k127_393264_10 O-Antigen ligase K02847 - - 0.00002411 57.0
YYD3_k127_393264_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K03286 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005232 361.0
YYD3_k127_393264_3 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 327.0
YYD3_k127_393264_4 phosphatidylethanolamine metabolic process K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000002787 222.0
YYD3_k127_393264_5 phosphatidylcholine synthase activity K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000009651 221.0
YYD3_k127_393264_6 PFAM SAICAR synthetase K01756,K01923 - 4.3.2.2,6.3.2.6 0.00000000000000000000000000000000000001129 154.0
YYD3_k127_393264_7 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01923,K01952 - 6.3.2.6,6.3.5.3 0.000000000000000000006776 95.0
YYD3_k127_393264_8 protein secretion K03116,K03117 - - 0.00000000000000005817 81.0
YYD3_k127_393264_9 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000001252 69.0
YYD3_k127_3938075_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.707e-267 843.0
YYD3_k127_3938075_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K13810 - 2.2.1.2,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 339.0
YYD3_k127_3938075_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006799 250.0
YYD3_k127_3938075_3 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000132 198.0
YYD3_k127_3938075_4 PFAM Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000003472 183.0
YYD3_k127_3938075_5 Cytochrome C oxidase, cbb3-type, subunit III K19713 - 1.8.2.2 0.00000000000000000000000000000000000000000000001098 186.0
YYD3_k127_3948921_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 582.0
YYD3_k127_3948921_1 NAD binding K00333,K13378 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006747 557.0
YYD3_k127_3948921_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000001909 267.0
YYD3_k127_3948921_3 Amp-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000001328 233.0
YYD3_k127_3948921_4 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000000002142 188.0
YYD3_k127_3948921_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000001267 184.0
YYD3_k127_3948921_6 2 iron, 2 sulfur cluster binding K00334,K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000006989 164.0
YYD3_k127_3948921_7 AI-2E family transporter - - - 0.0000000000000000000000000000000000001899 156.0
YYD3_k127_3948921_8 rRNA processing K07056 - 2.1.1.198 0.00000000000000000000001202 102.0
YYD3_k127_3960224_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 3.292e-276 883.0
YYD3_k127_3960224_1 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000000000000000000000145 205.0
YYD3_k127_3960224_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000002365 59.0
YYD3_k127_3965093_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 363.0
YYD3_k127_3972364_0 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 362.0
YYD3_k127_3972364_1 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 291.0
YYD3_k127_3972364_2 - - - - 0.0000000000103 71.0
YYD3_k127_3985045_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0030312,GO:0044237,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 327.0
YYD3_k127_3985045_1 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000001747 241.0
YYD3_k127_3985045_2 gas vesicle protein - - - 0.0000000000000000000000000000005989 126.0
YYD3_k127_3985045_3 regulation of translation K03530,K05788 - - 0.000000000000000000000000000001048 124.0
YYD3_k127_3985045_4 peptidyl-tyrosine sulfation - - - 0.00000000000000000000001007 111.0
YYD3_k127_3985045_5 - - - - 0.00002177 48.0
YYD3_k127_3992991_0 GatB/GatE catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005054 498.0
YYD3_k127_3992991_1 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 452.0
YYD3_k127_3994963_0 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008661 617.0
YYD3_k127_3994963_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 440.0
YYD3_k127_3994963_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 431.0
YYD3_k127_3994963_3 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002581 276.0
YYD3_k127_3994963_4 dTDP biosynthetic process K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.000000000000000000000000000000000000000000000000008381 196.0
YYD3_k127_3994963_5 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000005466 177.0
YYD3_k127_3994963_6 histidine-tRNA ligase activity K01892,K02502 - 6.1.1.21 0.0000000000000000000000000000000000000007348 156.0
YYD3_k127_3998212_0 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 426.0
YYD3_k127_3998212_1 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000318 186.0
YYD3_k127_3998212_2 - - - - 0.0000000000000000000000000000003014 128.0
YYD3_k127_3998212_3 Leukotriene A4 hydrolase, C-terminal - - - 0.000001487 57.0
YYD3_k127_4024515_0 DNA topoisomerase II activity K02469 - 5.99.1.3 0.0 1179.0
YYD3_k127_4024515_1 DNA topoisomerase II activity K02470 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009330,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140097,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 310.0
YYD3_k127_4026128_0 glucose phosphotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001394 282.0
YYD3_k127_4026128_1 bacteriocin transport K03561 - - 0.0000000000000000000000000000000000000000001704 163.0
YYD3_k127_4026128_2 biopolymer transport protein K03559 - - 0.0000000000000000000000371 104.0
YYD3_k127_4026128_3 energy transducer activity K03832,K09992 - - 0.0000000000000001719 89.0
YYD3_k127_4033349_0 PFAM L-fucose isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 424.0
YYD3_k127_4033349_1 FGGY family of carbohydrate kinases, N-terminal domain K00853 - 2.7.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 327.0
YYD3_k127_4034596_0 Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH K22136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000547 351.0
YYD3_k127_4034596_1 Rieske [2Fe-2S] domain K02636,K03886 - 1.10.9.1 0.0000000000000000000000000000000000000000000000000000000001027 213.0
YYD3_k127_4036148_0 cellulose binding - - - 0.00000000000000000000000000000000001647 156.0
YYD3_k127_4036148_1 s cog3422 K09946 GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.000000000000000000000000000000739 126.0
YYD3_k127_4036692_0 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000298 203.0
YYD3_k127_4036692_1 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000006843 169.0
YYD3_k127_4036692_2 peptidase S9 prolyl oligopeptidase active site K01278 - 3.4.14.5 0.00000000000000000000000000000005068 133.0
YYD3_k127_4036692_3 Outer membrane protein beta-barrel domain - - - 0.0000001368 61.0
YYD3_k127_4050491_0 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000001033 260.0
YYD3_k127_4050491_1 CAAX protease self-immunity - - - 0.00000000000000000000001449 111.0
YYD3_k127_4057825_0 Belongs to the peptidase S8 family K13276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 361.0
YYD3_k127_4057825_1 Bacterial type II secretion system K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002769 252.0
YYD3_k127_4057825_2 - - - - 0.0000000000000000000000000002481 130.0
YYD3_k127_4057825_3 - - - - 0.000000000000000001117 96.0
YYD3_k127_4057825_4 Domain of unknown function (DUF4177) - - - 0.00000000000007494 74.0
YYD3_k127_4059205_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 1.359e-219 689.0
YYD3_k127_4059205_1 response to oxidative stress K04063 - - 0.0000007588 51.0
YYD3_k127_4060736_0 Non-ribosomal peptide synthetase modules and related - - - 4.937e-261 826.0
YYD3_k127_4060736_1 Amino acid adenylation domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 439.0
YYD3_k127_4063044_0 ATP synthesis coupled electron transport K00343 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 396.0
YYD3_k127_4063044_1 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000001022 267.0
YYD3_k127_4063044_2 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000001343 192.0
YYD3_k127_4063044_3 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000000000001146 181.0
YYD3_k127_4063253_0 Copper binding periplasmic protein CusF K07152 - - 0.0000000000000000000000000000000000000000000000000000004994 203.0
YYD3_k127_4063253_1 EVE domain - - - 0.0000000000000000000000000000000000000000000003213 173.0
YYD3_k127_4063253_2 CBS domain containing protein - - - 0.0000000000000000008079 87.0
YYD3_k127_4068860_0 1-deoxy-D-xylulose-5-phosphate synthase activity K01662 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006725,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008614,GO:0008615,GO:0008654,GO:0008661,GO:0009058,GO:0009108,GO:0009110,GO:0009228,GO:0009240,GO:0009987,GO:0016740,GO:0016744,GO:0017144,GO:0018130,GO:0019288,GO:0019438,GO:0019637,GO:0019682,GO:0019752,GO:0019842,GO:0030145,GO:0030975,GO:0030976,GO:0032787,GO:0034641,GO:0036094,GO:0040007,GO:0042180,GO:0042181,GO:0042364,GO:0042723,GO:0042724,GO:0042816,GO:0042819,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:1901135,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1901661,GO:1901663,GO:1901681 2.2.1.7 6.334e-275 859.0
YYD3_k127_4068860_1 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 609.0
YYD3_k127_4068860_2 exodeoxyribonuclease VII activity K03601,K03797 - 3.1.11.6,3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 389.0
YYD3_k127_4068860_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000001305 70.0
YYD3_k127_4068860_4 alpha-galactosidase K07407 - 3.2.1.22 0.00000000007846 64.0
YYD3_k127_4097803_0 Cytochrome C oxidase subunit II, periplasmic domain K00376 - 1.7.2.4 5.061e-301 933.0
YYD3_k127_4097803_1 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009174 473.0
YYD3_k127_4097803_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007921 311.0
YYD3_k127_4097803_3 Periplasmic copper-binding protein (NosD) K07218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005187 323.0
YYD3_k127_4097803_4 lipoprotein involved in nitrous oxide reduction - - - 0.0000000000000000000000000000000000000000000000000000000000000001529 229.0
YYD3_k127_4097803_5 ABC transporter K01990,K19340 - - 0.00000000000000000000000000000000000000000000000000003945 200.0
YYD3_k127_4097803_6 ABC-2 family transporter protein K01992,K19341 - - 0.00000000000000000000000000000000000001068 152.0
YYD3_k127_4097803_7 NosL K19342 - - 0.0000000000000000000001867 102.0
YYD3_k127_4101826_0 ribonuclease E activity K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005203 567.0
YYD3_k127_4101826_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004613 459.0
YYD3_k127_4101826_2 2-phosphosulfolactate phosphatase activity K05979 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 3.1.3.71 0.00000000000000000001799 94.0
YYD3_k127_4101826_3 regulation of RNA biosynthetic process K03705 GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000002986 50.0
YYD3_k127_4119113_0 ABC transporter - - - 1.262e-286 889.0
YYD3_k127_4119113_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 477.0
YYD3_k127_4119113_2 Methionine synthase K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0032259,GO:0042084,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004157 423.0
YYD3_k127_4119113_3 cell redox homeostasis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007144 252.0
YYD3_k127_4119113_4 COG1405 Transcription initiation factor TFIIIB, Brf1 subunit Transcription initiation factor TFIIB - - - 0.000002384 55.0
YYD3_k127_4122030_0 curli production assembly transport component CsgG K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000244 250.0
YYD3_k127_4122030_1 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000128 240.0
YYD3_k127_4122030_2 Protein tyrosine kinase K08884,K12132 - 2.7.11.1 0.0000000000000000007257 98.0
YYD3_k127_4136644_0 transferase activity, transferring glycosyl groups K00754 GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000459 518.0
YYD3_k127_4136644_1 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000001906 133.0
YYD3_k127_4136644_2 AraC-like ligand binding domain - - - 0.0000000000001879 75.0
YYD3_k127_4136644_3 - - - - 0.00000000002657 69.0
YYD3_k127_4136644_4 YigZ family - - - 0.0000001315 56.0
YYD3_k127_4136644_5 beta-galactosidase activity K01190,K01195 - 3.2.1.23,3.2.1.31 0.000000236 52.0
YYD3_k127_4136644_6 Putative zinc-finger - - - 0.00004539 53.0
YYD3_k127_4155608_0 CTP:tRNA cytidylyltransferase activity K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 599.0
YYD3_k127_4155608_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 395.0
YYD3_k127_4155608_2 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005662 393.0
YYD3_k127_4155608_3 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 389.0
YYD3_k127_4155608_4 inositol 2-dehydrogenase activity K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005792 366.0
YYD3_k127_4155608_5 lipoprotein transporter activity K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 346.0
YYD3_k127_4155608_6 efflux transmembrane transporter activity K12340 - - 0.000000000000000000000000000000000000000000000000000000000001194 226.0
YYD3_k127_4167001_0 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000001897 217.0
YYD3_k127_4167001_1 - - - - 0.000000000000000000000000000000000000000000000000000000169 208.0
YYD3_k127_4183528_0 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 403.0
YYD3_k127_4183528_1 Oxaloacetate decarboxylase, alpha subunit K01571,K01960 - 4.1.1.3,6.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 403.0
YYD3_k127_4183528_2 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000001432 81.0
YYD3_k127_4184543_0 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000005336 262.0
YYD3_k127_4184543_1 SnoaL-like domain - - - 0.0000000000000000000000001516 111.0
YYD3_k127_4184543_2 Squalene/phytoene synthase - - - 0.0000000000005268 71.0
YYD3_k127_4191391_0 Participates in initiation and elongation during chromosome replication - - - 2.065e-223 719.0
YYD3_k127_4191391_1 heme binding K21471 - - 0.00000000000003201 76.0
YYD3_k127_4193843_0 urocanate hydratase activity K01712 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006547,GO:0006548,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009987,GO:0016054,GO:0016153,GO:0016829,GO:0016835,GO:0016836,GO:0019439,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046395,GO:0046483,GO:0046700,GO:0052803,GO:0052805,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 4.2.1.49 3.329e-288 892.0
YYD3_k127_4193843_1 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 408.0
YYD3_k127_4193843_2 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000000009195 154.0
YYD3_k127_4193843_3 phosphoserine phosphatase activity K01768,K07315 - 3.1.3.3,4.6.1.1 0.0000000000000000000000000000000001893 147.0
YYD3_k127_4193843_4 endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000001089 126.0
YYD3_k127_4193843_5 PFAM aminotransferase class V - - - 0.000000000000000000007513 96.0
YYD3_k127_4193843_6 enzyme related to lactoylglutathione lyase K06996 - - 0.0000000006333 65.0
YYD3_k127_4193843_7 - - - - 0.000000114 55.0
YYD3_k127_4207814_0 CobQ CobB MinD ParA nucleotide binding domain K16554,K16692 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008434 556.0
YYD3_k127_4207814_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 0.00000008698 55.0
YYD3_k127_4207814_2 TIGRFAM polysaccharide export protein EpsE K01991 - - 0.00003131 54.0
YYD3_k127_4208856_0 peptidyl-prolyl cis-trans isomerase activity K01802,K03769,K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000007222 215.0
YYD3_k127_4208856_1 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.000000000000000000000000000000000000000000000002729 180.0
YYD3_k127_4208856_2 Methyltransferase type 12 - - - 0.00000000000000000000000000000000000000001547 162.0
YYD3_k127_4208856_3 - - - - 0.0000000000000000000005736 105.0
YYD3_k127_4208856_4 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000006558 88.0
YYD3_k127_4210717_0 ATP-dependent DNA helicase activity K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 5.307e-209 675.0
YYD3_k127_4210717_1 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 438.0
YYD3_k127_4210717_2 Catalyzes the sodium-dependent transport of glutamate - - - 0.0000000000000000000000000001798 117.0
YYD3_k127_4210717_3 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000002651 66.0
YYD3_k127_4222779_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 516.0
YYD3_k127_4222779_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002966 460.0
YYD3_k127_4222779_2 - - - - 0.0000000000000000000000002212 119.0
YYD3_k127_4222779_3 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000009447 96.0
YYD3_k127_422661_0 phosphoglucosamine mutase activity K01840,K03431,K15778 - 5.4.2.10,5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007978 460.0
YYD3_k127_422661_1 DNA mediated transformation K02342,K03168,K03703,K04096 - 2.7.7.7,5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 380.0
YYD3_k127_422661_2 metal cluster binding - - - 0.000000000000000000000000000000000000000000000001634 179.0
YYD3_k127_422661_3 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.0000000000000000000000000000001091 130.0
YYD3_k127_422661_4 Ethanolamine utilisation protein EutN/carboxysome K04028 - - 0.000000000000000004608 87.0
YYD3_k127_4229076_0 glucuronate isomerase activity K01812 GO:0005975,GO:0005996,GO:0006063,GO:0006064,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0019585,GO:0019586,GO:0019698,GO:0019752,GO:0032787,GO:0042839,GO:0042840,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046396,GO:0046397,GO:0071704,GO:0072329,GO:1901575 5.3.1.12 3.493e-214 675.0
YYD3_k127_4229076_1 tagaturonate epimerase K21619 - 5.1.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 454.0
YYD3_k127_4229076_2 PFAM Short-chain dehydrogenase reductase SDR K00046,K00065 - 1.1.1.127,1.1.1.69 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 325.0
YYD3_k127_4229076_3 Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate K01815 - 5.3.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000093 327.0
YYD3_k127_4229076_4 Domain of unknown function (DUF4861) - - - 0.000000000000000000000000000000000000000000251 174.0
YYD3_k127_4229076_5 Beta-lactamase K01286 - 3.4.16.4 0.0000000007877 64.0
YYD3_k127_4230861_0 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004525 277.0
YYD3_k127_4230861_1 OPT oligopeptide transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007317 251.0
YYD3_k127_4235758_0 arabinose-5-phosphate isomerase activity K01627,K03281,K06041 - 2.5.1.55,5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 368.0
YYD3_k127_4235758_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003966 362.0
YYD3_k127_4235758_2 3-deoxy-8-phosphooctulonate synthase activity K01627 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005996,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008676,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016043,GO:0016051,GO:0016053,GO:0016740,GO:0016765,GO:0019294,GO:0019752,GO:0022607,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046394,GO:0046400,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 338.0
YYD3_k127_4235758_3 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.00000000000000000000000000000000000000006021 158.0
YYD3_k127_4257304_0 Sigma-54 interaction domain K11384 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 497.0
YYD3_k127_4257304_1 histidine kinase HAMP region domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 424.0
YYD3_k127_4257304_10 Tetratricopeptide repeat - - - 0.0000000000000000000000001418 123.0
YYD3_k127_4257304_11 - - - - 0.00000000000001335 84.0
YYD3_k127_4257304_12 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) - - - 0.000002125 55.0
YYD3_k127_4257304_2 CBS domain-containing protein K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008761 310.0
YYD3_k127_4257304_3 aminopeptidase K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003274 284.0
YYD3_k127_4257304_4 PFAM Endonuclease exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003464 249.0
YYD3_k127_4257304_5 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000003268 237.0
YYD3_k127_4257304_6 ABC-type phosphate transport system periplasmic K02040 - - 0.000000000000000000000000000000000000001077 162.0
YYD3_k127_4257304_7 Outer membrane transport energization protein ExbD - - - 0.00000000000000000000000000000000000000134 152.0
YYD3_k127_4257304_8 PFAM Biopolymer transport protein ExbD TolR - - - 0.000000000000000000000000000000000001261 144.0
YYD3_k127_4257304_9 TIGRFAM TonB family protein K03832 - - 0.000000000000000000000000000007001 129.0
YYD3_k127_4263785_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000003011 147.0
YYD3_k127_4263785_1 HEAT repeats - - - 0.000000000000006572 87.0
YYD3_k127_4263785_2 - - - - 0.00004021 52.0
YYD3_k127_4264086_0 Glycoside hydrolase, family 20, catalytic core K12373 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003956 337.0
YYD3_k127_4264086_1 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 0.000000000000000000000000000000000000000000000000000004608 196.0
YYD3_k127_4264086_2 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000001345 80.0
YYD3_k127_426808_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 8.472e-261 831.0
YYD3_k127_426808_1 - - - - 0.0000000000000000000000000000001363 126.0
YYD3_k127_426808_2 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA - - - 0.000000000000000000001395 101.0
YYD3_k127_427913_0 endo-1,4-beta-xylanase activity K21636 - 1.1.98.6 0.000000000000000000000000000000000005336 150.0
YYD3_k127_427913_1 peroxiredoxin activity - - - 0.0000000000000000000000000000000001808 139.0
YYD3_k127_427913_2 cellulase activity K01201 - 3.2.1.45 0.0000000000000000000000141 114.0
YYD3_k127_427913_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00006551 49.0
YYD3_k127_427913_4 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0001884 47.0
YYD3_k127_427913_5 - - - - 0.000208 54.0
YYD3_k127_4285168_0 Calcineurin-like phosphoesterase - - - 0.000002038 60.0
YYD3_k127_429620_0 homocysteine catabolic process K01372,K02316 - 3.4.22.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004012 398.0
YYD3_k127_429620_1 SatD family (SatD) - - - 0.000000000000000000000000000000006116 136.0
YYD3_k127_4309266_0 Outer membrane efflux protein - - - 0.000000000000000000000005804 114.0
YYD3_k127_4309266_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000003903 94.0
YYD3_k127_4312102_0 Protein of unknown function (DUF1015) K00262 - 1.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006639 509.0
YYD3_k127_4312102_1 Aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 505.0
YYD3_k127_4312102_2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 310.0
YYD3_k127_4312102_3 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000008659 171.0
YYD3_k127_4329211_0 Glycosyl transferase family, helical bundle domain K00756,K00758 - 2.4.2.2,2.4.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006273 501.0
YYD3_k127_4329211_1 radical SAM domain protein K04070 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006902 376.0
YYD3_k127_4329211_10 glycolate biosynthetic process K01091 - 3.1.3.18 0.00000000000000000000000000000001343 134.0
YYD3_k127_4329211_11 Ferredoxin - - - 0.00000000000001149 80.0
YYD3_k127_4329211_2 inositol monophosphate 1-phosphatase activity K01082,K01092 GO:0003674,GO:0003824,GO:0005975,GO:0006020,GO:0006066,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008934,GO:0009056,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0019751,GO:0023052,GO:0042578,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0046164,GO:0046174,GO:0046434,GO:0046838,GO:0046855,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052834,GO:0065007,GO:0071545,GO:0071704,GO:1901575,GO:1901615,GO:1901616 3.1.3.25,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001043 281.0
YYD3_k127_4329211_3 cellular water homeostasis K05802,K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001879 257.0
YYD3_k127_4329211_4 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000008808 240.0
YYD3_k127_4329211_5 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000008044 229.0
YYD3_k127_4329211_6 Amylo-alpha-1,6-glucosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000005127 246.0
YYD3_k127_4329211_7 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000001526 182.0
YYD3_k127_4329211_8 nUDIX hydrolase K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000003992 186.0
YYD3_k127_4329211_9 IMP dehydrogenase activity - - - 0.00000000000000000000000000000000001383 141.0
YYD3_k127_4350716_0 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006717 361.0
YYD3_k127_4350716_1 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000002185 188.0
YYD3_k127_4370069_0 Transketolase, pyrimidine binding domain K00167 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 403.0
YYD3_k127_4370069_1 e3 binding domain K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 380.0
YYD3_k127_4370069_2 Dehydrogenase E1 component K00161,K00166,K11381,K21416 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 318.0
YYD3_k127_437064_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002828 541.0
YYD3_k127_437064_1 phosphate starvation-inducible protein PhoH K06217 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 417.0
YYD3_k127_437064_2 TIGRFAM MazG family protein K02428,K02499,K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.66,3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 296.0
YYD3_k127_437064_3 positive regulation of growth rate - - - 0.000000000000000000000000003268 121.0
YYD3_k127_437064_4 alcohol dehydrogenase - - - 0.00000000000000000000008991 99.0
YYD3_k127_4375525_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016469,GO:0030312,GO:0032991,GO:0040007,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045259,GO:0045260,GO:0071944,GO:0098796,GO:0098797 3.6.3.14 2.717e-205 644.0
YYD3_k127_4375525_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 2.369e-195 620.0
YYD3_k127_4375525_10 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000002469 120.0
YYD3_k127_4375525_11 Belongs to the UPF0109 family K06960 - - 0.000000000000000000001925 96.0
YYD3_k127_4375525_12 zeta toxin - - - 0.000005798 51.0
YYD3_k127_4375525_2 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 575.0
YYD3_k127_4375525_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0030312,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0040007,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046907,GO:0048500,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0071944,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1990904 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 541.0
YYD3_k127_4375525_4 proton-transporting ATP synthase activity, rotational mechanism K02115 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 314.0
YYD3_k127_4375525_5 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000621 291.0
YYD3_k127_4375525_6 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000005596 151.0
YYD3_k127_4375525_7 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K07081,K11782,K11784 - 1.21.98.1,4.2.1.151 0.00000000000000000000000000000001374 138.0
YYD3_k127_4375525_8 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000001068 129.0
YYD3_k127_4375525_9 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960,K20810 GO:0003674,GO:0003824,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0050270 3.5.4.28,3.5.4.31,3.5.4.40 0.0000000000000000000000000000005957 137.0
YYD3_k127_4379178_0 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007924 372.0
YYD3_k127_4379178_1 PFAM Fimbrial assembly family protein - - - 0.0000000000000000000000004969 119.0
YYD3_k127_4384436_0 rRNA (adenine-C2-)-methyltransferase activity K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000227 286.0
YYD3_k127_4384436_1 adenylate kinase activity K00939 GO:0003674,GO:0003824,GO:0004017,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.00000000000000000000000000000000000000000000000252 180.0
YYD3_k127_4404296_0 Belongs to the peptidase S8 family K13276 - - 0.00000000000000000000000000000000000000000000000000000006536 209.0
YYD3_k127_4404296_1 Leucyl aminopeptidase K19701 - 3.4.11.10,3.4.11.6 0.00000000000000000000000000000000000000002409 164.0
YYD3_k127_4409811_0 UDP-N-acetylmuramate-L-alanine ligase activity K01924 GO:0000166,GO:0000270,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008763,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0035639,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0046872,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.8 1.244e-202 640.0
YYD3_k127_4409811_1 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 311.0
YYD3_k127_4409811_2 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009533 260.0
YYD3_k127_4409811_3 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000006739 81.0
YYD3_k127_4409811_5 Cell division protein FtsQ K03589 - - 0.00000004313 64.0
YYD3_k127_4418371_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1386.0
YYD3_k127_4418371_1 PFAM Carbon starvation protein CstA K06200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009477 481.0
YYD3_k127_4439809_0 ftsk spoiiie K03466 - - 5.627e-233 746.0
YYD3_k127_4439809_1 Belongs to the ComB family K05979 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 3.1.3.71 0.000000000000000000000000000001382 126.0
YYD3_k127_4439809_2 lysyltransferase activity K07027 - - 0.00000000000000000000000000001643 124.0
YYD3_k127_4439809_3 Outer membrane lipoprotein-sorting protein - - - 0.0000000000001394 79.0
YYD3_k127_444901_0 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000004587 146.0
YYD3_k127_444901_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000004887 113.0
YYD3_k127_444901_3 cellulase activity K01201 - 3.2.1.45 0.000000000000000000000702 109.0
YYD3_k127_444901_4 Bacterial regulatory proteins, tetR family - - - 0.00000000000000001453 91.0
YYD3_k127_4462416_0 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 411.0
YYD3_k127_4462416_1 PFAM SPFH domain Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 318.0
YYD3_k127_4462416_2 transferase activity, transferring glycosyl groups K02844 - - 0.000000000000000000000000000000000000000000002404 176.0
YYD3_k127_4462416_3 polysaccharide biosynthetic process - - - 0.0006385 52.0
YYD3_k127_4485209_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 408.0
YYD3_k127_4485209_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 407.0
YYD3_k127_4485209_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 345.0
YYD3_k127_4485209_3 RNA recognition motif - - - 0.00000000000000000000001239 106.0
YYD3_k127_4485209_4 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000007201 79.0
YYD3_k127_4491163_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000444 600.0
YYD3_k127_4491163_1 Mannose-6-phosphate isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001191 256.0
YYD3_k127_4491163_2 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000001557 251.0
YYD3_k127_4491163_3 PFAM Heparinase II III family protein - - - 0.0000000000000000000000000000000000000000000000000000000000001113 241.0
YYD3_k127_4496413_0 DNA methylase K00590 - 2.1.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006475 398.0
YYD3_k127_4496413_1 PFAM cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000001884 129.0
YYD3_k127_4496413_2 ABC transporter K01990 - - 0.000000000000005172 77.0
YYD3_k127_4499063_0 PQQ-like domain K00114 - 1.1.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 548.0
YYD3_k127_4499063_1 Dehydrogenase K00114,K17760,K20936,K21676,K22473 - 1.1.2.8,1.1.2.9,1.1.5.5,1.1.9.1,1.17.2.2 0.0000000000000000000000000001534 124.0
YYD3_k127_4499063_2 Hexapeptide repeat of succinyl-transferase - - - 0.0000000000000000000000009477 107.0
YYD3_k127_4499063_3 transferase activity, transferring glycosyl groups - - - 0.00008125 51.0
YYD3_k127_4503029_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003369 542.0
YYD3_k127_4503029_1 Adenosine/AMP deaminase K01488 - 3.5.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000774 400.0
YYD3_k127_4503029_2 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000005547 218.0
YYD3_k127_4504324_0 phosphoserine phosphatase activity K01768,K07315 - 3.1.3.3,4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 446.0
YYD3_k127_4504324_1 Binding-protein-dependent transport system inner membrane component K02011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003242 382.0
YYD3_k127_4504324_2 PFAM Stage II sporulation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005221 374.0
YYD3_k127_4504324_3 Belongs to the 'phage' integrase family K03733 - - 0.00000000000000000000000000000000000000000000000000000001494 207.0
YYD3_k127_4504324_4 antisigma factor binding K04749,K06378 - - 0.00000000000000000000000000000000000000000006726 162.0
YYD3_k127_4504324_5 sigma factor antagonist activity K04757 - 2.7.11.1 0.000000000000000000000000000000004112 132.0
YYD3_k127_4504324_6 Tetratricopeptide repeat - - - 0.00000000000000000000000000000001358 135.0
YYD3_k127_4504324_7 general secretion pathway protein - - - 0.0000009651 52.0
YYD3_k127_450729_0 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 481.0
YYD3_k127_450729_1 ABC transporter permease K02005 - - 0.00000000000000000000000000001001 133.0
YYD3_k127_450729_2 ADP-heptose-lipopolysaccharide heptosyltransferase activity - - - 0.000000001756 60.0
YYD3_k127_4536397_0 membrane K05794 - - 0.0000000000000000000000000000000000000000000000004107 184.0
YYD3_k127_4536397_1 imidazolonepropionase activity - - - 0.00000000000000000000000000000000000000000000004745 173.0
YYD3_k127_4536397_2 PFAM phospholipase Carboxylesterase K06999 - - 0.0000000000000000000000000000000000004148 151.0
YYD3_k127_4536397_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase K15975 - - 0.00000003488 55.0
YYD3_k127_4540780_0 mannose-1-phosphate guanylyltransferase activity K00971,K01840,K16011 - 2.7.7.13,5.3.1.8,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008741 404.0
YYD3_k127_4540780_1 galactose-6-phosphate isomerase activity K00761,K01808 - 2.4.2.9,5.3.1.6 0.00000000000000000000000000000000000000000000000000003214 194.0
YYD3_k127_4540780_2 carbon-oxygen lyase activity, acting on polysaccharides K18691 - - 0.0000000000000000000000000000000000001468 151.0
YYD3_k127_4540780_3 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000003941 132.0
YYD3_k127_4540780_4 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000000000000000002905 130.0
YYD3_k127_4540780_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.00000000000000000004027 90.0
YYD3_k127_4571143_0 Leukotriene A4 hydrolase, C-terminal - - - 1.643e-194 620.0
YYD3_k127_4571143_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.000000000000000000000000000000000000000000000000000000000000000001118 241.0
YYD3_k127_4571143_2 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000397 191.0
YYD3_k127_4571143_3 Penicillin-Binding Protein C-terminus Family K05367 - 2.4.1.129 0.0000000000000000000008516 103.0
YYD3_k127_4587218_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 459.0
YYD3_k127_4587218_1 - - - - 0.0000000000000000000000000000000000000000000000000000000002297 214.0
YYD3_k127_4587218_2 glycosyl hydrolase, BNR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000001472 181.0
YYD3_k127_4587218_3 cellulose binding - - - 0.00000000000000000000001889 112.0
YYD3_k127_4587218_4 amidohydrolase K07045 - - 0.0000000000006926 79.0
YYD3_k127_4588634_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000009457 264.0
YYD3_k127_4588634_1 Belongs to the peptidase S8 family - - - 0.000000000000000000000000004755 116.0
YYD3_k127_4588634_2 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.00000000000000005506 85.0
YYD3_k127_4591737_0 Belongs to the peptidase S8 family - - - 2.45e-209 670.0
YYD3_k127_4591737_1 PFAM Uncharacterised protein family (UPF0164) - - - 0.000000000000000000000002148 106.0
YYD3_k127_4595762_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 2.042e-218 697.0
YYD3_k127_4642070_0 ApaG domain K06195 - - 0.00000000000000000000000000000000000000000000000345 175.0
YYD3_k127_4642070_1 Dehydrogenase K00102,K00104 - 1.1.2.4,1.1.3.15 0.000000000000000000000000005588 113.0
YYD3_k127_4642070_2 Predicted membrane protein (DUF2318) K09005 - - 0.00000000000000000000001846 104.0
YYD3_k127_4661531_0 undecaprenyl-phosphate glucose phosphotransferase activity K03606,K05946,K21303 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009987,GO:0016051,GO:0016740,GO:0016772,GO:0016780,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0046402,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.4.1.187,2.7.8.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009248 351.0
YYD3_k127_4661531_1 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.0000000000000000000000000000000000000000000007182 171.0
YYD3_k127_4696517_0 Polysaccharide biosynthesis protein K02851 - 2.7.8.33,2.7.8.35 1.02e-225 713.0
YYD3_k127_4696517_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 557.0
YYD3_k127_4696517_2 Putative heavy-metal-binding - - - 0.000000000000000000000000007894 110.0
YYD3_k127_4697248_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009249 614.0
YYD3_k127_4697248_1 Peptidase MA superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002713 262.0
YYD3_k127_4697248_2 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.000004367 48.0
YYD3_k127_4699779_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 472.0
YYD3_k127_4699779_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000007052 184.0
YYD3_k127_4699779_2 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000000000000002825 156.0
YYD3_k127_4699779_3 Domain of unknown function (DUF296) K06934 - - 0.000000000000000000000000000000000004276 141.0
YYD3_k127_4699779_4 belongs to the aldehyde dehydrogenase family K00132 - 1.2.1.10 0.000000000000000000000000000000004959 132.0
YYD3_k127_4709627_0 PFAM Glycosyl transferase, group 1 K12996 GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.000000000000000000000000000000000000000000000000000000000000000000000008322 255.0
YYD3_k127_4709627_1 Multidrug transporter K08161 - - 0.000000000000000000000000000000000000000000000000000000009084 204.0
YYD3_k127_4709627_2 Polysaccharide biosynthesis protein - - - 0.000000009053 58.0
YYD3_k127_4716414_0 peptidyl-prolyl cis-trans isomerase activity K03769,K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 342.0
YYD3_k127_4716414_1 peptidyl-prolyl cis-trans isomerase activity K03771 - 5.2.1.8 0.0000000000005512 71.0
YYD3_k127_4716414_2 cellulose binding - - - 0.000000002514 68.0
YYD3_k127_4716414_3 Peptidylprolyl isomerase K01802,K03769 - 5.2.1.8 0.0000001913 62.0
YYD3_k127_4717352_0 ergosterol biosynthetic process K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 291.0
YYD3_k127_4717352_1 FAD dependent oxidoreductase K00514 - 1.3.5.6 0.0000000000000000000000000000000000000000000000000000000000003056 228.0
YYD3_k127_4717352_2 ergosterol biosynthetic process K02291,K21679 - 2.5.1.32,2.5.1.99,4.2.3.156 0.0000000000000000000000000000000000000000000000000000000012 208.0
YYD3_k127_4717352_3 Membrane - - - 0.000000000000000000000000000000000000002386 161.0
YYD3_k127_4717352_4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000004237 90.0
YYD3_k127_4717352_5 Protein of unknown function (DUF1624) - - - 0.00000372 50.0
YYD3_k127_4750914_0 Sortilin, neurotensin receptor 3, - - - 0.0 1169.0
YYD3_k127_4750914_1 PFAM amino acid permease-associated region K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 404.0
YYD3_k127_4750914_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001878 302.0
YYD3_k127_4753124_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 2.286e-261 820.0
YYD3_k127_4753124_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 326.0
YYD3_k127_4753124_2 rRNA binding K02939 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000002961 196.0
YYD3_k127_4753124_3 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000236 107.0
YYD3_k127_4763604_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007062 460.0
YYD3_k127_4763604_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 413.0
YYD3_k127_4763604_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 341.0
YYD3_k127_4763604_3 response regulator receiver K07714 - - 0.000000000000000000005073 101.0
YYD3_k127_4766597_0 GMC oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 389.0
YYD3_k127_4766597_1 GMC oxidoreductase - - - 0.000000000000000000000000000000002539 134.0
YYD3_k127_4766597_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000009318 70.0
YYD3_k127_4770153_0 cellulose binding - - - 0.0000000000000000000000000000000000000000000001467 179.0
YYD3_k127_4770153_1 cellulose binding - - - 0.0000000000000000000001729 113.0
YYD3_k127_4770153_2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 0.00000000000006836 74.0
YYD3_k127_4778917_0 peptidase activity, acting on L-amino acid peptides K01187,K01448,K07752 - 3.2.1.20,3.4.17.22,3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000639 368.0
YYD3_k127_4778917_1 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.00000000000000000000000000005714 120.0
YYD3_k127_4778917_2 Helix-turn-helix XRE-family like proteins K21498 - - 0.0000000000000000000000002842 107.0
YYD3_k127_4780567_0 cobalamin-transporting ATPase activity K02014,K16092 - - 0.000000000000000000000000000000000000000000001577 185.0
YYD3_k127_4780567_1 Gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000001508 117.0
YYD3_k127_4780567_2 amine dehydrogenase activity - - - 0.00000000000004508 80.0
YYD3_k127_4780567_3 TonB-dependent receptor K02014 - - 0.0000008108 58.0
YYD3_k127_4786605_0 phenylalanine-tRNA ligase activity K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005473 451.0
YYD3_k127_4786605_1 Phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006227 317.0
YYD3_k127_4806181_0 ATP-dependent peptidase activity K01338 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004175,GO:0004176,GO:0004252,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006515,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009266,GO:0009314,GO:0009408,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017171,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051603,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 442.0
YYD3_k127_4806181_1 PFAM UspA domain protein - - - 0.00000000000000000008694 95.0
YYD3_k127_4806181_2 Putative zinc-finger - - - 0.000001809 59.0
YYD3_k127_4808151_0 protein transport K03076 GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 1.511e-210 661.0
YYD3_k127_4808151_1 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 317.0
YYD3_k127_4808151_10 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000008638 153.0
YYD3_k127_4808151_11 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000006662 140.0
YYD3_k127_4808151_12 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000007311 142.0
YYD3_k127_4808151_13 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009986,GO:0030246,GO:0030247,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:2001065 - 0.000000000000000000000000000000000008385 136.0
YYD3_k127_4808151_14 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) K02907 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000003331 93.0
YYD3_k127_4808151_15 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000009225 67.0
YYD3_k127_4808151_2 tRNA binding K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000006221 258.0
YYD3_k127_4808151_3 rRNA binding K02988 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990145,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000002032 246.0
YYD3_k127_4808151_4 rRNA binding K02933 GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000002282 233.0
YYD3_k127_4808151_5 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000001126 205.0
YYD3_k127_4808151_6 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000003573 205.0
YYD3_k127_4808151_7 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000297 193.0
YYD3_k127_4808151_8 rRNA binding K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.000000000000000000000000000000000000000000000007392 176.0
YYD3_k127_4808151_9 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000001156 156.0
YYD3_k127_4832819_0 quinolinate synthetase A activity K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 315.0
YYD3_k127_4832819_1 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02841,K02843,K12982 - - 0.000000000000000000000000000000000000000000000006363 183.0
YYD3_k127_4833990_0 Predicted membrane protein (DUF2339) - - - 0.000000000000000000000000000000000000000000000000000000001947 216.0
YYD3_k127_4833990_1 histidine kinase A domain protein - - - 0.00000000001743 69.0
YYD3_k127_4849503_0 transcriptional regulator K09017 - - 0.00000000000000000000000000000001903 134.0
YYD3_k127_4849503_1 cellulose binding - - - 0.0000000000007236 71.0
YYD3_k127_4849503_2 Biotin-lipoyl like K03543 - - 0.000005703 54.0
YYD3_k127_4853199_0 amino acid activation for nonribosomal peptide biosynthetic process K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007843 618.0
YYD3_k127_4853199_1 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008861 421.0
YYD3_k127_4853199_2 amino acid activation for nonribosomal peptide biosynthetic process K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000158 293.0
YYD3_k127_4853199_3 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001661 287.0
YYD3_k127_4854446_0 helicase activity K06915 - - 1.11e-200 636.0
YYD3_k127_4912543_0 extracellular matrix structural constituent - - - 0.0000000000000000000381 104.0
YYD3_k127_4912543_1 Surface antigen - - - 0.000004154 53.0
YYD3_k127_4913760_0 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000002185 216.0
YYD3_k127_4913760_1 chorismate synthase activity K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000844 204.0
YYD3_k127_4913760_2 Prephenate dehydrogenase K00210 - 1.3.1.12 0.00000000000000000000000000000000000000001798 162.0
YYD3_k127_4915894_0 Phosphate transporter family K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006662 420.0
YYD3_k127_4915894_1 Tetratricopeptide repeat - - - 0.00000000000000006127 91.0
YYD3_k127_4915894_2 Protein of unknown function DUF47 K07220 - - 0.00000000002266 64.0
YYD3_k127_4918639_0 Belongs to the glycosyl hydrolase 31 family K01811 - 3.2.1.177 3.385e-281 886.0
YYD3_k127_4918639_1 Domain of unknown function (DUF5110) K01187 - 3.2.1.20 1.912e-229 736.0
YYD3_k127_4918639_2 Inner membrane protein CreD K06143 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 432.0
YYD3_k127_4918639_3 membrane - - - 0.0000000000000000000000000000000000000253 148.0
YYD3_k127_4918639_4 Winged helix DNA-binding domain - - - 0.00000000000000000000000000000004753 132.0
YYD3_k127_4918639_5 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.000000000000000000000000009298 113.0
YYD3_k127_4938092_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000006791 242.0
YYD3_k127_4938092_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000006552 128.0
YYD3_k127_4938092_2 PFAM Activator of Hsp90 ATPase - - - 0.00000000000000000000000000003093 119.0
YYD3_k127_4938092_3 phosphorelay sensor kinase activity - - - 0.0000000000000000002281 104.0
YYD3_k127_4964953_0 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000008422 207.0
YYD3_k127_4964953_1 membrane organization K07277 - - 0.0000000000000000000000000000000004261 145.0
YYD3_k127_4969022_0 xylulokinase activity K00848,K00851,K00854 - 2.7.1.12,2.7.1.17,2.7.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 542.0
YYD3_k127_4969022_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.00000000000000000000000000000000000000000000000000000000003434 223.0
YYD3_k127_4969022_2 isomerase K01805 - 5.3.1.5 0.00000005361 62.0
YYD3_k127_4982167_0 transferase activity, transferring glycosyl groups K07011 - - 0.00000000000000000000000000000000000000000000000000000000003203 222.0
YYD3_k127_4982167_1 UDP-N-acetylglucosamine 2-epimerase activity - - - 0.000000000000000000000000000001357 136.0
YYD3_k127_4982167_2 Glycosyl transferase family 2 - - - 0.0000006305 55.0
YYD3_k127_4991124_0 TonB-dependent receptor - - - 0.0 1173.0
YYD3_k127_4991124_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 347.0
YYD3_k127_4992749_0 peptide catabolic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000607 330.0
YYD3_k127_4992749_1 Domain of unknown function (DUF4910) - - - 0.00000000000001615 87.0
YYD3_k127_4995017_0 radical SAM domain protein K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 491.0
YYD3_k127_4995017_1 cobalamin-transporting ATPase activity K02014,K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 454.0
YYD3_k127_4995017_2 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843,K02849 - - 0.00000000000000000000000000000000001438 152.0
YYD3_k127_4995017_3 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.000003051 55.0
YYD3_k127_4996571_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 519.0
YYD3_k127_4996571_1 S-adenosylhomocysteine deaminase activity K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003672 438.0
YYD3_k127_4996571_2 lipoprotein YddW precursor K01189 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 303.0
YYD3_k127_4996571_3 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000008262 167.0
YYD3_k127_5002574_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K16881 - 2.7.7.13,5.4.2.8 6.537e-297 932.0
YYD3_k127_5002574_1 CoA carboxylase activity K01966 - 2.1.3.15,6.4.1.3 2.206e-245 768.0
YYD3_k127_5002574_10 lipoprotein biosynthetic process K13292 - - 0.00000000000000000000000000000000000000000000000000000000000005714 224.0
YYD3_k127_5002574_11 phosphoenolpyruvate-dependent sugar phosphotransferase system K02768,K02769,K02770,K02806 - 2.7.1.202 0.000000000000000000000000000000000000000000000008882 175.0
YYD3_k127_5002574_13 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000005367 84.0
YYD3_k127_5002574_14 glutaredoxin 2 - - - 0.000000000003915 73.0
YYD3_k127_5002574_15 transferase activity, transferring glycosyl groups - - - 0.000008183 49.0
YYD3_k127_5002574_2 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003134 528.0
YYD3_k127_5002574_3 acyl-CoA dehydrogenase activity K00248,K11410,K18244 GO:0000062,GO:0000166,GO:0003674,GO:0003824,GO:0003995,GO:0004085,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005759,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009605,GO:0009719,GO:0009725,GO:0009987,GO:0009991,GO:0010033,GO:0014070,GO:0016020,GO:0016042,GO:0016043,GO:0016054,GO:0016491,GO:0016627,GO:0017076,GO:0019395,GO:0019605,GO:0019626,GO:0019752,GO:0022607,GO:0030258,GO:0030554,GO:0031090,GO:0031667,GO:0031960,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0033218,GO:0033539,GO:0033993,GO:0034440,GO:0036094,GO:0042221,GO:0042594,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046359,GO:0046395,GO:0046459,GO:0048037,GO:0048545,GO:0050660,GO:0050662,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051384,GO:0052890,GO:0055114,GO:0065003,GO:0070013,GO:0071704,GO:0071840,GO:0072329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901567,GO:1901575,GO:1901681 1.3.8.1,1.3.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005222 487.0
YYD3_k127_5002574_4 cystathionine gamma-synthase activity K01739,K01758,K01760,K01761 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004121,GO:0004123,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48,4.4.1.1,4.4.1.11,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 482.0
YYD3_k127_5002574_5 Cysteine synthase K01697,K01738,K12339 - 2.5.1.47,4.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 471.0
YYD3_k127_5002574_6 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009541 468.0
YYD3_k127_5002574_7 UDP-glucose 4-epimerase activity K01784,K17947 - 5.1.3.2,5.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005425 391.0
YYD3_k127_5002574_8 isobutyryl-CoA mutase activity K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 344.0
YYD3_k127_5002574_9 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000005902 241.0
YYD3_k127_5015300_0 PFAM Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 484.0
YYD3_k127_5015300_1 Peptidase, M16 K07263,K07623 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 452.0
YYD3_k127_5015300_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 410.0
YYD3_k127_5015300_3 Helix-turn-helix domain - - - 0.00000000000000000000007129 104.0
YYD3_k127_5015300_4 Protein of unknown function (DUF971) - - - 0.0000000000000000002219 91.0
YYD3_k127_5020002_0 LemA family K03744 - - 0.000000000000000000000001046 115.0
YYD3_k127_5020002_1 cAMP biosynthetic process - - - 0.000000000000006469 89.0
YYD3_k127_5030430_0 Amidohydrolase family K01443 - 3.5.1.25 2.386e-321 1014.0
YYD3_k127_5030430_1 tRNA-splicing ligase RtcB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 458.0
YYD3_k127_5030430_2 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000087 439.0
YYD3_k127_5030430_3 imidazolonepropionase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006751 252.0
YYD3_k127_5030430_4 Appr-1'-p processing enzyme K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000005553 233.0
YYD3_k127_5047486_0 deoxyribose-phosphate aldolase activity K00852,K01619,K01840,K01844 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 2.7.1.15,4.1.2.4,5.4.2.8,5.4.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007116 325.0
YYD3_k127_5047486_1 response to copper ion K07156 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000379 282.0
YYD3_k127_5047486_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008624 264.0
YYD3_k127_5047486_3 Predicted membrane protein (DUF2238) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000158 250.0
YYD3_k127_5047486_4 Domain of unknown function (DUF1905) - - - 0.0000000000000000000000000000000000004431 147.0
YYD3_k127_5047486_5 - - - - 0.0000000000000000000000000418 115.0
YYD3_k127_5047486_6 cellulose binding K09483 - 4.2.1.118 0.000000000000000000000002286 121.0
YYD3_k127_5047486_7 Tetratricopeptide repeat - - - 0.00000002067 60.0
YYD3_k127_5047486_8 - - - - 0.000007815 54.0
YYD3_k127_505113_0 Glycosyl transferase, family 2 K07011 - - 0.000000000000000000000000000000000000000000000000000000001003 213.0
YYD3_k127_505113_1 Transporter associated domain - - - 0.0000000000000000000000000000000000000003964 153.0
YYD3_k127_505113_2 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000005064 128.0
YYD3_k127_505302_0 PFAM Metal-dependent phosphohydrolase, HD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 386.0
YYD3_k127_505302_1 Cytidine monophosphokinase K00876 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000001254 256.0
YYD3_k127_505302_2 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, FAD binding, electron transport and carotenoid biosynthesis - - - 0.000000000000000000001312 96.0
YYD3_k127_5083726_0 Peptidase family M49 - - - 2.944e-194 619.0
YYD3_k127_5083726_1 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 498.0
YYD3_k127_5083726_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K05886 - 1.1.1.276 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 336.0
YYD3_k127_5100036_0 GTP binding K03977 GO:0000027,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0022613,GO:0022618,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032794,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0043021,GO:0043022,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 508.0
YYD3_k127_5100036_1 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000009318 213.0
YYD3_k127_5100036_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000002499 214.0
YYD3_k127_5100036_3 PFAM response regulator receiver - - - 0.000000000000000000000000001113 117.0
YYD3_k127_510934_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K03921 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0009605,GO:0009607,GO:0016020,GO:0030312,GO:0040007,GO:0043207,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0071944,GO:0075136 1.14.19.11,1.14.19.2,1.14.19.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007341 417.0
YYD3_k127_510934_1 DEAD DEAH box helicase domain protein K05592,K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004 344.0
YYD3_k127_510934_2 Cold shock protein domain K03704 - - 0.0000000000000000000000000301 108.0
YYD3_k127_5124513_0 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000004162 183.0
YYD3_k127_5124513_1 Putative ATP-binding cassette K01992 - - 0.0000000000000000000000000000000000000000001018 179.0
YYD3_k127_5124513_2 Receptor family ligand binding region - - - 0.00000000000000000000000006193 124.0
YYD3_k127_5124513_3 ABC transporter K01990 - - 0.0000000001514 63.0
YYD3_k127_5152140_0 deaminase activity K01488 GO:0003674,GO:0003824,GO:0004000,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006144,GO:0006152,GO:0006154,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009113,GO:0009116,GO:0009119,GO:0009163,GO:0009164,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042278,GO:0042440,GO:0042451,GO:0042454,GO:0042455,GO:0042737,GO:0043094,GO:0043096,GO:0043101,GO:0043103,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046085,GO:0046100,GO:0046101,GO:0046102,GO:0046103,GO:0046112,GO:0046128,GO:0046129,GO:0046130,GO:0046148,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0072523,GO:1901135,GO:1901136,GO:1901137,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659 3.5.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 533.0
YYD3_k127_5152140_1 phosphorelay signal transduction system K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000314 430.0
YYD3_k127_5152140_2 Adenosine specific kinase K09129 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007666 248.0
YYD3_k127_5152140_3 tRNA rRNA methyltransferase (SpoU) - - - 0.0000000000000000000000000000000007171 141.0
YYD3_k127_5152140_4 Phosphoglycerate mutase family K08296 - - 0.0000000000000002308 85.0
YYD3_k127_5152140_5 cellulose binding K12132 - 2.7.11.1 0.00000000000000558 87.0
YYD3_k127_5152201_0 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030312,GO:0030955,GO:0031004,GO:0031224,GO:0031226,GO:0031420,GO:0032991,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090533,GO:0090662,GO:0098533,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.12 3.219e-248 780.0
YYD3_k127_5152201_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009622 513.0
YYD3_k127_5152201_2 ATP-dependent DNA helicase activity K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000925 374.0
YYD3_k127_5152201_3 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 - 3.6.3.12 0.000000000000000000000000000000000000000000000000000000000000000000002039 245.0
YYD3_k127_5152201_4 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000006788 225.0
YYD3_k127_5152201_5 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031004,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090533,GO:0090662,GO:0098533,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.12 0.0000000000000000000000000000000000000057 150.0
YYD3_k127_5152201_6 TonB dependent receptor - - - 0.00001877 54.0
YYD3_k127_5184201_0 phospho-2-dehydro-3-deoxyheptonate aldolase K03856,K04516 - 2.5.1.54,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 433.0
YYD3_k127_5184201_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000009923 223.0
YYD3_k127_5184201_2 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000000001184 207.0
YYD3_k127_5184201_3 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.0000000000000000000000000000000000000002654 154.0
YYD3_k127_5195520_0 PFAM cytochrome bd ubiquinol oxidase subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004455 430.0
YYD3_k127_5195520_1 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006359 315.0
YYD3_k127_5195520_2 belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000000000004485 202.0
YYD3_k127_5195520_3 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000003805 181.0
YYD3_k127_5195520_4 OsmC-like protein K07397 - - 0.000000000000000000000000000000000000000000000004114 178.0
YYD3_k127_5195520_5 Putative regulatory protein - - - 0.00000001231 59.0
YYD3_k127_5195520_6 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000002463 58.0
YYD3_k127_5207856_0 phosphorelay sensor kinase activity - - - 0.0000000000000000000000000009045 131.0
YYD3_k127_5242023_0 transferase activity, transferring glycosyl groups K00694,K00786 - 2.4.1.12 3.115e-225 709.0
YYD3_k127_5242023_1 Sigma-54 interaction domain K03413,K13589 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 335.0
YYD3_k127_5242023_3 thioesterase K07107,K12500 - - 0.000000000000000000000000000001148 124.0
YYD3_k127_5242023_4 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000006593 71.0
YYD3_k127_5242023_5 Cytochrome P460 - - - 0.00001301 54.0
YYD3_k127_5242023_6 Tetratricopeptide repeat - - - 0.0000192 55.0
YYD3_k127_5254236_0 Polysaccharide biosynthesis protein K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000003483 231.0
YYD3_k127_5254236_1 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000008572 230.0
YYD3_k127_5254236_2 succinyl-diaminopimelate desuccinylase activity K01436,K01438,K01439 - 3.5.1.16,3.5.1.18 0.000000000000000000000000000000000000000000000000001944 186.0
YYD3_k127_5254236_3 - - - - 0.000000000000002272 77.0
YYD3_k127_5260847_0 TonB-dependent receptor - - - 8.459e-247 782.0
YYD3_k127_5260847_1 DNA photolyase K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 548.0
YYD3_k127_5260847_2 Lipocalin / cytosolic fatty-acid binding protein family K03098 - - 0.000000000000000000000000000000000000000000000000000000000000003049 222.0
YYD3_k127_5260847_3 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.00000000000000000000000000000000000001032 150.0
YYD3_k127_5260847_4 B12 binding domain - - - 0.00000000000000000000000000000884 133.0
YYD3_k127_5272388_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 556.0
YYD3_k127_5273945_0 (ABC) transporter K06147,K18890 - - 7.195e-251 786.0
YYD3_k127_5273945_1 (ABC) transporter K06147,K18889 - - 2.367e-201 643.0
YYD3_k127_5273945_2 seryl-tRNA synthetase K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 479.0
YYD3_k127_5273945_3 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 287.0
YYD3_k127_5273945_4 DNA helicase K03657 - 3.6.4.12 0.0000000000000000000006285 100.0
YYD3_k127_5280951_0 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 396.0
YYD3_k127_5280951_1 Belongs to the DegT DnrJ EryC1 family K02805 - 2.6.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006848 345.0
YYD3_k127_5280951_10 Glycosyl transferases group 1 - - - 0.000000000000000000000000000005826 132.0
YYD3_k127_5280951_11 cellulose binding - - - 0.0000000000000000000000006037 121.0
YYD3_k127_5280951_12 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000005491 91.0
YYD3_k127_5280951_13 - - - - 0.00000000000000001087 85.0
YYD3_k127_5280951_2 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006124 340.0
YYD3_k127_5280951_3 - K02450 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001185 263.0
YYD3_k127_5280951_4 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000463 200.0
YYD3_k127_5280951_5 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000002218 210.0
YYD3_k127_5280951_6 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000017 200.0
YYD3_k127_5280951_7 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000000000006957 171.0
YYD3_k127_5280951_8 endo-1,4-beta-xylanase activity K21636 - 1.1.98.6 0.00000000000000000000000000000000000000003641 174.0
YYD3_k127_5280951_9 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000006706 149.0
YYD3_k127_5282887_0 Glycosyl hydrolase family 57 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 409.0
YYD3_k127_5282887_1 PFAM alpha amylase, catalytic region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004888 246.0
YYD3_k127_5282887_2 PFAM Uncharacterised BCR, COG1649 - - - 0.000000000000000000000000006593 111.0
YYD3_k127_5282887_3 1,4-alpha-glucan branching enzyme activity K00700 - 2.4.1.18 0.0000000001328 75.0
YYD3_k127_5289002_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.000000000000000000000000000000000000000000000000000000000000000002273 250.0
YYD3_k127_5289002_1 Short-chain dehydrogenase reductase SDR K00059,K18337 - 1.1.1.100,1.1.1.173,1.1.1.377,1.1.1.378 0.00000000000000000000000000000000000000000000000000003379 196.0
YYD3_k127_5289002_2 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.00000000000000000000000000000000000000002679 169.0
YYD3_k127_5289002_3 Short-chain dehydrogenase reductase sdr K00065 - 1.1.1.127 0.000000000000000000000000000009187 126.0
YYD3_k127_52947_0 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006268 289.0
YYD3_k127_52947_1 Uncharacterized conserved protein (DUF2203) - - - 0.0000000000000000002405 92.0
YYD3_k127_52947_2 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.0000000000003743 73.0
YYD3_k127_5295515_0 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000974 314.0
YYD3_k127_5295515_1 PFAM Phenylalanine and histidine ammonia-lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000008895 263.0
YYD3_k127_5298312_0 DNA-directed 5'-3' RNA polymerase activity K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 3.104e-290 898.0
YYD3_k127_5298312_1 DNA-directed 5'-3' RNA polymerase activity K03043,K13797 GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.0000000000000000000000000000000000000000000000000000007243 192.0
YYD3_k127_5309261_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 331.0
YYD3_k127_5309261_1 Peptidase M56 - - - 0.00000000000000000000000000000000000002484 160.0
YYD3_k127_5317719_0 helicase superfamily c-terminal domain K03732 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000233 537.0
YYD3_k127_5317719_1 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009426 528.0
YYD3_k127_5317719_2 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007039 448.0
YYD3_k127_5317719_3 Belongs to the UPF0145 family - - - 0.0000000000000000000000000000000000000000002487 162.0
YYD3_k127_5317719_4 PFAM Rhomboid family protein - - - 0.0000000000000000000000000000000006162 140.0
YYD3_k127_5317719_5 Acetyltransferase (GNAT) family - - - 0.0000000003577 60.0
YYD3_k127_5338674_1 TonB-dependent receptor - - - 4.763e-280 887.0
YYD3_k127_5338674_2 cellulose binding K00505 - 1.14.18.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 364.0
YYD3_k127_5338674_3 LacI family K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008467 245.0
YYD3_k127_5348519_0 C-terminal region of band_7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 441.0
YYD3_k127_5348519_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003724 443.0
YYD3_k127_5348519_2 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000003045 188.0
YYD3_k127_5348519_3 NfeD-like C-terminal, partner-binding - - - 0.0000000000000000000000008071 110.0
YYD3_k127_5374540_0 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002636 252.0
YYD3_k127_5374540_1 peroxiredoxin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000009199 229.0
YYD3_k127_5374540_2 methyltransferase - - - 0.000000000000000000000000000000000000000000000002467 185.0
YYD3_k127_5374540_3 Rhomboid family - - - 0.0000000000000000000000000000000000000000000001043 175.0
YYD3_k127_5374540_4 PFAM Isoprenylcysteine carboxyl methyltransferase - - - 0.0000000000000000000000000007397 123.0
YYD3_k127_5374540_6 - K07275 - - 0.0000001454 56.0
YYD3_k127_5382385_0 Oligoendopeptidase f - - - 1.14e-199 633.0
YYD3_k127_5382385_1 Histidine kinase K02480,K07683 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 350.0
YYD3_k127_5382385_2 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000001981 205.0
YYD3_k127_5382385_3 peptide catabolic process - - - 0.0000000000000000001834 103.0
YYD3_k127_5386728_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 392.0
YYD3_k127_5386728_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 296.0
YYD3_k127_5386728_2 PhoQ Sensor K01768,K04769,K10914 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000002728 271.0
YYD3_k127_5388252_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.165e-297 933.0
YYD3_k127_5388252_1 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000001399 152.0
YYD3_k127_5388252_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000002617 104.0
YYD3_k127_5388252_3 Belongs to the small heat shock protein (HSP20) family K01551,K13993 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006457,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0033554,GO:0034605,GO:0034620,GO:0035966,GO:0035967,GO:0042221,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0050896,GO:0051082,GO:0051716,GO:0051788,GO:0061077,GO:0070887,GO:0071218,GO:0071310 3.6.3.16 0.000000000000001215 83.0
YYD3_k127_5396016_0 Pyridine nucleotide-disulphide oxidoreductase K00384,K21567 - 1.18.1.2,1.19.1.1,1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 371.0
YYD3_k127_5396016_1 - - - - 0.0000000000000001063 91.0
YYD3_k127_5400099_0 phosphorelay signal transduction system K02481,K07713,K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 537.0
YYD3_k127_5400099_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 399.0
YYD3_k127_5400099_2 Peptidase family M54 K06974 - - 0.000000000000000000000000000000002079 137.0
YYD3_k127_5403482_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000002278 148.0
YYD3_k127_5403482_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000003355 105.0
YYD3_k127_5404592_0 enterobactin catabolic process K07214 - - 0.000000000000000000000000000000000000000000000000000000000000000007183 244.0
YYD3_k127_5404592_1 Transposase - - - 0.0000000000000000000000000000000000000002535 157.0
YYD3_k127_5404592_2 Cleaves the N-terminal amino acid of tripeptides K01258 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0071704,GO:1901564 3.4.11.4 0.00000000000000000000000007925 108.0
YYD3_k127_5433901_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008286 455.0
YYD3_k127_5433901_1 Beta-Casp domain K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000101 221.0
YYD3_k127_5433901_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000005616 234.0
YYD3_k127_5433901_3 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000005272 128.0
YYD3_k127_5433901_4 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000001147 121.0
YYD3_k127_5433901_5 sigma factor antagonist activity K04757,K06379,K08282 - 2.7.11.1 0.000000000000000000000001314 109.0
YYD3_k127_5435384_0 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03072,K12257 - - 5.89e-199 639.0
YYD3_k127_5435384_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 579.0
YYD3_k127_5435384_2 Histidine kinase K07709,K13924 - 2.1.1.80,2.7.13.3,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 382.0
YYD3_k127_5435384_3 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03072,K03074,K12257 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009302 274.0
YYD3_k127_5435384_4 deaminated base DNA N-glycosylase activity K21929 GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0033958,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000005298 263.0
YYD3_k127_5435384_5 Putative esterase - - - 0.00000000000000000000000000000006889 125.0
YYD3_k127_5435384_6 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000000000000000000000000002314 121.0
YYD3_k127_5435384_7 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K01802,K03770 - 5.2.1.8 0.00000000000000001521 88.0
YYD3_k127_5435384_8 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000005425 87.0
YYD3_k127_5439784_0 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 443.0
YYD3_k127_5439784_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000001446 193.0
YYD3_k127_5439784_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000001488 87.0
YYD3_k127_5447220_0 (ABC) transporter K02021,K06147,K06148,K11085 - - 1.843e-212 671.0
YYD3_k127_5447220_1 Glycosyl transferase, family 2 K12984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001365 272.0
YYD3_k127_5447220_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000001024 216.0
YYD3_k127_5447220_3 Domain of unknown function (DUF1844) - - - 0.000000000000000000002888 96.0
YYD3_k127_5447220_4 O-Antigen ligase - - - 0.000000000000000007212 97.0
YYD3_k127_545605_0 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 497.0
YYD3_k127_545605_1 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001399 280.0
YYD3_k127_5466374_0 calcium- and calmodulin-responsive adenylate cyclase activity K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005615 596.0
YYD3_k127_5466374_1 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K06898,K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000001432 185.0
YYD3_k127_5478490_0 PFAM glycosyl transferase group 1 K13057 - 2.4.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 586.0
YYD3_k127_5478490_1 transferase activity, transferring glycosyl groups - - - 0.00000546 48.0
YYD3_k127_5478490_2 PFAM glycosyl transferase family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.0001621 46.0
YYD3_k127_5485309_0 Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family K03317 - - 6.975e-194 614.0
YYD3_k127_5485309_1 thymidine kinase activity K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002058 274.0
YYD3_k127_5485309_2 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000001228 271.0
YYD3_k127_5485309_3 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000006053 258.0
YYD3_k127_5485309_4 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000001179 224.0
YYD3_k127_5485309_5 Cytochrome oxidase assembly protein K02259 - - 0.000000000000000000000000000000000000000000000000000000004264 212.0
YYD3_k127_5485309_6 Protein of unknown function (DUF420) K08976 - - 0.0000000000000000000000000000000000000000000312 165.0
YYD3_k127_5486232_0 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 426.0
YYD3_k127_5486232_1 glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002811 248.0
YYD3_k127_5486232_2 Bacterial membrane protein YfhO - - - 0.000000000000000000000000000000000000000000000000000000000352 228.0
YYD3_k127_5486526_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004422 478.0
YYD3_k127_5486526_1 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000005153 218.0
YYD3_k127_5486526_2 Concanavalin A-like lectin/glucanases superfamily - - - 0.0000000000000002534 78.0
YYD3_k127_5486526_3 Polysaccharide biosynthesis export protein - - - 0.00000001029 61.0
YYD3_k127_5491774_0 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007844 359.0
YYD3_k127_5491774_1 Methionine synthase K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000001257 259.0
YYD3_k127_5504468_0 transcription antitermination K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0030312,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004871 526.0
YYD3_k127_5504468_1 glucosamine-1-phosphate N-acetyltransferase activity K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 359.0
YYD3_k127_5504468_2 chaperone-mediated protein folding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 316.0
YYD3_k127_5504468_3 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005347 309.0
YYD3_k127_5504468_4 ZIP Zinc transporter K07238,K16267 - - 0.0000000000000000000000000000000000000000000000006857 183.0
YYD3_k127_5504468_5 Binds the 23S rRNA K02909 GO:0008150,GO:0040007 - 0.0000000000000000000000000005334 115.0
YYD3_k127_5504468_6 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639,K00652 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0016874,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29,2.3.1.47 0.0004362 43.0
YYD3_k127_5523551_0 Heavy metal transport detoxification protein K17686 - 3.6.3.54 2.692e-217 696.0
YYD3_k127_5523551_1 metallocarboxypeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 556.0
YYD3_k127_5523551_10 Transcriptional regulatory protein, C terminal K07669,K07672 - - 0.000000000000000000000003113 111.0
YYD3_k127_5523551_11 Tetratricopeptide repeat - - - 0.0000000000000000000003183 110.0
YYD3_k127_5523551_12 cellulose binding - - - 0.000000000000000000001277 108.0
YYD3_k127_5523551_13 mercury ion transmembrane transporter activity K07213 - - 0.0000000000004474 72.0
YYD3_k127_5523551_14 - - - - 0.00000003739 59.0
YYD3_k127_5523551_2 Glycosyl transferase family group 2 K11740 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005673 351.0
YYD3_k127_5523551_3 transferase activity, transferring glycosyl groups K00754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 328.0
YYD3_k127_5523551_4 Nodulation protein S (NodS) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001683 246.0
YYD3_k127_5523551_5 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000002396 211.0
YYD3_k127_5523551_6 Ser-tRNA(Ala) hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000007365 204.0
YYD3_k127_5523551_7 s1 p1 nuclease - - - 0.000000000000000000000000000000000002866 153.0
YYD3_k127_5523551_8 NUDIX domain - - - 0.0000000000000000000000000000000009745 137.0
YYD3_k127_5523551_9 aminopeptidase K01256 - 3.4.11.2 0.0000000000000000000000000000000748 137.0
YYD3_k127_5533059_1 N-terminus of Esterase_SGNH_hydro-type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 401.0
YYD3_k127_5533059_4 protein auto-ADP-ribosylation - - - 0.000000000000000000000000000000000004775 156.0
YYD3_k127_5537494_0 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 450.0
YYD3_k127_5537494_1 oxidoreductase activity K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005346 414.0
YYD3_k127_5537494_2 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 367.0
YYD3_k127_5537494_3 oxidoreductase activity K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007618 350.0
YYD3_k127_5537494_4 cytochrome complex assembly K02198,K02200,K04016,K04017,K04018 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016043,GO:0016491,GO:0016667,GO:0017003,GO:0017004,GO:0017006,GO:0018063,GO:0018193,GO:0018198,GO:0018378,GO:0019538,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0098552,GO:0098567,GO:1901564 - 0.0000000000000000000000000000000000000000001379 171.0
YYD3_k127_5537494_5 protein trimerization - - - 0.000000000000000000000000000000000000000001159 165.0
YYD3_k127_5537494_6 Associated with various cellular activities K03924 - - 0.0000000000000000000000000000002962 123.0
YYD3_k127_5537494_7 peptidyl-tyrosine sulfation - - - 0.000000000000000000000001594 108.0
YYD3_k127_5537940_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 315.0
YYD3_k127_5537940_1 translation initiation factor activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 297.0
YYD3_k127_5537940_2 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000004297 244.0
YYD3_k127_5537940_3 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000006811 132.0
YYD3_k127_5541020_0 conserved protein (DUF2088) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053 418.0
YYD3_k127_5541020_1 Transcriptional regulator K13641 - - 0.00000000000000000000000000000000000001016 154.0
YYD3_k127_5541020_2 myo-inosose-2 dehydratase activity - - - 0.00000000000000000000000000000005967 132.0
YYD3_k127_5545827_0 - - - - 0.0 1367.0
YYD3_k127_5545827_1 lipopolysaccharide-transporting ATPase activity K07091,K11720 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 429.0
YYD3_k127_5545827_2 Involved in the tonB-independent uptake of proteins K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000046 400.0
YYD3_k127_5545827_3 lipopolysaccharide-transporting ATPase activity K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 338.0
YYD3_k127_5545827_4 - - - - 0.0000000000000000000000000000000000000000000000000000005985 203.0
YYD3_k127_5566617_0 peptidase S16 K01338,K04076,K04770 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 613.0
YYD3_k127_5566617_1 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 0.000000000000007432 77.0
YYD3_k127_5574647_0 transcriptional regulator - - - 0.00003086 51.0
YYD3_k127_5608376_0 protein secretion - - - 0.000000000000000000000000000000000000000000000203 190.0
YYD3_k127_5608376_1 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000005895 55.0
YYD3_k127_5614841_0 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 478.0
YYD3_k127_5614841_1 cellulose binding - - - 0.0000000000000000000000000000000000000000000009727 175.0
YYD3_k127_5614841_2 TonB dependent receptor K02014 - - 0.000000004402 59.0
YYD3_k127_5618996_0 TonB-dependent Receptor Plug - - - 4.615e-244 782.0
YYD3_k127_5618996_1 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 483.0
YYD3_k127_5626212_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 446.0
YYD3_k127_5626212_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000004563 215.0
YYD3_k127_5626212_2 Histidine kinase K01768,K12132 - 2.7.11.1,4.6.1.1 0.00000000000000000000000000000000000000005841 155.0
YYD3_k127_5626212_3 bis(5'-adenosyl)-triphosphatase activity K02503 - - 0.00000000000000000000000000000001144 129.0
YYD3_k127_5626212_4 - - - - 0.00000000000000000000000003077 124.0
YYD3_k127_5626212_5 - - - - 0.00000000000000000008421 105.0
YYD3_k127_5626212_6 CotH kinase protein - - - 0.00000000000000001338 83.0
YYD3_k127_5633571_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000314 486.0
YYD3_k127_5633571_1 arsenite transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004966 455.0
YYD3_k127_5633571_2 ATP synthesis coupled electron transport K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006001 421.0
YYD3_k127_5633571_3 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004629 416.0
YYD3_k127_5633571_4 protein transport K03210 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031522,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000001571 141.0
YYD3_k127_5633571_5 VanZ like family - - - 0.00000001923 62.0
YYD3_k127_5693041_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000001869 222.0
YYD3_k127_5693041_1 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000007328 144.0
YYD3_k127_5693108_0 Major Facilitator Superfamily K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 613.0
YYD3_k127_5693108_1 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004772 598.0
YYD3_k127_5693108_2 PFAM Uncharacterised conserved protein UCP016719 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 526.0
YYD3_k127_5693108_3 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 507.0
YYD3_k127_5693108_4 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 464.0
YYD3_k127_5693108_5 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 425.0
YYD3_k127_5693108_6 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 341.0
YYD3_k127_5693108_7 UDPglucose--hexose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 315.0
YYD3_k127_5693108_8 PFAM metallophosphoesterase K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 294.0
YYD3_k127_5693108_9 acetyltransferase K22441 - 2.3.1.57 0.0000000000000000000000000000000000000006177 154.0
YYD3_k127_5699953_0 ABC-type uncharacterized transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 362.0
YYD3_k127_5699953_1 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 310.0
YYD3_k127_5699953_2 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000001482 217.0
YYD3_k127_5699953_3 Domain of unknown function (DUF4340) - - - 0.00000000004625 73.0
YYD3_k127_5710259_0 Amp-dependent synthetase and ligase K01897 - 6.2.1.3 1.83e-211 673.0
YYD3_k127_5710259_1 Amino acid permease K03294 - - 0.0000000000000002905 79.0
YYD3_k127_572862_0 ADP-L-glycero-beta-D-manno-heptose biosynthetic process K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000004523 182.0
YYD3_k127_572862_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000005136 89.0
YYD3_k127_572862_2 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.000000000007651 68.0
YYD3_k127_5731812_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007094 571.0
YYD3_k127_5731812_1 argininosuccinate lyase activity K01755,K14681 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004295 402.0
YYD3_k127_5731812_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 376.0
YYD3_k127_5731812_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016020,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0030312,GO:0031406,GO:0034618,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007098 322.0
YYD3_k127_5731812_4 Regulates arginine biosynthesis genes K03402 - - 0.000000000000000000000000000002932 125.0
YYD3_k127_5736346_0 CTP synthase activity K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016020,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 4.588e-212 670.0
YYD3_k127_5736346_1 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006253 335.0
YYD3_k127_5736346_2 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000001752 268.0
YYD3_k127_5736346_3 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000001906 170.0
YYD3_k127_5736346_4 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000062 166.0
YYD3_k127_5736346_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000002375 108.0
YYD3_k127_5737139_0 COG4422 Bacteriophage protein gp37 - - - 0.00000000000000000000000000000000000000000000000000000000000000001568 230.0
YYD3_k127_5737139_1 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000006245 168.0
YYD3_k127_5737139_2 translation initiation factor activity K03699 - - 0.00000000000000000000008727 99.0
YYD3_k127_5743416_0 lactate metabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 589.0
YYD3_k127_5743416_1 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008884 575.0
YYD3_k127_5743416_2 DsrC like protein K11179 - - 0.0000000000000000000000000000000000000000000000003803 178.0
YYD3_k127_5743416_3 - - - - 0.000000000000000000000000000003194 123.0
YYD3_k127_5748314_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 394.0
YYD3_k127_5748314_1 - - - - 0.00000000000000000000000000000000000009497 147.0
YYD3_k127_5748314_2 nucleotide catabolic process K11751 - 3.1.3.5,3.6.1.45 0.000000000000000000000000009726 118.0
YYD3_k127_5748314_3 Chalcone and stilbene synthases, C-terminal domain K16167,K16424 GO:0003674,GO:0003824,GO:0016740,GO:0016746,GO:0016747 2.3.1.246 0.0000001051 57.0
YYD3_k127_5756505_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008431 355.0
YYD3_k127_5756505_1 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000008192 175.0
YYD3_k127_5756505_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K18348 - 5.1.1.1,5.1.1.18 0.000000000000000000000000002242 113.0
YYD3_k127_5758804_0 fatty acid beta-oxidation using acyl-CoA dehydrogenase K03522 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004669 359.0
YYD3_k127_5758804_1 electron transfer activity K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003875 276.0
YYD3_k127_5758804_2 cellulase activity K01201 - 3.2.1.45 0.000000000000000000003051 108.0
YYD3_k127_579205_0 transmembrane transport K02025,K15771 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006532 424.0
YYD3_k127_579205_1 ABC transporter substrate-binding protein K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 398.0
YYD3_k127_579205_2 glycerophosphodiester transmembrane transport K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003852 340.0
YYD3_k127_579205_3 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003599 304.0
YYD3_k127_579205_4 peptidyl-prolyl cis-trans isomerase activity - - - 0.0000003248 60.0
YYD3_k127_5799827_0 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000002181 177.0
YYD3_k127_5799827_1 Protein of unknown function (DUF3788) - - - 0.000000000000000000000000000007146 123.0
YYD3_k127_5799827_2 - - - - 0.000000004767 65.0
YYD3_k127_5816679_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 416.0
YYD3_k127_5816679_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003214 339.0
YYD3_k127_5816679_2 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000008475 53.0
YYD3_k127_5821805_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1180.0
YYD3_k127_5821805_1 Zn-dependent dipeptidase, microsomal dipeptidase K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009505 498.0
YYD3_k127_5821805_2 membrane organization K07277 - - 0.00000000000000000000000000000000000000000000000000000000000006641 233.0
YYD3_k127_5821805_3 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 0.000000000000000000000000000000000000000001627 168.0
YYD3_k127_5821805_4 cyclohydrolase - - - 0.0000000000000000000000007386 108.0
YYD3_k127_5821805_5 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000004365 59.0
YYD3_k127_5835547_0 Bacterial type II and III secretion system protein K02666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 475.0
YYD3_k127_5835547_1 Type II secretion system protein E K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 462.0
YYD3_k127_5835547_2 TonB-dependent receptor plug K02014,K16089 - - 0.00000000000000000000000000000000000000004598 160.0
YYD3_k127_5837825_0 Participates in transcription elongation, termination and antitermination K02601 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016020,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0030312,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043244,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000005319 226.0
YYD3_k127_5837825_1 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010467,GO:0015934,GO:0015968,GO:0016043,GO:0019538,GO:0019843,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0032984,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0042594,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0065003,GO:0070925,GO:0071496,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000001463 223.0
YYD3_k127_5837825_2 regulation of translation K02863 GO:0000027,GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006417,GO:0006446,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0017148,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045947,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - 0.000000000000000000000000000000000000001284 152.0
YYD3_k127_5837825_3 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000001071 81.0
YYD3_k127_5837825_4 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03073 GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.000000000000159 74.0
YYD3_k127_5837825_5 Endonuclease containing a URI domain K07461 - - 0.0000000001188 66.0
YYD3_k127_5837825_6 - - - - 0.00001192 52.0
YYD3_k127_5866587_0 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000005397 179.0
YYD3_k127_5871130_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 341.0
YYD3_k127_5871130_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000003593 214.0
YYD3_k127_5871130_2 ADP-heptose-lipopolysaccharide heptosyltransferase activity - - - 0.000000000000000000000002371 106.0
YYD3_k127_5872585_0 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 533.0
YYD3_k127_5872585_1 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000181 229.0
YYD3_k127_5872585_2 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000000000009522 212.0
YYD3_k127_5872585_3 Cytochrome c - - - 0.00000000000004926 74.0
YYD3_k127_5889177_0 Nickel-dependent hydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006065 587.0
YYD3_k127_5889177_1 coenzyme F420 hydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006745 396.0
YYD3_k127_5889177_2 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003229 338.0
YYD3_k127_5889177_3 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001234 258.0
YYD3_k127_5889177_4 Hydrogenase maturation protease - - - 0.000000000000000000000000000005303 125.0
YYD3_k127_5889177_5 Hydrogenase nickel incorporation protein hypA K04651 - - 0.0000000000000000000201 97.0
YYD3_k127_5889177_6 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.0000000000000001029 79.0
YYD3_k127_5892832_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 427.0
YYD3_k127_5892832_1 Creatinine amidohydrolase K01470 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 357.0
YYD3_k127_5892832_2 HlyD family secretion protein K02005,K13888 - - 0.000003837 53.0
YYD3_k127_5902566_0 Polysulphide reductase, NrfD - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 329.0
YYD3_k127_5902566_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003031 280.0
YYD3_k127_5902566_2 Glycine cleavage H-protein - - - 0.0000008881 55.0
YYD3_k127_5911486_0 - - - - 7.651e-201 632.0
YYD3_k127_5911486_1 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 417.0
YYD3_k127_5911486_2 Peptidase M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 370.0
YYD3_k127_5911486_3 Metal dependent phosphohydrolases with conserved 'HD' motif. K06950 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 303.0
YYD3_k127_5911486_4 mRNA binding - - - 0.0000000000000000000000000005813 115.0
YYD3_k127_5911486_5 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000000000000000000166 108.0
YYD3_k127_5911486_6 Tetratricopeptide repeat - - - 0.000000000001366 71.0
YYD3_k127_5911486_7 Outer membrane protein beta-barrel domain - - - 0.0000009088 59.0
YYD3_k127_5929983_0 symporter activity K03307 - - 3.362e-303 938.0
YYD3_k127_5929983_1 Glycosyl hydrolase family 47 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 503.0
YYD3_k127_5929983_2 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009603 257.0
YYD3_k127_5929983_3 FGGY family of carbohydrate kinases, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000002269 190.0
YYD3_k127_5929983_4 pfkB family carbohydrate kinase - - - 0.000000000000000000004778 96.0
YYD3_k127_593035_0 helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 495.0
YYD3_k127_593035_1 - - - - 0.0000000000000000000000000000000000000000000000001288 182.0
YYD3_k127_593035_2 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K13531 - 2.1.1.63 0.000000000000000000000000000000000000000002553 164.0
YYD3_k127_5951447_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 9.979e-283 881.0
YYD3_k127_5951447_1 translation initiation factor activity K02520 GO:0000049,GO:0001731,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016020,GO:0016043,GO:0019222,GO:0019538,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032268,GO:0032270,GO:0032790,GO:0032984,GO:0032988,GO:0032991,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043254,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045727,GO:0045948,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065003,GO:0065007,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901193,GO:1901195,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:1904688,GO:1904690,GO:1990856,GO:1990904,GO:2000112,GO:2000765,GO:2000767 - 0.00000000000000000000000000000000000000000000000000000003167 201.0
YYD3_k127_5951447_2 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000001257 71.0
YYD3_k127_5958641_0 cellulase activity K01361,K20276 - 3.4.21.96 6.717e-246 788.0
YYD3_k127_5958641_1 beta-galactosidase activity K01192 - 3.2.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 496.0
YYD3_k127_5964040_0 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000497 297.0
YYD3_k127_5964040_1 TIGRFAM dihydroorotate dehydrogenase family protein K00226,K17723 - 1.3.1.1,1.3.98.1 0.0000000000000000000000000007448 117.0
YYD3_k127_5964040_2 PFAM cyclase family protein - - - 0.000000000000000000000001506 112.0
YYD3_k127_5964040_3 4Fe-4S binding domain - - - 0.0000000005509 65.0
YYD3_k127_5971288_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 346.0
YYD3_k127_5971288_1 D-glycero-D-manno-heptose 7-phosphate metabolic process K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000007371 221.0
YYD3_k127_5971288_2 glucose phosphotransferase - - - 0.0000926 49.0
YYD3_k127_5976526_0 Tricorn protease C1 domain K08676 - - 9.758e-298 930.0
YYD3_k127_5976526_1 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 439.0
YYD3_k127_5979957_0 nuclear chromosome segregation K03529,K19171 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 372.0
YYD3_k127_5979957_1 L-methionine salvage from methylthioadenosine K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000006171 181.0
YYD3_k127_5979957_2 methyltransferase activity - - - 0.000000000000000000000000000000000000000000002743 167.0
YYD3_k127_5990412_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1029.0
YYD3_k127_5990412_1 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 395.0
YYD3_k127_5990412_2 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.000000000000000000000000000000000000000000000000003439 188.0
YYD3_k127_5990412_4 Belongs to the pirin family K06911 - - 0.000001438 50.0
YYD3_k127_6022021_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 555.0
YYD3_k127_6022021_1 GMC oxidoreductase K03333 - 1.1.3.6 0.0000000000008578 75.0
YYD3_k127_6028411_0 Glycosyl hydrolase family 47 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008958 533.0
YYD3_k127_6028411_3 spore germination K03298 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004947 270.0
YYD3_k127_6028411_4 PFAM periplasmic binding protein LacI transcriptional regulator K10439 - - 0.00000000000000000000000000000000000000001936 158.0
YYD3_k127_6028411_5 peptidyl-prolyl cis-trans isomerase activity K01802,K03770 - 5.2.1.8 0.00000001601 64.0
YYD3_k127_6030934_0 Domain of unknown function (DUF4139) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 307.0
YYD3_k127_6030934_1 SMART von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000003272 200.0
YYD3_k127_6040961_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01006 - 2.7.9.1 1.038e-216 681.0
YYD3_k127_6040961_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005763 516.0
YYD3_k127_6040961_2 Amino acid permease - - - 0.000001893 53.0
YYD3_k127_6057722_0 PFAM Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005825 519.0
YYD3_k127_6057722_1 response regulator, receiver - - - 0.00000000000000000000000003525 120.0
YYD3_k127_6057722_2 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00001225 51.0
YYD3_k127_6063033_0 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity K12583 GO:0000030,GO:0003674,GO:0003824,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0070085,GO:0071704,GO:0097502,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.00000000000000000000000000001049 133.0
YYD3_k127_6063033_1 polysaccharide deacetylase - - - 0.0000000000000000001298 100.0
YYD3_k127_6063033_2 glycosyl transferase group 1 - - - 0.00000000000000000464 97.0
YYD3_k127_6063033_3 Glycosyl transferase family 2 - - - 0.00000000000000001923 90.0
YYD3_k127_6063033_4 methyltransferase K00568 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016020,GO:0016740,GO:0016741,GO:0032259,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 2.1.1.222,2.1.1.64 0.000000000000005608 85.0
YYD3_k127_607021_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000679 593.0
YYD3_k127_607021_1 Uncharacterized protein family (UPF0051) K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000506 352.0
YYD3_k127_607021_2 iron-sulfur transferase activity K04488 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016740,GO:0016782,GO:0019538,GO:0019725,GO:0030003,GO:0036455,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071704,GO:0097428,GO:0098771,GO:1901564 - 0.00000000000000000000000000000000000000000000000000001493 192.0
YYD3_k127_6080642_0 Protein of unknown function (DUF1343) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 396.0
YYD3_k127_6080642_1 GGDEF domain K02478 - 2.7.13.3 0.00000000000000000000000000000000000000000001483 180.0
YYD3_k127_6080642_2 COG494 NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair General function prediction only K01515 - 3.6.1.13 0.00000000000000000000002326 103.0
YYD3_k127_6088111_0 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 427.0
YYD3_k127_6088111_1 Cytochrome b(N-terminal)/b6/petB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005964 367.0
YYD3_k127_6088111_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 332.0
YYD3_k127_6096312_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 1.216e-224 714.0
YYD3_k127_6096312_1 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005024 437.0
YYD3_k127_6096312_2 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003089 248.0
YYD3_k127_6096312_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000003511 220.0
YYD3_k127_6096312_4 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000004271 186.0
YYD3_k127_6096312_5 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000458 168.0
YYD3_k127_6096312_6 ankyrin repeats - - - 0.000000000000000000000000000000000000002273 151.0
YYD3_k127_6096312_7 2 iron, 2 sulfur cluster binding - - - 0.00000000000000000000000000000005581 130.0
YYD3_k127_6096312_8 Membrane - - - 0.000000000000000000000000000009143 123.0
YYD3_k127_6103709_0 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591,K13421 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.10,4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001139 277.0
YYD3_k127_6103709_1 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008041 264.0
YYD3_k127_6103709_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000002583 232.0
YYD3_k127_6103709_3 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000000000000000008003 158.0
YYD3_k127_6103709_4 N-terminal domain of toast_rack, DUF2154 - - - 0.000002203 59.0
YYD3_k127_6103709_5 CHAT domain - - - 0.00001472 55.0
YYD3_k127_6107133_0 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 1.618e-245 790.0
YYD3_k127_6107133_1 PFAM Aldehyde dehydrogenase K00294 - 1.2.1.88 1.382e-206 654.0
YYD3_k127_6107133_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K01876,K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.12,6.3.5.6,6.3.5.7 4.495e-194 617.0
YYD3_k127_6107133_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 571.0
YYD3_k127_6107133_4 triose-phosphate isomerase activity K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 308.0
YYD3_k127_6107133_5 N-acetylglucosamine kinase activity K00884 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006040,GO:0006044,GO:0006082,GO:0006793,GO:0006796,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0045127,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901071,GO:1901135,GO:1901265,GO:1901363 2.7.1.59 0.00000000000000000000000000000000000000000001789 174.0
YYD3_k127_6107133_6 Universal stress protein family - - - 0.000000000000000000000000002983 124.0
YYD3_k127_6107133_7 Belongs to the glycosyl hydrolase 2 family - - - 0.000000000000000008162 90.0
YYD3_k127_6111027_0 isoprenoid biosynthetic process K00805,K02523 GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009108,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0042180,GO:0042181,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901615,GO:1901617,GO:1901661,GO:1901663 2.5.1.30,2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000665 392.0
YYD3_k127_6111027_1 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000002269 235.0
YYD3_k127_6113376_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006725,GO:0006778,GO:0006779,GO:0006780,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019353,GO:0019438,GO:0019752,GO:0033013,GO:0033014,GO:0033526,GO:0034641,GO:0042168,GO:0042440,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046394,GO:0046483,GO:0046501,GO:0046502,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005526 416.0
YYD3_k127_6113376_1 glutamyl-tRNA reductase activity K02407,K02492 GO:0005575,GO:0005623,GO:0009288,GO:0042597,GO:0042995,GO:0043226,GO:0043228,GO:0044464,GO:0055040 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003808 393.0
YYD3_k127_6113376_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003019 315.0
YYD3_k127_6113376_3 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.0000000000000000000000000000000000000002175 160.0
YYD3_k127_6134931_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 6.381e-206 648.0
YYD3_k127_6134931_1 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000007406 211.0
YYD3_k127_6149425_0 Amino acid permease - - - 1.652e-196 630.0
YYD3_k127_6149425_1 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity K00057 GO:0003674,GO:0003824,GO:0004367,GO:0006072,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0019637,GO:0044237,GO:0046167,GO:0047952,GO:0052646,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901576 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 387.0
YYD3_k127_6149425_2 acyl-phosphate glycerol-3-phosphate acyltransferase activity K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000007004 262.0
YYD3_k127_6149425_3 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.00000000000000000000000000000000000000000000001239 180.0
YYD3_k127_6165188_0 Protein of unknown function (DUF2723) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 438.0
YYD3_k127_6165188_1 coproporphyrinogen oxidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 325.0
YYD3_k127_6165188_2 signal peptide processing K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000001378 188.0
YYD3_k127_6170180_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003792 396.0
YYD3_k127_6170180_1 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007713 271.0
YYD3_k127_6170180_2 transcriptional regulator, Rrf2 family - - - 0.000000000000000000000000000003483 123.0
YYD3_k127_6187825_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035597,GO:0035600,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050497,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:0090304,GO:1901360 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007008 571.0
YYD3_k127_6187825_1 phosphate acetyltransferase K00029,K00625,K13788 - 1.1.1.40,2.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 398.0
YYD3_k127_6187825_2 ABC-type Mn2 Zn2 transport systems permease components K02075,K09816 - - 0.000000000000000000000000000000000001381 149.0
YYD3_k127_6187825_3 COG1121 ABC-type Mn Zn transport systems ATPase component K11607,K11710 - - 0.00000000000000000000000000001301 121.0
YYD3_k127_6187825_4 peptidoglycan binding K03749,K07114,K08300,K09859 - 3.1.26.12 0.0004688 46.0
YYD3_k127_6190427_0 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 415.0
YYD3_k127_6190427_1 amine dehydrogenase activity - - - 0.000000000001237 74.0
YYD3_k127_6214406_0 Acyl transferase domain in polyketide synthase (PKS) enzymes. - - - 0.0 1067.0
YYD3_k127_6214406_1 Amino acid adenylation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 580.0
YYD3_k127_6214406_2 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000000000000000000000000000000000000000000000007709 198.0
YYD3_k127_6216592_0 Chase2 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004404 452.0
YYD3_k127_6216592_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007517 373.0
YYD3_k127_6216592_2 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K05827,K05844 - 6.3.2.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 311.0
YYD3_k127_6216592_3 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000003751 237.0
YYD3_k127_6228050_0 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000001445 244.0
YYD3_k127_6228050_1 phosphoenolpyruvate carboxykinase (ATP) activity K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 0.000000000000000000000000000000001682 131.0
YYD3_k127_6228050_2 Subtilase family - - - 0.000000000000000005196 96.0
YYD3_k127_6233781_0 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843 - - 0.0000000000000000000000000000000000000000000000000000001847 215.0
YYD3_k127_6233781_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000001932 134.0
YYD3_k127_6233781_2 Cytochrome c - - - 0.00000000000001631 84.0
YYD3_k127_6233993_0 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005864 300.0
YYD3_k127_6233993_1 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 291.0
YYD3_k127_6233993_2 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001031 261.0
YYD3_k127_6241976_0 Aldehyde dehydrogenase family K00130 - 1.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 353.0
YYD3_k127_6241976_1 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 304.0
YYD3_k127_6253276_0 cytokinin biosynthetic process K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004154 304.0
YYD3_k127_6253276_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016020,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000007765 240.0
YYD3_k127_6253276_2 Diacylglycerol kinase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000001973 211.0
YYD3_k127_6262114_0 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 563.0
YYD3_k127_6262114_1 ligase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005507 452.0
YYD3_k127_6262114_2 aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 443.0
YYD3_k127_6262114_3 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007486 443.0
YYD3_k127_6262114_4 M6 family metalloprotease domain protein - - - 0.00000000000000000000000000000000000000000000000000000000687 207.0
YYD3_k127_6273544_0 MacB-like periplasmic core domain K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004046 354.0
YYD3_k127_6273544_1 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003744 312.0
YYD3_k127_6273544_2 transcriptional regulator - - - 0.0000000000001075 79.0
YYD3_k127_6273544_3 Thioredoxin-like - - - 0.0001545 47.0
YYD3_k127_6281966_0 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008795 417.0
YYD3_k127_6281966_1 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.0000000000000000000000000000000000000000000000000000000000009994 215.0
YYD3_k127_6281966_2 PspC domain K03973 - - 0.00000000000003419 74.0
YYD3_k127_6284059_0 ADP-glyceromanno-heptose 6-epimerase activity K01710,K08678 - 4.1.1.35,4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 496.0
YYD3_k127_6284059_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000365 136.0
YYD3_k127_6284059_2 Predicted periplasmic lipoprotein (DUF2279) - - - 0.00000000001683 72.0
YYD3_k127_6284518_0 glutamine-fructose-6-phosphate transaminase (isomerizing) activity K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 2.053e-259 812.0
YYD3_k127_6284518_1 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005141 301.0
YYD3_k127_6284518_2 Belongs to the multicopper oxidase YfiH RL5 family K05810 GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016679,GO:0016682,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0046983,GO:0055114 - 0.000000000000000000000000000000000000000000000001403 182.0
YYD3_k127_6287400_0 COGs COG4299 conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 401.0
YYD3_k127_6287400_1 glucosamine-6-phosphate deaminase activity K01057,K02564 - 3.1.1.31,3.5.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009669 360.0
YYD3_k127_6296926_0 Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 348.0
YYD3_k127_6296926_1 protein secretion K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000001043 240.0
YYD3_k127_6296926_2 ABC transporter K01990 - - 0.0000000002217 73.0
YYD3_k127_6302530_0 iron-nicotianamine transmembrane transporter activity - - - 6.607e-279 871.0
YYD3_k127_6302530_1 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 402.0
YYD3_k127_6302530_2 Peptidase family M49 - - - 0.00000000000000000000000000000000001082 143.0
YYD3_k127_6302530_3 - - - - 0.000000000000000000006986 92.0
YYD3_k127_630723_0 PFAM Phenylalanine and histidine ammonia-lyase K01745,K10775 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009072,GO:0009698,GO:0009699,GO:0009800,GO:0009803,GO:0009987,GO:0016043,GO:0016053,GO:0016829,GO:0016840,GO:0016841,GO:0019438,GO:0019748,GO:0019752,GO:0022607,GO:0032787,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044550,GO:0045548,GO:0046394,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 4.3.1.24,4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 327.0
YYD3_k127_630723_1 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 309.0
YYD3_k127_630723_2 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000001009 224.0
YYD3_k127_630723_3 PFAM cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000001353 212.0
YYD3_k127_630723_4 to Modification methylase in Methanococcus jannaschii (Q58392) and Methanobacterium thermoformicicum (P29568) K00571,K00590 - 2.1.1.113,2.1.1.72 0.0000272 48.0
YYD3_k127_6308629_0 major pilin protein fima - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 390.0
YYD3_k127_6308629_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 385.0
YYD3_k127_6308629_2 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007642 361.0
YYD3_k127_6308629_3 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006097 313.0
YYD3_k127_6308629_4 DinB family - - - 0.0000000000000000000000000000000000000000000000000000001359 199.0
YYD3_k127_6308629_5 - - - - 0.0000000000000000000000000000000000413 139.0
YYD3_k127_6308629_6 Spore coat protein CotH K06330 - - 0.00000000000000000000000000000005353 140.0
YYD3_k127_6308629_7 Oligoendopeptidase f K01283,K08602 - 3.4.15.1 0.0000000000000000000000004726 112.0
YYD3_k127_6308629_9 - - - - 0.00000006877 57.0
YYD3_k127_6312535_0 DEAD/H associated K03724 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005226 254.0
YYD3_k127_6312535_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000001714 223.0
YYD3_k127_6322706_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 9.738e-264 830.0
YYD3_k127_6322706_1 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006606 554.0
YYD3_k127_6322706_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008036 528.0
YYD3_k127_6322706_3 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000002379 235.0
YYD3_k127_6322706_4 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000007204 184.0
YYD3_k127_6322762_0 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003985 278.0
YYD3_k127_6322762_1 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K01870 - 6.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000659 219.0
YYD3_k127_6322762_2 Uncharacterized protein conserved in bacteria (DUF2087) - - - 0.00000000000000000000000000000000000000000000007397 173.0
YYD3_k127_6322762_3 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000002245 172.0
YYD3_k127_6322762_4 Thioesterase K07107 - - 0.00000000000000000000000000000000000000000001011 168.0
YYD3_k127_6327193_0 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 478.0
YYD3_k127_6327193_1 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000564 451.0
YYD3_k127_6327193_10 PFAM Phenylacetic acid degradation B K02610 - - 0.0000000000000000003428 91.0
YYD3_k127_6327193_2 Monogalactosyldiacylglycerol (MGDG) synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 411.0
YYD3_k127_6327193_3 With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA K02609 - 1.14.13.149 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007509 348.0
YYD3_k127_6327193_4 DNA-3-methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006863 288.0
YYD3_k127_6327193_5 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002487 257.0
YYD3_k127_6327193_6 Phenylacetate-CoA oxygenase K02611 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000001516 237.0
YYD3_k127_6327193_7 TIGRFAM phenylacetate-CoA oxygenase, PaaJ subunit K02612 - - 0.0000000000000000000000000000000000000001166 163.0
YYD3_k127_6327193_8 Protein conserved in bacteria K01153 - 3.1.21.3 0.000000000000000000000000000536 125.0
YYD3_k127_6327193_9 Cytochrome c - - - 0.000000000000000000002347 100.0
YYD3_k127_6330517_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 547.0
YYD3_k127_6330517_1 Esterase PHB depolymerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 335.0
YYD3_k127_6330517_2 - - - - 0.000001808 57.0
YYD3_k127_6332122_0 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 307.0
YYD3_k127_6332122_1 protein trimerization - - - 0.0000000000000000000000001845 111.0
YYD3_k127_6336281_0 Dehydrogenase K00248,K00249,K20035 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016627,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050662,GO:0052890,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.3.8.1,1.3.8.7 1.032e-244 765.0
YYD3_k127_6336281_1 Electron transfer flavoprotein K03522,K22432 - 1.3.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 496.0
YYD3_k127_6336281_2 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003979 407.0
YYD3_k127_6336281_3 PFAM alpha amylase, catalytic region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 392.0
YYD3_k127_6336281_4 maltose binding K15770,K15771 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005319 387.0
YYD3_k127_6336281_5 Binding-protein-dependent transport system inner membrane component K02025,K15770,K15771 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008849 359.0
YYD3_k127_6336281_6 Binding-protein-dependent transport system inner membrane component K15772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 345.0
YYD3_k127_6340312_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 2.913e-196 620.0
YYD3_k127_6340312_1 cell envelope organization K05807,K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000001459 240.0
YYD3_k127_6340312_2 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000000000000000000002676 224.0
YYD3_k127_6340312_3 acyl-coa hydrolase K01073 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006629,GO:0006631,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016289,GO:0016787,GO:0016788,GO:0016790,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0047617,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 3.1.2.20 0.00000000000000000000000000000000000000000000000000000001214 203.0
YYD3_k127_6346658_0 Phosphotransferase system HPr (HPr) family protein K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000958 209.0
YYD3_k127_6346658_1 ATP-dependent DNA helicase activity K01144,K07464,K16898 - 3.1.11.5,3.1.12.1,3.6.4.12 0.000000000000000000000000000000002085 146.0
YYD3_k127_6358018_0 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 474.0
YYD3_k127_6358018_1 PHP domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 401.0
YYD3_k127_6358018_2 Outer membrane lipoprotein - - - 0.0000000000000000000000000000000000000000000003898 193.0
YYD3_k127_6358018_4 - - - - 0.00001384 57.0
YYD3_k127_6362429_0 protein-(glutamine-N5) methyltransferase activity K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000009556 232.0
YYD3_k127_6362429_1 D-aminoacyl-tRNA deacylase activity K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106026,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000000003178 183.0
YYD3_k127_6362429_2 Arabinose efflux permease family protein - - - 0.00000000000000000000000000001831 129.0
YYD3_k127_6362429_3 phosphopentomutase activity - - - 0.000000000000000000000000121 110.0
YYD3_k127_6370024_1 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000006065 166.0
YYD3_k127_6381982_0 Belongs to the arylamine N-acetyltransferase family K00675 - 2.3.1.118 0.000000000000000000000000000000000000000000000000000000000000000000001823 243.0
YYD3_k127_6381982_1 Putative FMN-binding domain K07734 - - 0.000000000000000000000000000000000000000000000000000000002738 205.0
YYD3_k127_6381982_2 Carboxypeptidase regulatory-like domain - - - 0.000000000001713 74.0
YYD3_k127_6381982_3 - - - - 0.00000000004652 74.0
YYD3_k127_6381982_4 YCII-related domain - - - 0.000008741 49.0
YYD3_k127_6381982_5 enterobactin catabolic process K07214 - - 0.0002061 44.0
YYD3_k127_6384134_0 polyribonucleotide nucleotidyltransferase activity K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 5.96e-226 715.0
YYD3_k127_6384134_1 Bacillithiol biosynthesis BshC K22136 - - 0.0000000000003939 72.0
YYD3_k127_6390784_0 TonB-dependent receptor - - - 1.496e-284 900.0
YYD3_k127_6390784_1 ATPase activity K10112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 392.0
YYD3_k127_6390784_2 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 363.0
YYD3_k127_6390784_3 helix_turn _helix lactose operon repressor K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003841 307.0
YYD3_k127_6392523_0 Heparinase II/III-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003634 614.0
YYD3_k127_6392523_1 oxidoreductase - - - 0.00000000000000000000000000000000000000148 160.0
YYD3_k127_6392523_2 converts alpha-aldose to the beta-anomer - - - 0.000000000000000000000000000001577 125.0
YYD3_k127_6399_0 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 4.341e-262 834.0
YYD3_k127_6399_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 520.0
YYD3_k127_6406549_0 Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 548.0
YYD3_k127_6406549_1 4 iron, 4 sulfur cluster binding K00184 - - 0.0000000000000000000000000000000000000000000000001386 179.0
YYD3_k127_6416264_0 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.2.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 360.0
YYD3_k127_6416264_1 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 355.0
YYD3_k127_6416264_2 inositol 2-dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 338.0
YYD3_k127_6416264_3 PFAM deoxyribose-phosphate aldolase phospho-2-dehydro-3-deoxyheptonate aldolase K11645 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000006213 258.0
YYD3_k127_6416264_4 Fumarylacetoacetate (FAA) hydrolase K01826 - 5.3.3.10 0.0000000000000000000000000000000000000000000000000000000000000000557 233.0
YYD3_k127_6416264_5 Phosphomannose isomerase type I - - - 0.00000000000000000000000000000000000000000000000000000000000001925 228.0
YYD3_k127_6416264_6 Protein of unknown function (DUF455) K11529 - 2.7.1.165 0.000000000000000000009794 105.0
YYD3_k127_6416264_7 Alpha-mannosidase K01191 - 3.2.1.24 0.000007971 50.0
YYD3_k127_6422704_0 HELICc2 K03722 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000006864 258.0
YYD3_k127_6422704_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007636 266.0
YYD3_k127_6422704_2 regulation of translation K03530 - - 0.00000000000000000000000002979 111.0
YYD3_k127_6429575_0 Pfam:PNPOx_C K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000000000000007321 237.0
YYD3_k127_6429575_1 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000003181 144.0
YYD3_k127_6429575_2 PFAM Thioredoxin domain K05838 - - 0.00000000000000000001176 92.0
YYD3_k127_6429575_3 VanZ like family - - - 0.0000006835 61.0
YYD3_k127_6436907_0 transport - - - 6.364e-245 775.0
YYD3_k127_6436907_1 3-isopropylmalate dehydratase activity K01703 - 4.2.1.33,4.2.1.35 3.243e-215 675.0
YYD3_k127_6436907_2 coproporphyrinogen oxidase activity K02495 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.98.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 590.0
YYD3_k127_6436907_3 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 568.0
YYD3_k127_6436907_4 carboxylic acid catabolic process K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005546 483.0
YYD3_k127_6436907_5 cysteine-type peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007904 366.0
YYD3_k127_6436907_6 3-isopropylmalate dehydratase activity K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000002477 227.0
YYD3_k127_6436907_7 response to oxidative stress K04063 - - 0.0000000000000000000000000000003324 127.0
YYD3_k127_6478002_0 succinyl-diaminopimelate desuccinylase activity K01436,K01438,K01439 - 3.5.1.16,3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 431.0
YYD3_k127_6478002_1 tRNA synthetase class II K01892 - 6.1.1.21 0.0000000000000000000000000000000000000001896 153.0
YYD3_k127_6488935_1 - - - - 0.000000000000000000000000000001178 128.0
YYD3_k127_6488935_2 Aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000004887 113.0
YYD3_k127_6491547_0 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K18930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003301 506.0
YYD3_k127_6491547_1 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004969 408.0
YYD3_k127_6491547_2 nUDIX hydrolase K01515,K08310 - 3.6.1.13,3.6.1.67 0.00000000000000000000000000000001861 132.0
YYD3_k127_650272_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006211 599.0
YYD3_k127_650272_1 bacterial-type flagellum-dependent cell motility - - - 0.00000000000000000000000000000000000000000000000000000000005216 222.0
YYD3_k127_650272_2 Polynucleotide kinase 3 phosphatase - - - 0.0000000000000000000000000000000000000000000000002287 188.0
YYD3_k127_6513330_0 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008267 454.0
YYD3_k127_6513330_1 spore germination - - - 0.0000000000000000000000000000000000000000000000000007043 194.0
YYD3_k127_6530004_0 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001127 250.0
YYD3_k127_6530004_1 PFAM Bacterial capsule synthesis protein PGA_cap K07282 - - 0.000000000000000000000000000000000000000000000002433 179.0
YYD3_k127_6530004_2 TPM domain K06872 - - 0.000000000000000000000000000000000000000000000202 176.0
YYD3_k127_654872_0 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.00000000000000000000000000000003902 136.0
YYD3_k127_654872_1 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K02275 - 1.9.3.1 0.00000000000000000000003166 106.0
YYD3_k127_654872_2 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.000000000008435 70.0
YYD3_k127_6573725_0 acetate kinase activity K00925 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006027 563.0
YYD3_k127_6573725_1 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004137 396.0
YYD3_k127_6573725_2 Domain of unknown function (DUF1949) - - - 0.00000000000000000000000000000000000000005088 156.0
YYD3_k127_6573725_3 ABC-2 family transporter protein - - - 0.0002533 49.0
YYD3_k127_6582611_0 helicase activity K03579 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000111 208.0
YYD3_k127_6582611_1 Protein of unknown function (DUF2721) - - - 0.000000000000000000000000002174 117.0
YYD3_k127_6582611_2 - - - - 0.000000000000000008566 88.0
YYD3_k127_6582611_3 - - - - 0.00000000003266 66.0
YYD3_k127_6582611_4 - - - - 0.000000000189 70.0
YYD3_k127_6608134_0 Highly conserved protein containing a thioredoxin domain - - - 0.0000000000000000005476 98.0
YYD3_k127_6608134_2 O-Antigen ligase K16705 - - 0.00001562 57.0
YYD3_k127_6621136_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 2.86e-277 859.0
YYD3_k127_6621136_1 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000004918 160.0
YYD3_k127_6625976_0 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 396.0
YYD3_k127_6625976_1 Belongs to the peptidase S8 family - - - 0.0000000000000000000000205 114.0
YYD3_k127_6652642_0 Gaf domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001744 256.0
YYD3_k127_6652642_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000002106 192.0
YYD3_k127_6652642_2 rRNA processing K07056 - 2.1.1.198 0.000000000000000000000000009699 113.0
YYD3_k127_6661341_0 Aminotransferase class I and II K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003646 480.0
YYD3_k127_6661341_1 PFAM Rhomboid family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000002238 233.0
YYD3_k127_6667675_0 Protein conserved in bacteria - - - 0.0000000000000000000000000004437 115.0
YYD3_k127_6667675_1 domain protein - - - 0.00001079 57.0
YYD3_k127_6683017_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821,K03918,K07250,K13524 - 2.6.1.11,2.6.1.17,2.6.1.19,2.6.1.22,2.6.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 550.0
YYD3_k127_6683017_1 Belongs to the aldehyde dehydrogenase family K00140,K22187 - 1.2.1.18,1.2.1.27 0.00000000000000000000009719 97.0
YYD3_k127_6686413_0 Highly conserved protein containing a thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 353.0
YYD3_k127_6686413_1 Alcohol dehydrogenase GroES domain protein K00004 - 1.1.1.303,1.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 305.0
YYD3_k127_6686413_2 cellulase activity K01361,K20276 - 3.4.21.96 0.00000000000000001063 86.0
YYD3_k127_6687238_0 Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008913 604.0
YYD3_k127_6687238_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007165 297.0
YYD3_k127_6687238_2 molybdopterin cofactor binding - - - 0.000008954 52.0
YYD3_k127_6707704_0 Glycoside hydrolase family 38 central region K01191 - 3.2.1.24 2.735e-230 750.0
YYD3_k127_6707704_1 Peptidase M1 - - - 6.909e-196 626.0
YYD3_k127_6707704_2 ABC-type sugar transport system, ATPase component K10441 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 461.0
YYD3_k127_6707704_3 Belongs to the DapA family K21062 - 3.5.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 370.0
YYD3_k127_6707704_4 Belongs to the binding-protein-dependent transport system permease family K10440 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 299.0
YYD3_k127_6707704_5 belongs to the aldehyde dehydrogenase family K22187 - - 0.0000000000000000000000000000000000000000000000000000000001459 211.0
YYD3_k127_6707704_6 PFAM periplasmic binding protein LacI transcriptional regulator K10439 - - 0.00000000000000000000000000000000000006387 148.0
YYD3_k127_6707704_7 Transposase IS200 like - - - 0.00000000000000000000000000002465 123.0
YYD3_k127_6707704_8 - - - - 0.00000000000000000000009482 102.0
YYD3_k127_672046_0 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 379.0
YYD3_k127_672046_1 extracellular matrix structural constituent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 349.0
YYD3_k127_672046_2 nucleotide catabolic process K05996 - 3.4.17.18 0.000000000002639 81.0
YYD3_k127_6728912_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1077.0
YYD3_k127_6728912_1 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000004763 211.0
YYD3_k127_6728912_2 (ABC) transporter K02021,K06147,K06148,K11085 - - 0.00000000000000000009652 93.0
YYD3_k127_6728912_3 Belongs to the 'phage' integrase family K03733 - - 0.0000000002506 64.0
YYD3_k127_6800357_0 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002572 395.0
YYD3_k127_6800357_1 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000028,GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070475,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140102,GO:1901360,GO:1901363 2.1.1.182 0.0000000000000000000000000000000000000000000000000000001558 204.0
YYD3_k127_6800357_2 AsmA-like C-terminal region - - - 0.0000000000000000000000000000000000001403 164.0
YYD3_k127_6800357_3 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000191 135.0
YYD3_k127_6800357_4 phosphatidate phosphatase activity - - - 0.000000000000000000451 92.0
YYD3_k127_6810984_0 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009665 354.0
YYD3_k127_6810984_1 beta-galactosidase activity K01190 - 3.2.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005612 304.0
YYD3_k127_6817451_0 PFAM aminotransferase class V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 563.0
YYD3_k127_6817451_1 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007253 498.0
YYD3_k127_6817451_2 RNA polymerase activity K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 422.0
YYD3_k127_6817451_3 rRNA binding K02986 GO:0000028,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006417,GO:0006446,GO:0006450,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0015935,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030371,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031554,GO:0031564,GO:0032268,GO:0032269,GO:0032270,GO:0032991,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045727,GO:0045903,GO:0045947,GO:0048027,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990145,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005733 332.0
YYD3_k127_6817451_4 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000000000000001317 206.0
YYD3_k127_6817451_5 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000006853 137.0
YYD3_k127_6818367_0 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001075 259.0
YYD3_k127_6818367_1 Protein of unknown function (DUF3455) - - - 0.0000000000000000000000000000000000004967 147.0
YYD3_k127_6818367_2 Y_Y_Y domain - - - 0.00000000000000000768 89.0
YYD3_k127_6818367_3 ABC transporter K01990 - - 0.00000000000001008 85.0
YYD3_k127_6820330_0 lipopolysaccharide transport - - - 5.477e-211 687.0
YYD3_k127_6820330_1 PFAM AAA ATPase central domain protein K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002773 499.0
YYD3_k127_6820330_2 Methylenetetrahydrofolate reductase K00297,K00547,K00548 - 1.5.1.20,2.1.1.10,2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 436.0
YYD3_k127_6820330_3 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 426.0
YYD3_k127_6820330_4 PFAM Class II aldolase adducin K01628 - 4.1.2.17 0.0000000000000000000000000000000000000000000000000000004477 203.0
YYD3_k127_6820330_5 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.0000000000000000000000000003467 115.0
YYD3_k127_6820330_6 ORF6N domain - - - 0.0000000000000000000000000008781 115.0
YYD3_k127_6820330_7 cell cycle K05589,K12065,K13052 - - 0.000008054 52.0
YYD3_k127_6820330_8 ORF6N domain - - - 0.00002741 48.0
YYD3_k127_6833995_0 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 467.0
YYD3_k127_6833995_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 383.0
YYD3_k127_6833995_2 - - - - 0.000000000000000000000000000000000000000001287 164.0
YYD3_k127_6833995_3 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 0.0000000000000000005004 89.0
YYD3_k127_6863807_0 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 448.0
YYD3_k127_6863807_1 Deoxycytidine triphosphate deaminase K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005677 287.0
YYD3_k127_6863807_2 Penicillin binding protein transpeptidase domain K17838 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003434 281.0
YYD3_k127_6863807_3 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.00000000000000000005519 91.0
YYD3_k127_686560_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 486.0
YYD3_k127_686560_1 LVIVD repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000002248 239.0
YYD3_k127_686560_2 - - - - 0.00000000000000000001328 93.0
YYD3_k127_6867246_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 518.0
YYD3_k127_6867246_1 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008484 322.0
YYD3_k127_6877093_0 phosphorelay signal transduction system K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003914 574.0
YYD3_k127_6877093_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007276 438.0
YYD3_k127_6877093_2 formate dehydrogenase - - - 0.00000000000000000000000000000000000000371 153.0
YYD3_k127_6877093_3 AMP binding - - - 0.000000000000000000000000002357 119.0
YYD3_k127_6877093_4 phosphorelay signal transduction system - - - 0.000000000000000002174 90.0
YYD3_k127_6877093_5 Bacterial protein of unknown function (DUF853) K06915 - - 0.000000004149 59.0
YYD3_k127_6877093_6 - - - - 0.0000002637 54.0
YYD3_k127_6877175_0 proton-transporting ATP synthase activity, rotational mechanism K02112 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 8.933e-251 779.0
YYD3_k127_6877175_1 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.000000000000000000000000000000000001049 142.0
YYD3_k127_6877175_2 proton-transporting ATP synthase activity, rotational mechanism K02114 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000008698 55.0
YYD3_k127_6884580_0 Prokaryotic cytochrome b561 - - - 1.434e-254 801.0
YYD3_k127_6884580_1 formate dehydrogenase - - - 1.275e-205 653.0
YYD3_k127_6884580_2 denitrification pathway K15876 GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0044237,GO:0044425,GO:0045333,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003457 600.0
YYD3_k127_6884580_3 Cytochrome b(N-terminal)/b6/petB K00410,K00412,K02635,K02637 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 455.0
YYD3_k127_6884580_4 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 370.0
YYD3_k127_6884580_5 Cytochrome c554 and c-prime K03620 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 314.0
YYD3_k127_6884580_6 Rieske [2Fe-2S] domain K00411,K02636,K03886 - 1.10.2.2,1.10.9.1 0.000000000000000000000000000000000000000000000009281 175.0
YYD3_k127_693832_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003695 567.0
YYD3_k127_70310_0 serine-type D-Ala-D-Ala carboxypeptidase activity K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000001479 260.0
YYD3_k127_70310_1 cellulose binding - - - 0.0000000000000000002042 95.0
YYD3_k127_705179_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000538 592.0
YYD3_k127_711448_0 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 4.307e-255 812.0
YYD3_k127_711448_1 ATPases associated with a variety of cellular activities K10112,K10195 - - 0.000000000000000000000002342 107.0
YYD3_k127_711448_2 TIGRFAM TonB family protein K03832 - - 0.0000000008575 71.0
YYD3_k127_719113_0 Two component transcriptional regulator, winged helix family K02483 - - 0.00000000000000000000000000000000000000000000000002903 185.0
YYD3_k127_719113_1 Adenylate cyclase - - - 0.00000000000000000000000000003625 128.0
YYD3_k127_719113_2 Transcriptional regulatory protein, C terminal K07658,K07668 - - 0.0000000000000000000000000001235 126.0
YYD3_k127_719113_3 phosphorelay sensor kinase activity K02484,K07644,K07653 - 2.7.13.3 0.00000000000000000000001007 106.0
YYD3_k127_722924_0 Membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009411 269.0
YYD3_k127_722924_1 IrrE N-terminal-like domain - - - 0.00000000131 65.0
YYD3_k127_722924_2 DNA-templated transcription, initiation K03088 - - 0.0003713 51.0
YYD3_k127_724069_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 438.0
YYD3_k127_724069_1 metalloendopeptidase activity K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 438.0
YYD3_k127_724069_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 440.0
YYD3_k127_724069_3 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000009416 179.0
YYD3_k127_724069_4 FecR protein - - - 0.000000000000000000000000000007281 128.0
YYD3_k127_724069_5 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000002849 96.0
YYD3_k127_724069_6 - - - - 0.000000003972 68.0
YYD3_k127_746051_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 2.26e-216 682.0
YYD3_k127_755236_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009011 278.0
YYD3_k127_755622_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000003437 189.0
YYD3_k127_755622_1 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000782 89.0
YYD3_k127_810594_0 peptide catabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 440.0
YYD3_k127_810594_1 Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.000000000000000000000000000000000000000000001751 168.0
YYD3_k127_810594_2 spore germination K07790 - - 0.0000000000000008811 79.0
YYD3_k127_815874_0 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity K02372,K02535,K13599,K16363 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0019171 3.5.1.108,4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005965 490.0
YYD3_k127_815874_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000042 349.0
YYD3_k127_815874_2 unfolded protein binding K06142 - - 0.0000000000000000000000000000000000000000000000007502 180.0
YYD3_k127_815874_3 membrane organization K07277 GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.000000001158 59.0
YYD3_k127_815874_4 Outer membrane protein (OmpH-like) K06142 - - 0.000000244 60.0
YYD3_k127_816863_0 binding-protein-dependent transport systems inner membrane component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004056 359.0
YYD3_k127_816863_1 binding-protein-dependent transport systems inner membrane component K02025,K10241,K15771 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 308.0
YYD3_k127_816863_2 Glycogen debranching enzyme - - - 0.0000000000000001319 91.0
YYD3_k127_816863_3 PPIC-type PPIASE domain K03769,K03771 - 5.2.1.8 0.0000004908 63.0
YYD3_k127_818954_0 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000002008 188.0
YYD3_k127_818954_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000001038 60.0
YYD3_k127_818954_2 CHAT domain - - - 0.00005024 56.0
YYD3_k127_85918_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 369.0
YYD3_k127_85918_1 ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004174 365.0
YYD3_k127_863465_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 3.436e-293 914.0
YYD3_k127_863465_1 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760,K00939,K15780 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.2.8,2.7.4.3,6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000002926 228.0
YYD3_k127_863465_2 dolichyl monophosphate biosynthetic process K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000007941 226.0
YYD3_k127_863465_3 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00009277 45.0
YYD3_k127_874156_0 Gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 414.0
YYD3_k127_874156_1 - K21449 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 316.0
YYD3_k127_874156_2 - K21449 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002915 265.0
YYD3_k127_874156_3 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000004727 173.0
YYD3_k127_874156_4 amine dehydrogenase activity - - - 0.00000000000000000000000000000000003856 146.0
YYD3_k127_874156_5 cellulose binding - - - 0.0000000000000000000000171 116.0
YYD3_k127_879618_0 microcin C7 resistance K01297 - 3.4.17.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001316 280.0
YYD3_k127_879618_1 Dipeptidase K01270 - - 0.00000000000000000000000000000000000000000000000000000000000000005876 239.0
YYD3_k127_879618_2 Signal peptidase (SPase) II - - - 0.00000000000000000000000000000004663 136.0
YYD3_k127_894064_0 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 445.0
YYD3_k127_894064_1 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000002287 216.0
YYD3_k127_894064_2 LVIVD repeat K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000002296 185.0
YYD3_k127_896638_0 DEAD DEAH box helicase K03724 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002781 264.0
YYD3_k127_896638_1 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000003634 124.0
YYD3_k127_899995_0 Molydopterin dinucleotide binding domain K08352 - 1.8.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 582.0
YYD3_k127_899995_1 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000003578 158.0
YYD3_k127_899995_2 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000001378 109.0
YYD3_k127_911357_0 membrane organization K03641,K07277 - - 2.745e-243 775.0
YYD3_k127_911357_1 histidine kinase, HAMP K07642 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000001546 273.0
YYD3_k127_918316_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002708 503.0
YYD3_k127_918316_1 PFAM Methionine synthase, vitamin-B12 independent K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000002372 254.0
YYD3_k127_918316_2 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000369 177.0
YYD3_k127_918316_3 Glycogen debranching enzyme - - - 0.000000000000000000000000000000000000009664 150.0
YYD3_k127_918316_4 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.000000000000000002754 94.0
YYD3_k127_918316_5 - - - - 0.000003989 49.0
YYD3_k127_92003_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004404 385.0
YYD3_k127_92003_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003485 374.0
YYD3_k127_92003_2 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002081 276.0
YYD3_k127_92003_3 Belongs to the enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000007279 265.0
YYD3_k127_92003_4 purine ribonucleoside salvage K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000009449 245.0
YYD3_k127_92003_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000004074 160.0
YYD3_k127_92003_6 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000007941 115.0
YYD3_k127_920721_0 acetyltransferase K11206 - - 1.022e-234 736.0
YYD3_k127_920721_1 Major facilitator Superfamily K08162,K08226,K16211 - - 0.000000000000000000000000000000000000000000002854 168.0
YYD3_k127_920721_2 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000006736 106.0
YYD3_k127_922193_0 GntR family K05799 - - 0.000000000000000000000000000000000000000000000000000000000000001477 226.0
YYD3_k127_922193_1 cellulose binding - - - 0.00000000000000000000000000000000000000008957 173.0
YYD3_k127_922193_2 Alpha-2-macroglobulin family - - - 0.00000000000000000000000000000000001173 136.0
YYD3_k127_922193_3 TonB-dependent receptor - - - 0.000000000000001048 83.0
YYD3_k127_925074_0 transmembrane transport K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 307.0
YYD3_k127_925074_1 ATP synthesis coupled electron transport K00340,K05576 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000000000000002705 138.0
YYD3_k127_925074_2 Belongs to the complex I subunit 6 family K00339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000007137 128.0
YYD3_k127_925074_3 ABC transporter K01990 - - 0.0000000000000002369 81.0
YYD3_k127_925074_4 NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.0000005539 52.0
YYD3_k127_947945_0 unfolded protein binding K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004908 321.0
YYD3_k127_947945_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005851 293.0
YYD3_k127_947945_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000001293 181.0
YYD3_k127_949651_0 allophanate hydrolase subunit 2 K01941,K06350 - 6.3.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 431.0
YYD3_k127_956488_0 serine-type D-Ala-D-Ala carboxypeptidase activity K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003279 500.0
YYD3_k127_956488_1 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 475.0
YYD3_k127_956488_2 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000002602 237.0
YYD3_k127_956488_3 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000005311 143.0
YYD3_k127_963068_0 glutaminyl-tRNA synthetase K01886 - 6.1.1.18 1.009e-277 862.0
YYD3_k127_963068_1 Deoxynucleoside kinase K15518 - 2.7.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000008432 265.0
YYD3_k127_963068_2 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950,K13940 - 2.7.6.3,4.1.2.25 0.0000000000000000000000000000000000001956 147.0
YYD3_k127_963068_3 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000001091 142.0
YYD3_k127_963068_4 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02841,K02843,K12982 - - 0.0000000009727 62.0
YYD3_k127_976571_0 NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 3.863e-248 778.0
YYD3_k127_976571_1 NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000634 524.0
YYD3_k127_97740_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00003,K00970,K00974,K00982,K00990,K06950,K15371 - 1.1.1.3,1.4.1.2,2.7.7.19,2.7.7.42,2.7.7.59,2.7.7.72,2.7.7.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005996 512.0
YYD3_k127_97740_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 293.0
YYD3_k127_97740_2 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000001931 94.0
YYD3_k127_978125_0 histone H2A K63-linked ubiquitination - - - 0.0000001398 63.0
YYD3_k127_978125_1 histone H2A K63-linked ubiquitination K01768 - 4.6.1.1 0.0000132 58.0
YYD3_k127_978125_2 PFAM Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000303 57.0
YYD3_k127_988766_0 nucleotide-excision repair K03701 - - 4.225e-213 673.0
YYD3_k127_989235_0 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000006658 229.0
YYD3_k127_989235_1 ligase activity, forming carbon-carbon bonds K00627,K01571,K02160 - 2.3.1.12,4.1.1.3 0.000000000000000000000000000000000002493 143.0
YYD3_k127_989235_2 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000002765 93.0
YYD3_k127_989235_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000006255 74.0
YYD3_k127_989235_4 cytochrome p450 K15468 - - 0.00000027 51.0
YYD3_k127_991573_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 2.074e-205 657.0
YYD3_k127_991573_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000003739 145.0
YYD3_k127_993037_0 Putative modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006888 389.0
YYD3_k127_993037_1 AMP binding - - - 0.0000000000000000000000000000000000000000275 159.0
YYD3_k127_999018_0 single-stranded DNA 5'-3' exodeoxyribonuclease activity K07462 - - 7.208e-195 623.0
YYD3_k127_999018_1 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000001089 160.0
YYD3_k127_999018_2 tRNA (adenine(22)-N(1))-methyltransferase K06967 - 2.1.1.217 0.00000000000000000000001457 102.0
YYD3_k127_999018_3 - - - - 0.0000006007 57.0